BLASTX nr result
ID: Paeonia23_contig00023190
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia23_contig00023190
(762 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007014350.1| Pentatricopeptide repeat (PPR) superfamily p... 329 7e-88
emb|CBI29825.3| unnamed protein product [Vitis vinifera] 327 4e-87
ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containi... 327 4e-87
ref|XP_002529510.1| pentatricopeptide repeat-containing protein,... 325 8e-87
ref|XP_006492928.1| PREDICTED: pentatricopeptide repeat-containi... 311 2e-82
ref|XP_006421323.1| hypothetical protein CICLE_v10004347mg [Citr... 311 2e-82
ref|XP_006340743.1| PREDICTED: pentatricopeptide repeat-containi... 307 3e-81
ref|XP_004233739.1| PREDICTED: pentatricopeptide repeat-containi... 302 7e-80
ref|XP_006301385.1| hypothetical protein CARUB_v10021797mg [Caps... 292 8e-77
ref|NP_178072.1| pentatricopeptide repeat-containing protein [Ar... 292 8e-77
ref|XP_007213627.1| hypothetical protein PRUPE_ppa002066mg [Prun... 291 2e-76
ref|XP_002889252.1| pentatricopeptide repeat-containing protein ... 290 3e-76
ref|XP_006389878.1| hypothetical protein EUTSA_v10018150mg [Eutr... 284 3e-74
ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containi... 282 8e-74
ref|XP_006848380.1| hypothetical protein AMTR_s00013p00202120 [A... 281 2e-73
ref|XP_002308024.2| pentatricopeptide repeat-containing family p... 280 3e-73
ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containi... 280 4e-73
gb|EXB51207.1| hypothetical protein L484_019198 [Morus notabilis] 274 3e-71
ref|XP_004295543.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 267 3e-69
ref|XP_006845840.1| hypothetical protein AMTR_s00154p00028890 [A... 215 1e-53
>ref|XP_007014350.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
[Theobroma cacao] gi|508784713|gb|EOY31969.1|
Pentatricopeptide repeat (PPR) superfamily protein,
putative [Theobroma cacao]
Length = 800
Score = 329 bits (843), Expect = 7e-88
Identities = 157/253 (62%), Positives = 202/253 (79%), Gaps = 1/253 (0%)
Frame = +2
Query: 2 FYIWAIKQKGLRSSVSQNLVIDLLI-KDDGFDLYWKTLEELKNCKAPIVSDAFLVLIEAY 178
F+IWA+++K LRSS S LV+D+L+ KD+GFD+YW+TLEE+K C A IVSDAF VLI Y
Sbjct: 83 FFIWAMQRKRLRSSASDKLVVDMLLRKDNGFDMYWQTLEEIKKCGALIVSDAFKVLISGY 142
Query: 179 AKSGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMVKSNCRPNQ 358
+K G+ EKAVE FGKM+ F C P+VFTYN+IL++M++++VLLLA+AVYNQM+K+N +PN+
Sbjct: 143 SKLGLDEKAVECFGKMKDFDCKPDVFTYNTILYVMVRRKVLLLALAVYNQMLKNNYKPNR 202
Query: 359 ATYSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNTVILSGLCEARSTDDALRHFYR 538
AT+SILIDG K+G+T+DAL +FD+M RGI PN + T+I+SGLC+A DDA R +
Sbjct: 203 ATFSILIDGLCKNGKTEDALNMFDEMTQRGIEPNRCSYTIIVSGLCQADRADDACRLLNK 262
Query: 539 MKESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKDGFVLDLNGYSCLIDSFFRTKR 718
MKESGC PD + YNALLNGFC+LGRVDEA LL SF+KDGFVL L GYS I+ FR +R
Sbjct: 263 MKESGCSPDFVAYNALLNGFCQLGRVDEAFALLQSFQKDGFVLGLRGYSSFINGLFRARR 322
Query: 719 SDEAHKWYRKMLE 757
+EA+ WY KM E
Sbjct: 323 FEEAYAWYTKMFE 335
Score = 96.7 bits (239), Expect = 8e-18
Identities = 65/274 (23%), Positives = 120/274 (43%), Gaps = 48/274 (17%)
Frame = +2
Query: 80 DDGFDLYWKTLEELKNCKAPIVSDAFLVLIEAYAKSGMAEKAVESFGKMRHFGCSPNVFT 259
++ + Y K EE N K +V + +++ + +G E A++ +M G P+ +
Sbjct: 324 EEAYAWYTKMFEE--NVKPDVV--LYAIMLRGLSVAGKVEDAMKLLSEMTERGLVPDTYC 379
Query: 260 YNSILHLMLQKEVLLLAMAVYNQMVKSNCRPNQATYSILIDGSYKSGRTQDALRLFDDMM 439
YN+++ +L A ++ ++ +C PN TY+ILI G ++G +A ++FD+M
Sbjct: 380 YNAVIKGFCDTGLLDQARSLQLEISSYDCFPNACTYTILISGMCQNGLVGEAQQIFDEME 439
Query: 440 HRGIAPNVITNTVILSGLCEARSTDDALRHFYRMK------------------------- 544
G P+V+T ++ GL +A + A FY+M+
Sbjct: 440 KLGCFPSVVTFNALIDGLSKAGQLEKAHLLFYKMEIGRNPSLFLRLSHGSSGVLDSSSLQ 499
Query: 545 -----------------------ESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKD 655
+ G PD+ TYN L++GFCK G ++ A +L +
Sbjct: 500 TMVEQLYESGRILKAYRILMQLADGGNVPDIFTYNILIHGFCKAGNINGAFKLFKELQLK 559
Query: 656 GFVLDLNGYSCLIDSFFRTKRSDEAHKWYRKMLE 757
G D Y LI+ F R ++A + + +M++
Sbjct: 560 GISPDSVTYGTLINGFQMAGREEDAFRIFDQMVK 593
Score = 95.5 bits (236), Expect = 2e-17
Identities = 56/235 (23%), Positives = 104/235 (44%), Gaps = 35/235 (14%)
Frame = +2
Query: 152 AFLVLIEAYAKSGMAEKAVESFGKMRHFGCSPNVFTYNSILH---------------LML 286
++ +++ ++ A+ A KM+ GCSP+ YN++L+
Sbjct: 239 SYTIIVSGLCQADRADDACRLLNKMKESGCSPDFVAYNALLNGFCQLGRVDEAFALLQSF 298
Query: 287 QKEVLLL--------------------AMAVYNQMVKSNCRPNQATYSILIDGSYKSGRT 406
QK+ +L A A Y +M + N +P+ Y+I++ G +G+
Sbjct: 299 QKDGFVLGLRGYSSFINGLFRARRFEEAYAWYTKMFEENVKPDVVLYAIMLRGLSVAGKV 358
Query: 407 QDALRLFDDMMHRGIAPNVITNTVILSGLCEARSTDDALRHFYRMKESGCCPDLITYNAL 586
+DA++L +M RG+ P+ ++ G C+ D A + C P+ TY L
Sbjct: 359 EDAMKLLSEMTERGLVPDTYCYNAVIKGFCDTGLLDQARSLQLEISSYDCFPNACTYTIL 418
Query: 587 LNGFCKLGRVDEALELLPSFEKDGFVLDLNGYSCLIDSFFRTKRSDEAHKWYRKM 751
++G C+ G V EA ++ EK G + ++ LID + + ++AH + KM
Sbjct: 419 ISGMCQNGLVGEAQQIFDEMEKLGCFPSVVTFNALIDGLSKAGQLEKAHLLFYKM 473
Score = 92.8 bits (229), Expect = 1e-16
Identities = 55/192 (28%), Positives = 93/192 (48%)
Frame = +2
Query: 155 FLVLIEAYAKSGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMV 334
F +LI+ K+G E A+ F +M G PN +Y I+ + Q + A + N+M
Sbjct: 205 FSILIDGLCKNGKTEDALNMFDEMTQRGIEPNRCSYTIIVSGLCQADRADDACRLLNKMK 264
Query: 335 KSNCRPNQATYSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNTVILSGLCEARSTD 514
+S C P+ Y+ L++G + GR +A L G + + ++GL AR +
Sbjct: 265 ESGCSPDFVAYNALLNGFCQLGRVDEAFALLQSFQKDGFVLGLRGYSSFINGLFRARRFE 324
Query: 515 DALRHFYRMKESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKDGFVLDLNGYSCLI 694
+A + +M E PD++ Y +L G G+V++A++LL + G V D Y+ +I
Sbjct: 325 EAYAWYTKMFEENVKPDVVLYAIMLRGLSVAGKVEDAMKLLSEMTERGLVPDTYCYNAVI 384
Query: 695 DSFFRTKRSDEA 730
F T D+A
Sbjct: 385 KGFCDTGLLDQA 396
Score = 80.9 bits (198), Expect = 5e-13
Identities = 43/181 (23%), Positives = 90/181 (49%), Gaps = 13/181 (7%)
Frame = +2
Query: 155 FLVLIEAYAKSGMAEKAVESFGKMRHFGCSPNVFTYNSIL------------HLMLQKEV 298
+ +LI ++G+ +A + F +M GC P+V T+N+++ HL+ K
Sbjct: 415 YTILISGMCQNGLVGEAQQIFDEMEKLGCFPSVVTFNALIDGLSKAGQLEKAHLLFYKME 474
Query: 299 LLLAMAVYNQMVKSNCRP-NQATYSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNT 475
+ +++ ++ + + ++ +++ Y+SGR A R+ + G P++ T
Sbjct: 475 IGRNPSLFLRLSHGSSGVLDSSSLQTMVEQLYESGRILKAYRILMQLADGGNVPDIFTYN 534
Query: 476 VILSGLCEARSTDDALRHFYRMKESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKD 655
+++ G C+A + + A + F ++ G PD +TY L+NGF GR ++A + K+
Sbjct: 535 ILIHGFCKAGNINGAFKLFKELQLKGISPDSVTYGTLINGFQMAGREEDAFRIFDQMVKN 594
Query: 656 G 658
G
Sbjct: 595 G 595
Score = 75.5 bits (184), Expect = 2e-11
Identities = 49/174 (28%), Positives = 86/174 (49%), Gaps = 14/174 (8%)
Frame = +2
Query: 155 FLVLIEAYAKSGMAEKAVESFGKMRHFGCSPNVF--------------TYNSILHLMLQK 292
F LI+ +K+G EKA F KM G +P++F + +++ + +
Sbjct: 450 FNALIDGLSKAGQLEKAHLLFYKME-IGRNPSLFLRLSHGSSGVLDSSSLQTMVEQLYES 508
Query: 293 EVLLLAMAVYNQMVKSNCRPNQATYSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITN 472
+L A + Q+ P+ TY+ILI G K+G A +LF ++ +GI+P+ +T
Sbjct: 509 GRILKAYRILMQLADGGNVPDIFTYNILIHGFCKAGNINGAFKLFKELQLKGISPDSVTY 568
Query: 473 TVILSGLCEARSTDDALRHFYRMKESGCCPDLITYNALLNGFCKLGRVDEALEL 634
+++G A +DA R F +M ++GC P + Y +L+ C+ +V A L
Sbjct: 569 GTLINGFQMAGREEDAFRIFDQMVKNGCKPSVAVYRSLMTWSCRRRKVSLAFNL 622
Score = 67.4 bits (163), Expect = 5e-09
Identities = 48/203 (23%), Positives = 82/203 (40%), Gaps = 34/203 (16%)
Frame = +2
Query: 146 SDAFLVLIEAYAKSGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYN 325
S + ++E +SG KA ++ G P++FTYN ++H + + A ++
Sbjct: 495 SSSLQTMVEQLYESGRILKAYRILMQLADGGNVPDIFTYNILIHGFCKAGNINGAFKLFK 554
Query: 326 QMVKSNCRPNQATYSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNTVILSGLCEAR 505
++ P+ TY LI+G +GR +DA R+FD M+ G P+V +++ C R
Sbjct: 555 ELQLKGISPDSVTYGTLINGFQMAGREEDAFRIFDQMVKNGCKPSVAVYRSLMTWSCRRR 614
Query: 506 ----------------------------------STDDALRHFYRMKESGCCPDLITYNA 583
+ A+R RM + Y
Sbjct: 615 KVSLAFNLWLMYLRSLPGRQDTVIKEVEKYFDEGQVEKAVRGLLRMDFKLNSFSVAPYTI 674
Query: 584 LLNGFCKLGRVDEALELLPSFEK 652
L G C+ GRV+EAL++ E+
Sbjct: 675 WLIGLCQAGRVEEALKIFYILEE 697
Score = 62.4 bits (150), Expect = 2e-07
Identities = 57/224 (25%), Positives = 105/224 (46%), Gaps = 3/224 (1%)
Frame = +2
Query: 53 NLVIDLLIKDDGFDLYWKTLEELKNCKAPIVSDAFLVLIEAYAKSGMAEKAVESFGKMRH 232
N++I K + +K +EL+ S + LI + +G E A F +M
Sbjct: 534 NILIHGFCKAGNINGAFKLFKELQLKGISPDSVTYGTLINGFQMAGREEDAFRIFDQMVK 593
Query: 233 FGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMVKSNCRPNQATYSILIDGSYKSGRTQD 412
GC P+V Y S++ ++ + LA ++ ++S Q T ++ + G+ +
Sbjct: 594 NGCKPSVAVYRSLMTWSCRRRKVSLAFNLWLMYLRS-LPGRQDTVIKEVEKYFDEGQVEK 652
Query: 413 ALRLFDDMMHRGIAPNVITNTVILSGLCEARSTDDALRHFYRMKESGCCPDLITYNA--- 583
A+R M + + +V T+ L GLC+A ++AL+ FY ++E C ++T +
Sbjct: 653 AVRGLLRMDFKLNSFSVAPYTIWLIGLCQAGRVEEALKIFYILEE---CKVVVTPPSCVR 709
Query: 584 LLNGFCKLGRVDEALELLPSFEKDGFVLDLNGYSCLIDSFFRTK 715
L+ G CK G +D A+++ + GF L + L+ S R+K
Sbjct: 710 LIVGLCKEGNLDLAVDVFLYTLEQGFKLMPRICNYLLKSLLRSK 753
>emb|CBI29825.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 327 bits (837), Expect = 4e-87
Identities = 158/252 (62%), Positives = 192/252 (76%)
Frame = +2
Query: 2 FYIWAIKQKGLRSSVSQNLVIDLLIKDDGFDLYWKTLEELKNCKAPIVSDAFLVLIEAYA 181
F+IW +++ RS V+ NLVID+L KDDGFD YWK LEELKN I F VLI AYA
Sbjct: 83 FFIWTTRRRSFRSWVTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYA 142
Query: 182 KSGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMVKSNCRPNQA 361
KSGMAEKAVESFGKM+ FGC P+VFTYNSILH+M+QKEV LLA+AVYNQM+K N PN+A
Sbjct: 143 KSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRA 202
Query: 362 TYSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNTVILSGLCEARSTDDALRHFYRM 541
T+ IL++G K+G+T DAL++FD+M +GI PN + T+ILSGLC+A+ TDD R M
Sbjct: 203 TFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTM 262
Query: 542 KESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKDGFVLDLNGYSCLIDSFFRTKRS 721
K SGCCPD IT NALL+GFCKLG++DEA LL FEK+G+VL + GYS LID FR KR
Sbjct: 263 KVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRY 322
Query: 722 DEAHKWYRKMLE 757
DE +W RKM +
Sbjct: 323 DEVQEWCRKMFK 334
Score = 91.3 bits (225), Expect = 3e-16
Identities = 71/281 (25%), Positives = 116/281 (41%), Gaps = 36/281 (12%)
Frame = +2
Query: 17 IKQKGLRSSV-SQNLVIDLLIKDDGFDLYWKTLEELKNCKAPIVSDAFLVLIEAYAKSGM 193
+K G + V + N ++ ++++ + F L ++ F++L+ K+G
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGK 216
Query: 194 AEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMVKSNCRPNQATYSI 373
+ A++ F +M G PN Y IL + Q + + N M S C P+ T +
Sbjct: 217 TDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNA 276
Query: 374 LIDGSYKSGRTQDA---LRLFDD--------------------------------MMHRG 448
L+DG K G+ +A L+LF+ M G
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAG 336
Query: 449 IAPNVITNTVILSGLCEARSTDDALRHFYRMKESGCCPDLITYNALLNGFCKLGRVDEAL 628
I P+V+ T+++ G CE D AL M + G PD YNAL+ GFC +G +D+A
Sbjct: 337 IEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKAR 396
Query: 629 ELLPSFEKDGFVLDLNGYSCLIDSFFRTKRSDEAHKWYRKM 751
L K+ Y+ LI R DEA + + +M
Sbjct: 397 SLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQM 437
Score = 90.9 bits (224), Expect = 4e-16
Identities = 62/221 (28%), Positives = 107/221 (48%), Gaps = 10/221 (4%)
Frame = +2
Query: 122 KNCKAPIVSDAFL--VLIEAYAKSGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKE 295
K KA I D L +LI + + GM + A+ M G SP+ + YN+++
Sbjct: 331 KMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVG 390
Query: 296 VLLLAMAVYNQMVKSNCRPNQATYSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNT 475
+L A ++ ++ K++C P TY+ILI G ++G +A ++F+ M + G +P+++T
Sbjct: 391 LLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFN 450
Query: 476 VILSGLCEARSTDDALRHFYRMKESGCCPDLITYNA--------LLNGFCKLGRVDEALE 631
++ GLC+A ++A FY+M E G P L + NGF ++ R ++A
Sbjct: 451 ALIDGLCKAGELEEARHLFYKM-EIGKNPSLFLRLSQGADRVMDTANGFHRVDREEDAFR 509
Query: 632 LLPSFEKDGFVLDLNGYSCLIDSFFRTKRSDEAHKWYRKML 754
+L K+G Y CL+ R + A + K L
Sbjct: 510 VLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYL 550
Score = 75.9 bits (185), Expect = 1e-11
Identities = 50/203 (24%), Positives = 92/203 (45%)
Frame = +2
Query: 41 SVSQNLVIDLLIKDDGFDLYWKTLEELKNCKAPIVSDAFLVLIEAYAKSGMAEKAVESFG 220
S++ N ++D K D + L+ + + + LI+ ++ ++ E
Sbjct: 271 SITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCR 330
Query: 221 KMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMVKSNCRPNQATYSILIDGSYKSG 400
KM G P+V Y ++ + ++ A+ + N M + P+ Y+ LI G G
Sbjct: 331 KMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVG 390
Query: 401 RTQDALRLFDDMMHRGIAPNVITNTVILSGLCEARSTDDALRHFYRMKESGCCPDLITYN 580
A L ++ P T T+++ G+C D+A + F +M+ GC P ++T+N
Sbjct: 391 LLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFN 450
Query: 581 ALLNGFCKLGRVDEALELLPSFE 649
AL++G CK G ++EA L E
Sbjct: 451 ALIDGLCKAGELEEARHLFYKME 473
>ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Vitis vinifera]
Length = 798
Score = 327 bits (837), Expect = 4e-87
Identities = 158/252 (62%), Positives = 192/252 (76%)
Frame = +2
Query: 2 FYIWAIKQKGLRSSVSQNLVIDLLIKDDGFDLYWKTLEELKNCKAPIVSDAFLVLIEAYA 181
F+IW +++ RS V+ NLVID+L KDDGFD YWK LEELKN I F VLI AYA
Sbjct: 83 FFIWTTRRRSFRSWVTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYA 142
Query: 182 KSGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMVKSNCRPNQA 361
KSGMAEKAVESFGKM+ FGC P+VFTYNSILH+M+QKEV LLA+AVYNQM+K N PN+A
Sbjct: 143 KSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRA 202
Query: 362 TYSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNTVILSGLCEARSTDDALRHFYRM 541
T+ IL++G K+G+T DAL++FD+M +GI PN + T+ILSGLC+A+ TDD R M
Sbjct: 203 TFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTM 262
Query: 542 KESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKDGFVLDLNGYSCLIDSFFRTKRS 721
K SGCCPD IT NALL+GFCKLG++DEA LL FEK+G+VL + GYS LID FR KR
Sbjct: 263 KVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRY 322
Query: 722 DEAHKWYRKMLE 757
DE +W RKM +
Sbjct: 323 DEVQEWCRKMFK 334
Score = 108 bits (269), Expect = 3e-21
Identities = 69/262 (26%), Positives = 119/262 (45%), Gaps = 50/262 (19%)
Frame = +2
Query: 122 KNCKAPIVSDAFL--VLIEAYAKSGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKE 295
K KA I D L +LI + + GM + A+ M G SP+ + YN+++
Sbjct: 331 KMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVG 390
Query: 296 VLLLAMAVYNQMVKSNCRPNQATYSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNT 475
+L A ++ ++ K++C P TY+ILI G ++G +A ++F+ M + G +P+++T
Sbjct: 391 LLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFN 450
Query: 476 VILSGLCEARSTDDALRHFYRMK------------------------------------- 544
++ GLC+A ++A FY+M+
Sbjct: 451 ALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLI 510
Query: 545 -----------ESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKDGFVLDLNGYSCL 691
+SG PD++TYN L+NGFCK ++ A +L + G D Y L
Sbjct: 511 LKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTL 570
Query: 692 IDSFFRTKRSDEAHKWYRKMLE 757
ID F R R ++A + +M++
Sbjct: 571 IDGFHRVDREEDAFRVLDQMVK 592
Score = 91.3 bits (225), Expect = 3e-16
Identities = 71/281 (25%), Positives = 116/281 (41%), Gaps = 36/281 (12%)
Frame = +2
Query: 17 IKQKGLRSSV-SQNLVIDLLIKDDGFDLYWKTLEELKNCKAPIVSDAFLVLIEAYAKSGM 193
+K G + V + N ++ ++++ + F L ++ F++L+ K+G
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGK 216
Query: 194 AEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMVKSNCRPNQATYSI 373
+ A++ F +M G PN Y IL + Q + + N M S C P+ T +
Sbjct: 217 TDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNA 276
Query: 374 LIDGSYKSGRTQDA---LRLFDD--------------------------------MMHRG 448
L+DG K G+ +A L+LF+ M G
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAG 336
Query: 449 IAPNVITNTVILSGLCEARSTDDALRHFYRMKESGCCPDLITYNALLNGFCKLGRVDEAL 628
I P+V+ T+++ G CE D AL M + G PD YNAL+ GFC +G +D+A
Sbjct: 337 IEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKAR 396
Query: 629 ELLPSFEKDGFVLDLNGYSCLIDSFFRTKRSDEAHKWYRKM 751
L K+ Y+ LI R DEA + + +M
Sbjct: 397 SLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQM 437
Score = 86.3 bits (212), Expect = 1e-14
Identities = 55/228 (24%), Positives = 109/228 (47%), Gaps = 13/228 (5%)
Frame = +2
Query: 110 LEELKNCKAPIVSDAFLVLIEAYAKSGMAEKAVESFGKMRHFGCSPNVFTYNSIL----- 274
LE KN P S + +LI ++G+ ++A + F +M + GCSP++ T+N+++
Sbjct: 400 LEISKNDCFP-TSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCK 458
Query: 275 --------HLMLQKEVLLLAMAVYNQMVKSNCRPNQATYSILIDGSYKSGRTQDALRLFD 430
HL + E+ ++ + A+ +++ +SG A +L
Sbjct: 459 AGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLM 518
Query: 431 DMMHRGIAPNVITNTVILSGLCEARSTDDALRHFYRMKESGCCPDLITYNALLNGFCKLG 610
+ G+ P+++T V+++G C+A++ + A + F ++ G PD +TY L++GF ++
Sbjct: 519 QLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVD 578
Query: 611 RVDEALELLPSFEKDGFVLDLNGYSCLIDSFFRTKRSDEAHKWYRKML 754
R ++A +L K+G Y CL+ R + A + K L
Sbjct: 579 REEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYL 626
Score = 75.9 bits (185), Expect = 1e-11
Identities = 50/203 (24%), Positives = 92/203 (45%)
Frame = +2
Query: 41 SVSQNLVIDLLIKDDGFDLYWKTLEELKNCKAPIVSDAFLVLIEAYAKSGMAEKAVESFG 220
S++ N ++D K D + L+ + + + LI+ ++ ++ E
Sbjct: 271 SITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCR 330
Query: 221 KMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMVKSNCRPNQATYSILIDGSYKSG 400
KM G P+V Y ++ + ++ A+ + N M + P+ Y+ LI G G
Sbjct: 331 KMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVG 390
Query: 401 RTQDALRLFDDMMHRGIAPNVITNTVILSGLCEARSTDDALRHFYRMKESGCCPDLITYN 580
A L ++ P T T+++ G+C D+A + F +M+ GC P ++T+N
Sbjct: 391 LLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFN 450
Query: 581 ALLNGFCKLGRVDEALELLPSFE 649
AL++G CK G ++EA L E
Sbjct: 451 ALIDGLCKAGELEEARHLFYKME 473
Score = 60.8 bits (146), Expect = 5e-07
Identities = 49/203 (24%), Positives = 90/203 (44%), Gaps = 34/203 (16%)
Frame = +2
Query: 161 VLIEAYAKSGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMVKS 340
VLI + K+ A + F +++ G SP+ TY +++ + + A V +QMVK+
Sbjct: 534 VLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKN 593
Query: 341 NCRPNQATYSILIDGSYKSGRTQ------------------DALRLFDDMMHRGIAPNVI 466
C P+ A Y L+ S + G+ + L+L ++ +G +
Sbjct: 594 GCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKAV 653
Query: 467 T----------------NTVILSGLCEARSTDDALRHFYRMKESGCCPDLITYNALLNGF 598
T+ L GLC+AR +++AL+ F +KE + + L+NG
Sbjct: 654 RCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGL 713
Query: 599 CKLGRVDEALELLPSFEKDGFVL 667
CK G ++ A+++ + GF+L
Sbjct: 714 CKDGNLEMAVDIFLYTLEKGFML 736
>ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223531026|gb|EEF32879.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 804
Score = 325 bits (834), Expect = 8e-87
Identities = 156/252 (61%), Positives = 197/252 (78%)
Frame = +2
Query: 2 FYIWAIKQKGLRSSVSQNLVIDLLIKDDGFDLYWKTLEELKNCKAPIVSDAFLVLIEAYA 181
F+IWA K + LRS VS N++ID+LIKD+GF+LYW+ L+E+K C I +DAF VLI+AYA
Sbjct: 78 FFIWASKFRRLRSWVSHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYA 137
Query: 182 KSGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMVKSNCRPNQA 361
K M EKAVESF M+ F C P+VFTYN++LH+M++KEV+LLA+ +YN+M+K NC PN A
Sbjct: 138 KMDMIEKAVESFEMMKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIA 197
Query: 362 TYSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNTVILSGLCEARSTDDALRHFYRM 541
T+SILIDG KSG+TQ+AL++FD+M R I PN IT T+I+SGLC+A+ D A R F M
Sbjct: 198 TFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAM 257
Query: 542 KESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKDGFVLDLNGYSCLIDSFFRTKRS 721
K+ GC PD +TYNALL+GFCKLGRVDEAL LL FEKD +VLD GYSCLID FR +R
Sbjct: 258 KDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRF 317
Query: 722 DEAHKWYRKMLE 757
++A WYRKM E
Sbjct: 318 EDAQVWYRKMTE 329
Score = 91.7 bits (226), Expect = 3e-16
Identities = 57/240 (23%), Positives = 107/240 (44%), Gaps = 48/240 (20%)
Frame = +2
Query: 155 FLVLIEAYAKSGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMV 334
+ ++++ +K+G + A+ +M G P+ YN+++ +L A +++ ++
Sbjct: 339 YTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEIS 398
Query: 335 KSNCRPNQATYSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNTVILSGLCEARSTD 514
K++C + TY+ILI G +SG DA ++F++M G P+V+T ++ G C+A + +
Sbjct: 399 KNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIE 458
Query: 515 DALRHFYRMK------------------------------------------------ES 550
A FY+M+ +S
Sbjct: 459 KAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDS 518
Query: 551 GCCPDLITYNALLNGFCKLGRVDEALELLPSFEKDGFVLDLNGYSCLIDSFFRTKRSDEA 730
G P++ITYN L++GFCK G ++ A +L + G D Y LI+ R ++A
Sbjct: 519 GFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREEDA 578
Score = 91.3 bits (225), Expect = 3e-16
Identities = 57/234 (24%), Positives = 103/234 (44%), Gaps = 35/234 (14%)
Frame = +2
Query: 155 FLVLIEAYAKSGMAEKAVESFGKMRHFGCSPNVFTYNSILH---------------LMLQ 289
+ ++I ++ A+ A F M+ GC P+ TYN++LH +
Sbjct: 234 YTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFE 293
Query: 290 KEVLLL--------------------AMAVYNQMVKSNCRPNQATYSILIDGSYKSGRTQ 409
K+ +L A Y +M + N +P+ Y+I++ G K+G+ +
Sbjct: 294 KDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFK 353
Query: 410 DALRLFDDMMHRGIAPNVITNTVILSGLCEARSTDDALRHFYRMKESGCCPDLITYNALL 589
DALRL ++M RG+ P+ ++ G C+ D+A + ++ C TY L+
Sbjct: 354 DALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILI 413
Query: 590 NGFCKLGRVDEALELLPSFEKDGFVLDLNGYSCLIDSFFRTKRSDEAHKWYRKM 751
G C+ G V +A ++ EK G + ++ LID F + ++A + KM
Sbjct: 414 CGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKM 467
Score = 75.9 bits (185), Expect = 1e-11
Identities = 49/187 (26%), Positives = 89/187 (47%), Gaps = 14/187 (7%)
Frame = +2
Query: 116 ELKNCKAPIVSDAFLVLIEAYAKSGMAEKAVESFGKMRHFGCSPNVF------------- 256
E C +V+ F LI+ + K+G EKA F KM G +P++F
Sbjct: 433 EKHGCYPSVVT--FNALIDGFCKAGNIEKAQLLFYKME-IGRNPSLFLRLSQGANRVLDT 489
Query: 257 -TYNSILHLMLQKEVLLLAMAVYNQMVKSNCRPNQATYSILIDGSYKSGRTQDALRLFDD 433
+ +++ + ++L A + Q+ S PN TY+ILI G K+G A +LF +
Sbjct: 490 ASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKE 549
Query: 434 MMHRGIAPNVITNTVILSGLCEARSTDDALRHFYRMKESGCCPDLITYNALLNGFCKLGR 613
+ +G++P+ +T +++GL A +DA ++ ++GC P Y + + C+ +
Sbjct: 550 LQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNK 609
Query: 614 VDEALEL 634
+ A L
Sbjct: 610 ITLAFSL 616
Score = 74.7 bits (182), Expect = 3e-11
Identities = 44/181 (24%), Positives = 84/181 (46%), Gaps = 13/181 (7%)
Frame = +2
Query: 155 FLVLIEAYAKSGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMV 334
+ +LI +SG+ A + F +M GC P+V T+N+++ + + A ++ +M
Sbjct: 409 YTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKME 468
Query: 335 -------------KSNCRPNQATYSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNT 475
+N + A+ +++ SG A + + G APN+IT
Sbjct: 469 IGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYN 528
Query: 476 VILSGLCEARSTDDALRHFYRMKESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKD 655
+++ G C+A + + A + F ++ G PD +TY L+NG R ++A +L K+
Sbjct: 529 ILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKN 588
Query: 656 G 658
G
Sbjct: 589 G 589
>ref|XP_006492928.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Citrus sinensis]
Length = 869
Score = 311 bits (796), Expect = 2e-82
Identities = 147/252 (58%), Positives = 188/252 (74%)
Frame = +2
Query: 2 FYIWAIKQKGLRSSVSQNLVIDLLIKDDGFDLYWKTLEELKNCKAPIVSDAFLVLIEAYA 181
F+IWA K+K LRS S + VI +L+K +GFDLYW+TL+ELK+ +VSD F VLI Y
Sbjct: 152 FFIWAAKRKRLRSFASNSAVIRMLLKPNGFDLYWQTLDELKSGNVSVVSDVFFVLISGYY 211
Query: 182 KSGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMVKSNCRPNQA 361
K G EKA+ESFGKM+ F C P+V+ YN++L+++ +K++ LLA+AVY +MVK NC PN
Sbjct: 212 KVGDCEKALESFGKMKEFDCQPDVYMYNAVLNIVFRKQLFLLALAVYYEMVKLNCLPNIV 271
Query: 362 TYSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNTVILSGLCEARSTDDALRHFYRM 541
T+S+LIDG KSG+T+ A+++FD+M RGI PN T T+++SGLC+ D+A R F +M
Sbjct: 272 TFSLLIDGLSKSGKTEVAIKMFDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 331
Query: 542 KESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKDGFVLDLNGYSCLIDSFFRTKRS 721
K+SGC PD + YNALLNGFCKL VDEAL LL SFEKDGFV L YSCLID FR KR
Sbjct: 332 KDSGCSPDFVAYNALLNGFCKLRGVDEALALLRSFEKDGFVPGLGSYSCLIDGLFRAKRY 391
Query: 722 DEAHKWYRKMLE 757
DEA+ WYRKM E
Sbjct: 392 DEAYAWYRKMFE 403
Score = 113 bits (282), Expect = 8e-23
Identities = 73/249 (29%), Positives = 120/249 (48%)
Frame = +2
Query: 5 YIWAIKQKGLRSSVSQNLVIDLLIKDDGFDLYWKTLEELKNCKAPIVSDAFLVLIEAYAK 184
Y +K L + V+ +L+ID L K ++ K +E+ + ++I +
Sbjct: 258 YYEMVKLNCLPNIVTFSLLIDGLSKSGKTEVAIKMFDEMTQRGILPNKFTYTIVISGLCQ 317
Query: 185 SGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMVKSNCRPNQAT 364
A++A F KM+ GCSP+ YN++L+ + + A+A+ K P +
Sbjct: 318 INRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRGVDEALALLRSFEKDGFVPGLGS 377
Query: 365 YSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNTVILSGLCEARSTDDALRHFYRMK 544
YS LIDG +++ R +A + M I P+V+ VI+ GL EA DA++ M
Sbjct: 378 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVIIRGLSEAGKVKDAMKLLSDMS 437
Query: 545 ESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKDGFVLDLNGYSCLIDSFFRTKRSD 724
+ G PD+ YNAL+ GFC LG +D+A L K + + + ++ LI R D
Sbjct: 438 DRGIVPDIYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 497
Query: 725 EAHKWYRKM 751
+A K + KM
Sbjct: 498 DAQKLFNKM 506
Score = 100 bits (249), Expect = 6e-19
Identities = 77/289 (26%), Positives = 127/289 (43%), Gaps = 54/289 (18%)
Frame = +2
Query: 47 SQNLVIDLLIK----DDGFDLYWKTLEELKNCKAPIVSDAFL--VLIEAYAKSGMAEKAV 208
S + +ID L + D+ + Y K EE I D L V+I +++G + A+
Sbjct: 377 SYSCLIDGLFRAKRYDEAYAWYRKMFEE------KIEPDVVLYGVIIRGLSEAGKVKDAM 430
Query: 209 ESFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMVKSNCRPNQATYSILIDGS 388
+ M G P+++ YN+++ +L A ++ ++ K + PN T++ILI G
Sbjct: 431 KLLSDMSDRGIVPDIYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 490
Query: 389 YKSGRTQDALRLFDDMMHRGIAPNVITNTVILSGLCEARSTDDALRHFYRMK-------- 544
++G DA +LF+ M G P+V T ++ GLC+A + A FY+M+
Sbjct: 491 CRNGMVDDAQKLFNKMEKAGCFPSVGTFNALIDGLCKAGELEKANLLFYKMEIGKNPMLF 550
Query: 545 ----------------------------------------ESGCCPDLITYNALLNGFCK 604
ESG PD+ITYN L+NGFCK
Sbjct: 551 LRLSQGGNRVHDKASLQTMVEQYCTSGLIHKAYKILMQLAESGNLPDIITYNILINGFCK 610
Query: 605 LGRVDEALELLPSFEKDGFVLDLNGYSCLIDSFFRTKRSDEAHKWYRKM 751
+G ++ AL+L + G D Y LI+ R R ++A + + +M
Sbjct: 611 VGNINGALKLFKELQLKGLSPDSVTYGTLINGLQRVDREEDAFRIFEQM 659
Score = 79.0 bits (193), Expect = 2e-12
Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 48/215 (22%)
Frame = +2
Query: 155 FLVLIEAYAKSGMAEKAVESFGKMRHFGCSPNVFTYNSILHLM-----LQKEVLLL---- 307
F +LI ++GM + A + F KM GC P+V T+N+++ + L+K LL
Sbjct: 483 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGTFNALIDGLCKAGELEKANLLFYKME 542
Query: 308 ---------------------------------------AMAVYNQMVKSNCRPNQATYS 370
A + Q+ +S P+ TY+
Sbjct: 543 IGKNPMLFLRLSQGGNRVHDKASLQTMVEQYCTSGLIHKAYKILMQLAESGNLPDIITYN 602
Query: 371 ILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNTVILSGLCEARSTDDALRHFYRMKES 550
ILI+G K G AL+LF ++ +G++P+ +T +++GL +DA R F +M ++
Sbjct: 603 ILINGFCKVGNINGALKLFKELQLKGLSPDSVTYGTLINGLQRVDREEDAFRIFEQMPQN 662
Query: 551 GCCPDLITYNALLNGFCKLGRVDEALELLPSFEKD 655
GC P Y +L+ C+ ++ A L + +D
Sbjct: 663 GCTPSPAVYKSLMTWSCRRRKISLAFSLWLQYLRD 697
Score = 61.6 bits (148), Expect = 3e-07
Identities = 50/231 (21%), Positives = 102/231 (44%), Gaps = 37/231 (16%)
Frame = +2
Query: 161 VLIEAYAKSGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMVKS 340
+LI + K G A++ F +++ G SP+ TY ++++ + + + A ++ QM ++
Sbjct: 603 ILINGFCKVGNINGALKLFKELQLKGLSPDSVTYGTLINGLQRVDREEDAFRIFEQMPQN 662
Query: 341 NCRPNQATYSILIDGSYK------------------SGRTQDALRLFDDMMHRGIAPNVI 466
C P+ A Y L+ S + SGR ++++ ++ + +G N I
Sbjct: 663 GCTPSPAVYKSLMTWSCRRRKISLAFSLWLQYLRDISGRDDESMKSIEEFLQKGKVENAI 722
Query: 467 TN----------------TVILSGLCEARSTDDALRHFYRMKESGCCPDLITYNA---LL 589
T+ L GLC+ +A F + E C ++T + L+
Sbjct: 723 QGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEAFNIFSILVE---CKAIVTPPSCVKLI 779
Query: 590 NGFCKLGRVDEALELLPSFEKDGFVLDLNGYSCLIDSFFRTKRSDEAHKWY 742
+G CK G +D A+++ K+ F+L + L+ S +K + + H ++
Sbjct: 780 HGLCKRGYLDLAMDVFLYTLKNDFILRPRVCNYLLRSLLLSKDNKKVHAYH 830
>ref|XP_006421323.1| hypothetical protein CICLE_v10004347mg [Citrus clementina]
gi|557523196|gb|ESR34563.1| hypothetical protein
CICLE_v10004347mg [Citrus clementina]
Length = 801
Score = 311 bits (796), Expect = 2e-82
Identities = 147/252 (58%), Positives = 188/252 (74%)
Frame = +2
Query: 2 FYIWAIKQKGLRSSVSQNLVIDLLIKDDGFDLYWKTLEELKNCKAPIVSDAFLVLIEAYA 181
F+IWA K+K LRS S + VI +L+K +GFDLYW+TL+ELK+ +VSD F VLI Y
Sbjct: 84 FFIWAAKRKRLRSFASNSAVIRMLLKPNGFDLYWQTLDELKSGNVSVVSDVFFVLISGYY 143
Query: 182 KSGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMVKSNCRPNQA 361
K G EKA+ESFGKM+ F C P+V+ YN++L+++ +K++ LLA+AVY +MVK NC PN
Sbjct: 144 KVGDCEKALESFGKMKEFDCQPDVYMYNAVLNIVFRKQLFLLALAVYYEMVKLNCLPNIV 203
Query: 362 TYSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNTVILSGLCEARSTDDALRHFYRM 541
T+S+LIDG KSG+T+ A+++FD+M RGI PN T T+++SGLC+ D+A R F +M
Sbjct: 204 TFSLLIDGLSKSGKTEVAIKMFDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 263
Query: 542 KESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKDGFVLDLNGYSCLIDSFFRTKRS 721
K+SGC PD + YNALLNGFCKL VDEAL LL SFEKDGFV L YSCLID FR KR
Sbjct: 264 KDSGCSPDFVAYNALLNGFCKLRGVDEALALLRSFEKDGFVPGLGSYSCLIDGLFRAKRY 323
Query: 722 DEAHKWYRKMLE 757
DEA+ WYRKM E
Sbjct: 324 DEAYAWYRKMFE 335
Score = 113 bits (282), Expect = 8e-23
Identities = 73/249 (29%), Positives = 120/249 (48%)
Frame = +2
Query: 5 YIWAIKQKGLRSSVSQNLVIDLLIKDDGFDLYWKTLEELKNCKAPIVSDAFLVLIEAYAK 184
Y +K L + V+ +L+ID L K ++ K +E+ + ++I +
Sbjct: 190 YYEMVKLNCLPNIVTFSLLIDGLSKSGKTEVAIKMFDEMTQRGILPNKFTYTIVISGLCQ 249
Query: 185 SGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMVKSNCRPNQAT 364
A++A F KM+ GCSP+ YN++L+ + + A+A+ K P +
Sbjct: 250 INRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRGVDEALALLRSFEKDGFVPGLGS 309
Query: 365 YSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNTVILSGLCEARSTDDALRHFYRMK 544
YS LIDG +++ R +A + M I P+V+ VI+ GL EA DA++ M
Sbjct: 310 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVIIRGLSEAGKVKDAMKLLSDMS 369
Query: 545 ESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKDGFVLDLNGYSCLIDSFFRTKRSD 724
+ G PD+ YNAL+ GFC LG +D+A L K + + + ++ LI R D
Sbjct: 370 DRGIVPDIYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 429
Query: 725 EAHKWYRKM 751
+A K + KM
Sbjct: 430 DAQKLFNKM 438
Score = 100 bits (249), Expect = 6e-19
Identities = 77/289 (26%), Positives = 127/289 (43%), Gaps = 54/289 (18%)
Frame = +2
Query: 47 SQNLVIDLLIK----DDGFDLYWKTLEELKNCKAPIVSDAFL--VLIEAYAKSGMAEKAV 208
S + +ID L + D+ + Y K EE I D L V+I +++G + A+
Sbjct: 309 SYSCLIDGLFRAKRYDEAYAWYRKMFEE------KIEPDVVLYGVIIRGLSEAGKVKDAM 362
Query: 209 ESFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMVKSNCRPNQATYSILIDGS 388
+ M G P+++ YN+++ +L A ++ ++ K + PN T++ILI G
Sbjct: 363 KLLSDMSDRGIVPDIYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 422
Query: 389 YKSGRTQDALRLFDDMMHRGIAPNVITNTVILSGLCEARSTDDALRHFYRMK-------- 544
++G DA +LF+ M G P+V T ++ GLC+A + A FY+M+
Sbjct: 423 CRNGMVDDAQKLFNKMEKAGCFPSVGTFNALIDGLCKAGELEKANLLFYKMEIGKNPTLF 482
Query: 545 ----------------------------------------ESGCCPDLITYNALLNGFCK 604
ESG PD+ITYN L+NGFCK
Sbjct: 483 LRLSQGGNRVHDKASLQTMVEQYCTSGLIHKAYKILMQLAESGNLPDIITYNILINGFCK 542
Query: 605 LGRVDEALELLPSFEKDGFVLDLNGYSCLIDSFFRTKRSDEAHKWYRKM 751
+G ++ AL+L + G D Y LI+ R R ++A + + +M
Sbjct: 543 VGNINGALKLFKELQLKGLSPDSVTYGTLINGLQRVDREEDAFRIFEQM 591
Score = 79.0 bits (193), Expect = 2e-12
Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 48/215 (22%)
Frame = +2
Query: 155 FLVLIEAYAKSGMAEKAVESFGKMRHFGCSPNVFTYNSILHLM-----LQKEVLLL---- 307
F +LI ++GM + A + F KM GC P+V T+N+++ + L+K LL
Sbjct: 415 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGTFNALIDGLCKAGELEKANLLFYKME 474
Query: 308 ---------------------------------------AMAVYNQMVKSNCRPNQATYS 370
A + Q+ +S P+ TY+
Sbjct: 475 IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTSGLIHKAYKILMQLAESGNLPDIITYN 534
Query: 371 ILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNTVILSGLCEARSTDDALRHFYRMKES 550
ILI+G K G AL+LF ++ +G++P+ +T +++GL +DA R F +M ++
Sbjct: 535 ILINGFCKVGNINGALKLFKELQLKGLSPDSVTYGTLINGLQRVDREEDAFRIFEQMPQN 594
Query: 551 GCCPDLITYNALLNGFCKLGRVDEALELLPSFEKD 655
GC P Y +L+ C+ ++ A L + +D
Sbjct: 595 GCTPSPAVYKSLMTWSCRRRKISLAFSLWLQYLRD 629
Score = 61.6 bits (148), Expect = 3e-07
Identities = 50/231 (21%), Positives = 102/231 (44%), Gaps = 37/231 (16%)
Frame = +2
Query: 161 VLIEAYAKSGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMVKS 340
+LI + K G A++ F +++ G SP+ TY ++++ + + + A ++ QM ++
Sbjct: 535 ILINGFCKVGNINGALKLFKELQLKGLSPDSVTYGTLINGLQRVDREEDAFRIFEQMPQN 594
Query: 341 NCRPNQATYSILIDGSYK------------------SGRTQDALRLFDDMMHRGIAPNVI 466
C P+ A Y L+ S + SGR ++++ ++ + +G N I
Sbjct: 595 GCTPSPAVYKSLMTWSCRRRKISLAFSLWLQYLRDISGRDDESMKSIEEFLQKGKVENAI 654
Query: 467 TN----------------TVILSGLCEARSTDDALRHFYRMKESGCCPDLITYNA---LL 589
T+ L GLC+ +A F + E C ++T + L+
Sbjct: 655 QGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEAFNIFSILVE---CKAIVTPPSCVKLI 711
Query: 590 NGFCKLGRVDEALELLPSFEKDGFVLDLNGYSCLIDSFFRTKRSDEAHKWY 742
+G CK G +D A+++ K+ F+L + L+ S +K + + H ++
Sbjct: 712 HGLCKRGYLDLAMDVFLYTLKNDFILRPRVCNYLLRSLLLSKDNKKVHAYH 762
>ref|XP_006340743.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Solanum tuberosum]
Length = 775
Score = 307 bits (786), Expect = 3e-81
Identities = 148/252 (58%), Positives = 187/252 (74%)
Frame = +2
Query: 2 FYIWAIKQKGLRSSVSQNLVIDLLIKDDGFDLYWKTLEELKNCKAPIVSDAFLVLIEAYA 181
F+IWA K+K +S V +NL+ D+L +D GFDLYW L++LK PI S+AF LI Y
Sbjct: 72 FFIWAAKRKRFQSWVPKNLIADMLAQDGGFDLYWNVLDKLKFSGIPIASNAFAALIWGYW 131
Query: 182 KSGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMVKSNCRPNQA 361
K AEKAVE+FG+M+ F C PN++TYN ILH+ +QK+ +LLA+AVYN M+K N +PN +
Sbjct: 132 KVNKAEKAVEAFGRMKDFDCKPNIYTYNMILHIAVQKDAILLALAVYNVMLKLNSQPNSS 191
Query: 362 TYSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNTVILSGLCEARSTDDALRHFYRM 541
T+SILIDG KSGRT DAL LFD+M RG+ P+ IT TVILSGLC+A+ TDDA R M
Sbjct: 192 TFSILIDGLCKSGRTHDALALFDEMTERGVLPSKITYTVILSGLCQAKRTDDAYRLLNVM 251
Query: 542 KESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKDGFVLDLNGYSCLIDSFFRTKRS 721
K GC PD +TYNALLNGFCKLGRVDE LL SFE +G+++D+ GY+CLID F RTKR
Sbjct: 252 KTRGCRPDFVTYNALLNGFCKLGRVDETHALLRSFENEGYLMDIKGYTCLIDGFVRTKRI 311
Query: 722 DEAHKWYRKMLE 757
DEA ++K+ E
Sbjct: 312 DEAQSVFKKLFE 323
Score = 93.6 bits (231), Expect = 7e-17
Identities = 61/226 (26%), Positives = 97/226 (42%)
Frame = +2
Query: 53 NLVIDLLIKDDGFDLYWKTLEELKNCKAPIVSDAFLVLIEAYAKSGMAEKAVESFGKMRH 232
N+++ + ++ D L + + S F +LI+ KSG A+ F +M
Sbjct: 159 NMILHIAVQKDAILLALAVYNVMLKLNSQPNSSTFSILIDGLCKSGRTHDALALFDEMTE 218
Query: 233 FGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMVKSNCRPNQATYSILIDGSYKSGRTQD 412
G P+ TY IL + Q + A + N M CRP+ TY+ L++G K GR +
Sbjct: 219 RGVLPSKITYTVILSGLCQAKRTDDAYRLLNVMKTRGCRPDFVTYNALLNGFCKLGRVDE 278
Query: 413 ALRLFDDMMHRGIAPNVITNTVILSGLCEARSTDDALRHFYRMKESGCCPDLITYNALLN 592
L + G ++ T ++ G + D+A F ++ E PD++ Y ++
Sbjct: 279 THALLRSFENEGYLMDIKGYTCLIDGFVRTKRIDEAQSVFKKLFEKNVVPDVVLYTTMIR 338
Query: 593 GFCKLGRVDEALELLPSFEKDGFVLDLNGYSCLIDSFFRTKRSDEA 730
G GRV EAL LL G D Y+ LI F D+A
Sbjct: 339 GLSGAGRVKEALSLLRDMTGRGVQPDTQCYNTLIKGFCDVGILDQA 384
Score = 92.8 bits (229), Expect = 1e-16
Identities = 66/272 (24%), Positives = 119/272 (43%), Gaps = 48/272 (17%)
Frame = +2
Query: 80 DDGFDLYWKTLEELKNCKAPIVSDAFLVLIEAYAKSGMAEKAVESFGKMRHFGCSPNVFT 259
D+ ++ K E KN +V + +I + +G ++A+ M G P+
Sbjct: 312 DEAQSVFKKLFE--KNVVPDVV--LYTTMIRGLSGAGRVKEALSLLRDMTGRGVQPDTQC 367
Query: 260 YNSILHLMLQKEVLLLAMAVYNQMVKSNCRPNQATYSILIDGSYKSGRTQDALRLFDDMM 439
YN+++ +L A ++ ++ +++C P+ TYSI+I G ++G ++A +F++M
Sbjct: 368 YNTLIKGFCDVGILDQARSLQLEISENDCFPDTYTYSIVICGMCRNGLVEEARHIFNEME 427
Query: 440 HRGIAPNVITNTVILSGLCEARSTDDALRHFYRMK------------------------- 544
G P+V+T ++ GLC+A ++A FY+M+
Sbjct: 428 KLGCFPSVVTFNTLIDGLCKAGELEEAHLMFYKMEIGKNPSLFLRLSQGADRVLDSVSLQ 487
Query: 545 -----------------------ESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKD 655
+ G P+++TYN L+NG CK G ++ AL+L +
Sbjct: 488 KMIEKLCETGKILKAYKLLMQLADCGFVPNIVTYNILINGLCKSGIINGALKLFQELQVK 547
Query: 656 GFVLDLNGYSCLIDSFFRTKRSDEAHKWYRKM 751
G D Y LID R R DE+ K + +M
Sbjct: 548 GHFPDSITYGTLIDGLQRVGRVDESFKLFDQM 579
Score = 89.7 bits (221), Expect = 1e-15
Identities = 57/242 (23%), Positives = 112/242 (46%), Gaps = 2/242 (0%)
Frame = +2
Query: 32 LRSSVSQNLVIDLLIKDDGFDLYWKTLEELKN--CKAPIVSDAFLVLIEAYAKSGMAEKA 205
L S ++ +++ L + D ++ L +K C+ V+ + L+ + K G ++
Sbjct: 222 LPSKITYTVILSGLCQAKRTDDAYRLLNVMKTRGCRPDFVT--YNALLNGFCKLGRVDET 279
Query: 206 VESFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMVKSNCRPNQATYSILIDG 385
+ G ++ Y ++ ++ + + A +V+ ++ + N P+ Y+ +I G
Sbjct: 280 HALLRSFENEGYLMDIKGYTCLIDGFVRTKRIDEAQSVFKKLFEKNVVPDVVLYTTMIRG 339
Query: 386 SYKSGRTQDALRLFDDMMHRGIAPNVITNTVILSGLCEARSTDDALRHFYRMKESGCCPD 565
+GR ++AL L DM RG+ P+ ++ G C+ D A + E+ C PD
Sbjct: 340 LSGAGRVKEALSLLRDMTGRGVQPDTQCYNTLIKGFCDVGILDQARSLQLEISENDCFPD 399
Query: 566 LITYNALLNGFCKLGRVDEALELLPSFEKDGFVLDLNGYSCLIDSFFRTKRSDEAHKWYR 745
TY+ ++ G C+ G V+EA + EK G + ++ LID + +EAH +
Sbjct: 400 TYTYSIVICGMCRNGLVEEARHIFNEMEKLGCFPSVVTFNTLIDGLCKAGELEEAHLMFY 459
Query: 746 KM 751
KM
Sbjct: 460 KM 461
Score = 85.9 bits (211), Expect = 1e-14
Identities = 49/193 (25%), Positives = 99/193 (51%), Gaps = 13/193 (6%)
Frame = +2
Query: 155 FLVLIEAYAKSGMAEKAVESFGKMRHFGCSPNVFTYNSIL------------HLMLQKEV 298
+ ++I ++G+ E+A F +M GC P+V T+N+++ HLM K
Sbjct: 403 YSIVICGMCRNGLVEEARHIFNEMEKLGCFPSVVTFNTLIDGLCKAGELEEAHLMFYKME 462
Query: 299 LLLAMAVYNQMVKSNCRP-NQATYSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNT 475
+ +++ ++ + R + + +I+ ++G+ A +L + G PN++T
Sbjct: 463 IGKNPSLFLRLSQGADRVLDSVSLQKMIEKLCETGKILKAYKLLMQLADCGFVPNIVTYN 522
Query: 476 VILSGLCEARSTDDALRHFYRMKESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKD 655
++++GLC++ + AL+ F ++ G PD ITY L++G ++GRVDE+ +L K+
Sbjct: 523 ILINGLCKSGIINGALKLFQELQVKGHFPDSITYGTLIDGLQRVGRVDESFKLFDQMSKN 582
Query: 656 GFVLDLNGYSCLI 694
G + Y L+
Sbjct: 583 GCMPSAEVYKSLM 595
>ref|XP_004233739.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Solanum lycopersicum]
Length = 753
Score = 302 bits (774), Expect = 7e-80
Identities = 145/252 (57%), Positives = 185/252 (73%)
Frame = +2
Query: 2 FYIWAIKQKGLRSSVSQNLVIDLLIKDDGFDLYWKTLEELKNCKAPIVSDAFLVLIEAYA 181
F+IWA K+K + + +NL+ D+L KD GFDLYW L++LK PI S+AF LI Y
Sbjct: 50 FFIWAAKRKRFQRWIPKNLIADMLSKDGGFDLYWNVLDKLKFSGIPIASNAFAALIWGYW 109
Query: 182 KSGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMVKSNCRPNQA 361
K AEKA+E+F +M+ F C PN++TYN ILH+ +QK+ +LLA+AVYN M+K N +PN +
Sbjct: 110 KVNKAEKAIEAFSRMKDFDCKPNIYTYNMILHIAVQKDAILLALAVYNVMLKLNSQPNSS 169
Query: 362 TYSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNTVILSGLCEARSTDDALRHFYRM 541
T+SILIDG KSGRT DAL LFD+M RG+ P+ IT TVILSGLC+A+ TDDA R M
Sbjct: 170 TFSILIDGLCKSGRTHDALALFDEMTERGVLPSKITYTVILSGLCQAKRTDDAYRLLNVM 229
Query: 542 KESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKDGFVLDLNGYSCLIDSFFRTKRS 721
K GC PD +TYNALLNGFCKLGRVDEA LL SFE +G+++D+ GY+CLID F RTKR
Sbjct: 230 KTRGCKPDFVTYNALLNGFCKLGRVDEAHVLLRSFENEGYLMDIKGYTCLIDGFVRTKRI 289
Query: 722 DEAHKWYRKMLE 757
DEA ++ + E
Sbjct: 290 DEAQSVFKNLFE 301
Score = 93.6 bits (231), Expect = 7e-17
Identities = 61/247 (24%), Positives = 109/247 (44%), Gaps = 48/247 (19%)
Frame = +2
Query: 155 FLVLIEAYAKSGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMV 334
+ +I + +G ++A+ M G P+ YN+++ VL A ++ ++
Sbjct: 311 YTTMIRGLSGAGRVKEALSLLRDMTGRGVQPDTQCYNTLIKGFCDMGVLDQARSLQLEIS 370
Query: 335 KSNCRPNQATYSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNTVILSGLCEARSTD 514
+++C P+ TYSI+I G ++G ++A +F++M G P+V+T ++ GLC+A +
Sbjct: 371 ENDCFPDTYTYSIVICGMCRNGLVEEARHIFNEMEKLGCFPSVVTFNTLIDGLCKAGELE 430
Query: 515 DALRHFYRMK------------------------------------------------ES 550
+A FY+M+ +
Sbjct: 431 EAHLMFYKMEIGKNPSLFLRLSQGADRVLDSVSLQKMIEKLCETGKIHKAYKLLMQLADC 490
Query: 551 GCCPDLITYNALLNGFCKLGRVDEALELLPSFEKDGFVLDLNGYSCLIDSFFRTKRSDEA 730
G P+++TYN L+NG CK G ++ AL+L + G D Y LID R R DE+
Sbjct: 491 GFVPNIVTYNILINGLCKSGLINGALKLFQELQVKGHFPDSITYGTLIDGLQRVGRVDES 550
Query: 731 HKWYRKM 751
K + +M
Sbjct: 551 FKLFDQM 557
Score = 91.3 bits (225), Expect = 3e-16
Identities = 59/242 (24%), Positives = 112/242 (46%), Gaps = 2/242 (0%)
Frame = +2
Query: 32 LRSSVSQNLVIDLLIKDDGFDLYWKTLEELKN--CKAPIVSDAFLVLIEAYAKSGMAEKA 205
L S ++ +++ L + D ++ L +K CK V+ + L+ + K G ++A
Sbjct: 200 LPSKITYTVILSGLCQAKRTDDAYRLLNVMKTRGCKPDFVT--YNALLNGFCKLGRVDEA 257
Query: 206 VESFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMVKSNCRPNQATYSILIDG 385
+ G ++ Y ++ ++ + + A +V+ + + N P+ Y+ +I G
Sbjct: 258 HVLLRSFENEGYLMDIKGYTCLIDGFVRTKRIDEAQSVFKNLFEKNVVPDVVLYTTMIRG 317
Query: 386 SYKSGRTQDALRLFDDMMHRGIAPNVITNTVILSGLCEARSTDDALRHFYRMKESGCCPD 565
+GR ++AL L DM RG+ P+ ++ G C+ D A + E+ C PD
Sbjct: 318 LSGAGRVKEALSLLRDMTGRGVQPDTQCYNTLIKGFCDMGVLDQARSLQLEISENDCFPD 377
Query: 566 LITYNALLNGFCKLGRVDEALELLPSFEKDGFVLDLNGYSCLIDSFFRTKRSDEAHKWYR 745
TY+ ++ G C+ G V+EA + EK G + ++ LID + +EAH +
Sbjct: 378 TYTYSIVICGMCRNGLVEEARHIFNEMEKLGCFPSVVTFNTLIDGLCKAGELEEAHLMFY 437
Query: 746 KM 751
KM
Sbjct: 438 KM 439
Score = 86.7 bits (213), Expect = 8e-15
Identities = 49/193 (25%), Positives = 99/193 (51%), Gaps = 13/193 (6%)
Frame = +2
Query: 155 FLVLIEAYAKSGMAEKAVESFGKMRHFGCSPNVFTYNSIL------------HLMLQKEV 298
+ ++I ++G+ E+A F +M GC P+V T+N+++ HLM K
Sbjct: 381 YSIVICGMCRNGLVEEARHIFNEMEKLGCFPSVVTFNTLIDGLCKAGELEEAHLMFYKME 440
Query: 299 LLLAMAVYNQMVKSNCRP-NQATYSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNT 475
+ +++ ++ + R + + +I+ ++G+ A +L + G PN++T
Sbjct: 441 IGKNPSLFLRLSQGADRVLDSVSLQKMIEKLCETGKIHKAYKLLMQLADCGFVPNIVTYN 500
Query: 476 VILSGLCEARSTDDALRHFYRMKESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKD 655
++++GLC++ + AL+ F ++ G PD ITY L++G ++GRVDE+ +L K+
Sbjct: 501 ILINGLCKSGLINGALKLFQELQVKGHFPDSITYGTLIDGLQRVGRVDESFKLFDQMSKN 560
Query: 656 GFVLDLNGYSCLI 694
G + Y L+
Sbjct: 561 GCMPSAEVYKSLM 573
>ref|XP_006301385.1| hypothetical protein CARUB_v10021797mg [Capsella rubella]
gi|482570095|gb|EOA34283.1| hypothetical protein
CARUB_v10021797mg [Capsella rubella]
Length = 780
Score = 292 bits (748), Expect = 8e-77
Identities = 146/253 (57%), Positives = 187/253 (73%), Gaps = 1/253 (0%)
Frame = +2
Query: 2 FYIWAIKQKGLRSSVSQNLVIDLLIKDDGFDLYWKTLEELKNCKAPIVSDAFLVLIEAYA 181
F+IWA +++ LRS S LVI++L +DDG DLYW+TLEELK+ + S F VLI AYA
Sbjct: 79 FFIWASRRERLRSRDSFGLVINMLSQDDGCDLYWQTLEELKSGGVSVDSYCFCVLISAYA 138
Query: 182 KSGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKEVL-LLAMAVYNQMVKSNCRPNQ 358
K GMAEKAVESFG+M+ F C P+VFTYN IL +M+++EV +LA AVYN+M+K NC PN+
Sbjct: 139 KMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNR 198
Query: 359 ATYSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNTVILSGLCEARSTDDALRHFYR 538
T+ IL+DG YK GRT DA ++FDDM RGI+PN +T T+++SGLC+ S +DA + FY
Sbjct: 199 YTFCILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSAEDARKLFYE 258
Query: 539 MKESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKDGFVLDLNGYSCLIDSFFRTKR 718
MK G PD + YNALL+GFCKLGR+ EA ELL FEKDGFVL L GYS L+D+ FR R
Sbjct: 259 MKAGGDSPDSVAYNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLVDALFRANR 318
Query: 719 SDEAHKWYRKMLE 757
+A + Y ML+
Sbjct: 319 YAQAFELYANMLK 331
Score = 100 bits (249), Expect = 6e-19
Identities = 70/257 (27%), Positives = 120/257 (46%), Gaps = 39/257 (15%)
Frame = +2
Query: 89 FDLYWKTLEELKNCKAPIVSDAFLVLIEAYAKSGMAEKAVESFGKMRHFGCSPNVFTYNS 268
F+LY L+ N K IV + +LI+ +K+G + A++ M G SP+ + YN+
Sbjct: 323 FELYANMLKN--NIKPDIVF--YTILIQGLSKAGKIKDALKLLSSMPSKGISPDTYCYNA 378
Query: 269 ILHLMLQKEVLLLAMAVYNQMVKSNCRPNQATYSILIDGSYKSGRTQDALRLFDDMMHRG 448
++ + ++ +L A ++ +M + P+ T+++LI ++G + A +F ++ G
Sbjct: 379 VITALCERGILEEARSLQLEMSEKESFPDACTHTVLICSMCRNGLVRKAEEIFVEIEKSG 438
Query: 449 IAPNVITNTVILSGLCEARSTDDAL-----------------------RHFYRMKESGCC 559
+P+V T ++ GLC++ +A R F M ESG
Sbjct: 439 CSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSI 498
Query: 560 ----------------PDLITYNALLNGFCKLGRVDEALELLPSFEKDGFVLDLNGYSCL 691
PD++TYN L+NGFCK G +D AL+LL + G D Y+ L
Sbjct: 499 LKAYRDLAHFADTGNSPDIVTYNVLINGFCKAGDIDGALKLLKVLQLKGLSPDSVTYNTL 558
Query: 692 IDSFFRTKRSDEAHKWY 742
I+ R R +EA K +
Sbjct: 559 INGLHRVGREEEALKLF 575
Score = 92.0 bits (227), Expect = 2e-16
Identities = 57/205 (27%), Positives = 96/205 (46%)
Frame = +2
Query: 146 SDAFLVLIEAYAKSGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYN 325
S A+ L++ + K G +A E G + Y+S++ + + A +Y
Sbjct: 268 SVAYNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLVDALFRANRYAQAFELYA 327
Query: 326 QMVKSNCRPNQATYSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNTVILSGLCEAR 505
M+K+N +P+ Y+ILI G K+G+ +DAL+L M +GI+P+ +++ LCE
Sbjct: 328 NMLKNNIKPDIVFYTILIQGLSKAGKIKDALKLLSSMPSKGISPDTYCYNAVITALCERG 387
Query: 506 STDDALRHFYRMKESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKDGFVLDLNGYS 685
++A M E PD T+ L+ C+ G V +A E+ EK G + ++
Sbjct: 388 ILEEARSLQLEMSEKESFPDACTHTVLICSMCRNGLVRKAEEIFVEIEKSGCSPSVATFN 447
Query: 686 CLIDSFFRTKRSDEAHKWYRKMLEG 760
LID ++ EA KM G
Sbjct: 448 ALIDGLCKSGELKEARLLLHKMEVG 472
>ref|NP_178072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200774|sp|Q9SAJ5.1|PP133_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g79540 gi|4835755|gb|AAD30222.1|AC007202_4 Contains
similarity to gi|2827663 F18F4.190 membrane-associated
salt-inducible-like protein from Arabidopsis thaliana
BAC gb|AL021637 [Arabidopsis thaliana]
gi|332198140|gb|AEE36261.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 780
Score = 292 bits (748), Expect = 8e-77
Identities = 147/253 (58%), Positives = 187/253 (73%), Gaps = 1/253 (0%)
Frame = +2
Query: 2 FYIWAIKQKGLRSSVSQNLVIDLLIKDDGFDLYWKTLEELKNCKAPIVSDAFLVLIEAYA 181
F+IWA +++ LRS S LVID+L +D+G DLYW+TLEELK+ + S F VLI AYA
Sbjct: 79 FFIWASRRERLRSRESFGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYA 138
Query: 182 KSGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKEVL-LLAMAVYNQMVKSNCRPNQ 358
K GMAEKAVESFG+M+ F C P+VFTYN IL +M+++EV +LA AVYN+M+K NC PN
Sbjct: 139 KMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNL 198
Query: 359 ATYSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNTVILSGLCEARSTDDALRHFYR 538
T+ IL+DG YK GRT DA ++FDDM RGI+PN +T T+++SGLC+ S DDA + FY
Sbjct: 199 YTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYE 258
Query: 539 MKESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKDGFVLDLNGYSCLIDSFFRTKR 718
M+ SG PD + +NALL+GFCKLGR+ EA ELL FEKDGFVL L GYS LID FR +R
Sbjct: 259 MQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARR 318
Query: 719 SDEAHKWYRKMLE 757
+A + Y ML+
Sbjct: 319 YTQAFELYANMLK 331
Score = 101 bits (251), Expect = 3e-19
Identities = 65/257 (25%), Positives = 122/257 (47%), Gaps = 39/257 (15%)
Frame = +2
Query: 89 FDLYWKTLEELKNCKAPIVSDAFLVLIEAYAKSGMAEKAVESFGKMRHFGCSPNVFTYNS 268
F+LY L+ KN K I+ + +LI+ +K+G E A++ M G SP+ + YN+
Sbjct: 323 FELYANMLK--KNIKPDII--LYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNA 378
Query: 269 ILHLMLQKEVLLLAMAVYNQMVKSNCRPNQATYSILIDGSYKSGRTQDALRLFDDMMHRG 448
++ + + +L ++ +M ++ P+ T++ILI ++G ++A +F ++ G
Sbjct: 379 VIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSG 438
Query: 449 IAPNVITNTVILSGLCEARSTDDALRHFYRMK---------------------------- 544
+P+V T ++ GLC++ +A ++M+
Sbjct: 439 CSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSI 498
Query: 545 -----------ESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKDGFVLDLNGYSCL 691
++G PD+++YN L+NGFC+ G +D AL+LL + G D Y+ L
Sbjct: 499 LKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTL 558
Query: 692 IDSFFRTKRSDEAHKWY 742
I+ R R +EA K +
Sbjct: 559 INGLHRVGREEEAFKLF 575
Score = 87.0 bits (214), Expect = 6e-15
Identities = 56/205 (27%), Positives = 92/205 (44%)
Frame = +2
Query: 146 SDAFLVLIEAYAKSGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYN 325
S A L++ + K G +A E G + Y+S++ + + A +Y
Sbjct: 268 SVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYA 327
Query: 326 QMVKSNCRPNQATYSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNTVILSGLCEAR 505
M+K N +P+ Y+ILI G K+G+ +DAL+L M +GI+P+ ++ LC
Sbjct: 328 NMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRG 387
Query: 506 STDDALRHFYRMKESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKDGFVLDLNGYS 685
++ M E+ PD T+ L+ C+ G V EA E+ EK G + ++
Sbjct: 388 LLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFN 447
Query: 686 CLIDSFFRTKRSDEAHKWYRKMLEG 760
LID ++ EA KM G
Sbjct: 448 ALIDGLCKSGELKEARLLLHKMEVG 472
>ref|XP_007213627.1| hypothetical protein PRUPE_ppa002066mg [Prunus persica]
gi|462409492|gb|EMJ14826.1| hypothetical protein
PRUPE_ppa002066mg [Prunus persica]
Length = 722
Score = 291 bits (745), Expect = 2e-76
Identities = 141/242 (58%), Positives = 184/242 (76%)
Frame = +2
Query: 32 LRSSVSQNLVIDLLIKDDGFDLYWKTLEELKNCKAPIVSDAFLVLIEAYAKSGMAEKAVE 211
L S +S VID+L++DD F+LYW+TLE+L++C PI S AF VLI YAK MAEKAVE
Sbjct: 58 LSSEISS--VIDMLVRDDAFELYWRTLEQLRDCGLPIGSAAFAVLINGYAKLDMAEKAVE 115
Query: 212 SFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMVKSNCRPNQATYSILIDGSY 391
+FG+M+ F C PN F YN+IL++M++KE+ LLA+AVYNQM+KSN P++ TY IL++G
Sbjct: 116 TFGRMKDFNCKPNAFAYNAILYVMVRKELFLLALAVYNQMLKSNHSPSRNTYDILMNGFC 175
Query: 392 KSGRTQDALRLFDDMMHRGIAPNVITNTVILSGLCEARSTDDALRHFYRMKESGCCPDLI 571
K+ +TQDAL++FD+M RGIAPN IT T+++SGLC+A+ T +A MK SGC PDLI
Sbjct: 176 KTRQTQDALQMFDEMTQRGIAPNTITYTIVVSGLCQAKRTHEAYTLVEMMKASGCPPDLI 235
Query: 572 TYNALLNGFCKLGRVDEALELLPSFEKDGFVLDLNGYSCLIDSFFRTKRSDEAHKWYRKM 751
TYNALL+G+CK G + EA LL SFE+DG+VL LNGY+CLI F R DEAH WY KM
Sbjct: 236 TYNALLDGYCKSGSIGEAYALLRSFERDGYVLGLNGYTCLIHGLFIAGRFDEAHGWYSKM 295
Query: 752 LE 757
++
Sbjct: 296 IK 297
Score = 112 bits (280), Expect = 1e-22
Identities = 63/217 (29%), Positives = 109/217 (50%), Gaps = 18/217 (8%)
Frame = +2
Query: 161 VLIEAYAKSGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMVKS 340
++I + +G + A+ +M G P+ + YN+++ +L A +++ + K
Sbjct: 309 IIIRGLSDAGRVKDALNFLNEMNERGLVPDAYCYNAVIKGFCDLGLLDEARSLHLDISKL 368
Query: 341 NCRPNQATYSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNTVILSGLCEARSTDDA 520
+C PN TY+ILI G K+G +A ++F++M G P+V+T ++ GLC R TD A
Sbjct: 369 DCFPNACTYTILICGMCKNGLVGEAQQIFNEMEKLGCVPSVVTFNALIDGLCSNRITDSA 428
Query: 521 ------------------LRHFYRMKESGCCPDLITYNALLNGFCKLGRVDEALELLPSF 646
+ ++ +SG PD+ITYN L+NGFCK G ++ A +L +
Sbjct: 429 SLQTKVEQLCELGLILKAYKLLTQLADSGVTPDIITYNILINGFCKAGNINGAFKLFKNM 488
Query: 647 EKDGFVLDLNGYSCLIDSFFRTKRSDEAHKWYRKMLE 757
+ G D Y LID R R ++A + +M++
Sbjct: 489 QLKGLSPDSITYGTLIDGLQRVDREEDAFVVFDQMVK 525
Score = 95.1 bits (235), Expect = 2e-17
Identities = 67/273 (24%), Positives = 117/273 (42%), Gaps = 35/273 (12%)
Frame = +2
Query: 38 SSVSQNLVIDLLIKDDGFDLYWKTLEELKNCKAPIVSDAFLVLIEAYAKSGMAEKAVESF 217
++ + N ++ ++++ + F L ++ + + +L+ + K+ + A++ F
Sbjct: 128 NAFAYNAILYVMVRKELFLLALAVYNQMLKSNHSPSRNTYDILMNGFCKTRQTQDALQMF 187
Query: 218 GKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMVKSNCRPNQATYSILIDGSYKS 397
+M G +PN TY ++ + Q + A + M S C P+ TY+ L+DG KS
Sbjct: 188 DEMTQRGIAPNTITYTIVVSGLCQAKRTHEAYTLVEMMKASGCPPDLITYNALLDGYCKS 247
Query: 398 GRTQDALRL----------------------------FDD-------MMHRGIAPNVITN 472
G +A L FD+ M+ +GI P+++
Sbjct: 248 GSIGEAYALLRSFERDGYVLGLNGYTCLIHGLFIAGRFDEAHGWYSKMIKKGIKPDIVLC 307
Query: 473 TVILSGLCEARSTDDALRHFYRMKESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEK 652
T+I+ GL +A DAL M E G PD YNA++ GFC LG +DEA L K
Sbjct: 308 TIIIRGLSDAGRVKDALNFLNEMNERGLVPDAYCYNAVIKGFCDLGLLDEARSLHLDISK 367
Query: 653 DGFVLDLNGYSCLIDSFFRTKRSDEAHKWYRKM 751
+ Y+ LI + EA + + +M
Sbjct: 368 LDCFPNACTYTILICGMCKNGLVGEAQQIFNEM 400
Score = 87.4 bits (215), Expect = 5e-15
Identities = 58/237 (24%), Positives = 106/237 (44%), Gaps = 1/237 (0%)
Frame = +2
Query: 23 QKGLR-SSVSQNLVIDLLIKDDGFDLYWKTLEELKNCKAPIVSDAFLVLIEAYAKSGMAE 199
Q+G+ ++++ +V+ L + + +E +K P + L++ Y KSG
Sbjct: 192 QRGIAPNTITYTIVVSGLCQAKRTHEAYTLVEMMKASGCPPDLITYNALLDGYCKSGSIG 251
Query: 200 KAVESFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMVKSNCRPNQATYSILI 379
+A G + Y ++H + A Y++M+K +P+ +I+I
Sbjct: 252 EAYALLRSFERDGYVLGLNGYTCLIHGLFIAGRFDEAHGWYSKMIKKGIKPDIVLCTIII 311
Query: 380 DGSYKSGRTQDALRLFDDMMHRGIAPNVITNTVILSGLCEARSTDDALRHFYRMKESGCC 559
G +GR +DAL ++M RG+ P+ ++ G C+ D+A + + C
Sbjct: 312 RGLSDAGRVKDALNFLNEMNERGLVPDAYCYNAVIKGFCDLGLLDEARSLHLDISKLDCF 371
Query: 560 PDLITYNALLNGFCKLGRVDEALELLPSFEKDGFVLDLNGYSCLIDSFFRTKRSDEA 730
P+ TY L+ G CK G V EA ++ EK G V + ++ LID + +D A
Sbjct: 372 PNACTYTILICGMCKNGLVGEAQQIFNEMEKLGCVPSVVTFNALIDGLCSNRITDSA 428
Score = 85.5 bits (210), Expect = 2e-14
Identities = 48/178 (26%), Positives = 86/178 (48%), Gaps = 18/178 (10%)
Frame = +2
Query: 155 FLVLIEAYAKSGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKEV------------ 298
+ +LI K+G+ +A + F +M GC P+V T+N+++ + +
Sbjct: 377 YTILICGMCKNGLVGEAQQIFNEMEKLGCVPSVVTFNALIDGLCSNRITDSASLQTKVEQ 436
Query: 299 ------LLLAMAVYNQMVKSNCRPNQATYSILIDGSYKSGRTQDALRLFDDMMHRGIAPN 460
+L A + Q+ S P+ TY+ILI+G K+G A +LF +M +G++P+
Sbjct: 437 LCELGLILKAYKLLTQLADSGVTPDIITYNILINGFCKAGNINGAFKLFKNMQLKGLSPD 496
Query: 461 VITNTVILSGLCEARSTDDALRHFYRMKESGCCPDLITYNALLNGFCKLGRVDEALEL 634
IT ++ GL +DA F +M ++GC P Y +L+ C+ ++ A L
Sbjct: 497 SITYGTLIDGLQRVDREEDAFVVFDQMVKNGCMPSSAVYKSLMTWSCRRKKISLAFSL 554
Score = 83.2 bits (204), Expect = 9e-14
Identities = 55/225 (24%), Positives = 102/225 (45%), Gaps = 20/225 (8%)
Frame = +2
Query: 140 IVSDAFL--VLIEAYAKSGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAM 313
+V DA+ +I+ + G+ ++A + C PN TY ++ M + ++ A
Sbjct: 335 LVPDAYCYNAVIKGFCDLGLLDEARSLHLDISKLDCFPNACTYTILICGMCKNGLVGEAQ 394
Query: 314 AVYNQMVKSNCRPNQATYSILIDGSYKSGRTQDA------------------LRLFDDMM 439
++N+M K C P+ T++ LIDG + T A +L +
Sbjct: 395 QIFNEMEKLGCVPSVVTFNALIDGLCSNRITDSASLQTKVEQLCELGLILKAYKLLTQLA 454
Query: 440 HRGIAPNVITNTVILSGLCEARSTDDALRHFYRMKESGCCPDLITYNALLNGFCKLGRVD 619
G+ P++IT ++++G C+A + + A + F M+ G PD ITY L++G ++ R +
Sbjct: 455 DSGVTPDIITYNILINGFCKAGNINGAFKLFKNMQLKGLSPDSITYGTLIDGLQRVDREE 514
Query: 620 EALELLPSFEKDGFVLDLNGYSCLIDSFFRTKRSDEAHKWYRKML 754
+A + K+G + Y L+ R K+ A + K L
Sbjct: 515 DAFVVFDQMVKNGCMPSSAVYKSLMTWSCRRKKISLAFSLWLKYL 559
Score = 68.9 bits (167), Expect = 2e-09
Identities = 60/246 (24%), Positives = 106/246 (43%), Gaps = 34/246 (13%)
Frame = +2
Query: 32 LRSSVSQNLVIDLLIKDDGFDLYWKTLEELKNCKAPIVSDAFLVLIEAYAKSGMAEKAVE 211
L++ V Q + L++K +K L +L + + +LI + K+G A +
Sbjct: 430 LQTKVEQLCELGLILKA------YKLLTQLADSGVTPDIITYNILINGFCKAGNINGAFK 483
Query: 212 SFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMVKSNCRPNQATYSIL----- 376
F M+ G SP+ TY +++ + + + A V++QMVK+ C P+ A Y L
Sbjct: 484 LFKNMQLKGLSPDSITYGTLIDGLQRVDREEDAFVVFDQMVKNGCMPSSAVYKSLMTWSC 543
Query: 377 -----------------------------IDGSYKSGRTQDALRLFDDMMHRGIAPNVIT 469
I+ +K G+T+ A+R +M +++
Sbjct: 544 RRKKISLAFSLWLKYLSNLPLREEEKIKAIEEDFKEGKTEKAIRGLLEMDVNFKDFDLVP 603
Query: 470 NTVILSGLCEARSTDDALRHFYRMKESGCCPDLITYNALLNGFCKLGRVDEALELLPSFE 649
T++L GLC+ R +ALR F + E + L+NG CK G +D A+ +
Sbjct: 604 CTILLIGLCQVRRVHEALRIFSVLDEYKVIVTPPSCVHLINGLCKEGNLDLAIGVFRYTL 663
Query: 650 KDGFVL 667
+ GF+L
Sbjct: 664 EKGFML 669
Score = 57.0 bits (136), Expect = 7e-06
Identities = 53/245 (21%), Positives = 93/245 (37%), Gaps = 35/245 (14%)
Frame = +2
Query: 128 CKAPIVSDAFL-VLIEAYAKSGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKEVLL 304
C I A L +E + G+ KA + ++ G +P++ TYN +++ + +
Sbjct: 420 CSNRITDSASLQTKVEQLCELGLILKAYKLLTQLADSGVTPDIITYNILINGFCKAGNIN 479
Query: 305 LAMAVYNQMVKSNCRPNQATYSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNTVIL 484
A ++ M P+ TY LIDG + R +DA +FD M+ G P+ ++
Sbjct: 480 GAFKLFKNMQLKGLSPDSITYGTLIDGLQRVDREEDAFVVFDQMVKNGCMPSSAVYKSLM 539
Query: 485 SGLCEARS----------------------------------TDDALRHFYRMKESGCCP 562
+ C + T+ A+R M +
Sbjct: 540 TWSCRRKKISLAFSLWLKYLSNLPLREEEKIKAIEEDFKEGKTEKAIRGLLEMDVNFKDF 599
Query: 563 DLITYNALLNGFCKLGRVDEALELLPSFEKDGFVLDLNGYSCLIDSFFRTKRSDEAHKWY 742
DL+ LL G C++ RV EAL + ++ ++ LI+ + D A +
Sbjct: 600 DLVPCTILLIGLCQVRRVHEALRIFSVLDEYKVIVTPPSCVHLINGLCKEGNLDLAIGVF 659
Query: 743 RKMLE 757
R LE
Sbjct: 660 RYTLE 664
>ref|XP_002889252.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297335093|gb|EFH65511.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 780
Score = 290 bits (743), Expect = 3e-76
Identities = 145/253 (57%), Positives = 187/253 (73%), Gaps = 1/253 (0%)
Frame = +2
Query: 2 FYIWAIKQKGLRSSVSQNLVIDLLIKDDGFDLYWKTLEELKNCKAPIVSDAFLVLIEAYA 181
F+IWA +++ LRS S LVID+L +D+G DLYW+TLEELK+ + S F VLI AYA
Sbjct: 79 FFIWASRRERLRSGESFGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYA 138
Query: 182 KSGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKEVL-LLAMAVYNQMVKSNCRPNQ 358
K G+AEKAVESFG+M+ F C P+VFTYN IL +M++++V +LA AVYN+M+K NC PN
Sbjct: 139 KMGLAEKAVESFGRMKEFDCRPDVFTYNVILRIMMREDVFFMLAFAVYNEMLKCNCSPNL 198
Query: 359 ATYSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNTVILSGLCEARSTDDALRHFYR 538
T+ IL+DG YK GRT DA ++FDDM RGI+PN +T T+++SGLC+ S +DA + FY
Sbjct: 199 YTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSPEDARKLFYE 258
Query: 539 MKESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKDGFVLDLNGYSCLIDSFFRTKR 718
MK SG PD + +NALL+GFCKLGR+ EA ELL FEKDGFVL L GYS LID FR +R
Sbjct: 259 MKASGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARR 318
Query: 719 SDEAHKWYRKMLE 757
+A + Y ML+
Sbjct: 319 YTQAFELYANMLK 331
Score = 94.4 bits (233), Expect = 4e-17
Identities = 63/257 (24%), Positives = 121/257 (47%), Gaps = 39/257 (15%)
Frame = +2
Query: 89 FDLYWKTLEELKNCKAPIVSDAFLVLIEAYAKSGMAEKAVESFGKMRHFGCSPNVFTYNS 268
F+LY L+ +N K I+ + +LI+ +K+G E A++ M G +P+ + YN+
Sbjct: 323 FELYANMLK--RNIKPDII--LYTILIQGLSKAGKIEDALKLLRSMPSKGITPDTYCYNA 378
Query: 269 ILHLMLQKEVLLLAMAVYNQMVKSNCRPNQATYSILIDGSYKSGRTQDALRLFDDMMHRG 448
++ + + +L ++ +M ++ P+ T++ILI ++G + A +F ++ G
Sbjct: 379 VIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVRKAEEIFLEIEKSG 438
Query: 449 IAPNVITNTVILSGLCEARSTDDALRHFYRMK---------------------------- 544
+P+V T ++ GLC++ +A ++M+
Sbjct: 439 CSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLAHSGNRSFDTMVQSGSI 498
Query: 545 -----------ESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKDGFVLDLNGYSCL 691
++G PD+++YN L+NGFC+ G +D AL+LL + G D Y+ L
Sbjct: 499 LKAYKNLAHFADTGNSPDIVSYNVLINGFCREGDIDGALKLLNVLQLKGLSPDSVTYNTL 558
Query: 692 IDSFFRTKRSDEAHKWY 742
I+ R R +EA K +
Sbjct: 559 INGLHRVGREEEAFKLF 575
Score = 83.2 bits (204), Expect = 9e-14
Identities = 55/205 (26%), Positives = 91/205 (44%)
Frame = +2
Query: 146 SDAFLVLIEAYAKSGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYN 325
S A L++ + K G +A E G + Y+S++ + + A +Y
Sbjct: 268 SVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYA 327
Query: 326 QMVKSNCRPNQATYSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNTVILSGLCEAR 505
M+K N +P+ Y+ILI G K+G+ +DAL+L M +GI P+ ++ LC
Sbjct: 328 NMLKRNIKPDIILYTILIQGLSKAGKIEDALKLLRSMPSKGITPDTYCYNAVIKALCGRG 387
Query: 506 STDDALRHFYRMKESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKDGFVLDLNGYS 685
++ M E+ PD T+ L+ C+ G V +A E+ EK G + ++
Sbjct: 388 LLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVRKAEEIFLEIEKSGCSPSVATFN 447
Query: 686 CLIDSFFRTKRSDEAHKWYRKMLEG 760
LID ++ EA KM G
Sbjct: 448 ALIDGLCKSGELKEARLLLHKMEVG 472
>ref|XP_006389878.1| hypothetical protein EUTSA_v10018150mg [Eutrema salsugineum]
gi|557086312|gb|ESQ27164.1| hypothetical protein
EUTSA_v10018150mg [Eutrema salsugineum]
Length = 781
Score = 284 bits (726), Expect = 3e-74
Identities = 144/253 (56%), Positives = 183/253 (72%), Gaps = 1/253 (0%)
Frame = +2
Query: 2 FYIWAIKQKGLRSSVSQNLVIDLLIKDDGFDLYWKTLEELKNCKAPIVSDAFLVLIEAYA 181
F+IWA +++ LRS S LVI++L +++G DLYW+TLEELK+ + S F VLI AYA
Sbjct: 81 FFIWASRRERLRSRESFRLVINILSEENGCDLYWQTLEELKSGGVSVDSYCFCVLISAYA 140
Query: 182 KSGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKEVL-LLAMAVYNQMVKSNCRPNQ 358
K GMAEKAVESFG+M+ F C P+VFTYN IL +M+++EV +LA AVYN+M+K NC PN+
Sbjct: 141 KMGMAEKAVESFGRMKEFDCRPDVFTYNVILQVMMREEVFFMLAFAVYNEMLKCNCSPNR 200
Query: 359 ATYSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNTVILSGLCEARSTDDALRHFYR 538
T+ IL+DG YK GR DA ++FDDM RGI+PN +T T+++SGLC+ S +DA R F+
Sbjct: 201 YTFGILMDGLYKKGRMVDAQKMFDDMTARGISPNRVTYTILISGLCQRGSAEDARRLFHE 260
Query: 539 MKESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKDGFVLDLNGYSCLIDSFFRTKR 718
MK G PD NALL+GFCK GR+ EA ELL FEKDGF+L L GYS LID FR R
Sbjct: 261 MKAGGHSPDSAALNALLDGFCKSGRMVEAFELLRLFEKDGFILGLRGYSSLIDGLFRASR 320
Query: 719 SDEAHKWYRKMLE 757
DEA + Y MLE
Sbjct: 321 YDEAFELYATMLE 333
Score = 113 bits (282), Expect = 8e-23
Identities = 75/261 (28%), Positives = 126/261 (48%), Gaps = 40/261 (15%)
Frame = +2
Query: 80 DDGFDLYWKTLEELKNCKAPIVSDAFLVLIEAYAKSGMAEKAVESFGKMRHFGCSPNVFT 259
D+ F+LY LE KN K ++ + +LI +K+G E A++ F M G P+ +
Sbjct: 322 DEAFELYATMLE--KNIKPDVL--LYTILIRGLSKAGKIEDALKLFSSMSSKGIRPDTYC 377
Query: 260 YNSILHLMLQKEVLLLAMAVYNQMVKSNCRPNQATYSILIDGSYKSGRTQDALRLFDDMM 439
YN+++ + ++ +L A ++ +M ++ P+ +T++ILI ++G + A +F ++
Sbjct: 378 YNAVIKALCEQGLLEEARSLQLEMSETESFPDASTHTILICSMCRNGLVRKAEEIFKEIE 437
Query: 440 HRGIAPNVITNTVILSGLCEARSTDDAL------------------------RHFYRMKE 547
RGI+P+V T ++ GLC++ +A R F M E
Sbjct: 438 KRGISPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGGNRSFDTMVE 497
Query: 548 SGCC----------------PDLITYNALLNGFCKLGRVDEALELLPSFEKDGFVLDLNG 679
SG PD++TYN L+NGFCK G +D AL+LL + G D
Sbjct: 498 SGSILKAYKDLAHLADAGNSPDIVTYNVLINGFCKAGNIDGALKLLNVLQLKGLSPDSVT 557
Query: 680 YSCLIDSFFRTKRSDEAHKWY 742
Y+ LI+ R R +EA K +
Sbjct: 558 YNTLINGLHRVGREEEAFKLF 578
Score = 90.5 bits (223), Expect = 6e-16
Identities = 58/205 (28%), Positives = 95/205 (46%)
Frame = +2
Query: 146 SDAFLVLIEAYAKSGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYN 325
S A L++ + KSG +A E G + Y+S++ + + A +Y
Sbjct: 270 SAALNALLDGFCKSGRMVEAFELLRLFEKDGFILGLRGYSSLIDGLFRASRYDEAFELYA 329
Query: 326 QMVKSNCRPNQATYSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNTVILSGLCEAR 505
M++ N +P+ Y+ILI G K+G+ +DAL+LF M +GI P+ ++ LCE
Sbjct: 330 TMLEKNIKPDVLLYTILIRGLSKAGKIEDALKLFSSMSSKGIRPDTYCYNAVIKALCEQG 389
Query: 506 STDDALRHFYRMKESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKDGFVLDLNGYS 685
++A M E+ PD T+ L+ C+ G V +A E+ EK G + ++
Sbjct: 390 LLEEARSLQLEMSETESFPDASTHTILICSMCRNGLVRKAEEIFKEIEKRGISPSVATFN 449
Query: 686 CLIDSFFRTKRSDEAHKWYRKMLEG 760
LID ++ EA KM G
Sbjct: 450 ALIDGLCKSGELKEARLLLHKMEVG 474
>ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 783
Score = 282 bits (722), Expect = 8e-74
Identities = 139/250 (55%), Positives = 179/250 (71%)
Frame = +2
Query: 5 YIWAIKQKGLRSSVSQNLVIDLLIKDDGFDLYWKTLEELKNCKAPIVSDAFLVLIEAYAK 184
+IW++K LR Q+L+I LIK++ F+LYWK L+ELKN I S+AF VLIEAY++
Sbjct: 81 FIWSLKSWHLRCRTVQDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSE 140
Query: 185 SGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMVKSNCRPNQAT 364
+GM EKAVESFG MR F C P++F +N ILH +++KE LLA+AVYNQM+K N P+ T
Sbjct: 141 AGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVT 200
Query: 365 YSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNTVILSGLCEARSTDDALRHFYRMK 544
Y ILI G K+ +TQDAL LFD+M RGI PN I +++LSGLC+A+ DA R F +M+
Sbjct: 201 YGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMR 260
Query: 545 ESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKDGFVLDLNGYSCLIDSFFRTKRSD 724
SGC DLITYN LLNGFCK G +D+A LL KDG +L + GY CLI+ FR +R +
Sbjct: 261 ASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYE 320
Query: 725 EAHKWYRKML 754
EAH WY+KML
Sbjct: 321 EAHMWYQKML 330
Score = 105 bits (263), Expect = 1e-20
Identities = 71/268 (26%), Positives = 120/268 (44%), Gaps = 48/268 (17%)
Frame = +2
Query: 98 YWKTLEELKNCKAPIVSDAFLVLIEAYAKSGMAEKAVESFGKMRHFGCSPNVFTYNSILH 277
Y K L E N K ++ + ++I ++ G +A+ G+M G P+ YN+++
Sbjct: 326 YQKMLRE--NIKPDVM--LYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIK 381
Query: 278 LMLQKEVLLLAMAVYNQMVKSNCRPNQATYSILIDGSYKSGRTQDALRLFDDMMHRGIAP 457
L A ++ ++ K +C PN TYSILI G K+G A +F +M G P
Sbjct: 382 GFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLP 441
Query: 458 NVITNTVILSGLCEARSTDDALRHFYRMK------------------------------- 544
+V+T +++GLC+A ++A FY+M+
Sbjct: 442 SVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERL 501
Query: 545 -----------------ESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKDGFVLDL 673
+SG PD+ TYN L+NGFCK G ++ A +L + G + D
Sbjct: 502 CESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDS 561
Query: 674 NGYSCLIDSFFRTKRSDEAHKWYRKMLE 757
Y LID +R R+++A + + +M++
Sbjct: 562 VTYGTLIDGLYRAGRNEDALEIFEQMVK 589
Score = 87.0 bits (214), Expect = 6e-15
Identities = 51/197 (25%), Positives = 94/197 (47%)
Frame = +2
Query: 161 VLIEAYAKSGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMVKS 340
VL+ + KSG + A + G V Y +++ + + A Y +M++
Sbjct: 273 VLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRE 332
Query: 341 NCRPNQATYSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNTVILSGLCEARSTDDA 520
N +P+ Y+I+I G + GR +AL L +M RG+ P+ I ++ G C+ D+A
Sbjct: 333 NIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEA 392
Query: 521 LRHFYRMKESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKDGFVLDLNGYSCLIDS 700
+ + C P+ TY+ L+ G CK G +++A + EK G + + ++ LI+
Sbjct: 393 ESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLING 452
Query: 701 FFRTKRSDEAHKWYRKM 751
+ R +EA + +M
Sbjct: 453 LCKANRLEEARLLFYQM 469
Score = 82.0 bits (201), Expect = 2e-13
Identities = 50/193 (25%), Positives = 96/193 (49%), Gaps = 13/193 (6%)
Frame = +2
Query: 155 FLVLIEAYAKSGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMV 334
+ +LI K+G+ KA F +M GC P+V T+NS+++ + + L A ++ QM
Sbjct: 411 YSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQME 470
Query: 335 KSN-----CRPNQAT--------YSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNT 475
R +Q T ++++ +SG A +L ++ G+ P++ T
Sbjct: 471 IVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYN 530
Query: 476 VILSGLCEARSTDDALRHFYRMKESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKD 655
++++G C+ + + A + F M+ G PD +TY L++G + GR ++ALE+ K
Sbjct: 531 ILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKK 590
Query: 656 GFVLDLNGYSCLI 694
G V + + Y ++
Sbjct: 591 GCVPESSTYKTIM 603
>ref|XP_006848380.1| hypothetical protein AMTR_s00013p00202120 [Amborella trichopoda]
gi|548851686|gb|ERN09961.1| hypothetical protein
AMTR_s00013p00202120 [Amborella trichopoda]
Length = 789
Score = 281 bits (719), Expect = 2e-73
Identities = 138/252 (54%), Positives = 181/252 (71%)
Frame = +2
Query: 2 FYIWAIKQKGLRSSVSQNLVIDLLIKDDGFDLYWKTLEELKNCKAPIVSDAFLVLIEAYA 181
F+IW+ + L+S S N +ID L F+ WK LEELK K PI +AF V+I AY
Sbjct: 79 FFIWSSRHTALKSWDSHNSMIDKLQGMQDFESAWKLLEELKISKHPISPEAFAVMISAYT 138
Query: 182 KSGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMVKSNCRPNQA 361
K GMAEKAVE F KM F C PN FTYN+ILHL++++EV +A AVYNQM+K +CRPNQ+
Sbjct: 139 KLGMAEKAVECFSKMVEFNCRPNTFTYNTILHLLMEEEVFPVAFAVYNQMLKVDCRPNQS 198
Query: 362 TYSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNTVILSGLCEARSTDDALRHFYRM 541
T++ILI G K+G+TQDAL LFD+M R I+PN +T T+++SGLC AR T DA + M
Sbjct: 199 TFNILIGGLCKAGKTQDALLLFDEMAKRRISPNTLTYTIVISGLCNARKTKDARKLLQTM 258
Query: 542 KESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKDGFVLDLNGYSCLIDSFFRTKRS 721
+++ C PD ITYN +L+GFCKLGRVDEA ELL SF ++ ++L LNGY+ L+D FR R
Sbjct: 259 RDNRCLPDDITYNCMLSGFCKLGRVDEAFELLRSFRRENYMLGLNGYTTLLDGLFRAGRF 318
Query: 722 DEAHKWYRKMLE 757
+EA ++YR M+E
Sbjct: 319 EEACQYYRNMVE 330
Score = 105 bits (262), Expect = 2e-20
Identities = 71/261 (27%), Positives = 118/261 (45%), Gaps = 50/261 (19%)
Frame = +2
Query: 98 YWKTLEELKNCKAPIVSDAFL--VLIEAYAKSGMAEKAVESFGKMRHFGCSPNVFTYNSI 271
Y++ + E +N IV D L +I+ Y ++G A+ +M G P+ + YN++
Sbjct: 324 YYRNMVERQN----IVPDCILYTTMIKGYCEAGKINAALGFLREMTSKGLVPDTYCYNTL 379
Query: 272 LHLMLQKEVLLLAMAVYNQMVKSNCRPNQATYSILIDGSYKSGRTQDALRLFDDMMHRGI 451
+ + L A ++ ++ K +C P+ TY+ILI G K G +A +F++M G
Sbjct: 380 IKGLCDVGFLDKARSLRLEISKEDCFPDSTTYTILICGLCKEGLVNEAEEIFEEMKRLGC 439
Query: 452 APNVITNTVILSGLCEARSTDDALRHFYRMK----------------------------- 544
+P V+T +++GLC+A + + A FY+M+
Sbjct: 440 SPTVMTFNSLINGLCKAGAVEKAHILFYKMEMGSNPSLFLRLSQGSDPALDSASLQSMVE 499
Query: 545 -------------------ESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKDGFVL 667
+SG PD+ITYN L+NG CK G ++ A +LL + G+
Sbjct: 500 RLCNSGLILKAYKLLKELVKSGAVPDIITYNILINGLCKAGNINGAFKLLKELQLKGYSP 559
Query: 668 DLNGYSCLIDSFFRTKRSDEA 730
D Y+ LID R R +EA
Sbjct: 560 DAVTYTTLIDGLQRADREEEA 580
Score = 90.1 bits (222), Expect = 8e-16
Identities = 55/216 (25%), Positives = 103/216 (47%), Gaps = 13/216 (6%)
Frame = +2
Query: 146 SDAFLVLIEAYAKSGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYN 325
S + +LI K G+ +A E F +M+ GCSP V T+NS+++ + + + A ++
Sbjct: 408 STTYTILICGLCKEGLVNEAEEIFEEMKRLGCSPTVMTFNSLINGLCKAGAVEKAHILFY 467
Query: 326 QMVK-------------SNCRPNQATYSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVI 466
+M S+ + A+ +++ SG A +L +++ G P++I
Sbjct: 468 KMEMGSNPSLFLRLSQGSDPALDSASLQSMVERLCNSGLILKAYKLLKELVKSGAVPDII 527
Query: 467 TNTVILSGLCEARSTDDALRHFYRMKESGCCPDLITYNALLNGFCKLGRVDEALELLPSF 646
T ++++GLC+A + + A + ++ G PD +TY L++G + R +EA LL
Sbjct: 528 TYNILINGLCKAGNINGAFKLLKELQLKGYSPDAVTYTTLIDGLQRADREEEAFSLLDLM 587
Query: 647 EKDGFVLDLNGYSCLIDSFFRTKRSDEAHKWYRKML 754
G + D+ Y L+ S R R +A + L
Sbjct: 588 VSHGHMPDVVVYKVLMTSLCRKGRVTQAFSLWLNFL 623
Score = 74.7 bits (182), Expect = 3e-11
Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 1/200 (0%)
Frame = +2
Query: 164 LIEAYAKSGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMV-KS 340
++ + K G ++A E R + Y ++L + + A Y MV +
Sbjct: 273 MLSGFCKLGRVDEAFELLRSFRRENYMLGLNGYTTLLDGLFRAGRFEEACQYYRNMVERQ 332
Query: 341 NCRPNQATYSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNTVILSGLCEARSTDDA 520
N P+ Y+ +I G ++G+ AL +M +G+ P+ ++ GLC+ D A
Sbjct: 333 NIVPDCILYTTMIKGYCEAGKINAALGFLREMTSKGLVPDTYCYNTLIKGLCDVGFLDKA 392
Query: 521 LRHFYRMKESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKDGFVLDLNGYSCLIDS 700
+ + C PD TY L+ G CK G V+EA E+ ++ G + ++ LI+
Sbjct: 393 RSLRLEISKEDCFPDSTTYTILICGLCKEGLVNEAEEIFEEMKRLGCSPTVMTFNSLING 452
Query: 701 FFRTKRSDEAHKWYRKMLEG 760
+ ++AH + KM G
Sbjct: 453 LCKAGAVEKAHILFYKMEMG 472
>ref|XP_002308024.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550335473|gb|EEE91547.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 838
Score = 280 bits (717), Expect = 3e-73
Identities = 139/252 (55%), Positives = 178/252 (70%)
Frame = +2
Query: 2 FYIWAIKQKGLRSSVSQNLVIDLLIKDDGFDLYWKTLEELKNCKAPIVSDAFLVLIEAYA 181
F+IWA K R+ S +L+ DLLI +G +LY +TLE LKN + +DAF VLI+ Y
Sbjct: 78 FFIWASNFKRFRAWESCDLITDLLINQNGLELYCQTLEALKNGGIKVHNDAFFVLIKVYL 137
Query: 182 KSGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMVKSNCRPNQA 361
K G+ +KA+E+FG MR F C+P+V+TYN IL +++QK LLLA+ VY +M+K NC PN A
Sbjct: 138 KMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVA 197
Query: 362 TYSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNTVILSGLCEARSTDDALRHFYRM 541
T+SILIDG KSG +DAL LFD+M RGI P+ T V++SGLC ++ DDA R F +M
Sbjct: 198 TFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKM 257
Query: 542 KESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKDGFVLDLNGYSCLIDSFFRTKRS 721
K+SG PD +T NALLNGFC L RVDEA LL FEKDG+VLD+ GYSCLI FR KR
Sbjct: 258 KDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRY 317
Query: 722 DEAHKWYRKMLE 757
++ YRKM+E
Sbjct: 318 EDVQLLYRKMIE 329
Score = 101 bits (251), Expect = 3e-19
Identities = 69/267 (25%), Positives = 118/267 (44%), Gaps = 48/267 (17%)
Frame = +2
Query: 95 LYWKTLEELKNCKAPIVSDAFLVLIEAYAKSGMAEKAVESFGKMRHFGCSPNVFTYNSIL 274
LY K +E+ N K + + ++++ A++G A+E +M G P+ YN ++
Sbjct: 323 LYRKMIED--NVKPDVY--LYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLI 378
Query: 275 HLMLQKEVLLLAMAVYNQMVKSNCRPNQATYSILIDGSYKSGRTQDALRLFDDMMHRGIA 454
+L A ++ ++ + +C PN TYSILI G ++G T+DA +F++M G
Sbjct: 379 KGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCY 438
Query: 455 PNVITNTVILSGLCEARSTDDALRHFYRMK------------------------------ 544
P+ +T ++ GLC+ + A FY+M+
Sbjct: 439 PSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQ 498
Query: 545 ------------------ESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKDGFVLD 670
+SG P + TYN L+NGFCKLG + A +L + G D
Sbjct: 499 LCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPD 558
Query: 671 LNGYSCLIDSFFRTKRSDEAHKWYRKM 751
Y LI+ R +R ++A+K + +M
Sbjct: 559 TVTYGTLINGLLRFQREEDAYKVFDQM 585
Score = 89.7 bits (221), Expect = 1e-15
Identities = 58/241 (24%), Positives = 109/241 (45%), Gaps = 37/241 (15%)
Frame = +2
Query: 140 IVSDAFL--VLIEAYAKSGMAEKAVESFGKMRHFGCSPNVFTYNSILH------------ 277
I+ DAF V+I +S + A F KM+ G P+ T N++L+
Sbjct: 227 ILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAF 286
Query: 278 ---LMLQKEVLLL--------------------AMAVYNQMVKSNCRPNQATYSILIDGS 388
+ +K+ +L +Y +M++ N +P+ Y+I++ G
Sbjct: 287 SLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGL 346
Query: 389 YKSGRTQDALRLFDDMMHRGIAPNVITNTVILSGLCEARSTDDALRHFYRMKESGCCPDL 568
++G+ +DAL L ++M G+ P+ + V++ G C+ +A + C P++
Sbjct: 347 AEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNV 406
Query: 569 ITYNALLNGFCKLGRVDEALELLPSFEKDGFVLDLNGYSCLIDSFFRTKRSDEAHKWYRK 748
TY+ L++G C+ G +A E+ EK G ++ LID +T + ++AH + K
Sbjct: 407 KTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYK 466
Query: 749 M 751
M
Sbjct: 467 M 467
Score = 79.7 bits (195), Expect = 1e-12
Identities = 66/298 (22%), Positives = 117/298 (39%), Gaps = 48/298 (16%)
Frame = +2
Query: 5 YIWAIKQKGLRSSVSQNLVIDLLIKDDGFDLYWKTLEELKNCKAPIVSDAFLVLIEAYAK 184
Y++ I KGL + ++LL E+ + + VLI+ +
Sbjct: 337 YLYTIMMKGLAEAGKVRDALELL-------------NEMTESGVVPDTVCYNVLIKGFCD 383
Query: 185 SGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMVKSNCRPNQAT 364
G+ +A ++ C PNV TY+ ++ M + + A ++N+M K C P+ T
Sbjct: 384 MGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVT 443
Query: 365 YSILIDGSYKSGRTQDALRLFDDM------------------------------------ 436
++ LIDG K+G+ + A LF M
Sbjct: 444 FNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSG 503
Query: 437 -MHR-----------GIAPNVITNTVILSGLCEARSTDDALRHFYRMKESGCCPDLITYN 580
+H+ G AP + T ++++G C+ + + A + F M+ G PD +TY
Sbjct: 504 LIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYG 563
Query: 581 ALLNGFCKLGRVDEALELLPSFEKDGFVLDLNGYSCLIDSFFRTKRSDEAHKWYRKML 754
L+NG + R ++A ++ EK+G D Y ++ R A + K L
Sbjct: 564 TLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAFSLWLKYL 621
>ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 950
Score = 280 bits (716), Expect = 4e-73
Identities = 138/250 (55%), Positives = 178/250 (71%)
Frame = +2
Query: 5 YIWAIKQKGLRSSVSQNLVIDLLIKDDGFDLYWKTLEELKNCKAPIVSDAFLVLIEAYAK 184
+IW++K LR Q+L+I LIK++ F+LYWK L+ELKN I S+AF VLIEAY++
Sbjct: 81 FIWSLKSWHLRCRTVQDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSE 140
Query: 185 SGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMVKSNCRPNQAT 364
+GM EKAVESF MR F C P++F +N ILH +++KE LLA+AVYNQM+K N P+ T
Sbjct: 141 AGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVT 200
Query: 365 YSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNTVILSGLCEARSTDDALRHFYRMK 544
Y ILI G K+ +TQDAL LFD+M RGI PN I +++LSGLC+A+ DA R F +M+
Sbjct: 201 YGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMR 260
Query: 545 ESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKDGFVLDLNGYSCLIDSFFRTKRSD 724
SGC DLITYN LLNGFCK G +D+A LL KDG +L + GY CLI+ FR +R +
Sbjct: 261 ASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYE 320
Query: 725 EAHKWYRKML 754
EAH WY+KML
Sbjct: 321 EAHMWYQKML 330
Score = 105 bits (263), Expect = 1e-20
Identities = 71/268 (26%), Positives = 120/268 (44%), Gaps = 48/268 (17%)
Frame = +2
Query: 98 YWKTLEELKNCKAPIVSDAFLVLIEAYAKSGMAEKAVESFGKMRHFGCSPNVFTYNSILH 277
Y K L E N K ++ + ++I ++ G +A+ G+M G P+ YN+++
Sbjct: 326 YQKMLRE--NIKPDVM--LYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIK 381
Query: 278 LMLQKEVLLLAMAVYNQMVKSNCRPNQATYSILIDGSYKSGRTQDALRLFDDMMHRGIAP 457
L A ++ ++ K +C PN TYSILI G K+G A +F +M G P
Sbjct: 382 GFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLP 441
Query: 458 NVITNTVILSGLCEARSTDDALRHFYRMK------------------------------- 544
+V+T +++GLC+A ++A FY+M+
Sbjct: 442 SVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERL 501
Query: 545 -----------------ESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKDGFVLDL 673
+SG PD+ TYN L+NGFCK G ++ A +L + G + D
Sbjct: 502 CESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDS 561
Query: 674 NGYSCLIDSFFRTKRSDEAHKWYRKMLE 757
Y LID +R R+++A + + +M++
Sbjct: 562 VTYGTLIDGLYRAGRNEDALEIFEQMVK 589
Score = 87.0 bits (214), Expect = 6e-15
Identities = 51/197 (25%), Positives = 94/197 (47%)
Frame = +2
Query: 161 VLIEAYAKSGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMVKS 340
VL+ + KSG + A + G V Y +++ + + A Y +M++
Sbjct: 273 VLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRE 332
Query: 341 NCRPNQATYSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNTVILSGLCEARSTDDA 520
N +P+ Y+I+I G + GR +AL L +M RG+ P+ I ++ G C+ D+A
Sbjct: 333 NIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEA 392
Query: 521 LRHFYRMKESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKDGFVLDLNGYSCLIDS 700
+ + C P+ TY+ L+ G CK G +++A + EK G + + ++ LI+
Sbjct: 393 ESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLING 452
Query: 701 FFRTKRSDEAHKWYRKM 751
+ R +EA + +M
Sbjct: 453 LCKANRLEEARLLFYQM 469
Score = 82.0 bits (201), Expect = 2e-13
Identities = 50/193 (25%), Positives = 96/193 (49%), Gaps = 13/193 (6%)
Frame = +2
Query: 155 FLVLIEAYAKSGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMV 334
+ +LI K+G+ KA F +M GC P+V T+NS+++ + + L A ++ QM
Sbjct: 411 YSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQME 470
Query: 335 KSN-----CRPNQAT--------YSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNT 475
R +Q T ++++ +SG A +L ++ G+ P++ T
Sbjct: 471 IVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYN 530
Query: 476 VILSGLCEARSTDDALRHFYRMKESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKD 655
++++G C+ + + A + F M+ G PD +TY L++G + GR ++ALE+ K
Sbjct: 531 ILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKK 590
Query: 656 GFVLDLNGYSCLI 694
G V + + Y ++
Sbjct: 591 GCVPESSTYKTIM 603
>gb|EXB51207.1| hypothetical protein L484_019198 [Morus notabilis]
Length = 759
Score = 274 bits (700), Expect = 3e-71
Identities = 130/252 (51%), Positives = 177/252 (70%)
Frame = +2
Query: 2 FYIWAIKQKGLRSSVSQNLVIDLLIKDDGFDLYWKTLEELKNCKAPIVSDAFLVLIEAYA 181
F++WA LRS S+ L + +L+K D + L LK + PI SDAF I+ +
Sbjct: 43 FFLWAWNSDFLRSKASETLFLQMLLKTQNDDAFESALRHLKEHRIPIPSDAFRAAIKGFL 102
Query: 182 KSGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMVKSNCRPNQA 361
SGM EKA+E FG+MR GC P+VFTYN IL LML+K+V LA+A+YN+M++SNC P+
Sbjct: 103 GSGMPEKALEFFGRMRDLGCKPDVFTYNVILCLMLRKQVFSLALALYNEMLESNCTPDLV 162
Query: 362 TYSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNTVILSGLCEARSTDDALRHFYRM 541
T++ILI G KSG+ QDA ++FD+M RG+AP+ T T+I+SGLC+A+ D+A R M
Sbjct: 163 TFNILIHGFCKSGQIQDAQKMFDEMAERGLAPDERTYTIIISGLCQAKRVDEARRLLITM 222
Query: 542 KESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKDGFVLDLNGYSCLIDSFFRTKRS 721
+ESGCCPD + YNALLNG+C+LGR+DEA + EK+G+V+ L GYSCLID F+ KR
Sbjct: 223 EESGCCPDTVAYNALLNGYCQLGRIDEAYAFMRWSEKEGYVVGLKGYSCLIDGLFKAKRY 282
Query: 722 DEAHKWYRKMLE 757
EAH W+RKM++
Sbjct: 283 VEAHGWFRKMIK 294
Score = 95.1 bits (235), Expect = 2e-17
Identities = 65/262 (24%), Positives = 115/262 (43%), Gaps = 50/262 (19%)
Frame = +2
Query: 122 KNCKAPIVSDAFL--VLIEAYAKSGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKE 295
K KA + D ++I + G E A+ M G P+ + Y++++
Sbjct: 291 KMIKAGVKPDVVFYGIMIRGLSDGGRVEDALNMLNGMSREGLVPDAYCYSAVIKGFCDVG 350
Query: 296 VLLLAMAVYNQMVKSNCRPNQATYSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNT 475
+L A +++ ++ +C PN TY+ILI G ++G ++A ++F++M G P+V+T
Sbjct: 351 LLDEARSLHLEISNRDCFPNACTYTILICGMCRNGLVKEAQQIFEEMDKVGCFPSVVTFN 410
Query: 476 VILSGLCEARSTDDALRHFYRMK------------------------------------- 544
++ GLC+A A FYRM+
Sbjct: 411 SLIHGLCKAGELGKAHLLFYRMEIGRNPSLFLRLSQGGGRVLDGGSLQAVVEKLCESGLV 470
Query: 545 -----------ESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKDGFVLDLNGYSCL 691
+SG PD +TYN+L+NGFCK G ++ AL+L + G D ++ L
Sbjct: 471 LKAYRILTQLADSGVMPDTVTYNSLINGFCKAGNINGALKLFKDMQLKGPSPDSVTHATL 530
Query: 692 IDSFFRTKRSDEAHKWYRKMLE 757
ID R + ++A + +M++
Sbjct: 531 IDGLQRADKEEDAFAVFDQMVK 552
Score = 81.6 bits (200), Expect = 3e-13
Identities = 49/215 (22%), Positives = 95/215 (44%)
Frame = +2
Query: 107 TLEELKNCKAPIVSDAFLVLIEAYAKSGMAEKAVESFGKMRHFGCSPNVFTYNSILHLML 286
T+EE C + A+ L+ Y + G ++A G + Y+ ++ +
Sbjct: 221 TMEESGCCPDTV---AYNALLNGYCQLGRIDEAYAFMRWSEKEGYVVGLKGYSCLIDGLF 277
Query: 287 QKEVLLLAMAVYNQMVKSNCRPNQATYSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVI 466
+ + + A + +M+K+ +P+ Y I+I G GR +DAL + + M G+ P+
Sbjct: 278 KAKRYVEAHGWFRKMIKAGVKPDVVFYGIMIRGLSDGGRVEDALNMLNGMSREGLVPDAY 337
Query: 467 TNTVILSGLCEARSTDDALRHFYRMKESGCCPDLITYNALLNGFCKLGRVDEALELLPSF 646
+ ++ G C+ D+A + C P+ TY L+ G C+ G V EA ++
Sbjct: 338 CYSAVIKGFCDVGLLDEARSLHLEISNRDCFPNACTYTILICGMCRNGLVKEAQQIFEEM 397
Query: 647 EKDGFVLDLNGYSCLIDSFFRTKRSDEAHKWYRKM 751
+K G + ++ LI + +AH + +M
Sbjct: 398 DKVGCFPSVVTFNSLIHGLCKAGELGKAHLLFYRM 432
Score = 76.6 bits (187), Expect = 9e-12
Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 48/208 (23%)
Frame = +2
Query: 155 FLVLIEAYAKSGMAEKAVESFGKMRHFGCSPNVFTYNSILH------------------- 277
+ +LI ++G+ ++A + F +M GC P+V T+NS++H
Sbjct: 374 YTILICGMCRNGLVKEAQQIFEEMDKVGCFPSVVTFNSLIHGLCKAGELGKAHLLFYRME 433
Query: 278 -----------------------------LMLQKEVLLLAMAVYNQMVKSNCRPNQATYS 370
+ + ++L A + Q+ S P+ TY+
Sbjct: 434 IGRNPSLFLRLSQGGGRVLDGGSLQAVVEKLCESGLVLKAYRILTQLADSGVMPDTVTYN 493
Query: 371 ILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNTVILSGLCEARSTDDALRHFYRMKES 550
LI+G K+G AL+LF DM +G +P+ +T+ ++ GL A +DA F +M ++
Sbjct: 494 SLINGFCKAGNINGALKLFKDMQLKGPSPDSVTHATLIDGLQRADKEEDAFAVFDQMVKN 553
Query: 551 GCCPDLITYNALLNGFCKLGRVDEALEL 634
GC P Y L+ + G+ A L
Sbjct: 554 GCVPSSSVYITLMTWSSRRGKHSLAFSL 581
>ref|XP_004295543.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g79540-like [Fragaria vesca subsp. vesca]
Length = 768
Score = 267 bits (682), Expect = 3e-69
Identities = 127/251 (50%), Positives = 186/251 (74%), Gaps = 1/251 (0%)
Frame = +2
Query: 5 YIWAIKQKGLRSSVSQNLVIDLLIKDDG-FDLYWKTLEELKNCKAPIVSDAFLVLIEAYA 181
+IWA ++ + + + ++D+L+KDD FD+YW T++EL++C I AF VLI Y
Sbjct: 66 FIWATQRSKVCTRTCHSAIVDMLVKDDKRFDIYWSTMQELRDCGVGIGCGAFSVLIRGYE 125
Query: 182 KSGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMVKSNCRPNQA 361
+ G AEKAVE+F KM F C P+V+TYN++L++M++KEV LLA+AVYNQM+K N P ++
Sbjct: 126 RLGNAEKAVEAFVKMEEFDCKPDVYTYNAVLYVMVRKEVFLLALAVYNQMLKCNLSPTRS 185
Query: 362 TYSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNTVILSGLCEARSTDDALRHFYRM 541
TYSILI+G K+ +TQDAL++FD+M RGIAP+ +T T+I+SGLC+A+ +A R +M
Sbjct: 186 TYSILINGFCKTRKTQDALQMFDEMAQRGIAPDTVTYTIIVSGLCQAKRAHEAHRLVDKM 245
Query: 542 KESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKDGFVLDLNGYSCLIDSFFRTKRS 721
+E+GC P+++TY+ALL+G+CKLGR+DEA L+ SF++ G+VL + GYS LI FR +R
Sbjct: 246 RETGCVPNIVTYHALLDGYCKLGRLDEAYALVRSFQRIGYVLGVEGYSSLIFGLFRARRF 305
Query: 722 DEAHKWYRKML 754
DEA Y K+L
Sbjct: 306 DEALGLYGKLL 316
Score = 109 bits (272), Expect = 1e-21
Identities = 75/276 (27%), Positives = 122/276 (44%), Gaps = 50/276 (18%)
Frame = +2
Query: 80 DDGFDLYWKTLEELKNCKAPIVSDAFL--VLIEAYAKSGMAEKAVESFGKMRHFGCSPNV 253
D+ LY K L E I D L +LI+ + +G + A+ G+M G P+
Sbjct: 306 DEALGLYGKLLGE------GIEPDVILCTILIKGLSDAGRVKDALXFLGEMSKKGLVPDA 359
Query: 254 FTYNSILHLMLQKEVLLLAMAVYNQMVKSNCRPNQATYSILIDGSYKSGRTQDALRLFDD 433
+ YN+++ +L A +++ ++ K +C PN TY+ILI G ++G +A ++F++
Sbjct: 360 YCYNAVIKGFCDLGLLDEARSLHLEISKQDCFPNACTYTILICGMCRNGLVGEAEQIFNE 419
Query: 434 MMHRGIAPNVITNTVILSGLCEARSTDDALRHFYRMK----------------------- 544
M G P V+T ++ GLC+A DA FY+M+
Sbjct: 420 MEKLGCVPCVVTFNALIDGLCKASKLKDAHMLFYKMEIGRKPSLFLRLSQGSDRIIDSAS 479
Query: 545 -------------------------ESGCCPDLITYNALLNGFCKLGRVDEALELLPSFE 649
SG PD+ITYN L++GFCK G +D A +L +
Sbjct: 480 LQKKVEQLCDSGLILQAYKLLIQLASSGVAPDIITYNTLIDGFCKSGNMDGAFKLFKDMQ 539
Query: 650 KDGFVLDLNGYSCLIDSFFRTKRSDEAHKWYRKMLE 757
G D Y LID R +R ++A + +M++
Sbjct: 540 LKGITPDSVTYGTLIDGLQRAEREEDAFLVFNQMVK 575
Score = 100 bits (249), Expect = 6e-19
Identities = 69/268 (25%), Positives = 114/268 (42%), Gaps = 35/268 (13%)
Frame = +2
Query: 53 NLVIDLLIKDDGFDLYWKTLEELKNCKAPIVSDAFLVLIEAYAKSGMAEKAVESFGKMRH 232
N V+ ++++ + F L ++ C + +LI + K+ + A++ F +M
Sbjct: 153 NAVLYVMVRKEVFLLALAVYNQMLKCNLSPTRSTYSILINGFCKTRKTQDALQMFDEMAQ 212
Query: 233 FGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMVKSNCRPNQATYSILIDGSYKSGRT-- 406
G +P+ TY I+ + Q + A + ++M ++ C PN TY L+DG K GR
Sbjct: 213 RGIAPDTVTYTIIVSGLCQAKRAHEAHRLVDKMRETGCVPNIVTYHALLDGYCKLGRLDE 272
Query: 407 ---------------------------------QDALRLFDDMMHRGIAPNVITNTVILS 487
+AL L+ ++ GI P+VI T+++
Sbjct: 273 AYALVRSFQRIGYVLGVEGYSSLIFGLFRARRFDEALGLYGKLLGEGIEPDVILCTILIK 332
Query: 488 GLCEARSTDDALRHFYRMKESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKDGFVL 667
GL +A DAL M + G PD YNA++ GFC LG +DEA L K
Sbjct: 333 GLSDAGRVKDALXFLGEMSKKGLVPDAYCYNAVIKGFCDLGLLDEARSLHLEISKQDCFP 392
Query: 668 DLNGYSCLIDSFFRTKRSDEAHKWYRKM 751
+ Y+ LI R EA + + +M
Sbjct: 393 NACTYTILICGMCRNGLVGEAEQIFNEM 420
Score = 88.6 bits (218), Expect = 2e-15
Identities = 50/196 (25%), Positives = 91/196 (46%)
Frame = +2
Query: 164 LIEAYAKSGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMVKSN 343
L++ Y K G ++A + G V Y+S++ + + A+ +Y +++
Sbjct: 260 LLDGYCKLGRLDEAYALVRSFQRIGYVLGVEGYSSLIFGLFRARRFDEALGLYGKLLGEG 319
Query: 344 CRPNQATYSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNTVILSGLCEARSTDDAL 523
P+ +ILI G +GR +DAL +M +G+ P+ ++ G C+ D+A
Sbjct: 320 IEPDVILCTILIKGLSDAGRVKDALXFLGEMSKKGLVPDAYCYNAVIKGFCDLGLLDEAR 379
Query: 524 RHFYRMKESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKDGFVLDLNGYSCLIDSF 703
+ + C P+ TY L+ G C+ G V EA ++ EK G V + ++ LID
Sbjct: 380 SLHLEISKQDCFPNACTYTILICGMCRNGLVGEAEQIFNEMEKLGCVPCVVTFNALIDGL 439
Query: 704 FRTKRSDEAHKWYRKM 751
+ + +AH + KM
Sbjct: 440 CKASKLKDAHMLFYKM 455
Score = 77.0 bits (188), Expect = 7e-12
Identities = 68/284 (23%), Positives = 114/284 (40%), Gaps = 83/284 (29%)
Frame = +2
Query: 155 FLVLIEAYAKSGMAEKAVESFGKMRHFGCSPNVFTYNSIL------------HLM----- 283
+ +LI ++G+ +A + F +M GC P V T+N+++ H++
Sbjct: 397 YTILICGMCRNGLVGEAEQIFNEMEKLGCVPCVVTFNALIDGLCKASKLKDAHMLFYKME 456
Query: 284 -----------------------LQKEV--------LLLAMAVYNQMVKSNCRPNQATYS 370
LQK+V +L A + Q+ S P+ TY+
Sbjct: 457 IGRKPSLFLRLSQGSDRIIDSASLQKKVEQLCDSGLILQAYKLLIQLASSGVAPDIITYN 516
Query: 371 ILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNTVILSGLCEARSTDDALRHFYRMKES 550
LIDG KSG A +LF DM +GI P+ +T ++ GL A +DA F +M ++
Sbjct: 517 TLIDGFCKSGNMDGAFKLFKDMQLKGITPDSVTYGTLIDGLQRAEREEDAFLVFNQMVKN 576
Query: 551 GCCP-----------------------------------DLITYNALLNGFCKLGRVDEA 625
GC P D +T A+ F K G++++A
Sbjct: 577 GCTPSAEVYKSLMTWSSRNRKVTLSLSLWLKYLRSLPNRDEVTIEAIEKNF-KEGQIEKA 635
Query: 626 LELLPSFEKDGFVLDLNGYSCLIDSFFRTKRSDEAHKWYRKMLE 757
++ L + LDL Y+ L+ + +R DEA + + + E
Sbjct: 636 IQGLLEMDVQFKNLDLGPYTILLIGLCQVQRVDEALRMFSVLQE 679
Score = 63.9 bits (154), Expect = 6e-08
Identities = 55/200 (27%), Positives = 93/200 (46%), Gaps = 2/200 (1%)
Frame = +2
Query: 164 LIEAYAKSGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMVKSN 343
LI+ + KSG + A + F M+ G +P+ TY +++ + + E A V+NQMVK+
Sbjct: 518 LIDGFCKSGNMDGAFKLFKDMQLKGITPDSVTYGTLIDGLQRAEREEDAFLVFNQMVKNG 577
Query: 344 CRPNQATYSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNTVILSGLCEARSTDDAL 523
C P+ Y L+ S ++ + +L L+ + + +T I E + + A+
Sbjct: 578 CTPSAEVYKSLMTWSSRNRKVTLSLSLWLKYLRSLPNRDEVTIEAIEKNFKEGQ-IEKAI 636
Query: 524 RHFYRMKESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKDGFVLDLNGYSC--LID 697
+ M DL Y LL G C++ RVDEAL + ++ + +++ SC LID
Sbjct: 637 QGLLEMDVQFKNLDLGPYTILLIGLCQVQRVDEALRMFSVLQE--YKVNITPPSCVHLID 694
Query: 698 SFFRTKRSDEAHKWYRKMLE 757
R D A + LE
Sbjct: 695 GLCREGNLDLAINIFHYTLE 714
Score = 63.2 bits (152), Expect = 1e-07
Identities = 37/131 (28%), Positives = 61/131 (46%)
Frame = +2
Query: 365 YSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNTVILSGLCEARSTDDALRHFYRMK 544
+S+LI G + G + A+ F M P+V T +L + AL + +M
Sbjct: 117 FSVLIRGYERLGNAEKAVEAFVKMEEFDCKPDVYTYNAVLYVMVRKEVFLLALAVYNQML 176
Query: 545 ESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKDGFVLDLNGYSCLIDSFFRTKRSD 724
+ P TY+ L+NGFCK + +AL++ + G D Y+ ++ + KR+
Sbjct: 177 KCNLSPTRSTYSILINGFCKTRKTQDALQMFDEMAQRGIAPDTVTYTIIVSGLCQAKRAH 236
Query: 725 EAHKWYRKMLE 757
EAH+ KM E
Sbjct: 237 EAHRLVDKMRE 247
>ref|XP_006845840.1| hypothetical protein AMTR_s00154p00028890 [Amborella trichopoda]
gi|548848484|gb|ERN07515.1| hypothetical protein
AMTR_s00154p00028890 [Amborella trichopoda]
Length = 185
Score = 215 bits (548), Expect = 1e-53
Identities = 100/189 (52%), Positives = 142/189 (75%)
Frame = +2
Query: 164 LIEAYAKSGMAEKAVESFGKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMVKSN 343
+I AY K GMAE AVE F KM F C PN FTYN+ILH++++++V +A+AVYNQM+K +
Sbjct: 1 MISAYMKLGMAENAVECFSKMDEFNCWPNTFTYNTILHVLMEEDVFQVALAVYNQMLKVD 60
Query: 344 CRPNQATYSILIDGSYKSGRTQDALRLFDDMMHRGIAPNVITNTVILSGLCEARSTDDAL 523
CRPNQ+T+++LI G ++G+TQDA LFD+M RGI+PN +T V++SGLC+ DA
Sbjct: 61 CRPNQSTFNVLISGLCRAGKTQDAFLLFDEMEERGISPNTMTYAVVISGLCK-----DAH 115
Query: 524 RHFYRMKESGCCPDLITYNALLNGFCKLGRVDEALELLPSFEKDGFVLDLNGYSCLIDSF 703
+ + M+++ C PD ITYN +L+GFCKLG+VDEA ELL SF ++ ++L LNGY+ L++
Sbjct: 116 KLLHTMRDNRCIPDDITYNCMLSGFCKLGKVDEAFELLRSFRRENYMLGLNGYTTLLNGL 175
Query: 704 FRTKRSDEA 730
FR +R +EA
Sbjct: 176 FRARRFEEA 184
Score = 56.6 bits (135), Expect = 9e-06
Identities = 37/161 (22%), Positives = 70/161 (43%)
Frame = +2
Query: 38 SSVSQNLVIDLLIKDDGFDLYWKTLEELKNCKAPIVSDAFLVLIEAYAKSGMAEKAVESF 217
++ + N ++ +L+++D F + ++ F VLI ++G + A F
Sbjct: 29 NTFTYNTILHVLMEEDVFQVALAVYNQMLKVDCRPNQSTFNVLISGLCRAGKTQDAFLLF 88
Query: 218 GKMRHFGCSPNVFTYNSILHLMLQKEVLLLAMAVYNQMVKSNCRPNQATYSILIDGSYKS 397
+M G SPN TY ++ + + LL + M + C P+ TY+ ++ G K
Sbjct: 89 DEMEERGISPNTMTYAVVISGLCKDAHKLL-----HTMRDNRCIPDDITYNCMLSGFCKL 143
Query: 398 GRTQDALRLFDDMMHRGIAPNVITNTVILSGLCEARSTDDA 520
G+ +A L + T +L+GL AR ++A
Sbjct: 144 GKVDEAFELLRSFRRENYMLGLNGYTTLLNGLFRARRFEEA 184