BLASTX nr result

ID: Paeonia23_contig00023622 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00023622
         (700 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004305958.1| PREDICTED: uncharacterized protein LOC101308...    98   3e-18
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298...    79   2e-12
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                 75   2e-11
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]        75   2e-11
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal...    74   6e-11
emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|72678...    72   2e-10
dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like ...    71   4e-10
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    70   5e-10
ref|XP_007011414.1| Uncharacterized protein TCM_045593 [Theobrom...    70   9e-10
ref|XP_004174134.1| PREDICTED: uncharacterized protein LOC101232...    70   9e-10
gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thali...    70   9e-10
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta...    68   3e-09
emb|CAB83148.1| putative protein [Arabidopsis thaliana]                67   4e-09
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...    65   2e-08
ref|XP_004173049.1| PREDICTED: putative ribonuclease H protein A...    65   2e-08
dbj|BAB08692.1| non-LTR retroelement reverse transcriptase-like ...    65   3e-08
gb|AAD24652.1| putative non-LTR retroelement reverse transcripta...    65   3e-08
gb|ABE65398.1| hypothetical protein At1g43570 [Arabidopsis thali...    64   4e-08
gb|ABK28140.1| unknown [Arabidopsis thaliana]                          64   4e-08
gb|AAD12028.1| putative non-LTR retroelement reverse transcripta...    64   4e-08

>ref|XP_004305958.1| PREDICTED: uncharacterized protein LOC101308407 [Fragaria vesca
           subsp. vesca]
          Length = 177

 Score = 97.8 bits (242), Expect = 3e-18
 Identities = 52/143 (36%), Positives = 74/143 (51%), Gaps = 1/143 (0%)
 Frame = +3

Query: 204 AKHIWRLVTKEESIWVNKWIWEVRLKSKSFWAVSCPQDCPWYWRKILKFRGRFFGLVKCC 383
           A+HI  L+T + S+W + WI    L+ KSFW VS PQ C W WRK+LK R      +K  
Sbjct: 2   ARHIRILLTDDSSLW-SSWIKVNFLRDKSFWMVSTPQICSWNWRKLLKIRDFIRPSIKHI 60

Query: 384 IGDSNKAFHWYDNWHSLGSLYLRVSTRIIYDFASSLDVKVCSIISNGECRWPSSRSNAVL 563
           IGD    + W+D WH  G L  R+    + +     +  V SI+      WP S ++A+L
Sbjct: 61  IGDGKSTYFWHDYWHPFGPLLPRLGPGAMINSGIPSNALVSSIVKGESWCWPLSTNSAIL 120

Query: 564 EVIDNCFVAL-NVNVEDIYVWLP 629
            V  N    + N + +D  +WLP
Sbjct: 121 RVASNVEGLIPNSSCKDSCIWLP 143


>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
           subsp. vesca]
          Length = 958

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 37/87 (42%), Positives = 44/87 (50%)
 Frame = +3

Query: 210 HIWRLVTKEESIWVNKWIWEVRLKSKSFWAVSCPQDCPWYWRKILKFRGRFFGLVKCCIG 389
           HIW LV+   + W + W+    LK  SFW    P  C W WRK+LK R          IG
Sbjct: 712 HIWNLVSSSSNFWTD-WVKVYLLKGNSFWNAPLPSICSWNWRKLLKIRELCCSFFVNIIG 770

Query: 390 DSNKAFHWYDNWHSLGSLYLRVSTRII 470
           D      W+DNWH LG L LR S+ II
Sbjct: 771 DGRATSLWFDNWHPLGPLTLRWSSNII 797


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 6/164 (3%)
 Frame = +3

Query: 207 KHIWRLVTKEESIWVNKWIWEVRLKSKSFWAVSCPQDC-PWYWRKILKFRGRFFGLVKCC 383
           K IWRLV+++ S+WVN W+W   ++  SFW+ +       W W+K+LK+R     + K  
Sbjct: 462 KLIWRLVSRQSSLWVN-WVWTYIIRKGSFWSANDRSSLGSWMWKKLLKYRDVAKSMCKVE 520

Query: 384 IGDSNKAFHWYDNWHSLGSLYLRVSTRIIYDFASSLDVKVCSIISNGECR-WPSSRSNAV 560
           I   +    WYDNW  LG L    + R   D    L   V +++++   +   ++  N +
Sbjct: 521 IKSGSSTSFWYDNWSQLGQLVDVTNARRTIDMGIPLAATVATVLASHRTKHHRTAIYNKI 580

Query: 561 LEVIDNCFVALNVNVEDIYVWLP----MNNTFPIQSAWNCFRVL 680
              I +          DI++W         +F  +  W+  RV+
Sbjct: 581 EAEIQSILQRERSGAPDIFLWRSSGDNFRQSFITKVTWHNIRVI 624


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 52/146 (35%), Positives = 68/146 (46%), Gaps = 9/146 (6%)
 Frame = +3

Query: 213  IWRLVTKEESIWVNKWIWEVRLKSKSFWAVSCPQDCPWYWRKILKFRGRFFGLVKCCIGD 392
            IWRL   ++S+W + W     L   SFWAV   Q   W W+++L  R      + C +G+
Sbjct: 884  IWRLFVAKDSLWAD-WQHLHHLSRGSFWAVEGGQSDSWTWKRLLSLRPLAHQFLVCKVGN 942

Query: 393  SNKAFHWYDNWHSLGSLYLRVSTRIIYDFASS-----LDVKVCSIISNGECRWPSSRSNA 557
              KA +WYDNW SLG L+     RII D   S     L  KV S  S    R P SRS  
Sbjct: 943  GLKADYWYDNWTSLGPLF-----RIIGDIGPSSLRVPLLAKVASAFSEDGWRLPVSRSAP 997

Query: 558  VLEVIDN-CFVALNVNVE---DIYVW 623
               + D+ C V +    +   D Y W
Sbjct: 998  AKGIHDHLCTVPVPSTAQEDVDRYEW 1023


>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
           gi|7267919|emb|CAB78261.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 662

 Score = 73.6 bits (179), Expect = 6e-11
 Identities = 47/163 (28%), Positives = 72/163 (44%), Gaps = 8/163 (4%)
 Frame = +3

Query: 207 KHIWRLVTKEESIWVNKWIWEVRLKSKSFWAVSCPQDCPWYWRKILKFRGRFFGLVKCCI 386
           K IWR+V++ +S+WV +WI    LK  +FW+        W W+K+LK+R       K  I
Sbjct: 407 KLIWRIVSQGDSLWV-QWIRTYLLKRNTFWSFRSASQGSWMWKKLLKYRDTAKAFSKVDI 465

Query: 387 GDSNKAFHWYDNWHSLGSLYLRVSTRIIYDFASSLDVKVCSIISNGECRWPSSRSNAVLE 566
            +   A  WYD+W S G L   +  R  +D   S    +         R+  + +   +E
Sbjct: 466 RNGETASFWYDDWSSKGRLIDVLGERGQFDMGISKFKTLAEAWDRRRSRYHRAETLNTIE 525

Query: 567 VIDNCFVALNVNVEDIYVWLPMNNTFPIQ--------SAWNCF 671
                     V VED+++W   N+TF  Q         AWN +
Sbjct: 526 QELLLAKQNRVAVEDVFLWKGKNDTFRPQFSAQIWQALAWNIY 568


>emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|7267871|emb|CAB78214.1|
           putative protein [Arabidopsis thaliana]
          Length = 473

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 53/165 (32%), Positives = 70/165 (42%), Gaps = 7/165 (4%)
 Frame = +3

Query: 207 KHIWRLVTKEESIWVNKWIWEVRLKSKSFWAVSCPQDC-PWYWRKILKFRGRFFGLVKCC 383
           K IWR+++  +S+WV KWI    LK  SFWAV        W WRKILKFR     L K  
Sbjct: 138 KLIWRIISHADSLWV-KWIQSSLLKKVSFWAVRENTSLGSWMWRKILKFRDIARTLCKVE 196

Query: 384 IGDSNKAFHWYDNWHSLGSLYLRVSTRIIYDFASSLDVKVCSIISNGECRWPSSRSNAVL 563
           I +  +   WYD+W  LG L      R   D   +    V     N   R    R+N + 
Sbjct: 197 INNGARTSFWYDDWSDLGRLIDSAGDRGAIDLGINKHATVVEAWGNRRRR--RHRTNFLN 254

Query: 564 EVIDNCFVALNV--NVEDIYVWLPMNN----TFPIQSAWNCFRVL 680
            V +   ++ N     ED  +W    N     F  +  WN  R +
Sbjct: 255 RVEERLILSWNSRNQAEDRALWKGKENRFRSIFSTKDTWNHIRTV 299


>dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 489

 Score = 70.9 bits (172), Expect = 4e-10
 Identities = 34/80 (42%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
 Frame = +3

Query: 207 KHIWRLVTKEESIWVNKWIWEVRLKSKSFWAVSCPQDC-PWYWRKILKFRGRFFGLVKCC 383
           K IWR+++  +S+WV KWI    LK  SFWAV        W W+K+LKFR     L K  
Sbjct: 271 KLIWRIISHADSLWV-KWIHATLLKQVSFWAVRENTSLGSWMWKKVLKFRDAAIQLCKAE 329

Query: 384 IGDSNKAFHWYDNWHSLGSL 443
           + +    F WYDNW  +G L
Sbjct: 330 VNNGAHTFFWYDNWSDMGRL 349


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 8/161 (4%)
 Frame = +3

Query: 207  KHIWRLVTKEESIWVNKWIWEVRLKSKSFWAVS-CPQDCPWYWRKILKFRGRFFGLVKCC 383
            K +W++V+   S+WV KW+ +  L++ SFW V        W W+K+LK+R     L K  
Sbjct: 889  KLVWKIVSHSNSLWV-KWVDQHLLRNASFWEVKQTVSQGSWIWKKLLKYREVAKTLSKVE 947

Query: 384  IGDSNKAFHWYDNWHSLGSLYLRVSTRIIYDFASSLDVKVCSIISNGECRWPSSRSNAVL 563
            +G+  +   WYDNW  LG L  R   R + D   S  + V    +N   R      N V 
Sbjct: 948  VGNGKQTSFWYDNWSDLGQLLERTGDRGLIDLGISRRMTVEEAWTN---RRQRRHRNDVY 1004

Query: 564  EVIDNCFVA---LNVNVEDIYVWLPMNN----TFPIQSAWN 665
             VI++            ED  +W   ++    TF  +  W+
Sbjct: 1005 NVIEDALKKSWDTRTETEDKVLWRGKSDVFRTTFSTRDTWH 1045


>ref|XP_007011414.1| Uncharacterized protein TCM_045593 [Theobroma cacao]
           gi|508728327|gb|EOY20224.1| Uncharacterized protein
           TCM_045593 [Theobroma cacao]
          Length = 135

 Score = 69.7 bits (169), Expect = 9e-10
 Identities = 31/90 (34%), Positives = 44/90 (48%)
 Frame = +3

Query: 276 LKSKSFWAVSCPQDCPWYWRKILKFRGRFFGLVKCCIGDSNKAFHWYDNWHSLGSLYLRV 455
           +K ++FW +  PQ C W WRK  K R     L+K  I +  +   W DNWHS G L    
Sbjct: 2   VKGRNFWLIPLPQSCIWIWRKTKKLRSTAIPLIKHVIDNGRRTIFWIDNWHSQGPLLHLY 61

Query: 456 STRIIYDFASSLDVKVCSIISNGECRWPSS 545
           S+ I+     S +  V ++I N    WP +
Sbjct: 62  SSSIMLASGLSKEAGVDNVIRNNSRHWPQT 91


>ref|XP_004174134.1| PREDICTED: uncharacterized protein LOC101232257, partial [Cucumis
           sativus]
          Length = 297

 Score = 69.7 bits (169), Expect = 9e-10
 Identities = 46/159 (28%), Positives = 78/159 (49%), Gaps = 3/159 (1%)
 Frame = +3

Query: 207 KHIWRLVTKEESIWVNKWIWEVRLKSKSFWAVSCPQDCPWYWRKILKFRGRFFGLVKCCI 386
           K +W L+ K  S+WV  W+    LK +S W +       W +R+IL+ +      VK  +
Sbjct: 105 KILWLLLVKSGSLWV-AWVESYILKGRSLWEIDAGVGRSWCFREILRKQDILKAHVKMEV 163

Query: 387 GDSNKAFHWYDNWHSLGSLYLRVSTRIIYDFASSLDVKVCSIIS-NGECRWPSSRSNAVL 563
           G+  K   W   W   G +  +   R+IYD +S  D  +   +  + + RWP    + ++
Sbjct: 164 GNGRKYRVWLVPWIQGGPIIQQFGERVIYDASSRWDASLVDFMGRDDDWRWPLVYLD-LM 222

Query: 564 EVIDNC-FVALNVNVEDIYVWLP-MNNTFPIQSAWNCFR 674
           ++ D    V  + +VED +VW+P  +++F I SAW   R
Sbjct: 223 DIWDRIQGVRPSPSVEDRWVWVPGSHDSFSITSAWETIR 261


>gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thaliana]
          Length = 504

 Score = 69.7 bits (169), Expect = 9e-10
 Identities = 52/165 (31%), Positives = 69/165 (41%), Gaps = 7/165 (4%)
 Frame = +3

Query: 207 KHIWRLVTKEESIWVNKWIWEVRLKSKSFWAVSCPQDC-PWYWRKILKFRGRFFGLVKCC 383
           K IWR+++  +S+WV KWI    LK   FWAV        W WRKILKFR     L K  
Sbjct: 219 KLIWRIISHADSLWV-KWIQSSLLKKVFFWAVRENTSLGSWMWRKILKFRDIARTLCKVE 277

Query: 384 IGDSNKAFHWYDNWHSLGSLYLRVSTRIIYDFASSLDVKVCSIISNGECRWPSSRSNAVL 563
           I +  +   WYD+W  LG L      R   D   +    V     N   R    R+N + 
Sbjct: 278 INNGAQTSFWYDDWSDLGRLIESAGDRGAIDLGINKHATVVEAWGNRRRR--RHRANFLN 335

Query: 564 EVIDNCFVALNV--NVEDIYVWLPMNN----TFPIQSAWNCFRVL 680
            V +   ++ N     ED  +W    N     F  +  WN  R +
Sbjct: 336 RVEERLVLSWNSRNQAEDCALWKGKENRFRSIFSTKDTWNHIRTV 380


>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1277

 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
 Frame = +3

Query: 207  KHIWRLVTKEESIWVNKWIWEVRLKSKSFWAVSCPQDC-PWYWRKILKFRGRFFGLVKCC 383
            K IWRLV+++ S+WVN W+W   ++  SFW+ +       W W+K+L +R     + K  
Sbjct: 1031 KLIWRLVSRQSSLWVN-WVWTYIIRKGSFWSANDRSSLGSWMWKKLLNYRDVAKSMCKVE 1089

Query: 384  IGDSNKAFHWYDNWHSLGSLYLRVSTRIIYDFASSLDVKVCSIISN 521
            I   +    WYDNW  L  L    + R   D    L   V +++++
Sbjct: 1090 IKSGSSTSFWYDNWSQLRQLVDVTNARRTIDMGIPLAATVATVLAS 1135


>emb|CAB83148.1| putative protein [Arabidopsis thaliana]
          Length = 280

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 6/160 (3%)
 Frame = +3

Query: 213 IWRLVTKEESIWVNKWIWEVRLKSKSFWAVSCPQDC-PWYWRKILKFRGRFFGLVKCCIG 389
           IWR+++  +S+WV KWI    LK + FW V        W WRK++KFR     L K  +G
Sbjct: 39  IWRILSHGDSLWV-KWIERFLLKKEPFWTVKENTSAGSWIWRKLIKFRDAAKTLCKVEVG 97

Query: 390 DSNKAFHWYDNWHSLGSLYLRVSTRIIYDFASSLDVKVCSI-ISNGECRWPSSRSNAVLE 566
           +   A  W+D+W  LG LY     R + D   +  + V     +    R  ++  NA+ +
Sbjct: 98  NGELASFWFDSWSPLGRLYDIAGDRGVIDMGINRQMTVADAWRTRHRRRHRNNALNAIED 157

Query: 567 VIDNCFVALNVNVEDIYVWLPMNN----TFPIQSAWNCFR 674
           V+ + ++    +  D  +W   ++     F  +  WN  R
Sbjct: 158 VLHSQWLE-RTDRRDKIMWRGTHDIFKEKFSTKDTWNHIR 196


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
 Frame = +3

Query: 207  KHIWRLVTKEESIWVNKWIWEVRLKSKSFWAVSCPQDC-PWYWRKILKFRGRFFGLVKCC 383
            K IWRL++ + S+WV  WIW   ++  +FW+ +       W W+K+LK+R     + K  
Sbjct: 1186 KLIWRLLSTQPSLWVT-WIWTFIIRKGTFWSANERSSLGSWMWKKLLKYRELAKSMHKVE 1244

Query: 384  IGDSNKAFHWYDNWHSLGSLYLRVSTRIIYDFASSLDVKVCSIISNGECR 533
            + + +    WYD+W  LG L     TR + D    L+  + +++   + R
Sbjct: 1245 VRNGSSTSFWYDHWSHLGRLLDITGTRRVIDLGIPLETNLETVLRTHQHR 1294


>ref|XP_004173049.1| PREDICTED: putative ribonuclease H protein At1g65750-like, partial
           [Cucumis sativus]
          Length = 647

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 3/159 (1%)
 Frame = +3

Query: 207 KHIWRLVTKEESIWVNKWIWEVRLKSKSFWAVSCPQDCPWYWRKILKFRGRFFGLVKCCI 386
           K +W L+ K  S+WV  W+    LK +S W +       W +R IL+ R      V+  +
Sbjct: 341 KILWLLLVKSGSLWV-AWVEAYILKGRSLWEIDAGAGRSWCFRAILRKRDILKAHVEMKL 399

Query: 387 GDSNKAFHWYDNWHSLGSLYLRVSTRIIYDFASSLDVKVCSII-SNGECRWPSSRSNAVL 563
           G+  K     D W   G +      R+IYD  S  D ++   +  +G+ RW S  S  ++
Sbjct: 400 GNVRKCRMLLDAWIQGGMIIQLFGERVIYDAGSRRDARLMDFMGGDGDWRW-SLVSLDLM 458

Query: 564 EVIDNC-FVALNVNVEDIYVWLPMN-NTFPIQSAWNCFR 674
           ++ D    V L+ +V+D +VW+    ++F I SAW   R
Sbjct: 459 DIWDMIQGVRLSPSVDDRWVWVSGRLDSFSIVSAWETIR 497


>dbj|BAB08692.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana] gi|93007380|gb|ABE97193.1|
           hypothetical protein At5g13655 [Arabidopsis thaliana]
          Length = 385

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 48/176 (27%), Positives = 79/176 (44%), Gaps = 6/176 (3%)
 Frame = +3

Query: 165 SHQVCLLI**RVWAKHIWRLVTKEESIWVNKWIWEVRLKSKSFWAVS-CPQDCPWYWRKI 341
           +++VC+L       K IWR+++ + S+WV+ W+ +  L+  S WAV        W W+K+
Sbjct: 41  TNKVCML-------KLIWRILSAKGSLWVD-WVKKHLLRGGSLWAVKETSSRGSWIWKKL 92

Query: 342 LKFRGRFFGLVKCCIGDSNKAFHWYDNWHSLGSLYLRVSTRIIYDFASSLDVKVCS-IIS 518
           LK+R +     K  + +      WYD+W SLG LY +   R   D     D  + S I++
Sbjct: 93  LKYRDKAKCFHKVDVRNGESTSFWYDSWSSLGCLYDKFGERGCIDMGIPKDSTLSSAIMT 152

Query: 519 NGECRWPSSRSNAVLEVIDNCFVALNVNVEDIYVWLPMNN----TFPIQSAWNCFR 674
               +      NAV   I     +  V   D+ +W    +    TF  +  W+  R
Sbjct: 153 TRRRKHRQPLLNAVETEIQKQKQSRIVTERDVALWKGKEDGFHPTFLSKETWSQIR 208


>gb|AAD24652.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 977

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
 Frame = +3

Query: 207  KHIWRLVTKEESIWVNKWIWEVRLKSKSFWAVSCPQDC-PWYWRKILKFRGRFFGLVKCC 383
            K +W++V+   S+WV KWI +  LK+++FW V        W WRK++KFR +     K  
Sbjct: 846  KVVWKIVSHGNSLWV-KWIEKFLLKNETFWFVKENTTLGSWMWRKLIKFREKAKNFCKVE 904

Query: 384  IGDSNKAFHWYDNWHSLGSLYLRVSTRIIYD 476
            +   N    WYD+W ++G +  +V  R + D
Sbjct: 905  VNKGNCTSFWYDDWSNMGQMVEKVGDRGMID 935


>gb|ABE65398.1| hypothetical protein At1g43570 [Arabidopsis thaliana]
          Length = 348

 Score = 64.3 bits (155), Expect = 4e-08
 Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 7/167 (4%)
 Frame = +3

Query: 207 KHIWRLVTKEESIWVNKWIWEVRLKSKSFWAVSCPQ-DCPWYWRKILKFRGRFFGLVKCC 383
           K IWRL+  + S+W  +W+    ++  +FWA+        W WRK+L  R       K  
Sbjct: 113 KLIWRLLASQTSLW-GQWVQTYLIRRNNFWAIKASSYQGSWMWRKLLTLRDVARSFHKKE 171

Query: 384 IGDSNKAFHWYDNWHSLGSLYLRVSTRIIYDFASSLDVKVCSIISNGECRWPSSRSNAVL 563
           I +      WYD+W S+G+L   +  R   D   +    + ++ +    R    R + ++
Sbjct: 172 IHNGRNTSFWYDHWSSMGTLVDVLGARGCIDLGITTTTNMENVFTTRRSR--KHRGDLLV 229

Query: 564 EV---IDNCFVALNVNVEDIYVWLP---MNNTFPIQSAWNCFRVLFP 686
            +   I+        ++EDI +W P      TF  +  W   R+  P
Sbjct: 230 RIEAEIEAAKTRHQPDIEDIDLWKPSTGYKKTFSTRETWKLIRMAEP 276


>gb|ABK28140.1| unknown [Arabidopsis thaliana]
          Length = 349

 Score = 64.3 bits (155), Expect = 4e-08
 Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 7/167 (4%)
 Frame = +3

Query: 207 KHIWRLVTKEESIWVNKWIWEVRLKSKSFWAVSCPQ-DCPWYWRKILKFRGRFFGLVKCC 383
           K IWRL+  + S+W  +W+    ++  +FWA+        W WRK+L  R       K  
Sbjct: 113 KLIWRLLASQTSLW-GQWVQTYLIRRNNFWAIKASSYQGSWMWRKLLTLRDVARSFHKKE 171

Query: 384 IGDSNKAFHWYDNWHSLGSLYLRVSTRIIYDFASSLDVKVCSIISNGECRWPSSRSNAVL 563
           I +      WYD+W S+G+L   +  R   D   +    + ++ +    R    R + ++
Sbjct: 172 IHNGRNTSFWYDHWSSMGTLVDVLGARGCIDLGITTTTNMENVFTTRRSR--KHRGDLLV 229

Query: 564 EV---IDNCFVALNVNVEDIYVWLP---MNNTFPIQSAWNCFRVLFP 686
            +   I+        ++EDI +W P      TF  +  W   R+  P
Sbjct: 230 RIEAEIEAAKTRHQPDIEDIDLWKPSTGYKKTFSTRETWKLIRMAEP 276


>gb|AAD12028.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1447

 Score = 64.3 bits (155), Expect = 4e-08
 Identities = 45/168 (26%), Positives = 70/168 (41%), Gaps = 12/168 (7%)
 Frame = +3

Query: 207  KHIWRLVTKEESIWVNKWIWEVRLKSKSFWAVSCPQDC-PWYWRKILKFRGRFFGLVKCC 383
            K IWR+++  +S+WV KWI    LK+ SFW +        W W+K+LK+R       K  
Sbjct: 1113 KLIWRILSHGDSLWV-KWIETNLLKNNSFWIIKSSTTMGSWMWKKLLKYREVAKTFSKIE 1171

Query: 384  IGDSNKAFHWYDNWHSLGSLYLRVSTRIIYDFASSLDVKVCSIISNGECRWPSSRSNA-- 557
            + +  +   WYD+W  +G +   +  + I D     D  V  +       W + RS    
Sbjct: 1172 VHNGQRTSFWYDDWSCMGRIMNFIGDKGIIDLGIKRDKLVAEV-------WDTHRSRRHI 1224

Query: 558  --VLEVIDNCFVALNVNVE---DIYVWLPMNN----TFPIQSAWNCFR 674
               L  ++N       N +   D  VW   N+     F  +  WN  R
Sbjct: 1225 TDYLNQVENVIATSKANRKEKADDVVWRGRNDIYKPQFSTRDTWNNIR 1272


Top