BLASTX nr result
ID: Paeonia23_contig00024603
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia23_contig00024603
(1587 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAH66707.1| OSIGBa0147J19.11 [Oryza sativa Indica Group] 201 7e-57
emb|CAE04240.1| OSJNBa0089N06.1 [Oryza sativa Japonica Group] gi... 200 1e-56
gb|AAS90666.1| putative polyprotein [Oryza sativa Japonica Group... 201 1e-56
emb|CAE01794.2| OSJNBa0039K24.13 [Oryza sativa Japonica Group] 200 2e-56
gb|ABA97418.2| retrotransposon protein, putative, Ty3-gypsy subc... 200 2e-56
gb|ABA94797.1| retrotransposon protein, putative, Ty3-gypsy subc... 198 2e-56
gb|ABF93914.1| retrotransposon protein, putative, Ty3-gypsy subc... 200 2e-56
emb|CAE03019.3| OSJNBa0091D06.9 [Oryza sativa Japonica Group] 200 2e-56
gb|AAX93001.1| retrotransposon protein, putative, Ty3-gypsy sub-... 199 2e-56
gb|ABA99634.1| retrotransposon protein, putative, Ty3-gypsy subc... 198 5e-56
gb|ABG66286.1| retrotransposon protein, putative, Ty3-gypsy subc... 198 5e-56
emb|CAJ86189.1| H0306F03.2 [Oryza sativa Indica Group] 197 6e-56
emb|CAE03484.2| OSJNBa0065O17.9 [Oryza sativa Japonica Group] 197 8e-56
ref|XP_007036977.1| DNA/RNA polymerases superfamily protein [The... 194 2e-55
emb|CAN66189.1| hypothetical protein VITISV_006047 [Vitis vinifera] 189 3e-55
emb|CAA73042.1| polyprotein [Ananas comosus] 182 3e-55
ref|XP_007099710.1| Retrotransposon protein, Ty3-gypsy subclass,... 193 3e-55
emb|CAH67121.1| H0502G05.12 [Oryza sativa Indica Group] 200 4e-55
emb|CAD79706.2| H0302E05.9 [Oryza sativa Indica Group] 200 4e-55
gb|ABA94769.1| retrotransposon protein, putative, Ty3-gypsy subc... 197 4e-55
>emb|CAH66707.1| OSIGBa0147J19.11 [Oryza sativa Indica Group]
Length = 1851
Score = 201 bits (511), Expect(2) = 7e-57
Identities = 109/194 (56%), Positives = 127/194 (65%), Gaps = 18/194 (9%)
Frame = -2
Query: 1229 HMS*FTIHPGSTKMYQDVRTTFWWEGLKRDVAE--------------HQRSSGLLQPLPI 1092
H S ++IHPGSTKMYQD++ FWW G+KRDVAE HQR +GLLQPLPI
Sbjct: 1437 HESAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALCDICQRVKAEHQRPAGLLQPLPI 1496
Query: 1091 PSWKWEDISMVFIDGLPLSR*GHDSVGVIVDRLTKSARFLPVLTSRTTDSLARLLYIREI 912
P WKWE+I M FI GLP + G+DS+ VIVDRLTKSA F+PV T+ LA LYI +
Sbjct: 1497 PEWKWEEIGMDFITGLPRTPSGYDSIWVIVDRLTKSAHFVPVKTTYDGKKLAE-LYITHV 1555
Query: 911 VRLQGVLVSIVSDRNHCFVTRFWRSLHTATGIDLHIRTTYHPQTNEQTERVNQILEDMLR 732
V G IVSDR F +RFW+ LH A G DL+ T YHPQT+ QTERVNQILEDMLR
Sbjct: 1556 VCRFGCPKKIVSDRGTQFTSRFWKQLHEALGTDLNFSTAYHPQTDGQTERVNQILEDMLR 1615
Query: 731 G----V*QSQDRCL 702
+ DRCL
Sbjct: 1616 ACALDFEGTWDRCL 1629
Score = 48.5 bits (114), Expect(2) = 7e-57
Identities = 40/115 (34%), Positives = 59/115 (51%), Gaps = 3/115 (2%)
Frame = -1
Query: 1587 VSIQYHPGKANFVAEALSRQYSAALIGANSTE---*RSLETCAPDIRSVSEGSRAYIANM 1417
+ I YHPGKAN VA+ALSR+ + + R LE + V G A++
Sbjct: 1317 LGIHYHPGKANVVADALSRKAYCNIAQIRPDQDHLCRELEKLR--LTVVQSG---VPASL 1371
Query: 1416 VV*PTLISRVVEAQRSNPGILLEISRSCGRLDDCPSNYSVGVNGSLRFHRRLCVP 1252
V PTL S++ EAQ+ + GI I R + D +N+S+ G++ R+CVP
Sbjct: 1372 TVQPTLESQIREAQKDDEGIKELIKRIQEKKD---TNFSIDDQGTVWCGPRICVP 1423
>emb|CAE04240.1| OSJNBa0089N06.1 [Oryza sativa Japonica Group]
gi|57834090|emb|CAE04759.2| OSJNBb0060E08.22 [Oryza
sativa Japonica Group]
Length = 1851
Score = 200 bits (508), Expect(2) = 1e-56
Identities = 108/194 (55%), Positives = 127/194 (65%), Gaps = 18/194 (9%)
Frame = -2
Query: 1229 HMS*FTIHPGSTKMYQDVRTTFWWEGLKRDVAE--------------HQRSSGLLQPLPI 1092
H S ++IHPGSTKMYQD++ FWW G+KRDVAE HQR +GLLQPLPI
Sbjct: 1437 HESAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALCDICQRVKAEHQRPAGLLQPLPI 1496
Query: 1091 PSWKWEDISMVFIDGLPLSR*GHDSVGVIVDRLTKSARFLPVLTSRTTDSLARLLYIREI 912
P WKWE+I M FI GLP + G+DS+ VIVDRLTKSA F+PV T+ LA LY+ +
Sbjct: 1497 PEWKWEEIGMDFITGLPRTPSGYDSIWVIVDRLTKSAHFVPVKTTYDGKKLAE-LYMTHV 1555
Query: 911 VRLQGVLVSIVSDRNHCFVTRFWRSLHTATGIDLHIRTTYHPQTNEQTERVNQILEDMLR 732
V G IVSDR F +RFW+ LH A G DL+ T YHPQT+ QTERVNQILEDMLR
Sbjct: 1556 VCRFGCPKKIVSDRGTQFTSRFWKQLHEALGTDLNFSTAYHPQTDGQTERVNQILEDMLR 1615
Query: 731 G----V*QSQDRCL 702
+ DRCL
Sbjct: 1616 ACALDFEGTWDRCL 1629
Score = 48.9 bits (115), Expect(2) = 1e-56
Identities = 40/115 (34%), Positives = 59/115 (51%), Gaps = 3/115 (2%)
Frame = -1
Query: 1587 VSIQYHPGKANFVAEALSRQYSAALIGANSTE---*RSLETCAPDIRSVSEGSRAYIANM 1417
+ I YHPGKAN VA+ALSR+ + + R LE + V G A++
Sbjct: 1317 LGIHYHPGKANVVADALSRKAYCNIAQIRPDQDHLCRELEKLR--LTVVQSG---VPASL 1371
Query: 1416 VV*PTLISRVVEAQRSNPGILLEISRSCGRLDDCPSNYSVGVNGSLRFHRRLCVP 1252
V PTL S++ EAQ+ + GI I R + D +N+S+ G++ R+CVP
Sbjct: 1372 TVQPTLESQIREAQKDDEGIKELIKRIQEKKD---TNFSIDDQGTIWCGPRICVP 1423
>gb|AAS90666.1| putative polyprotein [Oryza sativa Japonica Group]
gi|55733908|gb|AAV59415.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1649
Score = 201 bits (511), Expect(2) = 1e-56
Identities = 109/194 (56%), Positives = 127/194 (65%), Gaps = 18/194 (9%)
Frame = -2
Query: 1229 HMS*FTIHPGSTKMYQDVRTTFWWEGLKRDVAE--------------HQRSSGLLQPLPI 1092
H S ++IHPGSTKMYQD++ FWW G+KRDVAE HQR +GLLQPLPI
Sbjct: 1234 HESAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALCDICQRVKAEHQRPAGLLQPLPI 1293
Query: 1091 PSWKWEDISMVFIDGLPLSR*GHDSVGVIVDRLTKSARFLPVLTSRTTDSLARLLYIREI 912
P WKWE+I M FI GLP + G+DS+ VIVDRLTKSA F+PV TS LA LY+ +
Sbjct: 1294 PEWKWEEIGMDFITGLPRTPNGYDSIWVIVDRLTKSAHFVPVKTSYDGKKLAE-LYMTHV 1352
Query: 911 VRLQGVLVSIVSDRNHCFVTRFWRSLHTATGIDLHIRTTYHPQTNEQTERVNQILEDMLR 732
V G IVSDR F +RFW+ LH A G DL+ T YHPQT+ QTERVNQILEDMLR
Sbjct: 1353 VCRFGCPKKIVSDRGTQFTSRFWKQLHEALGTDLNFSTAYHPQTDGQTERVNQILEDMLR 1412
Query: 731 G----V*QSQDRCL 702
+ DRCL
Sbjct: 1413 ACALDFEGTWDRCL 1426
Score = 47.8 bits (112), Expect(2) = 1e-56
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 3/115 (2%)
Frame = -1
Query: 1587 VSIQYHPGKANFVAEALSRQYSAALIGANSTE---*RSLETCAPDIRSVSEGSRAYIANM 1417
+ I YHPGKAN VA+ALSR+ + + R LE + V G A++
Sbjct: 1114 LGIHYHPGKANVVADALSRKAYCNVAQIRPDQDHLCRELEKLR--LTVVQSG---VPASL 1168
Query: 1416 VV*PTLISRVVEAQRSNPGILLEISRSCGRLDDCPSNYSVGVNGSLRFHRRLCVP 1252
+ PTL S++ EAQ+ + GI I R + D +N+S+ G++ R+CVP
Sbjct: 1169 TIQPTLESQIREAQKDDEGIKELIKRIQEKKD---TNFSIDDQGTVWCGPRICVP 1220
>emb|CAE01794.2| OSJNBa0039K24.13 [Oryza sativa Japonica Group]
Length = 1851
Score = 200 bits (508), Expect(2) = 2e-56
Identities = 108/194 (55%), Positives = 127/194 (65%), Gaps = 18/194 (9%)
Frame = -2
Query: 1229 HMS*FTIHPGSTKMYQDVRTTFWWEGLKRDVAE--------------HQRSSGLLQPLPI 1092
H S ++IHPGSTKMYQD++ FWW G+KRDVAE HQR +GLLQPLPI
Sbjct: 1437 HESAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALCDICQRVKAEHQRPAGLLQPLPI 1496
Query: 1091 PSWKWEDISMVFIDGLPLSR*GHDSVGVIVDRLTKSARFLPVLTSRTTDSLARLLYIREI 912
P WKWE+I M FI GLP + G+DS+ VIVDRLTKSA F+PV T+ LA LY+ +
Sbjct: 1497 PEWKWEEIGMDFITGLPRTPSGYDSIWVIVDRLTKSAHFVPVKTTYDGKKLAE-LYMTHV 1555
Query: 911 VRLQGVLVSIVSDRNHCFVTRFWRSLHTATGIDLHIRTTYHPQTNEQTERVNQILEDMLR 732
V G IVSDR F +RFW+ LH A G DL+ T YHPQT+ QTERVNQILEDMLR
Sbjct: 1556 VCRFGCPKKIVSDRGTQFTSRFWKQLHEALGTDLNFSTAYHPQTDGQTERVNQILEDMLR 1615
Query: 731 G----V*QSQDRCL 702
+ DRCL
Sbjct: 1616 ACALDFEGTWDRCL 1629
Score = 48.1 bits (113), Expect(2) = 2e-56
Identities = 40/115 (34%), Positives = 59/115 (51%), Gaps = 3/115 (2%)
Frame = -1
Query: 1587 VSIQYHPGKANFVAEALSRQYSAALIGANSTE---*RSLETCAPDIRSVSEGSRAYIANM 1417
+ I YHPGKAN VA+ALSR+ + + R LE + V G A++
Sbjct: 1317 LGIHYHPGKANVVADALSRKAYCNVAQIRPDQDHLCRELEKLR--LTVVQSG---VPASL 1371
Query: 1416 VV*PTLISRVVEAQRSNPGILLEISRSCGRLDDCPSNYSVGVNGSLRFHRRLCVP 1252
V PTL S++ EAQ+ + GI I R + D +N+S+ G++ R+CVP
Sbjct: 1372 TVQPTLESQIREAQKDDEGIKELIKRIQEKKD---TNFSIDDQGTVWCGPRICVP 1423
>gb|ABA97418.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1807
Score = 200 bits (508), Expect(2) = 2e-56
Identities = 108/194 (55%), Positives = 127/194 (65%), Gaps = 18/194 (9%)
Frame = -2
Query: 1229 HMS*FTIHPGSTKMYQDVRTTFWWEGLKRDVAE--------------HQRSSGLLQPLPI 1092
H S ++IHPGSTKMYQD++ FWW G+KRDVAE HQR +GLLQPLPI
Sbjct: 1393 HESAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALSDICQRVKAEHQRPAGLLQPLPI 1452
Query: 1091 PSWKWEDISMVFIDGLPLSR*GHDSVGVIVDRLTKSARFLPVLTSRTTDSLARLLYIREI 912
P WKWE+I M FI GLP + G+DS+ VIVDRLTKSA F+PV T+ LA LY+ +
Sbjct: 1453 PEWKWEEIGMDFITGLPRTPNGYDSIWVIVDRLTKSAHFVPVKTTYDGKKLAE-LYMTHV 1511
Query: 911 VRLQGVLVSIVSDRNHCFVTRFWRSLHTATGIDLHIRTTYHPQTNEQTERVNQILEDMLR 732
V G IVSDR F +RFW+ LH A G DL+ T YHPQT+ QTERVNQILEDMLR
Sbjct: 1512 VCRFGCPKKIVSDRGTQFTSRFWKQLHEALGTDLNFSTAYHPQTDGQTERVNQILEDMLR 1571
Query: 731 G----V*QSQDRCL 702
+ DRCL
Sbjct: 1572 AYALDFEGTWDRCL 1585
Score = 48.1 bits (113), Expect(2) = 2e-56
Identities = 38/113 (33%), Positives = 56/113 (49%), Gaps = 1/113 (0%)
Frame = -1
Query: 1587 VSIQYHPGKANFVAEALSRQYSAALIGANSTE*RSLETCAP-DIRSVSEGSRAYIANMVV 1411
+ I YHPGKAN VA+ALSR+ A C + ++ A++ V
Sbjct: 1273 LGIHYHPGKANVVADALSRK---AYCNVAQIRPDQDHLCGELEKLRLTVVQSGVPASLTV 1329
Query: 1410 *PTLISRVVEAQRSNPGILLEISRSCGRLDDCPSNYSVGVNGSLRFHRRLCVP 1252
PTL SR+ EAQ+ + GI I R + D +N+S+ G++ R+CVP
Sbjct: 1330 QPTLESRIREAQKDDEGIKELIKRIQEKKD---TNFSIDDQGTVWCGPRICVP 1379
>gb|ABA94797.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1784
Score = 198 bits (504), Expect(2) = 2e-56
Identities = 107/194 (55%), Positives = 126/194 (64%), Gaps = 18/194 (9%)
Frame = -2
Query: 1229 HMS*FTIHPGSTKMYQDVRTTFWWEGLKRDVAE--------------HQRSSGLLQPLPI 1092
H S ++IHPGSTKMYQD++ FWW G+KRDVAE HQR +GLLQPLPI
Sbjct: 1370 HESAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALCDICQRVKAEHQRPAGLLQPLPI 1429
Query: 1091 PSWKWEDISMVFIDGLPLSR*GHDSVGVIVDRLTKSARFLPVLTSRTTDSLARLLYIREI 912
P WKWE+I M FI GLP + G+DS+ VIVDRLTKSA F+PV T+ LA LY+ +
Sbjct: 1430 PEWKWEEIGMDFITGLPRTPCGYDSIWVIVDRLTKSAHFVPVKTTYDGKKLAE-LYMTHV 1488
Query: 911 VRLQGVLVSIVSDRNHCFVTRFWRSLHTATGIDLHIRTTYHPQTNEQTERVNQILEDMLR 732
V G IVSDR F +RFW+ LH G DL+ T YHPQT+ QTERVNQILEDMLR
Sbjct: 1489 VCRFGCPKKIVSDRGTQFTSRFWKQLHETLGTDLNFSTAYHPQTDGQTERVNQILEDMLR 1548
Query: 731 G----V*QSQDRCL 702
+ DRCL
Sbjct: 1549 ACALDFEGTWDRCL 1562
Score = 49.7 bits (117), Expect(2) = 2e-56
Identities = 38/113 (33%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Frame = -1
Query: 1587 VSIQYHPGKANFVAEALSRQYSAALIGANSTE*RSLETCAP-DIRSVSEGSRAYIANMVV 1411
+ I YHPGKAN VA+ALSR+ A T C + ++ A++ V
Sbjct: 1250 LGIHYHPGKANVVADALSRK---AYCNVAQTRPNQDHLCRELEKLRLTVVQSGVPASLTV 1306
Query: 1410 *PTLISRVVEAQRSNPGILLEISRSCGRLDDCPSNYSVGVNGSLRFHRRLCVP 1252
PTL S++ EAQ+ + GI I R + D +N+S+ G++ R+CVP
Sbjct: 1307 QPTLESQIREAQKDDEGIKELIKRIREKKD---TNFSIDEQGTVWCGPRICVP 1356
>gb|ABF93914.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1776
Score = 200 bits (508), Expect(2) = 2e-56
Identities = 108/194 (55%), Positives = 127/194 (65%), Gaps = 18/194 (9%)
Frame = -2
Query: 1229 HMS*FTIHPGSTKMYQDVRTTFWWEGLKRDVAE--------------HQRSSGLLQPLPI 1092
H S ++IHPGSTKMYQD++ FWW G+KRDVAE HQR +GLLQPLPI
Sbjct: 1362 HESAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALCDICQRVKAEHQRPAGLLQPLPI 1421
Query: 1091 PSWKWEDISMVFIDGLPLSR*GHDSVGVIVDRLTKSARFLPVLTSRTTDSLARLLYIREI 912
P WKWE+I M FI GLP + G+DS+ VIVDRLTKSA F+PV T+ LA LY+ +
Sbjct: 1422 PGWKWEEIGMDFITGLPRTPSGYDSIWVIVDRLTKSAHFVPVKTTYDGKKLAE-LYMTHV 1480
Query: 911 VRLQGVLVSIVSDRNHCFVTRFWRSLHTATGIDLHIRTTYHPQTNEQTERVNQILEDMLR 732
V G IVSDR F +RFW+ LH A G DL+ T YHPQT+ QTERVNQILEDMLR
Sbjct: 1481 VCRFGCPKKIVSDRGTQFTSRFWKQLHEALGTDLNFSTAYHPQTDGQTERVNQILEDMLR 1540
Query: 731 G----V*QSQDRCL 702
+ DRCL
Sbjct: 1541 ACALDFEGTWDRCL 1554
Score = 48.1 bits (113), Expect(2) = 2e-56
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 3/115 (2%)
Frame = -1
Query: 1587 VSIQYHPGKANFVAEALSRQYSAALIGANSTE---*RSLETCAPDIRSVSEGSRAYIANM 1417
+ I YHPGKAN VA+ALSR+ + + R LE + V G A++
Sbjct: 1242 LGIHYHPGKANVVADALSRKAYCNVAQIRPDQDHLCRELEKLR--LTVVQSG---VPASL 1296
Query: 1416 VV*PTLISRVVEAQRSNPGILLEISRSCGRLDDCPSNYSVGVNGSLRFHRRLCVP 1252
V PTL S++ EAQ+ + G+ I R + D +N+S+ G++ R+CVP
Sbjct: 1297 TVQPTLESQIREAQKDDEGVKELIKRIQEKKD---TNFSIDDQGTVWCGSRICVP 1348
>emb|CAE03019.3| OSJNBa0091D06.9 [Oryza sativa Japonica Group]
Length = 1762
Score = 200 bits (508), Expect(2) = 2e-56
Identities = 108/194 (55%), Positives = 127/194 (65%), Gaps = 18/194 (9%)
Frame = -2
Query: 1229 HMS*FTIHPGSTKMYQDVRTTFWWEGLKRDVAE--------------HQRSSGLLQPLPI 1092
H S ++IHPGSTKMYQD++ FWW G+KRDVAE HQR +GLLQPLPI
Sbjct: 1348 HESAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALCDICQRVKAEHQRPAGLLQPLPI 1407
Query: 1091 PSWKWEDISMVFIDGLPLSR*GHDSVGVIVDRLTKSARFLPVLTSRTTDSLARLLYIREI 912
P WKWE+I M FI GLP + G+DS+ VIVDRLTKSA F+PV T+ LA LY+ +
Sbjct: 1408 PEWKWEEIGMDFITGLPRTPNGYDSIWVIVDRLTKSAHFVPVKTTYDGKKLAE-LYMTHV 1466
Query: 911 VRLQGVLVSIVSDRNHCFVTRFWRSLHTATGIDLHIRTTYHPQTNEQTERVNQILEDMLR 732
V G IVSDR F +RFW+ LH A G DL+ T YHPQT+ QTERVNQILEDMLR
Sbjct: 1467 VCRFGCPKKIVSDRGTQFTSRFWKQLHEALGTDLNFSTAYHPQTDGQTERVNQILEDMLR 1526
Query: 731 G----V*QSQDRCL 702
+ DRCL
Sbjct: 1527 ACALDFEGTWDRCL 1540
Score = 48.1 bits (113), Expect(2) = 2e-56
Identities = 40/115 (34%), Positives = 59/115 (51%), Gaps = 3/115 (2%)
Frame = -1
Query: 1587 VSIQYHPGKANFVAEALSRQYSAALIGANSTE---*RSLETCAPDIRSVSEGSRAYIANM 1417
+ I YHPGKAN VA+ALSR+ + + R LE + V G A++
Sbjct: 1228 LGIHYHPGKANVVADALSRKAYCNVAQIRPDQDHLCRELEKLR--LTVVQSG---VPASL 1282
Query: 1416 VV*PTLISRVVEAQRSNPGILLEISRSCGRLDDCPSNYSVGVNGSLRFHRRLCVP 1252
V PTL S++ EAQ+ + GI I R + D +N+S+ G++ R+CVP
Sbjct: 1283 TVQPTLESQIREAQKDDEGIKELIKRIQEKKD---TNFSIDDQGTVWCGPRICVP 1334
>gb|AAX93001.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] gi|77548823|gb|ABA91620.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1761
Score = 199 bits (506), Expect(2) = 2e-56
Identities = 108/194 (55%), Positives = 126/194 (64%), Gaps = 18/194 (9%)
Frame = -2
Query: 1229 HMS*FTIHPGSTKMYQDVRTTFWWEGLKRDVAE--------------HQRSSGLLQPLPI 1092
H S ++IHPGSTKMYQD++ FWW G+KRDVAE HQR +GLLQPLPI
Sbjct: 1347 HESAYSIHPGSTKMYQDIKAYFWWTGMKRDVAEYVALCDICQRVKAEHQRPAGLLQPLPI 1406
Query: 1091 PSWKWEDISMVFIDGLPLSR*GHDSVGVIVDRLTKSARFLPVLTSRTTDSLARLLYIREI 912
P WKWE+I M FI GLP + G+DS+ VIVDRLTKSA F+PV T LA LY+ +
Sbjct: 1407 PEWKWEEIGMYFITGLPRTPSGYDSIWVIVDRLTKSAHFVPVKTIFDGKKLAE-LYMTHV 1465
Query: 911 VRLQGVLVSIVSDRNHCFVTRFWRSLHTATGIDLHIRTTYHPQTNEQTERVNQILEDMLR 732
V G IVSDR F +RFW+ LH A G DL+ T YHPQT+ QTERVNQILEDMLR
Sbjct: 1466 VCRFGCPKKIVSDRGTQFTSRFWKQLHEALGTDLNFSTAYHPQTDGQTERVNQILEDMLR 1525
Query: 731 G----V*QSQDRCL 702
+ DRCL
Sbjct: 1526 ACALDFEGTWDRCL 1539
Score = 48.9 bits (115), Expect(2) = 2e-56
Identities = 37/112 (33%), Positives = 57/112 (50%)
Frame = -1
Query: 1587 VSIQYHPGKANFVAEALSRQYSAALIGANSTE*RSLETCAPDIRSVSEGSRAYIANMVV* 1408
+ I YHPGKAN VA+ALSR+ + + R +V + A++ V
Sbjct: 1227 LGIHYHPGKANVVADALSRKAYCNVAQIRPDQDRLCRELEKLRLTVVQS--GVPASLTVQ 1284
Query: 1407 PTLISRVVEAQRSNPGILLEISRSCGRLDDCPSNYSVGVNGSLRFHRRLCVP 1252
PTL S++ EAQ+ + GI I R + D +N+S+ G++ R+CVP
Sbjct: 1285 PTLESQIREAQKDDEGIKELIKRIQEKKD---TNFSIDDQGTVWCGPRICVP 1333
>gb|ABA99634.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1851
Score = 198 bits (503), Expect(2) = 5e-56
Identities = 107/194 (55%), Positives = 126/194 (64%), Gaps = 18/194 (9%)
Frame = -2
Query: 1229 HMS*FTIHPGSTKMYQDVRTTFWWEGLKRDVAE--------------HQRSSGLLQPLPI 1092
H S ++IHPGSTKMYQD++ FWW G+KRDVAE H R +GLLQPLPI
Sbjct: 1437 HESAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALCDICQRVKAEHHRPAGLLQPLPI 1496
Query: 1091 PSWKWEDISMVFIDGLPLSR*GHDSVGVIVDRLTKSARFLPVLTSRTTDSLARLLYIREI 912
P WKWE+I M FI GLP + G+DS+ VIVDRLTKSA F+PV T+ LA LY+ +
Sbjct: 1497 PEWKWEEIGMDFITGLPRTPSGYDSIWVIVDRLTKSAHFVPVKTTYDGKKLAE-LYMTHV 1555
Query: 911 VRLQGVLVSIVSDRNHCFVTRFWRSLHTATGIDLHIRTTYHPQTNEQTERVNQILEDMLR 732
V G IVSDR F +RFW+ LH A G DL+ T YHPQT+ QTERVNQILEDMLR
Sbjct: 1556 VCRFGCPKKIVSDRGTQFTSRFWKQLHEALGTDLNFSTAYHPQTDGQTERVNQILEDMLR 1615
Query: 731 G----V*QSQDRCL 702
+ DRCL
Sbjct: 1616 ACALDFEGTWDRCL 1629
Score = 48.9 bits (115), Expect(2) = 5e-56
Identities = 42/115 (36%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Frame = -1
Query: 1587 VSIQYHPGKANFVAEALSRQ--YSAALIGANSTE-*RSLETCAPDIRSVSEGSRAYIANM 1417
+ I YHPGKAN VA+ALSR+ + A I + + R LE + V G A++
Sbjct: 1317 LGIHYHPGKANVVADALSRKAYCNVAQIRPDQDQLCRELEKLR--LTVVQSG---VPASL 1371
Query: 1416 VV*PTLISRVVEAQRSNPGILLEISRSCGRLDDCPSNYSVGVNGSLRFHRRLCVP 1252
V PTL S++ EAQ+ + GI I R + D +N+S+ G++ R+CVP
Sbjct: 1372 TVQPTLESQIREAQKEDEGIKELIERIQEKKD---TNFSIDDQGTVWCGPRICVP 1423
>gb|ABG66286.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1759
Score = 198 bits (504), Expect(2) = 5e-56
Identities = 107/194 (55%), Positives = 127/194 (65%), Gaps = 18/194 (9%)
Frame = -2
Query: 1229 HMS*FTIHPGSTKMYQDVRTTFWWEGLKRDVAE--------------HQRSSGLLQPLPI 1092
H S ++IHPGSTKMYQD++ FWW G+KRDVAE HQR +GLLQPLPI
Sbjct: 1345 HESAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALCDICQRVKAEHQRPAGLLQPLPI 1404
Query: 1091 PSWKWEDISMVFIDGLPLSR*GHDSVGVIVDRLTKSARFLPVLTSRTTDSLARLLYIREI 912
P WKWE+I M FI GLP + G+DS+ VIVDRLTKSA F+P+ T+ LA LY+ +
Sbjct: 1405 PEWKWEEIGMDFITGLPRTPSGYDSIWVIVDRLTKSAHFVPMKTTFDGKKLAE-LYMTHV 1463
Query: 911 VRLQGVLVSIVSDRNHCFVTRFWRSLHTATGIDLHIRTTYHPQTNEQTERVNQILEDMLR 732
V G IVSDR F +RFW+ LH A G DL+ T YHPQT+ QTERVNQILEDMLR
Sbjct: 1464 VCRFGCPKKIVSDRGTQFTSRFWKQLHEALGTDLNFSTAYHPQTDGQTERVNQILEDMLR 1523
Query: 731 G----V*QSQDRCL 702
+ DRCL
Sbjct: 1524 ACALDFEGTWDRCL 1537
Score = 48.5 bits (114), Expect(2) = 5e-56
Identities = 36/112 (32%), Positives = 59/112 (52%)
Frame = -1
Query: 1587 VSIQYHPGKANFVAEALSRQYSAALIGANSTE*RSLETCAPDIRSVSEGSRAYIANMVV* 1408
+ I YHPGKAN VA+ALSR+ + + R +V + A A++ V
Sbjct: 1225 LGIHYHPGKANVVADALSRKTYCNVDQIRPDQDRLCRDLEKLRLTVVQSGVA--ASLTVQ 1282
Query: 1407 PTLISRVVEAQRSNPGILLEISRSCGRLDDCPSNYSVGVNGSLRFHRRLCVP 1252
PTL S++ +AQ+ + GI I R + D +++S+ G++ + R+CVP
Sbjct: 1283 PTLESQIRKAQKDDEGIKELIKRIQEKKD---TDFSIDDQGTVWYGPRICVP 1331
>emb|CAJ86189.1| H0306F03.2 [Oryza sativa Indica Group]
Length = 1135
Score = 197 bits (501), Expect(2) = 6e-56
Identities = 107/194 (55%), Positives = 126/194 (64%), Gaps = 18/194 (9%)
Frame = -2
Query: 1229 HMS*FTIHPGSTKMYQDVRTTFWWEGLKRDVAE--------------HQRSSGLLQPLPI 1092
H S ++IHPGSTKMYQD++ FWW G+KRDVAE HQR +GLLQPLPI
Sbjct: 721 HQSAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALCDICQRVKAEHQRPAGLLQPLPI 780
Query: 1091 PSWKWEDISMVFIDGLPLSR*GHDSVGVIVDRLTKSARFLPVLTSRTTDSLARLLYIREI 912
P WKWE+I M FI GLP + +DS+ VIVDRLTKSA F+PV T+ LA LY+ +
Sbjct: 781 PEWKWEEIGMDFITGLPRTPSRYDSIWVIVDRLTKSAHFVPVKTTFDGKKLAE-LYMTHV 839
Query: 911 VRLQGVLVSIVSDRNHCFVTRFWRSLHTATGIDLHIRTTYHPQTNEQTERVNQILEDMLR 732
V G IVSDR F +RFW+ LH A G DL+ T YHPQT+ QTERVNQILEDMLR
Sbjct: 840 VCRFGCPKKIVSDRGTQFTSRFWKQLHEALGTDLNFSTAYHPQTDGQTERVNQILEDMLR 899
Query: 731 G----V*QSQDRCL 702
+ DRCL
Sbjct: 900 ACALDFEGTWDRCL 913
Score = 49.3 bits (116), Expect(2) = 6e-56
Identities = 37/112 (33%), Positives = 57/112 (50%)
Frame = -1
Query: 1587 VSIQYHPGKANFVAEALSRQYSAALIGANSTE*RSLETCAPDIRSVSEGSRAYIANMVV* 1408
+ I YHPGKAN VA+ALSR+ + + R +V + A++ V
Sbjct: 601 LGIHYHPGKANVVADALSRKAYCNIAQIRPDQDRLCRELEKLRLTVVQS--GVPASLTVQ 658
Query: 1407 PTLISRVVEAQRSNPGILLEISRSCGRLDDCPSNYSVGVNGSLRFHRRLCVP 1252
PTL S++ EAQ+ + GI I R + D +N+S+ G++ R+CVP
Sbjct: 659 PTLESQIREAQKDDEGIKELIKRIQEKKD---TNFSIDNQGTVWCGPRICVP 707
>emb|CAE03484.2| OSJNBa0065O17.9 [Oryza sativa Japonica Group]
Length = 1851
Score = 197 bits (502), Expect(2) = 8e-56
Identities = 106/194 (54%), Positives = 125/194 (64%), Gaps = 18/194 (9%)
Frame = -2
Query: 1229 HMS*FTIHPGSTKMYQDVRTTFWWEGLKRDVAE--------------HQRSSGLLQPLPI 1092
H S ++IHPGSTKMYQD++ FWW G+KRDVAE HQ+ +GLLQPLPI
Sbjct: 1437 HESAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALCDVCQRVKAEHQKPAGLLQPLPI 1496
Query: 1091 PSWKWEDISMVFIDGLPLSR*GHDSVGVIVDRLTKSARFLPVLTSRTTDSLARLLYIREI 912
P WKWE+I M FI GLP + G+DS+ VIVDRLTKSA F+PV T+ LA L R +
Sbjct: 1497 PEWKWEEIGMDFITGLPRTPSGYDSIWVIVDRLTKSAHFVPVKTTFDGKKLAELYMTRVV 1556
Query: 911 VRLQGVLVSIVSDRNHCFVTRFWRSLHTATGIDLHIRTTYHPQTNEQTERVNQILEDMLR 732
R G IVSDR F +RFW LH A G DL+ T YHPQT+ QTERVNQ+LEDMLR
Sbjct: 1557 CRF-GCPKKIVSDRGTQFTSRFWNQLHEALGTDLNFSTAYHPQTDGQTERVNQVLEDMLR 1615
Query: 731 G----V*QSQDRCL 702
+ DRCL
Sbjct: 1616 ACALDFEGTWDRCL 1629
Score = 48.5 bits (114), Expect(2) = 8e-56
Identities = 42/115 (36%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Frame = -1
Query: 1587 VSIQYHPGKANFVAEALSRQY--SAALIGANSTE-*RSLETCAPDIRSVSEGSRAYIANM 1417
+ I YHPGKAN VA+ALSR+ + A I + R LE + V G A++
Sbjct: 1317 LGIHYHPGKANVVADALSRKVYCNVAQIWPDQDRLCRELEKLR--LTVVQSG---VPASL 1371
Query: 1416 VV*PTLISRVVEAQRSNPGILLEISRSCGRLDDCPSNYSVGVNGSLRFHRRLCVP 1252
V PTL S++ EAQ+ + GI I R + D +N+S+ G++ R+CVP
Sbjct: 1372 TVQPTLESQIREAQKDDEGIKELIKRIQEKKD---TNFSIDDQGTVWCGPRICVP 1423
>ref|XP_007036977.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508774222|gb|EOY21478.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 878
Score = 194 bits (492), Expect(2) = 2e-55
Identities = 96/180 (53%), Positives = 122/180 (67%), Gaps = 14/180 (7%)
Frame = -2
Query: 1229 HMS*FTIHPGSTKMYQDVRTTFWWEGLKRDVAE--------------HQRSSGLLQPLPI 1092
HM+ + +HPG+TKMYQD++ +WWEGLKRDVAE HQ+ +GLLQPLP+
Sbjct: 641 HMAAYVVHPGATKMYQDLKEVYWWEGLKRDVAEFVSKCLVCQQVKAEHQKPAGLLQPLPV 700
Query: 1091 PSWKWEDISMVFIDGLPLSR*GHDSVGVIVDRLTKSARFLPVLTSRTTDSLARLLYIREI 912
P WKWE I+M F+ GLP + G+DS+ ++VDRLTKSA FLPV T+ AR +Y+ EI
Sbjct: 701 PEWKWEHIAMDFVTGLPRTSGGYDSIWIVVDRLTKSAHFLPVKTTYGAAQYAR-VYVDEI 759
Query: 911 VRLQGVLVSIVSDRNHCFVTRFWRSLHTATGIDLHIRTTYHPQTNEQTERVNQILEDMLR 732
VRL G+ +SIVSDR F +RFW L A G L T +HPQT+ Q+ER Q LEDMLR
Sbjct: 760 VRLHGIPISIVSDRGAQFTSRFWGKLQEALGTKLDFSTAFHPQTDGQSERTIQTLEDMLR 819
Score = 51.2 bits (121), Expect(2) = 2e-55
Identities = 39/116 (33%), Positives = 57/116 (49%), Gaps = 4/116 (3%)
Frame = -1
Query: 1584 SIQYHPGKANFVAEALSRQYSAAL----IGANSTE*RSLETCAPDIRSVSEGSRAYIANM 1417
+I YHPGKAN VA+ALSR+ +L IG S +R + A +A+
Sbjct: 516 TILYHPGKANVVADALSRKSMGSLAHIFIGRRSLVREIHSLGDIGVRLEVAETNALLAHF 575
Query: 1416 VV*PTLISRVVEAQRSNPGILLEISRSCGRLDDCPSNYSVGVNGSLRFHRRLCVPD 1249
V P L+ R+ EAQ + ++ + GR ++ G +G LR+ RL VPD
Sbjct: 576 RVRPILMDRIKEAQSKDEFVIKALEDPQGRKG---KMFTKGTDGVLRYGTRLYVPD 628
>emb|CAN66189.1| hypothetical protein VITISV_006047 [Vitis vinifera]
Length = 1573
Score = 189 bits (480), Expect(2) = 3e-55
Identities = 99/180 (55%), Positives = 128/180 (71%), Gaps = 14/180 (7%)
Frame = -2
Query: 1229 HMS*FTIHPGSTKMYQDVRTTFWWEGLKRDVA--------------EHQRSSGLLQPLPI 1092
H + +TIHPG+TKMYQD++ F W G+KRD+A EHQR + LLQPLPI
Sbjct: 1203 HRAKYTIHPGNTKMYQDLKRQFXWSGMKRDIAQFVANCQICQQVKAEHQRPAELLQPLPI 1262
Query: 1091 PSWKWEDISMVFIDGLPLSR*GHDSVGVIVDRLTKSARFLPVLTSRTTDSLARLLYIREI 912
P WKW++I+M F+ GLP +R + V VIVDRLTKSA FL + T+ + +SLA+ LYI+EI
Sbjct: 1263 PKWKWDNITMDFVIGLPRTRSKKNGVWVIVDRLTKSAHFLAMKTTDSMNSLAK-LYIQEI 1321
Query: 911 VRLQGVLVSIVSDRNHCFVTRFWRSLHTATGIDLHIRTTYHPQTNEQTERVNQILEDMLR 732
VRL G+ VSIVSDR+ F ++FW+SL A G L+ T +HPQT+ Q+ERV QILEDMLR
Sbjct: 1322 VRLHGIPVSIVSDRDPKFTSQFWQSLQRALGTQLNFSTVFHPQTDGQSERVIQILEDMLR 1381
Score = 55.1 bits (131), Expect(2) = 3e-55
Identities = 39/118 (33%), Positives = 62/118 (52%), Gaps = 2/118 (1%)
Frame = -1
Query: 1584 SIQYHPGKANFVAEALSRQYSAALIGANSTE*RSLETCAP-DIRSVSEGSRAYIANMVV* 1408
++ YHPGKAN VA+ALSR+ L E ++ V EG + ++
Sbjct: 1080 ALHYHPGKANVVADALSRKSYGQLFSLGLREFEMYAVIEDFELCLVQEGRGPCLYSISAR 1139
Query: 1407 PTLISRVVEAQRSNPGI-LLEISRSCGRLDDCPSNYSVGVNGSLRFHRRLCVPDILKL 1237
P +I R+VEAQ + + ++ G +D+ N+S+ +GS+RF RLCVP ++L
Sbjct: 1140 PMVIQRIVEAQVHDEFLEKVKAQLVAGEIDE---NWSMYEDGSVRFKGRLCVPKDVEL 1194
>emb|CAA73042.1| polyprotein [Ananas comosus]
Length = 871
Score = 182 bits (463), Expect(2) = 3e-55
Identities = 94/180 (52%), Positives = 122/180 (67%), Gaps = 14/180 (7%)
Frame = -2
Query: 1229 HMS*FTIHPGSTKMYQDVRTTFWWEGLKRDV--------------AEHQRSSGLLQPLPI 1092
H + + IHPG TKMY+D++ +WW G+K+DV AEH+ +G LQ LPI
Sbjct: 532 HRAPYAIHPGGTKMYKDLKLLYWWPGIKKDVGEFVAKCLTCQQVKAEHRVPAGKLQSLPI 591
Query: 1091 PSWKWEDISMVFIDGLPLSR*GHDSVGVIVDRLTKSARFLPVLTSRTTDSLARLLYIREI 912
P WKWE I+M F+ GLP S+ GHD++ VIVDRLTKSA F+P+ T+ T + LA+ +Y+ EI
Sbjct: 592 PVWKWEKITMDFVTGLPRSQAGHDAIWVIVDRLTKSAHFIPIHTTWTGERLAQ-VYLDEI 650
Query: 911 VRLQGVLVSIVSDRNHCFVTRFWRSLHTATGIDLHIRTTYHPQTNEQTERVNQILEDMLR 732
VRL GV SIVSDR+ FV+ FWRSL A G L T +HPQ++ Q+ER Q LEDMLR
Sbjct: 651 VRLHGVPTSIVSDRDTRFVSHFWRSLQDALGTRLDFSTAFHPQSDGQSERTIQTLEDMLR 710
Score = 61.6 bits (148), Expect(2) = 3e-55
Identities = 39/114 (34%), Positives = 66/114 (57%), Gaps = 2/114 (1%)
Frame = -1
Query: 1587 VSIQYHPGKANFVAEALSRQYSAALIGANSTE*RSLETCAP-DIRSVSEGSRAYIANMVV 1411
++I YHPGKAN VA+ALSR+ L T+ R +E ++ V+ + + +VV
Sbjct: 409 LTILYHPGKANVVADALSRKSMENLAMHVVTQPRLIEQMKRLELEIVTPDTPMRLMTLVV 468
Query: 1410 *PTLISRVVEAQRSNPGILLEISRSCGRL-DDCPSNYSVGVNGSLRFHRRLCVP 1252
PTL+ R+ E Q S+ +E+ + G++ D C ++++ +G +RF R+CVP
Sbjct: 469 QPTLLDRIKEKQASD----VELQKIKGKMVDGCTGDFTLDGDGLMRFRGRICVP 518
>ref|XP_007099710.1| Retrotransposon protein, Ty3-gypsy subclass, putative [Theobroma
cacao] gi|508728428|gb|EOY20325.1| Retrotransposon
protein, Ty3-gypsy subclass, putative [Theobroma cacao]
Length = 460
Score = 193 bits (490), Expect(2) = 3e-55
Identities = 96/180 (53%), Positives = 122/180 (67%), Gaps = 14/180 (7%)
Frame = -2
Query: 1229 HMS*FTIHPGSTKMYQDVRTTFWWEGLKRDVAE--------------HQRSSGLLQPLPI 1092
HM+ + +HPG+TKMYQD++ +WWEGLKRDVAE HQ+ +GLLQPLP+
Sbjct: 227 HMAAYVVHPGATKMYQDLKEVYWWEGLKRDVAEFVSKCLVCQQVKAEHQKPAGLLQPLPV 286
Query: 1091 PSWKWEDISMVFIDGLPLSR*GHDSVGVIVDRLTKSARFLPVLTSRTTDSLARLLYIREI 912
P WKWE I+M F+ GLP + G+DS+ ++VDRLTKSA FLPV T+ AR +Y+ EI
Sbjct: 287 PEWKWEHIAMDFVTGLPRTSGGYDSIWIVVDRLTKSAHFLPVKTTYGAAQYAR-VYVDEI 345
Query: 911 VRLQGVLVSIVSDRNHCFVTRFWRSLHTATGIDLHIRTTYHPQTNEQTERVNQILEDMLR 732
VRL G+ +SIVSDR F +RFW L A G L T +HPQT+ Q+ER Q LEDMLR
Sbjct: 346 VRLHGIPISIVSDRGAQFTSRFWGKLQEALGTKLDFITAFHPQTDGQSERTIQTLEDMLR 405
Score = 51.2 bits (121), Expect(2) = 3e-55
Identities = 39/116 (33%), Positives = 57/116 (49%), Gaps = 4/116 (3%)
Frame = -1
Query: 1584 SIQYHPGKANFVAEALSRQYSAAL----IGANSTE*RSLETCAPDIRSVSEGSRAYIANM 1417
+I YHPGKAN VA+ALSR+ +L IG S +R + A +A+
Sbjct: 102 TILYHPGKANVVADALSRKSMGSLAHISIGRRSLVREIHSLGDIGVRLEVAETNALLAHF 161
Query: 1416 VV*PTLISRVVEAQRSNPGILLEISRSCGRLDDCPSNYSVGVNGSLRFHRRLCVPD 1249
V P L+ R+ EAQ + ++ + GR ++ G +G LR+ RL VPD
Sbjct: 162 RVRPILMDRIKEAQSKDEFVIKALEDPQGRKG---KMFTKGTDGVLRYGTRLYVPD 214
>emb|CAH67121.1| H0502G05.12 [Oryza sativa Indica Group]
Length = 1877
Score = 200 bits (508), Expect(2) = 4e-55
Identities = 108/194 (55%), Positives = 127/194 (65%), Gaps = 18/194 (9%)
Frame = -2
Query: 1229 HMS*FTIHPGSTKMYQDVRTTFWWEGLKRDVAE--------------HQRSSGLLQPLPI 1092
H S ++IHPGSTKMYQD++ FWW G+KRDVAE HQR +GLLQPLPI
Sbjct: 1463 HESAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALCDICQRVKAEHQRPAGLLQPLPI 1522
Query: 1091 PSWKWEDISMVFIDGLPLSR*GHDSVGVIVDRLTKSARFLPVLTSRTTDSLARLLYIREI 912
P WKWE+I M FI GLP + G+DS+ VIVDRLTKSA F+PV T+ LA LY+ +
Sbjct: 1523 PEWKWEEIGMDFITGLPRTPNGYDSIWVIVDRLTKSAHFVPVKTTYDGKKLAE-LYMTHV 1581
Query: 911 VRLQGVLVSIVSDRNHCFVTRFWRSLHTATGIDLHIRTTYHPQTNEQTERVNQILEDMLR 732
V G IVSDR F +RFW+ LH A G DL+ T YHPQT+ QTERVNQILEDMLR
Sbjct: 1582 VCRFGCPKKIVSDRGTQFTSRFWKQLHEALGTDLNFSTAYHPQTDGQTERVNQILEDMLR 1641
Query: 731 G----V*QSQDRCL 702
+ DRCL
Sbjct: 1642 ACALDFEGTWDRCL 1655
Score = 43.9 bits (102), Expect(2) = 4e-55
Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 3/115 (2%)
Frame = -1
Query: 1587 VSIQYHPGKANFVAEALSRQYSAALIGANSTE---*RSLETCAPDIRSVSEGSRAYIANM 1417
+ I YHPGKAN VA+ALSR+ + + R LE + V G A++
Sbjct: 1343 LGIHYHPGKANVVADALSRKAYCNVAQIRPDQDHLCRELEKLR--LTVVQSG---VPASL 1397
Query: 1416 VV*PTLISRVVEAQRSNPGILLEISRSCGRLDDCPSNYSVGVNGSLRFHRRLCVP 1252
V PTL S++ EAQ+ + GI I R + D +N+S+ G++ R+ VP
Sbjct: 1398 TVQPTLESQIREAQKDDEGIKELIKRIQEKKD---TNFSIDDQGTVWCGPRIYVP 1449
>emb|CAD79706.2| H0302E05.9 [Oryza sativa Indica Group]
Length = 1820
Score = 200 bits (508), Expect(2) = 4e-55
Identities = 108/194 (55%), Positives = 127/194 (65%), Gaps = 18/194 (9%)
Frame = -2
Query: 1229 HMS*FTIHPGSTKMYQDVRTTFWWEGLKRDVAE--------------HQRSSGLLQPLPI 1092
H S ++IHPGSTKMYQD++ FWW G+KRDVAE HQR +GLLQPLPI
Sbjct: 1406 HESAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALCDICQRIKAEHQRPAGLLQPLPI 1465
Query: 1091 PSWKWEDISMVFIDGLPLSR*GHDSVGVIVDRLTKSARFLPVLTSRTTDSLARLLYIREI 912
P WKWE+I M FI GLP + G+DS+ VIVDRLTKSA F+PV T+ LA LY+ +
Sbjct: 1466 PEWKWEEIGMDFITGLPRTPSGYDSIWVIVDRLTKSAHFVPVKTTYDGKKLAE-LYMTHV 1524
Query: 911 VRLQGVLVSIVSDRNHCFVTRFWRSLHTATGIDLHIRTTYHPQTNEQTERVNQILEDMLR 732
V G IVSDR F +RFW+ LH A G DL+ T YHPQT+ QTERVNQILEDMLR
Sbjct: 1525 VCRFGCPKKIVSDRGTQFTSRFWKQLHEALGTDLNFSTAYHPQTDGQTERVNQILEDMLR 1584
Query: 731 G----V*QSQDRCL 702
+ DRCL
Sbjct: 1585 ACALDFEGTWDRCL 1598
Score = 43.9 bits (102), Expect(2) = 4e-55
Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 3/115 (2%)
Frame = -1
Query: 1587 VSIQYHPGKANFVAEALSRQYSAALIGANSTE---*RSLETCAPDIRSVSEGSRAYIANM 1417
+ I YHPGKAN VA+ALSR+ + + R LE + V G A++
Sbjct: 1287 LGIHYHPGKANVVADALSRKAYCNVAQIRPDQDHLCRELEKLR--LTVVQSG---VPASL 1341
Query: 1416 VV*PTLISRVVEAQRSNPGILLEISRSCGRLDDCPSNYSVGVNGSLRFHRRLCVP 1252
V PTL S++ EAQ+ + GI I R + D +N+S+ G++ R+ VP
Sbjct: 1342 TVQPTLESQIREAQKDDEGIKELIKRIQEKKD---TNFSIDDQGTVWCGPRIFVP 1393
>gb|ABA94769.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1747
Score = 197 bits (502), Expect(2) = 4e-55
Identities = 108/194 (55%), Positives = 126/194 (64%), Gaps = 18/194 (9%)
Frame = -2
Query: 1229 HMS*FTIHPGSTKMYQDVRTTFWWEGLKRDVAE--------------HQRSSGLLQPLPI 1092
H S ++IHPGSTKMYQD++ FWW +KRDVAE HQR +GLLQPLPI
Sbjct: 1354 HESAYSIHPGSTKMYQDIKAYFWWARMKRDVAEYVALCDICQRVKAEHQRLAGLLQPLPI 1413
Query: 1091 PSWKWEDISMVFIDGLPLSR*GHDSVGVIVDRLTKSARFLPVLTSRTTDSLARLLYIREI 912
P WKWE+I M FI GLP + G+DS+ VIVDRLTKSA F+PV TS LA LY+ +
Sbjct: 1414 PEWKWEEIGMDFITGLPRTPNGYDSIWVIVDRLTKSAHFVPVKTSYDGKKLAE-LYMTHV 1472
Query: 911 VRLQGVLVSIVSDRNHCFVTRFWRSLHTATGIDLHIRTTYHPQTNEQTERVNQILEDMLR 732
V G IVSDR F +RFW+ LH A G DL+ T YHPQT+ QTERVNQILEDMLR
Sbjct: 1473 VCRFGCPKKIVSDRGTQFTSRFWKQLHEALGTDLNFSTAYHPQTDGQTERVNQILEDMLR 1532
Query: 731 G----V*QSQDRCL 702
+ DRCL
Sbjct: 1533 ACALDFEGTWDRCL 1546
Score = 46.2 bits (108), Expect(2) = 4e-55
Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 3/115 (2%)
Frame = -1
Query: 1587 VSIQYHPGKANFVAEALSRQYSAALIGANSTE---*RSLETCAPDIRSVSEGSRAYIANM 1417
+ I YHPGKAN VA+ALSR+ + + R LE + V G A++
Sbjct: 1234 LGIHYHPGKANVVADALSRKAYCNVAQIRPDQDHLCRELEKLR--LTVVQSG---VPASL 1288
Query: 1416 VV*PTLISRVVEAQRSNPGILLEISRSCGRLDDCPSNYSVGVNGSLRFHRRLCVP 1252
V PTL S++ EAQ+ + GI I R + D +N+S+ G++ +CVP
Sbjct: 1289 TVQPTLESQIREAQKDDEGIKELIKRIQEKKD---TNFSIDDQGTVWCGPHICVP 1340