BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00020005
         (406 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM74314.2|AC114474_6 Putative retroelement [Oryza sativa Jap...    62   1e-07
gb|AAM01095.1|AC092748_33 Putative retroelement [Oryza sativa Ja...    62   1e-07
gb|AEJ07934.1| Xilon1 gag-pol polyprotein [Zea mays subsp. mexic...    61   2e-07
ref|XP_003598857.1| GRAS family transcription factor [Medicago t...    60   4e-07
emb|CAH67940.1| H0211F06-OSIGBa0153M17.12 [Oryza sativa Indica G...    60   4e-07
ref|XP_003635931.1| Cellular nucleic acid-binding protein [Medic...    59   9e-07
gb|ABD28293.1| RNA-directed DNA polymerase (Reverse transcriptas...    58   1e-06
ref|XP_003605752.1| Pol polyprotein [Medicago truncatula] gi|355...    58   2e-06
ref|XP_007028160.1| Uncharacterized protein TCM_023639 [Theobrom...    56   5e-06
emb|CAE04771.3| OSJNBa0079C19.12 [Oryza sativa Japonica Group]         56   6e-06

>gb|AAM74314.2|AC114474_6 Putative retroelement [Oryza sativa Japonica Group]
           gi|78708436|gb|ABB47411.1| retrotransposon protein,
           putative, Ty3-gypsy subclass [Oryza sativa Japonica
           Group]
          Length = 1223

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 41/125 (32%), Positives = 57/125 (45%), Gaps = 10/125 (8%)
 Frame = +1

Query: 25  QEEYEALIQGSMSVADYYHKFEDLSYYAPYD--TKRSRIERFKRGLNPPIQHKVGHMRFN 198
           + E+ AL QGS SV +Y H F  L+ YAP D  T   R E+F  GLN  + + +  M + 
Sbjct: 223 KREFRALNQGSCSVIEYLHDFNRLARYAPEDVRTDEERQEKFLEGLNDELSYALMAMEYR 282

Query: 199 TLMQAVESASMAEQVNYRLQTEDRH----KGKKDNDGKSSTRKFSGH----CRNCGKRGH 354
              Q V+ A   E    R++ + R     K ++        RK  G     C NCG  GH
Sbjct: 283 DFQQLVDKAIRQEDKYNRMEQKKRRAAHFKAQQAPTQNQPVRKEQGSKPGVCFNCGHPGH 342

Query: 355 KYAEC 369
              +C
Sbjct: 343 YADKC 347


>gb|AAM01095.1|AC092748_33 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1240

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 41/125 (32%), Positives = 57/125 (45%), Gaps = 10/125 (8%)
 Frame = +1

Query: 25  QEEYEALIQGSMSVADYYHKFEDLSYYAPYD--TKRSRIERFKRGLNPPIQHKVGHMRFN 198
           + E+ AL QGS SV +Y H F  L+ YAP D  T   R E+F  GLN  + + +  M + 
Sbjct: 223 KREFRALNQGSCSVIEYLHDFNRLARYAPEDVRTDEERQEKFLEGLNDELSYALMAMEYR 282

Query: 199 TLMQAVESASMAEQVNYRLQTEDRH----KGKKDNDGKSSTRKFSGH----CRNCGKRGH 354
              Q V+ A   E    R++ + R     K ++        RK  G     C NCG  GH
Sbjct: 283 DFQQLVDKAIRQEDKYNRMEQKKRRAAHFKAQQAPTQNQPVRKEQGSKPGVCFNCGHPGH 342

Query: 355 KYAEC 369
              +C
Sbjct: 343 YADKC 347


>gb|AEJ07934.1| Xilon1 gag-pol polyprotein [Zea mays subsp. mexicana]
          Length = 1604

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 42/104 (40%), Positives = 58/104 (55%), Gaps = 3/104 (2%)
 Frame = +1

Query: 25  QEEYEALIQGSMSVADYYHKFEDLSYYAPYD--TKRSRIERFKRGLNPPIQHKVGHMRFN 198
           +EE+ AL QGS SV++Y  +F  LS YAP D  T   R  RF RGL  P+Q+++ +  F 
Sbjct: 253 KEEFLALKQGSSSVSEYRDRFLQLSRYAPEDVNTDAKRQYRFLRGLVDPLQYQLMNHTFP 312

Query: 199 TLMQAVESASMAEQVNYRLQTEDR-HKGKKDNDGKSSTRKFSGH 327
           T    ++ A M E+   R + EDR  K      G SS  +FSG+
Sbjct: 313 TFQHLIDRAIMTER--KRKEMEDRKRKISGPQPGSSSRPRFSGN 354


>ref|XP_003598857.1| GRAS family transcription factor [Medicago truncatula]
           gi|355487905|gb|AES69108.1| GRAS family transcription
           factor [Medicago truncatula]
          Length = 351

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 25/148 (16%)
 Frame = +1

Query: 1   PEFAKLRMQEEYEALIQGSMSVADYYHKFEDLSYYAPYDTKR----SRIERFKRGLNPPI 168
           PE  + + + E+  L QG+MSV +Y  KF +LS + P+ T      SR  +F+ GL P I
Sbjct: 123 PEDVRGKKEIEFLELKQGNMSVTEYAAKFVELSKFYPHYTAENAEFSRCIKFENGLRPDI 182

Query: 169 QHKVGHMRFNTLMQAVESASMAEQ---VNYRLQTEDRHKGKKDNDGKSSTRKFSGH---- 327
           +  +G+ +       V S  + E+    +Y++  E + KG++      S     G     
Sbjct: 183 KRAIGYQQLRVFPDLVNSCRIYEEDTKAHYKVVNERKGKGQQSRPKPYSAPADKGKQKMV 242

Query: 328 --------------CRNCGKRGHKYAEC 369
                         C NCG++GHK   C
Sbjct: 243 DVRRPKKKDAAEIVCFNCGEKGHKSNAC 270


>emb|CAH67940.1| H0211F06-OSIGBa0153M17.12 [Oryza sativa Indica Group]
          Length = 1390

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 42/127 (33%), Positives = 58/127 (45%), Gaps = 12/127 (9%)
 Frame = +1

Query: 25  QEEYEALIQGSMSVADYYHKFEDLSYYAPYD--TKRSRIERFKRGLNPPIQHKVGHMRFN 198
           + E+ AL QGS SV +Y H F  L+ YAP D  T   R E+F  GLN  + + +    F 
Sbjct: 434 KREFRALNQGSRSVTEYLHDFNRLARYAPEDVRTDEERQEKFLEGLNDELSYALMSTDFR 493

Query: 199 TLMQAVESASMAEQVNYRLQTEDRH----KGKKDNDGKSS--TRKFSGH----CRNCGKR 348
              Q V+ A   E    R++ + R     K ++D     +   RK  G     C NCG  
Sbjct: 494 DFQQLVDKAIRQEDKYNRMEQKKRRAAQFKAQQDTTPAQNQPVRKEQGSKPGVCFNCGDP 553

Query: 349 GHKYAEC 369
           GH   +C
Sbjct: 554 GHYADKC 560


>ref|XP_003635931.1| Cellular nucleic acid-binding protein [Medicago truncatula]
           gi|355501866|gb|AES83069.1| Cellular nucleic
           acid-binding protein [Medicago truncatula]
          Length = 558

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 23/146 (15%)
 Frame = +1

Query: 1   PEFAKLRMQEEYEALIQGSMSVADYYHKFEDLS-YYAPYDTKRSRIERFKRGLNPPIQHK 177
           PE  + + + E+  L QG MSV +Y  KF +L+ +Y  Y  + S+  +FK GL   I+  
Sbjct: 165 PEDVRGKKEIEFLELKQGDMSVTEYVAKFVELAKFYPHYTAEFSKCIKFKNGLRADIKRA 224

Query: 178 VGHMRFNTLMQAVESASMAEQ---VNYRLQTEDRHKGKKD----------------NDGK 300
           +G+ +       V S  + E+    +Y++ +E R KG++                 ND +
Sbjct: 225 IGYQKIRNFYDLVSSCRIYEEDTKAHYKVMSERRGKGQQSRPKPYSAPANKVKQRLNDER 284

Query: 301 SSTRKFSGH---CRNCGKRGHKYAEC 369
              R+ +     C  CG++GHK   C
Sbjct: 285 RPRRRDAPTEIVCFKCGEKGHKSNVC 310


>gb|ABD28293.1| RNA-directed DNA polymerase (Reverse transcriptase); Zinc finger,
           CCHC-type; Peptidase aspartic, active site;
           Retrotransposon gag protein [Medicago truncatula]
          Length = 912

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
 Frame = +1

Query: 1   PEFAKLRMQEEYEALIQGSMSVADYYHKFEDLSYYAPYDTKR----SRIERFKRGLNPPI 168
           PE  + + + E+  L QG+MSV +Y  KF +LS + P+ T      SR  +F+ GL P I
Sbjct: 112 PEDVRGKKEIEFLELKQGNMSVTEYAAKFVELSKFYPHYTAENAEFSRCIKFENGLRPDI 171

Query: 169 QHKVGHMRFNTLMQAVESASMAEQ---VNYRLQTEDRHKGKKDNDGKSSTRKFSGH---- 327
           +  +G+ +       V S  + E+    +Y++  E   KG++      S     G     
Sbjct: 172 KRAIGYQQLRVFQDLVNSCRIYEENTKAHYKVVNERNGKGQQSRPKPYSAPADKGKQKMV 231

Query: 328 --------------CRNCGKRGHK 357
                         C NCG++GHK
Sbjct: 232 DVRRPKKKDAVEIVCFNCGEKGHK 255


>ref|XP_003605752.1| Pol polyprotein [Medicago truncatula] gi|355506807|gb|AES87949.1|
           Pol polyprotein [Medicago truncatula]
          Length = 745

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 40/148 (27%), Positives = 66/148 (44%), Gaps = 25/148 (16%)
 Frame = +1

Query: 1   PEFAKLRMQEEYEALIQGSMSVADYYHKFEDLSYYAPYDTKR----SRIERFKRGLNPPI 168
           PE  + + + E+  L QG+MSV +Y  KF +LS + P+ T      SR  +F+ GL P I
Sbjct: 123 PEDVRGKKEIEFLELKQGNMSVTEYAAKFVELSKFYPHYTAENAEFSRCIKFENGLRPDI 182

Query: 169 QHKVGHMRFNTLMQAVESASMAEQ---VNYRLQTEDRHKGKKDNDGKSSTRKFSGHCR-- 333
           +  +G+ +       V S  + E+    +Y++  E + KG++      S     G  +  
Sbjct: 183 KRAIGYQQLRVFQDLVNSCRIYEEDTKAHYKVVNERKGKGQQSRPKPYSAPADKGKQKMV 242

Query: 334 ----------------NCGKRGHKYAEC 369
                           NCG++GHK   C
Sbjct: 243 DVRRPKKKDAAEIVYFNCGEKGHKSNAC 270


>ref|XP_007028160.1| Uncharacterized protein TCM_023639 [Theobroma cacao]
           gi|508716765|gb|EOY08662.1| Uncharacterized protein
           TCM_023639 [Theobroma cacao]
          Length = 233

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
 Frame = +1

Query: 28  EEYEALIQGS-MSVADYYHKFEDLSYYAPY--DTKRSRIERFKRGLNPPIQHKVGHMRFN 198
           +E+E L+Q   M V++Y  +F  LS YAPY   T+R RI+RF +GL+ PI   +   RF 
Sbjct: 15  QEFETLVQAPRMIVSNYDIQFTQLSRYAPYLVQTERERIKRFIKGLHRPIYRILVSQRFT 74

Query: 199 TLMQAVESASMAEQVNYRLQTEDRHKGKKDNDGKSSTR 312
           +  + V++A   E  +  ++ E     K   +G S  R
Sbjct: 75  SYPEVVDAARKIEAGHTEVRVERERSKKNQGEGSSKYR 112


>emb|CAE04771.3| OSJNBa0079C19.12 [Oryza sativa Japonica Group]
          Length = 1484

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 12/127 (9%)
 Frame = +1

Query: 25  QEEYEALIQGSMSVADYYHKFEDLSYYAPYDTK--RSRIERFKRGLNPPIQHKVGHMRFN 198
           ++E+ +L QGS SV +Y H+F  L+ YAP D +    R E+F  GLN  + + +    + 
Sbjct: 400 KKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEERQEKFLEGLNDELSYPLMTGDYP 459

Query: 199 TLMQAVESASMAEQVNYRLQTEDRHKGK-KDNDGKSST-----RKFSGH----CRNCGKR 348
              + V+ A   E    R++ + R     K   G +ST     +K  G     C NCG  
Sbjct: 460 DFQKLVDKAIRQEDKYNRMEQKKRRIAHFKAQQGNTSTQQQPAKKEQGSKPVVCFNCGDP 519

Query: 349 GHKYAEC 369
           GH   +C
Sbjct: 520 GHYADKC 526