BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00023584
         (426 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   216   3e-54
emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]   210   1e-52
ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D sub...   204   8e-51
ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D sub...   201   9e-50
ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-...   196   3e-48
ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricin...   194   1e-47
ref|XP_007210915.1| hypothetical protein PRUPE_ppa000278mg [Prun...   187   1e-45
emb|CBI34757.3| unnamed protein product [Vitis vinifera]              180   2e-43
ref|XP_006573757.1| PREDICTED: DNA-directed RNA polymerase IV su...   178   6e-43
ref|XP_006573756.1| PREDICTED: DNA-directed RNA polymerase IV su...   178   6e-43
ref|XP_006573755.1| PREDICTED: DNA-directed RNA polymerase IV su...   178   6e-43
ref|XP_006573754.1| PREDICTED: DNA-directed RNA polymerase IV su...   178   6e-43
ref|XP_006590533.1| PREDICTED: DNA-directed RNA polymerase IV su...   168   6e-40
ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D sub...   164   1e-38
ref|XP_004511607.1| PREDICTED: DNA-directed RNA polymerase D sub...   164   1e-38
ref|XP_007158454.1| hypothetical protein PHAVU_002G153700g [Phas...   161   1e-37
ref|XP_007158453.1| hypothetical protein PHAVU_002G153700g [Phas...   161   1e-37
ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV su...   160   2e-37
ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV su...   160   2e-37
ref|XP_003611164.1| DNA-directed RNA polymerase subunit beta [Me...   158   8e-37

>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D
           subunit 1-like [Vitis vinifera]
          Length = 1560

 Score =  216 bits (549), Expect = 3e-54
 Identities = 103/141 (73%), Positives = 122/141 (86%)
 Frame = -3

Query: 424 QVHYLLKDVDLRFIEEFVSRTDSLFLNSFLVTPNCHRITEVTHAFSNGQRLMFDERTRAY 245
           QVHYLLKD+D  FI+EFVSR DS FLN   VTPN HR+TE+THA SNGQ L+FD+ +RAY
Sbjct: 238 QVHYLLKDIDPGFIKEFVSRMDSFFLNCLPVTPNNHRVTEITHALSNGQTLIFDQHSRAY 297

Query: 244 RKLVDFRGMANELGSRVLECLKLSKLISEKPSTTDSSSNVSGLKWMKEVVLGKRTDHSFR 65
           +KLVDFRG ANEL  RVL+CLK SKL SEK ++ DS+S +SGLKW+KEV+LGKRT+HSFR
Sbjct: 298 KKLVDFRGTANELSCRVLDCLKTSKLRSEKSTSKDSASKMSGLKWIKEVLLGKRTNHSFR 357

Query: 64  MVVVGDPKIKLSEIGIPCHIA 2
           M+VVGDPK++LSEIGIPCHIA
Sbjct: 358 MIVVGDPKLRLSEIGIPCHIA 378


>emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]
          Length = 1393

 Score =  210 bits (535), Expect = 1e-52
 Identities = 103/144 (71%), Positives = 122/144 (84%), Gaps = 3/144 (2%)
 Frame = -3

Query: 424 QVHYLLKDVDLRFIEEFVSRTDSLFLNSFLVTPNCHRITEVTHAFSNGQRLMFDERTRAY 245
           QVHYLLKD+D  FI+EFVSR DS FLN   VTPN HR+TE+THA SNGQ L+FD+ +RAY
Sbjct: 205 QVHYLLKDIDPGFIKEFVSRMDSFFLNCLPVTPNNHRVTEITHALSNGQTLIFDQHSRAY 264

Query: 244 RKLVDFRGMANELGSRVLECLKLSK---LISEKPSTTDSSSNVSGLKWMKEVVLGKRTDH 74
           +KLVDFRG ANEL  RVL+CLK SK   L SEK ++ DS+S +SGLKW+KEV+LGKRT+H
Sbjct: 265 KKLVDFRGTANELSCRVLDCLKTSKASNLRSEKSTSKDSASKMSGLKWIKEVLLGKRTNH 324

Query: 73  SFRMVVVGDPKIKLSEIGIPCHIA 2
           SFRM+VVGDPK++LSEIGIPCHIA
Sbjct: 325 SFRMIVVGDPKLRLSEIGIPCHIA 348


>ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Cucumis
           sativus] gi|449494342|ref|XP_004159519.1| PREDICTED: LOW
           QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
           1-like [Cucumis sativus]
          Length = 1469

 Score =  204 bits (520), Expect = 8e-51
 Identities = 99/153 (64%), Positives = 123/153 (80%), Gaps = 12/153 (7%)
 Frame = -3

Query: 424 QVHYLLKDVDLRFIEEFVSRTDSLFLNSFLVTPNCHRITEVTHAFSNGQRLMFDERTRAY 245
           QVHYLLKD+D +F+++FV   DSLFLNSF VTPN HR+TE+ H+FSNGQRL+FDERTRAY
Sbjct: 205 QVHYLLKDIDPKFLKKFVPAIDSLFLNSFPVTPNSHRVTEMAHSFSNGQRLIFDERTRAY 264

Query: 244 RKLVDFRGMANELGSRVLECLKLSKLISE------------KPSTTDSSSNVSGLKWMKE 101
           +K+VDFRG ANELGSRVL+CLK+SK I              +    D++++ SGL+W+K+
Sbjct: 265 KKVVDFRGTANELGSRVLDCLKISKAIYNIFVFCLNHVNYYQKKIKDTATSSSGLRWIKD 324

Query: 100 VVLGKRTDHSFRMVVVGDPKIKLSEIGIPCHIA 2
           VVLGKR+DH FRMVVVGDP I+LSEIGIPCH+A
Sbjct: 325 VVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVA 357


>ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Fragaria
           vesca subsp. vesca]
          Length = 1438

 Score =  201 bits (511), Expect = 9e-50
 Identities = 102/151 (67%), Positives = 117/151 (77%), Gaps = 10/151 (6%)
 Frame = -3

Query: 424 QVHYLLKDVDLRFIEEFVSRTDSLFLNSFLVTPNCHRITEVTHAFSNGQRLMFDERTRAY 245
           QVH+LL DVD  FI +FV  T SL L+ FLVTPNCHR+TEV ++F+NGQ LMFD+RTRAY
Sbjct: 184 QVHFLLSDVDSNFITKFVPTTSSLSLDCFLVTPNCHRVTEVMYSFNNGQSLMFDDRTRAY 243

Query: 244 RKLVDFRGMANELGSRVLECLKLSKLISEK----------PSTTDSSSNVSGLKWMKEVV 95
           RKLVDFRG ANELGSRVL+CLK+SK+  EK              DS S  SGL+W+K+VV
Sbjct: 244 RKLVDFRGTANELGSRVLDCLKISKINKEKTGRDSISVEQQKIKDSPSRTSGLRWIKDVV 303

Query: 94  LGKRTDHSFRMVVVGDPKIKLSEIGIPCHIA 2
           LGKR+DH FRMVVVGDP IKLSEIGIP HIA
Sbjct: 304 LGKRSDHCFRMVVVGDPNIKLSEIGIPRHIA 334


>ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-B, putative [Theobroma
           cacao] gi|508777356|gb|EOY24612.1| DNA-directed RNA
           polymerase II subunit RPB1-B, putative [Theobroma cacao]
          Length = 1484

 Score =  196 bits (498), Expect = 3e-48
 Identities = 97/153 (63%), Positives = 117/153 (76%), Gaps = 12/153 (7%)
 Frame = -3

Query: 424 QVHYLLKDVDLRFIEEFVSRTDSLFLNSFLVTPNCHRITEVTHAFSNGQRLMFDERTRAY 245
           QV YLLKDVD  FI++FV   DS+FLN F VTPN HR+TE+ HA SNGQRL+FD+RTR Y
Sbjct: 207 QVRYLLKDVDPEFIKKFVLSMDSIFLNCFPVTPNSHRVTEIMHASSNGQRLIFDQRTRVY 266

Query: 244 RKLVDFRGMANELGSRVLECLKLSKLISEKPS------------TTDSSSNVSGLKWMKE 101
           +KL DFRG+ANEL S VLECLK+SKL  EKPS              DS+SN+SGL++MK+
Sbjct: 267 KKLADFRGIANELSSHVLECLKISKLHLEKPSNEESALVLAQKRNKDSASNMSGLRYMKD 326

Query: 100 VVLGKRTDHSFRMVVVGDPKIKLSEIGIPCHIA 2
           V+LGKR DH FRMV+ G+P +KLSEI IPCH+A
Sbjct: 327 VILGKRNDHCFRMVLTGNPNLKLSEISIPCHVA 359


>ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricinus communis]
           gi|223549595|gb|EEF51083.1| DNA-directed RNA polymerase,
           putative [Ricinus communis]
          Length = 1475

 Score =  194 bits (492), Expect = 1e-47
 Identities = 97/152 (63%), Positives = 118/152 (77%), Gaps = 11/152 (7%)
 Frame = -3

Query: 424 QVHYLLKDVDLRFIEEFVSRTDSLFLNSFLVTPNCHRITEVTHAFSNGQRLMFDERTRAY 245
           QV +LL+++D  FI +FV + DS+FLN F VTPNCHR+TEVTHAFSNGQRL+FD+RTRAY
Sbjct: 200 QVIHLLENIDPNFIRKFVLKRDSIFLNCFSVTPNCHRVTEVTHAFSNGQRLVFDDRTRAY 259

Query: 244 RKLVDFRGMANELGSRVLECLKLSKLISEKP-----------STTDSSSNVSGLKWMKEV 98
           +K+VDFRG+A EL  RVL+CLK SK+  +K               DSSS+ SGL+W+K+V
Sbjct: 260 KKMVDFRGIAKELSFRVLDCLKTSKINPDKSVNNDDYMALQRKMNDSSSSSSGLRWIKDV 319

Query: 97  VLGKRTDHSFRMVVVGDPKIKLSEIGIPCHIA 2
           VLGKR D+SFRMVVVGDP IK SEIGIPC IA
Sbjct: 320 VLGKRNDNSFRMVVVGDPNIKFSEIGIPCPIA 351


>ref|XP_007210915.1| hypothetical protein PRUPE_ppa000278mg [Prunus persica]
           gi|462406650|gb|EMJ12114.1| hypothetical protein
           PRUPE_ppa000278mg [Prunus persica]
          Length = 1356

 Score =  187 bits (475), Expect = 1e-45
 Identities = 94/141 (66%), Positives = 107/141 (75%)
 Frame = -3

Query: 424 QVHYLLKDVDLRFIEEFVSRTDSLFLNSFLVTPNCHRITEVTHAFSNGQRLMFDERTRAY 245
           QVHYLLKDVD +FIE+ V +T+SL + SFLVTPNCHR+TEV H+FSNGQRLMFDERTRAY
Sbjct: 198 QVHYLLKDVDTKFIEKIVPKTNSLSMGSFLVTPNCHRVTEVMHSFSNGQRLMFDERTRAY 257

Query: 244 RKLVDFRGMANELGSRVLECLKLSKLISEKPSTTDSSSNVSGLKWMKEVVLGKRTDHSFR 65
           RKLVDF+G+ANELGS                      S  SGL+W+K+VVLGKR+DH FR
Sbjct: 258 RKLVDFKGVANELGSH-------------------DPSKTSGLRWIKDVVLGKRSDHCFR 298

Query: 64  MVVVGDPKIKLSEIGIPCHIA 2
            VVVGDP IKLSEIGIPC IA
Sbjct: 299 TVVVGDPNIKLSEIGIPCQIA 319


>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
          Length = 1359

 Score =  180 bits (457), Expect = 2e-43
 Identities = 90/141 (63%), Positives = 107/141 (75%)
 Frame = -3

Query: 424 QVHYLLKDVDLRFIEEFVSRTDSLFLNSFLVTPNCHRITEVTHAFSNGQRLMFDERTRAY 245
           QVHYLLKD+D  FI+EFVSR DS FLN   VTPN HR+TE+THA SNGQ L+FD+ +RAY
Sbjct: 200 QVHYLLKDIDPGFIKEFVSRMDSFFLNCLPVTPNNHRVTEITHALSNGQTLIFDQHSRAY 259

Query: 244 RKLVDFRGMANELGSRVLECLKLSKLISEKPSTTDSSSNVSGLKWMKEVVLGKRTDHSFR 65
           +KLVDFRG ANEL                   +  S+S +SGLKW+KEV+LGKRT+HSFR
Sbjct: 260 KKLVDFRGTANEL-------------------SCHSASKMSGLKWIKEVLLGKRTNHSFR 300

Query: 64  MVVVGDPKIKLSEIGIPCHIA 2
           M+VVGDPK++LSEIGIPCHIA
Sbjct: 301 MIVVGDPKLRLSEIGIPCHIA 321


>ref|XP_006573757.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X4
           [Glycine max]
          Length = 1381

 Score =  178 bits (452), Expect = 6e-43
 Identities = 90/152 (59%), Positives = 114/152 (75%), Gaps = 11/152 (7%)
 Frame = -3

Query: 424 QVHYLLKDVDLRFIEEFVSRTDSLFLNSFLVTPNCHRITEVTHAFSNGQRLMFDERTRAY 245
           QV+YLL DVD  FIE+++ R + L LN F VTPNCHR+TEV +A S+G RL FD+RTR+ 
Sbjct: 113 QVNYLLNDVDPDFIEKYIPRKNLLCLNCFPVTPNCHRVTEVPYAISSGSRLSFDDRTRSC 172

Query: 244 RKLVDFRGMANELGSRVLECLKLSKLISEKPSTT-----------DSSSNVSGLKWMKEV 98
           +KLVDFRG ANEL SRVL+CL++SKL  +K   +           +++ N SGL+W+K+V
Sbjct: 173 KKLVDFRGTANELSSRVLDCLRISKLNPDKTPNSIFADIQQRKIGENAFNSSGLRWIKDV 232

Query: 97  VLGKRTDHSFRMVVVGDPKIKLSEIGIPCHIA 2
           VLGKR D SFR VVVGDP ++LSEIGIPCHIA
Sbjct: 233 VLGKRNDSSFRTVVVGDPDLELSEIGIPCHIA 264


>ref|XP_006573756.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X3
           [Glycine max]
          Length = 1455

 Score =  178 bits (452), Expect = 6e-43
 Identities = 90/152 (59%), Positives = 114/152 (75%), Gaps = 11/152 (7%)
 Frame = -3

Query: 424 QVHYLLKDVDLRFIEEFVSRTDSLFLNSFLVTPNCHRITEVTHAFSNGQRLMFDERTRAY 245
           QV+YLL DVD  FIE+++ R + L LN F VTPNCHR+TEV +A S+G RL FD+RTR+ 
Sbjct: 190 QVNYLLNDVDPDFIEKYIPRKNLLCLNCFPVTPNCHRVTEVPYAISSGSRLSFDDRTRSC 249

Query: 244 RKLVDFRGMANELGSRVLECLKLSKLISEKPSTT-----------DSSSNVSGLKWMKEV 98
           +KLVDFRG ANEL SRVL+CL++SKL  +K   +           +++ N SGL+W+K+V
Sbjct: 250 KKLVDFRGTANELSSRVLDCLRISKLNPDKTPNSIFADIQQRKIGENAFNSSGLRWIKDV 309

Query: 97  VLGKRTDHSFRMVVVGDPKIKLSEIGIPCHIA 2
           VLGKR D SFR VVVGDP ++LSEIGIPCHIA
Sbjct: 310 VLGKRNDSSFRTVVVGDPDLELSEIGIPCHIA 341


>ref|XP_006573755.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
           [Glycine max]
          Length = 1457

 Score =  178 bits (452), Expect = 6e-43
 Identities = 90/152 (59%), Positives = 114/152 (75%), Gaps = 11/152 (7%)
 Frame = -3

Query: 424 QVHYLLKDVDLRFIEEFVSRTDSLFLNSFLVTPNCHRITEVTHAFSNGQRLMFDERTRAY 245
           QV+YLL DVD  FIE+++ R + L LN F VTPNCHR+TEV +A S+G RL FD+RTR+ 
Sbjct: 190 QVNYLLNDVDPDFIEKYIPRKNLLCLNCFPVTPNCHRVTEVPYAISSGSRLSFDDRTRSC 249

Query: 244 RKLVDFRGMANELGSRVLECLKLSKLISEKPSTT-----------DSSSNVSGLKWMKEV 98
           +KLVDFRG ANEL SRVL+CL++SKL  +K   +           +++ N SGL+W+K+V
Sbjct: 250 KKLVDFRGTANELSSRVLDCLRISKLNPDKTPNSIFADIQQRKIGENAFNSSGLRWIKDV 309

Query: 97  VLGKRTDHSFRMVVVGDPKIKLSEIGIPCHIA 2
           VLGKR D SFR VVVGDP ++LSEIGIPCHIA
Sbjct: 310 VLGKRNDSSFRTVVVGDPDLELSEIGIPCHIA 341


>ref|XP_006573754.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
           [Glycine max]
          Length = 1458

 Score =  178 bits (452), Expect = 6e-43
 Identities = 90/152 (59%), Positives = 114/152 (75%), Gaps = 11/152 (7%)
 Frame = -3

Query: 424 QVHYLLKDVDLRFIEEFVSRTDSLFLNSFLVTPNCHRITEVTHAFSNGQRLMFDERTRAY 245
           QV+YLL DVD  FIE+++ R + L LN F VTPNCHR+TEV +A S+G RL FD+RTR+ 
Sbjct: 190 QVNYLLNDVDPDFIEKYIPRKNLLCLNCFPVTPNCHRVTEVPYAISSGSRLSFDDRTRSC 249

Query: 244 RKLVDFRGMANELGSRVLECLKLSKLISEKPSTT-----------DSSSNVSGLKWMKEV 98
           +KLVDFRG ANEL SRVL+CL++SKL  +K   +           +++ N SGL+W+K+V
Sbjct: 250 KKLVDFRGTANELSSRVLDCLRISKLNPDKTPNSIFADIQQRKIGENAFNSSGLRWIKDV 309

Query: 97  VLGKRTDHSFRMVVVGDPKIKLSEIGIPCHIA 2
           VLGKR D SFR VVVGDP ++LSEIGIPCHIA
Sbjct: 310 VLGKRNDSSFRTVVVGDPDLELSEIGIPCHIA 341


>ref|XP_006590533.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Glycine
           max]
          Length = 1369

 Score =  168 bits (426), Expect = 6e-40
 Identities = 85/152 (55%), Positives = 110/152 (72%), Gaps = 11/152 (7%)
 Frame = -3

Query: 424 QVHYLLKDVDLRFIEEFVSRTDSLFLNSFLVTPNCHRITEVTHAFSNGQRLMFDERTRAY 245
           QV  LL  VD  FIE+++ R + L+LN F VTPNCHR+TEV +A S+G RL FD+RTR+ 
Sbjct: 104 QVLNLLNGVDPDFIEKYIPRKNLLYLNCFPVTPNCHRVTEVPYAISSGSRLSFDDRTRSC 163

Query: 244 RKLVDFRGMANELGSRVLECLKLSKLISEKPSTT-----------DSSSNVSGLKWMKEV 98
           +KLVDFRG  NEL SRVL+CL++SKL  +K   +           +++ N SGL+W+K+V
Sbjct: 164 KKLVDFRGTPNELSSRVLDCLRISKLNPDKTPNSIFADIQQRKIGENACNSSGLRWIKDV 223

Query: 97  VLGKRTDHSFRMVVVGDPKIKLSEIGIPCHIA 2
           VLGKR D S R VVVGDP ++LSE+GIPCHIA
Sbjct: 224 VLGKRNDSSLRTVVVGDPDLELSEVGIPCHIA 255


>ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X5
           [Cicer arietinum]
          Length = 1474

 Score =  164 bits (415), Expect = 1e-38
 Identities = 84/152 (55%), Positives = 106/152 (69%), Gaps = 11/152 (7%)
 Frame = -3

Query: 424 QVHYLLKDVDLRFIEEFVSRTDSLFLNSFLVTPNCHRITEVTHAFSNGQRLMFDERTRAY 245
           QV  +L  VD  FI++++ R D + L+ FLV PNCHR+TEV H  S G  L FD RTRA 
Sbjct: 201 QVENILSGVDSNFIKKYIPRMDLVALSCFLVAPNCHRVTEVPHRLSGGYPLSFDNRTRAC 260

Query: 244 RKLVDFRGMANELGSRVLECLKLSKLISEK-PSTT----------DSSSNVSGLKWMKEV 98
           +KLVDFRG ANEL SRVL+CL+ SK+  +K PS            +++ N SGL+WMK++
Sbjct: 261 KKLVDFRGTANELSSRVLDCLRFSKINPDKTPSNVFTEIQLRKVGENACNSSGLRWMKDI 320

Query: 97  VLGKRTDHSFRMVVVGDPKIKLSEIGIPCHIA 2
           VLGKR D SFR VVVGDP ++LSEIG+PC IA
Sbjct: 321 VLGKRNDSSFRTVVVGDPDLELSEIGLPCQIA 352


>ref|XP_004511607.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X1
           [Cicer arietinum] gi|502160026|ref|XP_004511608.1|
           PREDICTED: DNA-directed RNA polymerase D subunit 1-like
           isoform X2 [Cicer arietinum]
           gi|502160029|ref|XP_004511609.1| PREDICTED: DNA-directed
           RNA polymerase D subunit 1-like isoform X3 [Cicer
           arietinum] gi|502160032|ref|XP_004511610.1| PREDICTED:
           DNA-directed RNA polymerase D subunit 1-like isoform X4
           [Cicer arietinum]
          Length = 1475

 Score =  164 bits (415), Expect = 1e-38
 Identities = 84/152 (55%), Positives = 106/152 (69%), Gaps = 11/152 (7%)
 Frame = -3

Query: 424 QVHYLLKDVDLRFIEEFVSRTDSLFLNSFLVTPNCHRITEVTHAFSNGQRLMFDERTRAY 245
           QV  +L  VD  FI++++ R D + L+ FLV PNCHR+TEV H  S G  L FD RTRA 
Sbjct: 201 QVENILSGVDSNFIKKYIPRMDLVALSCFLVAPNCHRVTEVPHRLSGGYPLSFDNRTRAC 260

Query: 244 RKLVDFRGMANELGSRVLECLKLSKLISEK-PSTT----------DSSSNVSGLKWMKEV 98
           +KLVDFRG ANEL SRVL+CL+ SK+  +K PS            +++ N SGL+WMK++
Sbjct: 261 KKLVDFRGTANELSSRVLDCLRFSKINPDKTPSNVFTEIQLRKVGENACNSSGLRWMKDI 320

Query: 97  VLGKRTDHSFRMVVVGDPKIKLSEIGIPCHIA 2
           VLGKR D SFR VVVGDP ++LSEIG+PC IA
Sbjct: 321 VLGKRNDSSFRTVVVGDPDLELSEIGLPCQIA 352


>ref|XP_007158454.1| hypothetical protein PHAVU_002G153700g [Phaseolus vulgaris]
           gi|561031869|gb|ESW30448.1| hypothetical protein
           PHAVU_002G153700g [Phaseolus vulgaris]
          Length = 1464

 Score =  161 bits (407), Expect = 1e-37
 Identities = 81/143 (56%), Positives = 104/143 (72%), Gaps = 2/143 (1%)
 Frame = -3

Query: 424 QVHYLLKDVDLRFIEEFVSRTDSLFLNSFLVTPNCHRITEVTHAFSNGQRLMFDERTRAY 245
           QV  LL DVD  FIE++V R + + LN F VTPNCHR+TEV +A SNG RL FD+RTR+ 
Sbjct: 197 QVTSLLNDVDPNFIEKYVPRNNLITLNCFPVTPNCHRVTEVPYAISNGNRLSFDDRTRSC 256

Query: 244 RKLVDFRGMANELGSRVLECLKLSKLIS--EKPSTTDSSSNVSGLKWMKEVVLGKRTDHS 71
           +KLVDFRG ANEL SR+        + +  +K    +++ N SGL+W+K+V+LGKR D +
Sbjct: 257 KKLVDFRGTANELSSRLNPDKTPISIFADIQKKKVAENACNSSGLRWIKDVILGKRNDST 316

Query: 70  FRMVVVGDPKIKLSEIGIPCHIA 2
           FR VVVGDP ++LSEIGIPCHIA
Sbjct: 317 FRTVVVGDPSLELSEIGIPCHIA 339


>ref|XP_007158453.1| hypothetical protein PHAVU_002G153700g [Phaseolus vulgaris]
           gi|561031868|gb|ESW30447.1| hypothetical protein
           PHAVU_002G153700g [Phaseolus vulgaris]
          Length = 1463

 Score =  161 bits (407), Expect = 1e-37
 Identities = 81/143 (56%), Positives = 104/143 (72%), Gaps = 2/143 (1%)
 Frame = -3

Query: 424 QVHYLLKDVDLRFIEEFVSRTDSLFLNSFLVTPNCHRITEVTHAFSNGQRLMFDERTRAY 245
           QV  LL DVD  FIE++V R + + LN F VTPNCHR+TEV +A SNG RL FD+RTR+ 
Sbjct: 197 QVTSLLNDVDPNFIEKYVPRNNLITLNCFPVTPNCHRVTEVPYAISNGNRLSFDDRTRSC 256

Query: 244 RKLVDFRGMANELGSRVLECLKLSKLIS--EKPSTTDSSSNVSGLKWMKEVVLGKRTDHS 71
           +KLVDFRG ANEL SR+        + +  +K    +++ N SGL+W+K+V+LGKR D +
Sbjct: 257 KKLVDFRGTANELSSRLNPDKTPISIFADIQKKKVAENACNSSGLRWIKDVILGKRNDST 316

Query: 70  FRMVVVGDPKIKLSEIGIPCHIA 2
           FR VVVGDP ++LSEIGIPCHIA
Sbjct: 317 FRTVVVGDPSLELSEIGIPCHIA 339


>ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
           [Citrus sinensis] gi|568847098|ref|XP_006477377.1|
           PREDICTED: DNA-directed RNA polymerase IV subunit 1-like
           isoform X3 [Citrus sinensis]
           gi|568847100|ref|XP_006477378.1| PREDICTED: DNA-directed
           RNA polymerase IV subunit 1-like isoform X4 [Citrus
           sinensis]
          Length = 1443

 Score =  160 bits (404), Expect = 2e-37
 Identities = 85/151 (56%), Positives = 102/151 (67%), Gaps = 10/151 (6%)
 Frame = -3

Query: 424 QVHYLLKDVDLRFIEEFVSRTDSLFLNSFLVTPNCHRITEVTHAFSNGQRLMFDERTRAY 245
           QV YLLKDVD    EEF+   D+ FL  F VTPN HR+TEV HAFS+ ++L FD  TR  
Sbjct: 198 QVSYLLKDVDPSIREEFILSKDAPFLKCFPVTPNNHRVTEVPHAFSHEKKLFFDNWTRHL 257

Query: 244 RKLVDFRGMANELGSRVLECLKLSKLISEKPSTTDSS----------SNVSGLKWMKEVV 95
           +K+VD+RG   EL   V +CLK+SKL  +K S  DS+          SN SGL+W+K+VV
Sbjct: 258 KKMVDYRGRDIELSHLVQDCLKISKLHLDKSSRKDSAEVRQKKNIDISNSSGLRWIKDVV 317

Query: 94  LGKRTDHSFRMVVVGDPKIKLSEIGIPCHIA 2
           LGKR D  FRMVV GDP IKL EIGIPCH+A
Sbjct: 318 LGKRNDDCFRMVVTGDPNIKLKEIGIPCHVA 348


>ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
           [Citrus sinensis]
          Length = 1481

 Score =  160 bits (404), Expect = 2e-37
 Identities = 85/151 (56%), Positives = 102/151 (67%), Gaps = 10/151 (6%)
 Frame = -3

Query: 424 QVHYLLKDVDLRFIEEFVSRTDSLFLNSFLVTPNCHRITEVTHAFSNGQRLMFDERTRAY 245
           QV YLLKDVD    EEF+   D+ FL  F VTPN HR+TEV HAFS+ ++L FD  TR  
Sbjct: 236 QVSYLLKDVDPSIREEFILSKDAPFLKCFPVTPNNHRVTEVPHAFSHEKKLFFDNWTRHL 295

Query: 244 RKLVDFRGMANELGSRVLECLKLSKLISEKPSTTDSS----------SNVSGLKWMKEVV 95
           +K+VD+RG   EL   V +CLK+SKL  +K S  DS+          SN SGL+W+K+VV
Sbjct: 296 KKMVDYRGRDIELSHLVQDCLKISKLHLDKSSRKDSAEVRQKKNIDISNSSGLRWIKDVV 355

Query: 94  LGKRTDHSFRMVVVGDPKIKLSEIGIPCHIA 2
           LGKR D  FRMVV GDP IKL EIGIPCH+A
Sbjct: 356 LGKRNDDCFRMVVTGDPNIKLKEIGIPCHVA 386


>ref|XP_003611164.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
           gi|355512499|gb|AES94122.1| DNA-directed RNA polymerase
           subunit beta [Medicago truncatula]
          Length = 1687

 Score =  158 bits (399), Expect = 8e-37
 Identities = 86/157 (54%), Positives = 102/157 (64%), Gaps = 16/157 (10%)
 Frame = -3

Query: 424 QVHYLLKDVDLRFIEEFVSRTDSLFLNSFLVTPNCHRITEVTHAFSNGQRLMFDERTRAY 245
           QV  LL  VD  FIE+F+   D + L+ FLV PNCHR+TEV H  S G  L FD RTRA 
Sbjct: 353 QVENLLSGVDPNFIEKFIPSMDLVGLSCFLVAPNCHRVTEVPHRLSGGYPLSFDNRTRAC 412

Query: 244 RKLVDFRGMANELGSRVLECLKLSKLISE--KPSTT--------------DSSSNVSGLK 113
           +KLVDFRG ANEL SRVL+CL+ SK       P  T              +++ N SGL+
Sbjct: 413 KKLVDFRGTANELSSRVLDCLRFSKASFSVINPDRTPVNIFTELQQRKVGENACNSSGLR 472

Query: 112 WMKEVVLGKRTDHSFRMVVVGDPKIKLSEIGIPCHIA 2
           WMK+VVLGKR D +FR VVVGDP ++LSEIGIPC IA
Sbjct: 473 WMKDVVLGKRNDCTFRTVVVGDPDLELSEIGIPCQIA 509