BLASTX nr result
ID: Paeonia23_contig00021933
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia23_contig00021933
(650 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] 42 2e-07
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta... 40 1e-06
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal... 41 2e-06
dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis ... 40 3e-06
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298... 40 5e-06
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 40 7e-06
>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
Length = 740
Score = 41.6 bits (96), Expect(3) = 2e-07
Identities = 30/132 (22%), Positives = 57/132 (43%), Gaps = 6/132 (4%)
Frame = +1
Query: 1 NLDKSMCFTVGISDVCKSNFLSLMDFGEGKLLIRYXXXXXXXXXXXXKDCRPIWDRI--- 171
+L+KS + G+S++ ++N LS F G+L +RY D P+ D++
Sbjct: 310 SLEKSTLYLAGVSELNRNNILSAFPFASGQLPVRYLGLPLLTKQMTTADYSPLLDKVRSK 369
Query: 172 VPGSTLGAIGYCSSLGAFS*SNRFSLVSRFLV*CFLTS*ACLEDIFR---NFPWKGSDML 342
+ T ++ Y L ++ +S F + + C+++I + F W G ++
Sbjct: 370 ISSWTARSLSYAGRLALI--NSVIVSLSNFWMSAYRLPAGCIKEIEKLCSAFLWSGPELN 427
Query: 343 KGGNKIARASFC 378
KI S C
Sbjct: 428 PKKAKITWTSLC 439
Score = 38.1 bits (87), Expect(3) = 2e-07
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +2
Query: 395 GLGFKRLEDWSLASIG*HIWRIVSKADSVWVRWIW 499
GLG K L + + S IWR+VS+ S+WV W+W
Sbjct: 446 GLGIKSLLEANKVSCLKLIWRLVSRQSSLWVNWVW 480
Score = 20.8 bits (42), Expect(3) = 2e-07
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +3
Query: 534 WYWWKILKFR 563
W W K+LK+R
Sbjct: 501 WMWKKLLKYR 510
>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1352
Score = 40.0 bits (92), Expect(2) = 1e-06
Identities = 35/130 (26%), Positives = 53/130 (40%), Gaps = 4/130 (3%)
Frame = +1
Query: 1 NLDKSMCFTVGISDVCKSNFLSLMDFGEGKLLIRYXXXXXXXXXXXXKDCRPIWDRIVPG 180
+L+KS F GIS K++ L F G L ++Y D P+ ++I
Sbjct: 884 SLEKSTIFMAGISPNAKTSILQQFPFELGTLPVKYLGLPLLTKRMTQSDYLPLVEKIRAR 943
Query: 181 STLGAIGYCSSLGAFS-*SNRFSLVSRFLV*CFLTS*ACLEDI---FRNFPWKGSDMLKG 348
T + S G + S ++ F + F ACL++I F F W G D+
Sbjct: 944 ITSWTNRFLSFAGRLQLIKSVLSSITNFWLSVFRLPKACLQEIEKMFSAFLWSGPDLNTK 1003
Query: 349 GNKIARASFC 378
KIA + C
Sbjct: 1004 KAKIAWSEVC 1013
Score = 38.5 bits (88), Expect(2) = 1e-06
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 10/52 (19%)
Frame = +2
Query: 395 GLGFKRLEDWSLASIG*HIWRIVSKADSVWVRWI----------WEVRLNFG 520
GLG K L++ + S+ IWRI+S DS+WV+W+ W V+ N G
Sbjct: 1020 GLGLKPLKEANEVSLLKLIWRILSARDSLWVKWVNKHLIRKETFWSVKENTG 1071
>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
Length = 629
Score = 40.8 bits (94), Expect(3) = 2e-06
Identities = 34/138 (24%), Positives = 58/138 (42%), Gaps = 10/138 (7%)
Frame = +1
Query: 1 NLDKSMCFTVGISDVCKSNFLSLMDFGEGKLLIRYXXXXXXXXXXXXKDCRPIWDRIVPG 180
N++K+ +T G+SD + +S FG G+L +RY +D P++++I
Sbjct: 142 NMEKTTLYTAGVSDHNRYMMISRYPFGLGQLPVRYLGLPLVTKRLTKEDLSPLFEQIRNR 201
Query: 181 STLGAIGYCSSLGAFS*SNRFSLVS-------RFLV*CFLTS*ACLED---IFRNFPWKG 330
Y S G R +L+S F + F ACL++ I F W G
Sbjct: 202 IGTWTSRYLSFAG------RLNLISSVLWSTMNFWMSAFRLPSACLKEINSICSAFLWSG 255
Query: 331 SDMLKGGNKIARASFCNP 384
++ + K++ C P
Sbjct: 256 PELHRRKAKVSWDDICKP 273
Score = 35.8 bits (81), Expect(3) = 2e-06
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +2
Query: 395 GLGFKRLEDWSLASIG*HIWRIVSKADSVWVRW 493
GLG + L + ++ S+ IWR+ S DS+WV+W
Sbjct: 278 GLGLRSLTEANVVSVLKLIWRVTSNDDSLWVKW 310
Score = 20.4 bits (41), Expect(3) = 2e-06
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +3
Query: 534 WYWWKILKFR 563
W W K+LK+R
Sbjct: 333 WMWKKMLKYR 342
>dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis thaliana]
Length = 1115
Score = 40.4 bits (93), Expect(3) = 3e-06
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 10/141 (7%)
Frame = +1
Query: 1 NLDKSMCFTVGISDVCKSNFLSLMDFGEGKLLIRYXXXXXXXXXXXXKDCRPIWDRIVPG 180
N++K+ +T G+SD + +S FG +L +RY +D P++++I
Sbjct: 654 NMEKTTLYTAGVSDHNRHMMISRYPFGLAQLPVRYLGLPLVTKRLTKEDLSPLFEQIRNR 713
Query: 181 STLGAIGYCSSLGAFS*SNRFSLVS-------RFLV*CFLTS*ACLED---IFRNFPWKG 330
Y S G R +L+S F + F ACL++ I F W G
Sbjct: 714 IGTWTSRYLSFAG------RLNLISSVLWSTMNFWMSAFRLPSACLKEINSICSAFLWSG 767
Query: 331 SDMLKGGNKIARASFCNPLDG 393
++ + K++ C P G
Sbjct: 768 PELNRRKAKVSWDDICKPKQG 788
Score = 35.8 bits (81), Expect(3) = 3e-06
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +2
Query: 395 GLGFKRLEDWSLASIG*HIWRIVSKADSVWVRW 493
GLG + L + ++ S+ IWR+ S DS+WV+W
Sbjct: 789 GLGLRSLTEANVVSVLKLIWRVTSNDDSLWVKW 821
Score = 20.4 bits (41), Expect(3) = 3e-06
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +3
Query: 534 WYWWKILKFR 563
W W K+LK+R
Sbjct: 844 WMWKKMLKYR 853
>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
subsp. vesca]
Length = 958
Score = 40.0 bits (92), Expect(2) = 5e-06
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = +3
Query: 177 RIHSWCNRLLFFAGRLQLIKSVLFGIQV 260
RI SW N++L FAGRLQLI+SVL IQV
Sbjct: 618 RIKSWENKVLSFAGRLQLIQSVLSSIQV 645
Score = 36.6 bits (83), Expect(2) = 5e-06
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 9/88 (10%)
Frame = +2
Query: 260 FWSSAFLLPKRVWRTFFGISRGKVLIC*RGVIRSLGLLFVTL-WMD--------GLGFKR 412
+W+S +LPK+V + K L C G + W + GLG K
Sbjct: 646 YWASHLILPKKVLKDI-----EKRLRCFLWAGNCSGRAATKVAWSEICLPKCEGGLGIKD 700
Query: 413 LEDWSLASIG*HIWRIVSKADSVWVRWI 496
L W+ A + HIW +VS + + W W+
Sbjct: 701 LHCWNKALMISHIWNLVSSSSNFWTDWV 728
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 39.7 bits (91), Expect(2) = 7e-06
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +3
Query: 171 SARIHSWCNRLLFFAGRLQLIKSVLFG 251
+AR SW N+ L FAGR+QLI SV+FG
Sbjct: 787 TARFRSWVNKCLSFAGRIQLISSVIFG 813
Score = 36.6 bits (83), Expect(2) = 7e-06
Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Frame = +2
Query: 260 FWSSAFLLPKRVWRTFFGISR-----GKVLIC*RGVIRSLGLLFVTLWMDGLGFKRLEDW 424
FW S FLLPK + + G + +G+ S L + GLG +RL +W
Sbjct: 817 FWMSTFLLPKGCIKRIESLCSRFLWSGNIEQA-KGIKVSWAALCLPKSEGGLGLRRLLEW 875
Query: 425 SLASIG*HIWRIVSKADSVWVRW 493
+ IWR+ DS+W W
Sbjct: 876 NKTLSMRLIWRLFVAKDSLWADW 898