BLASTX nr result

ID: Paeonia23_contig00024840 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00024840
         (305 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containi...    64   2e-08
emb|CBI36131.3| unnamed protein product [Vitis vinifera]               64   2e-08
ref|XP_004235427.1| PREDICTED: pentatricopeptide repeat-containi...    59   7e-07
ref|XP_006361605.1| PREDICTED: pentatricopeptide repeat-containi...    56   5e-06

>ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 648

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 47/105 (44%), Positives = 60/105 (57%), Gaps = 6/105 (5%)
 Frame = -3

Query: 297 KVKRAYLSP-TILSSFLKSAFNLSSTLQNQYAYCSYTSTIPQSTKKPKSYRSPFSFSK-- 127
           K+KR   SP + LSS LK  F  S +LQ Q    S+TS+ PQ        ++  S S   
Sbjct: 8   KLKRP--SPCSALSSLLKPTFFASLSLQYQSPNPSFTSSAPQFDNNQTHLKAIPSCSNPH 65

Query: 126 ---ICPSPSLSSQSVYASLLQSCIDRRAIQPGKQLHAHLYLTGLG 1
               C +P+ S+   YASLLQSCI R+AI+PGKQLHA + L G G
Sbjct: 66  AESTCLTPTYSN---YASLLQSCIARKAIKPGKQLHAQVCLAGFG 107


>emb|CBI36131.3| unnamed protein product [Vitis vinifera]
          Length = 550

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 47/105 (44%), Positives = 60/105 (57%), Gaps = 6/105 (5%)
 Frame = -3

Query: 297 KVKRAYLSP-TILSSFLKSAFNLSSTLQNQYAYCSYTSTIPQSTKKPKSYRSPFSFSK-- 127
           K+KR   SP + LSS LK  F  S +LQ Q    S+TS+ PQ        ++  S S   
Sbjct: 8   KLKRP--SPCSALSSLLKPTFFASLSLQYQSPNPSFTSSAPQFDNNQTHLKAIPSCSNPH 65

Query: 126 ---ICPSPSLSSQSVYASLLQSCIDRRAIQPGKQLHAHLYLTGLG 1
               C +P+ S+   YASLLQSCI R+AI+PGKQLHA + L G G
Sbjct: 66  AESTCLTPTYSN---YASLLQSCIARKAIKPGKQLHAQVCLAGFG 107


>ref|XP_004235427.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Solanum lycopersicum]
          Length = 606

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 28/36 (77%), Positives = 31/36 (86%)
 Frame = -3

Query: 108 LSSQSVYASLLQSCIDRRAIQPGKQLHAHLYLTGLG 1
           L+S   YASLLQSCI R+A+QPGKQLHAHL LTGLG
Sbjct: 30  LNSTQHYASLLQSCIARKAVQPGKQLHAHLCLTGLG 65


>ref|XP_006361605.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Solanum tuberosum]
          Length = 602

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = -3

Query: 90  YASLLQSCIDRRAIQPGKQLHAHLYLTGLG 1
           YASLLQSCI R+A++PGKQLHAHL LTGLG
Sbjct: 32  YASLLQSCIGRKAVEPGKQLHAHLCLTGLG 61


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