BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00018934
         (1618 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007207773.1| hypothetical protein PRUPE_ppa026368mg, part...    80   3e-39
ref|XP_007212800.1| hypothetical protein PRUPE_ppa020180mg [Prun...    79   2e-38
ref|XP_002468588.1| hypothetical protein SORBIDRAFT_01g048580 [S...    78   5e-33
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...    81   7e-33
gb|AAG51754.1|AC068667_33 reverse transcriptase, putative; 10003...    89   2e-32
ref|XP_004306191.1| PREDICTED: putative ribonuclease H protein A...    79   3e-32
ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S...    82   1e-31
ref|XP_006478211.1| PREDICTED: putative ribonuclease H protein A...    69   2e-31
ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein A...    80   2e-31
ref|XP_006478212.1| PREDICTED: putative ribonuclease H protein A...    69   3e-31
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ...    85   4e-31
gb|AAP53315.2| retrotransposon protein, putative, unclassified [...    85   4e-31
ref|XP_007203701.1| hypothetical protein PRUPE_ppa020995mg, part...    74   7e-31
gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptas...    74   9e-31
ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621...    71   1e-30
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta...    77   1e-30
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...    83   1e-30
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo...    83   2e-30
ref|XP_007219602.1| hypothetical protein PRUPE_ppa023113mg, part...    81   2e-30
ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626...    70   4e-30

>ref|XP_007207773.1| hypothetical protein PRUPE_ppa026368mg, partial [Prunus persica]
           gi|462403415|gb|EMJ08972.1| hypothetical protein
           PRUPE_ppa026368mg, partial [Prunus persica]
          Length = 1060

 Score = 79.7 bits (195), Expect(4) = 3e-39
 Identities = 37/99 (37%), Positives = 56/99 (56%)
 Frame = +2

Query: 476 TTSHRNKIEVFSYIRNRLKSRIQGWSEKYLFPAGK*ILLKSVASVMPNHAMSCFKILITL 655
           T + + + ++F +++++L   I GW EK L  AGK IL+K+V   +P ++MSCF+I   L
Sbjct: 458 TIAGKGRKQLFQHLKDKLWKHISGWKEKLLSRAGKEILIKAVLQAIPTYSMSCFRIPKGL 517

Query: 656 CKESHSVMSDFWWGNHTYKSTFHWAS*ERLFSKAFQRAL 772
           CKE + +M+ FWW     K   HW   E L    F   L
Sbjct: 518 CKELNGIMARFWWAKAKDKRGIHWVKWELLCKSKFAGGL 556



 Score = 60.8 bits (146), Expect(4) = 3e-39
 Identities = 26/68 (38%), Positives = 44/68 (64%)
 Frame = +1

Query: 190 AESEGKLIGLRISRICPTISHLLFEEDLLIFYKADLNDIEAIKDILKYYEQATGQIVNMQ 369
           AE  G L+G++++R  P+++HLLF +D ++F KA   D  A++ + + YE+ TGQ +N  
Sbjct: 361 AERRGDLVGVQVARGAPSVTHLLFADDSILFMKATNKDCMALETLFQTYEEVTGQQINYS 420

Query: 370 KSPIFFQP 393
           KS +   P
Sbjct: 421 KSALSLSP 428



 Score = 47.0 bits (110), Expect(4) = 3e-39
 Identities = 38/140 (27%), Positives = 61/140 (43%), Gaps = 10/140 (7%)
 Frame = +3

Query: 753  KLFKGRYFFGTNVLQAKKGSDPFWAWHGISSSIEIIKAVTRWKIGN--NHQFYC---LTT 917
            ++F+ RY      L+A+ G++P + W  +    E++    RW++G+  + Q Y    L  
Sbjct: 586  RIFRARYHPSVPFLEAEVGTNPSFIWRSLQWGKELLNKGLRWRVGSGVSIQVYTDKWLPA 645

Query: 918  PFTFKLQSSVSTLCQMSRTSLIMFA*LEP*HAPSCLPPTRSQP-----SILINWSNEEDM 1082
            P  FK+ S       +S     +F      + P        Q       I +      D 
Sbjct: 646  PSCFKIMSPPQ--LPLSTRVCDLFTSSGQWNVPLLKDIFWDQEVDAILQIPLASLAGHDC 703

Query: 1083 LLWHYTFSGSYSVKSGYIIA 1142
            L+WHY  +G YSVKSGY +A
Sbjct: 704  LIWHYERNGMYSVKSGYRLA 723



 Score = 44.3 bits (103), Expect(4) = 3e-39
 Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
 Frame = +1

Query: 1171 KEIITGESSSS-SLQKHY*NQIWSAVVPNKLKTFLSLCSWDILPVPHKLARKRFQQTP 1341
            K+ ++GE S+   L   +  +IW+  +PNK+K FL  C+WD LP    L  ++   TP
Sbjct: 727  KDKMSGEPSARVDLNSKFWKKIWALKIPNKIKFFLWRCAWDFLPCGQILFNRKIAPTP 784


>ref|XP_007212800.1| hypothetical protein PRUPE_ppa020180mg [Prunus persica]
            gi|462408665|gb|EMJ13999.1| hypothetical protein
            PRUPE_ppa020180mg [Prunus persica]
          Length = 1072

 Score = 79.3 bits (194), Expect(4) = 2e-38
 Identities = 37/99 (37%), Positives = 56/99 (56%)
 Frame = +2

Query: 476  TTSHRNKIEVFSYIRNRLKSRIQGWSEKYLFPAGK*ILLKSVASVMPNHAMSCFKILITL 655
            T + + + ++F +++++L   I GW EK L  AGK IL+K+V   +P ++MSCF+I   L
Sbjct: 708  TIAGKGRKQLFQHLKDKLWKHISGWKEKLLSRAGKEILIKAVLQAIPTYSMSCFQIPKGL 767

Query: 656  CKESHSVMSDFWWGNHTYKSTFHWAS*ERLFSKAFQRAL 772
            CKE + +M+ FWW     K   HW   E L    F   L
Sbjct: 768  CKELNGIMARFWWAKAKDKRGIHWVKWELLCKSKFAGGL 806



 Score = 57.8 bits (138), Expect(4) = 2e-38
 Identities = 25/68 (36%), Positives = 43/68 (63%)
 Frame = +1

Query: 190 AESEGKLIGLRISRICPTISHLLFEEDLLIFYKADLNDIEAIKDILKYYEQATGQIVNMQ 369
           AE  G L+G++++R  P+++HLLF +D ++F KA      A++ + + YE+ TGQ +N  
Sbjct: 611 AERRGDLVGVQVARGAPSVTHLLFADDSILFMKATNKACMALETLFQTYEEVTGQQINYS 670

Query: 370 KSPIFFQP 393
           KS +   P
Sbjct: 671 KSALSLSP 678



 Score = 47.4 bits (111), Expect(4) = 2e-38
 Identities = 38/141 (26%), Positives = 62/141 (43%), Gaps = 10/141 (7%)
 Frame = +3

Query: 753  KLFKGRYFFGTNVLQAKKGSDPFWAWHGISSSIEIIKAVTRWKIGN--NHQFYC---LTT 917
            ++F+ RY      L+A+ G++P + W  +    E++    RW++G+  + Q Y    L  
Sbjct: 836  RIFRARYHPSVPFLEAEVGTNPSFIWGSLQWGKELLNKGVRWRVGSGVSIQVYTDKWLPA 895

Query: 918  PFTFKLQSSVSTLCQMSRTSLIMFA*LEP*HAPSCLPPTRSQP-----SILINWSNEEDM 1082
            P  FK+ S       +S     +F      + P        Q       I +      D 
Sbjct: 896  PSCFKIMSPPQ--LPLSTRVCDLFTSSGQWNVPLLKDIFWDQEVDAILQIPLASLAGHDC 953

Query: 1083 LLWHYTFSGSYSVKSGYIIAK 1145
            L+WHY  +G YSVKSGY +A+
Sbjct: 954  LIWHYERNGMYSVKSGYRLAR 974



 Score = 44.7 bits (104), Expect(4) = 2e-38
 Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
 Frame = +1

Query: 1156 RLKRNKEIITGESSSS-SLQKHY*NQIWSAVVPNKLKTFLSLCSWDILPVPHKLARKRFQ 1332
            RL+++K  ++GE S+   L   +  +IW+  +PNK+K FL  C+WD LP    L  ++  
Sbjct: 974  RLEKDK--MSGEPSARVDLNSKFWKKIWALKIPNKIKFFLWRCAWDFLPCGQILFNRKIA 1031

Query: 1333 QTP 1341
             TP
Sbjct: 1032 PTP 1034


>ref|XP_002468588.1| hypothetical protein SORBIDRAFT_01g048580 [Sorghum bicolor]
           gi|241922442|gb|EER95586.1| hypothetical protein
           SORBIDRAFT_01g048580 [Sorghum bicolor]
          Length = 517

 Score = 77.8 bits (190), Expect(3) = 5e-33
 Identities = 34/86 (39%), Positives = 53/86 (61%)
 Frame = +2

Query: 488 RNKIEVFSYIRNRLKSRIQGWSEKYLFPAGK*ILLKSVASVMPNHAMSCFKILITLCKES 667
           +++ + F YI+ R+ +RIQGW EK L  AGK IL+K+VA  +P +AMS F +  + C + 
Sbjct: 183 KSRKKAFEYIKQRIWARIQGWQEKLLSKAGKEILIKAVAQAIPTYAMSYFNLTKSFCDDL 242

Query: 668 HSVMSDFWWGNHTYKSTFHWAS*ERL 745
            S++  +WW      +  HW S E+L
Sbjct: 243 SSMVGRYWWSEQDKTNKIHWLSWEKL 268



 Score = 66.2 bits (160), Expect(3) = 5e-33
 Identities = 31/80 (38%), Positives = 49/80 (61%)
 Frame = +1

Query: 169 LSILT*KAESEGKLIGLRISRICPTISHLLFEEDLLIFYKADLNDIEAIKDILKYYEQAT 348
           LS +   AE+ GK+ G++I R  P ++HL F +D L+  +A   D   +K IL+ YE+A+
Sbjct: 75  LSAMLQSAENAGKIEGIKICRGAPRVNHLFFADDSLMLMRARKEDAHELKHILEIYERAS 134

Query: 349 GQIVNMQKSPIFFQPQHASH 408
           GQ++N  KS I F P  + +
Sbjct: 135 GQVINKDKSSIMFSPNTSDY 154



 Score = 46.6 bits (109), Expect(3) = 5e-33
 Identities = 39/152 (25%), Positives = 61/152 (40%), Gaps = 14/152 (9%)
 Frame = +3

Query: 753  KLFKGRYFFGTNVLQAKKGSDPFWAWHGISSSIEIIKAVTRWKIGNNHQFYCLTTPFTFK 932
            ++ K RYF  +N+LQ K  +   + W  I   I ++K    W+IG+       T P+  +
Sbjct: 307  RVLKARYFPNSNILQCKARAGILYTWRSIIDGINLLKEGIIWRIGSGSNVNIWTDPWIPR 366

Query: 933  -------------LQSSVSTLCQMSRTSLIMFA*LEP*HAPSCLPPTRSQPSILINWSNE 1073
                         L + VS L   S  +       +         P  ++  ++I    E
Sbjct: 367  GTTRKPITPRGRYLITKVSDLINPSTGT------WDENLISDVFWPEDAEAILMIPTDYE 420

Query: 1074 E-DMLLWHYTFSGSYSVKSGYIIAKQLSKTQK 1166
              D   WHY   G +SVKS Y +A Q+   QK
Sbjct: 421  AVDWPAWHYDSKGVFSVKSAYKLAVQIRDHQK 452


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score = 81.3 bits (199), Expect(4) = 7e-33
 Identities = 34/87 (39%), Positives = 58/87 (66%)
 Frame = +2

Query: 491 NKIEVFSYIRNRLKSRIQGWSEKYLFPAGK*ILLKSVASVMPNHAMSCFKILITLCKESH 670
           +K +VFS++R+RL+SRI GWS K+L   GK +++KSVA+ +P + MSCF++   +  +  
Sbjct: 544 SKTKVFSFVRDRLQSRINGWSAKFLSKGGKEVMIKSVAATLPRYVMSCFRLPKAITSKLT 603

Query: 671 SVMSDFWWGNHTYKSTFHWAS*ERLFS 751
           S ++ FWW ++      HW + ++L S
Sbjct: 604 SAVAKFWWSSNGDSRGMHWMAWDKLCS 630



 Score = 57.4 bits (137), Expect(4) = 7e-33
 Identities = 28/67 (41%), Positives = 40/67 (59%)
 Frame = +1

Query: 187 KAESEGKLIGLRISRICPTISHLLFEEDLLIFYKADLNDIEAIKDILKYYEQATGQIVNM 366
           KAE +  + G++++   P +SHLLF +D L F KA+      I +ILK YE  +GQ +N 
Sbjct: 441 KAERQNLITGIKVATPSPAVSHLLFADDSLFFCKANKEQCGIILEILKQYESVSGQQINF 500

Query: 367 QKSPIFF 387
            KS I F
Sbjct: 501 SKSSIQF 507



 Score = 50.4 bits (119), Expect(4) = 7e-33
 Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 18/151 (11%)
 Frame = +3

Query: 747  FQKLFKGRYFFGTNVLQAKKGSDPFWAWHGISSSIEIIKAVTRWKIGNNHQFYCLTTPF- 923
            F K+FKGRYF  +N L + K   P + W  + S+  ++      ++G+         P+ 
Sbjct: 665  FAKVFKGRYFRKSNPLDSIKSYSPSYGWRSMISARSLVYKGLIKRVGSGASISVWNDPWI 724

Query: 924  -----------------TFKLQSSVSTLCQMSRTSLIMFA*LEP*HAPSCLPPTRSQPSI 1052
                             + K++S +      SR++      L+    P  +P   + P  
Sbjct: 725  PAQFPRPAKYGGSIVDPSLKVKSLID-----SRSNFWNIDLLKELFDPEDVPLISALP-- 777

Query: 1053 LINWSNEEDMLLWHYTFSGSYSVKSGYIIAK 1145
             I   N ED L WH+T +G+Y+VKSGY  A+
Sbjct: 778  -IGNPNMEDTLGWHFTKAGNYTVKSGYHTAR 807



 Score = 20.8 bits (42), Expect(4) = 7e-33
 Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 4/35 (11%)
 Frame = +1

Query: 1231 IWSAVVPNKLKTFLSLCSWDIL----PVPHKLARK 1323
            IW    P KL+ FL    W IL    PV   L ++
Sbjct: 828  IWKVQCPPKLRHFL----WQILSGCVPVSENLRKR 858


>gb|AAG51754.1|AC068667_33 reverse transcriptase, putative; 100033-105622 [Arabidopsis thaliana]
          Length = 1557

 Score = 88.6 bits (218), Expect(3) = 2e-32
 Identities = 40/85 (47%), Positives = 56/85 (65%)
 Frame = +2

Query: 491  NKIEVFSYIRNRLKSRIQGWSEKYLFPAGK*ILLKSVASVMPNHAMSCFKILITLCKESH 670
            +K+++  YIR+RLKSR+ GW  + L   GK ILLK+VA  MP +A+SCFK+  T C+   
Sbjct: 1069 SKVQLLDYIRDRLKSRLSGWFARILSLGGKQILLKAVAMAMPVYAISCFKLTKTTCENLS 1128

Query: 671  SVMSDFWWGNHTYKSTFHWAS*ERL 745
            S M+DFWW    +K   HW S E++
Sbjct: 1129 SAMADFWWNALEHKRKTHWVSWEKM 1153



 Score = 64.7 bits (156), Expect(3) = 2e-32
 Identities = 34/76 (44%), Positives = 47/76 (61%)
 Frame = +1

Query: 160  LQKLSILT*KAESEGKLIGLRISRICPTISHLLFEEDLLIFYKADLNDIEAIKDILKYYE 339
            L+ L+ L  +AES+  + G+R S   P I HLLF +D L   KAD  ++  IK+I K Y 
Sbjct: 957  LEGLTHLMNRAESQSLISGIRFSPNGPAIHHLLFTDDSLFMCKADKKEVAVIKNIFKVYG 1016

Query: 340  QATGQIVNMQKSPIFF 387
             ATGQ++N +KS I F
Sbjct: 1017 DATGQMINFEKSSITF 1032



 Score = 35.4 bits (80), Expect(3) = 2e-32
 Identities = 35/151 (23%), Positives = 60/151 (39%), Gaps = 18/151 (11%)
 Frame = +3

Query: 765  GRYFFGTNVLQAKKGSDPFWAWHGISSSIEIIKAVTRWKIGNNHQFYC------------ 908
            GRYF   + L+A  G+ P +AW  +    +++    R +IGN +                
Sbjct: 1161 GRYFPDEDFLEADLGARPSYAWRSVLHGRDLLTKGLRKEIGNGNSISVWMDNWIYDNGPR 1220

Query: 909  --LTTPFTFKLQSSVSTLCQMS----RTSLIMFA*LEP*HAPSCLPPTRSQPSILINWSN 1070
              L   F+  L   V  L  +        L+     +      C    + +P +     +
Sbjct: 1221 IPLQKHFSVSLNLRVKDLINLDGRCWNRDLLQDLFFQVDIDLIC----KKKPVV-----D 1271

Query: 1071 EEDMLLWHYTFSGSYSVKSGYIIAKQLSKTQ 1163
             +D  +W ++ SG YSVKSGY +  Q +K +
Sbjct: 1272 MDDFWVWLHSKSGEYSVKSGYWLVFQSNKPE 1302


>ref|XP_004306191.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 755

 Score = 79.0 bits (193), Expect(3) = 3e-32
 Identities = 42/117 (35%), Positives = 67/117 (57%), Gaps = 2/117 (1%)
 Frame = +2

Query: 383 FFSHNTP--VIQKNSHVQHQRTQNGG*RQIIWFTTSHRNKIEVFSYIRNRLKSRIQGWSE 556
           +FS NT   ++Q  S++ + +      + +   T   R+K+    YIR+ +  +IQGW +
Sbjct: 194 YFSPNTHPHIVQLISYMLNMKAVKDLGKYLGLPTIWSRSKVSALGYIRDTILKKIQGWKQ 253

Query: 557 KYLFPAGK*ILLKSVASVMPNHAMSCFKILITLCKESHSVMSDFWWGNHTYKSTFHW 727
             L PAGK IL+K+VA+ +P + M+CFK   TLC + +S ++ FWW N T     HW
Sbjct: 254 GILSPAGKEILIKAVAASIPIYPMACFKFPKTLCNQINSALARFWWSN-TSDQGVHW 309



 Score = 55.5 bits (132), Expect(3) = 3e-32
 Identities = 44/152 (28%), Positives = 67/152 (44%), Gaps = 13/152 (8%)
 Frame = +3

Query: 729  HPRRGFFQKLFKGRYFFGTNVLQAKKGSDPFWAWHGISSSIEIIKAVTRWKIGNNHQFYC 908
            H     + ++ + RYF  T+  +A KG  P W W  +     ++   T W+IGN     C
Sbjct: 346  HSPTALWVQVLQARYFSNTSFRKAHKGGTPSWIWSSLLEGRNLLFQGTSWRIGNG----C 401

Query: 909  LTTPFTFKL--QSSVSTLCQMSRTSLIM---FA*LEP--------*HAPSCLPPTRSQPS 1049
            LT  +  K   Q+S S      +   +M      L+P         H  S       Q  
Sbjct: 402  LTDMWNDKWLPQASYSLASHYGQQPPLMVNQLITLDPPSWNLTSVAHILSVSDQAAIQVI 461

Query: 1050 ILINWSNEEDMLLWHYTFSGSYSVKSGYIIAK 1145
             L++  N ED L+W +  SGSY+V+SGY +A+
Sbjct: 462  PLVDTGN-EDKLIWPHQQSGSYTVRSGYHLAQ 492



 Score = 53.5 bits (127), Expect(3) = 3e-32
 Identities = 24/64 (37%), Positives = 38/64 (59%)
 Frame = +1

Query: 217 LRISRICPTISHLLFEEDLLIFYKADLNDIEAIKDILKYYEQATGQIVNMQKSPIFFQPQ 396
           ++I  + P +SHL F +D L F +A + + E + D+L +Y  A GQI+N  KS ++F P 
Sbjct: 139 VQIGDLGPKVSHLFFADDSLSFLRATVFNCEVLSDVLHHYCSAFGQIINTMKSSLYFSPN 198

Query: 397 HASH 408
              H
Sbjct: 199 THPH 202


>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
           gi|241926916|gb|EES00061.1| hypothetical protein
           SORBIDRAFT_03g001780 [Sorghum bicolor]
          Length = 631

 Score = 82.4 bits (202), Expect(3) = 1e-31
 Identities = 37/86 (43%), Positives = 54/86 (62%)
 Frame = +2

Query: 488 RNKIEVFSYIRNRLKSRIQGWSEKYLFPAGK*ILLKSVASVMPNHAMSCFKILITLCKES 667
           +++ + F YI+ ++ SRIQGW EK L  AGK IL+K+VA  +P +AMSCF +   LC E 
Sbjct: 340 KSRKKPFEYIKKKIWSRIQGWQEKLLSKAGKEILIKAVAQSIPTYAMSCFDLTKGLCDEL 399

Query: 668 HSVMSDFWWGNHTYKSTFHWAS*ERL 745
            S++  +WW      +  HW S E+L
Sbjct: 400 SSIIGRYWWSQQDKANKIHWISWEKL 425



 Score = 68.6 bits (166), Expect(3) = 1e-31
 Identities = 32/80 (40%), Positives = 50/80 (62%)
 Frame = +1

Query: 169 LSILT*KAESEGKLIGLRISRICPTISHLLFEEDLLIFYKADLNDIEAIKDILKYYEQAT 348
           LS +  KAE +GK+ G++I R  P ++HL F +D LI  +A  +D   ++ IL  YE+A+
Sbjct: 232 LSAMLQKAEQKGKIEGIKICRGAPKVNHLFFADDSLILMRARASDALELRRILDVYEKAS 291

Query: 349 GQIVNMQKSPIFFQPQHASH 408
           GQ++N +KS + F P    H
Sbjct: 292 GQVINKEKSSMMFSPNTGQH 311



 Score = 35.0 bits (79), Expect(3) = 1e-31
 Identities = 30/138 (21%), Positives = 53/138 (38%), Gaps = 8/138 (5%)
 Frame = +3

Query: 753  KLFKGRYFFGTNVLQAKKGSDPFWAWHGISSSIEIIKAVTRWKIGNNHQFYCLTTPFTFK 932
            ++ K RYF  +++L         + W  I   + ++K    W+IGN         P+  K
Sbjct: 464  QVLKARYFPHSDILHCSPRPRISYTWRSILKGVALLKEGIIWRIGNGKNVKIWEHPWIPK 523

Query: 933  -------LQSSVSTLCQMSRTSLIMFA*LEP*HAPSCLPPTRSQPSILINWSNE-EDMLL 1088
                        S L +++     +    +         P  ++  + I      ED L 
Sbjct: 524  GITRKPITPRGASLLTRVNELINPVTGEWDEQLVNDLFWPQDAEEILQIPIDEHMEDWLA 583

Query: 1089 WHYTFSGSYSVKSGYIIA 1142
            WH+  +G +SVKS Y +A
Sbjct: 584  WHFDATGLFSVKSAYKLA 601


>ref|XP_006478211.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
           X1 [Citrus sinensis]
          Length = 478

 Score = 68.6 bits (166), Expect(3) = 2e-31
 Identities = 32/88 (36%), Positives = 50/88 (56%)
 Frame = +2

Query: 488 RNKIEVFSYIRNRLKSRIQGWSEKYLFPAGK*ILLKSVASVMPNHAMSCFKILITLCKES 667
           R KI  F+ I+ R+ +++  W  +     GK +L+K+VA  +P  AMS FKI   LC + 
Sbjct: 195 RKKISFFNEIKLRVLNKLSSWQTRSFSSGGKEVLIKAVAQAVPAFAMSVFKIPQGLCDDI 254

Query: 668 HSVMSDFWWGNHTYKSTFHWAS*ERLFS 751
              ++ FWWG+   + + HWA  E+L S
Sbjct: 255 QRAVARFWWGSSETRRSIHWARWEKLCS 282



 Score = 59.7 bits (143), Expect(3) = 2e-31
 Identities = 40/151 (26%), Positives = 73/151 (48%), Gaps = 10/151 (6%)
 Frame = +3

Query: 729  HPRRGFFQKLFKGRYFFGTNVLQAKKGSDPFWAWHGISSSIEIIKAVTRWKIGNNHQFYC 908
            H       K+ K +YF  T+ ++AK GS+P + W  I    +++    RW++GN H+   
Sbjct: 311  HNLDSLMAKILKAKYFKHTDFMEAKLGSNPSFVWRSILWGRQLLHEGLRWRVGNGHKISV 370

Query: 909  LTTPFTFKLQSSVST-LCQMSRTSLI---------MFA*LEP*HAPSCLPPTRSQPSILI 1058
             +  +  K +   ST + ++S  +++             +   H P  +  T     I +
Sbjct: 371  FSRNWMKKGEFHNSTSIARLSNDAVVADFIDEKNQWKQEMVAQHFPKEI--TERILKIPL 428

Query: 1059 NWSNEEDMLLWHYTFSGSYSVKSGYIIAKQL 1151
              + +ED+++W Y   G+YSVKSGY +A +L
Sbjct: 429  PKTPQEDVMIWSYDKHGAYSVKSGYQLAVKL 459



 Score = 57.0 bits (136), Expect(3) = 2e-31
 Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
 Frame = +1

Query: 154 HVLQK---LSILT*KAESEGKLIGLRISRICPTISHLLFEEDLLIFYKADLNDIEAIKDI 324
           H+L +    S L  +AES+  + GLR SR   +I+HLLF +D L+F KA L +   +K I
Sbjct: 80  HILNEGEVFSNLLKQAESQSLIHGLRFSRSL-SITHLLFADDSLVFSKASLTECRKLKGI 138

Query: 325 LKYYEQATGQIVNMQKSPIFF 387
              Y  A+GQ+ N  KS +FF
Sbjct: 139 FYGYSAASGQVFNYDKSSMFF 159


>ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 1152

 Score = 80.1 bits (196), Expect(3) = 2e-31
 Identities = 41/128 (32%), Positives = 67/128 (52%)
 Frame = +2

Query: 368 RNHPFFFSHNTPVIQKNSHVQHQRTQNGG*RQIIWFTTSHRNKIEVFSYIRNRLKSRIQG 547
           RN P +  H+   +     V++     G   ++ +      +K E F Y+ +R++ R QG
Sbjct: 483 RNVPLWKQHDLAAVLGVQRVENHEKYLGLPTELSY------SKDEAFRYLIDRVRKRTQG 536

Query: 548 WSEKYLFPAGK*ILLKSVASVMPNHAMSCFKILITLCKESHSVMSDFWWGNHTYKSTFHW 727
           W +K L   GK +LLK+V   +P + MSCF++   LC E H +M+ FWWG    +   HW
Sbjct: 537 WRDKTLSGVGKEVLLKAVIQSIPTYVMSCFELPRHLCNEMHQLMARFWWGEFGDERKIHW 596

Query: 728 AS*ERLFS 751
            + ++L S
Sbjct: 597 IAWDKLCS 604



 Score = 57.4 bits (137), Expect(3) = 2e-31
 Identities = 28/73 (38%), Positives = 46/73 (63%)
 Frame = +1

Query: 169 LSILT*KAESEGKLIGLRISRICPTISHLLFEEDLLIFYKADLNDIEAIKDILKYYEQAT 348
           LS +  +AE+ G++ G+++    P+ISHL F +D  IF +A+  D+  +KDI   YE  +
Sbjct: 409 LSRMIKQAETNGEIQGVKVCTDAPSISHLYFADDSFIFSRAEERDMLCMKDIFVTYETMS 468

Query: 349 GQIVNMQKSPIFF 387
           GQ +N +KS + F
Sbjct: 469 GQQINYEKSSVSF 481



 Score = 47.4 bits (111), Expect(3) = 2e-31
 Identities = 35/152 (23%), Positives = 67/152 (44%), Gaps = 13/152 (8%)
 Frame = +3

Query: 753  KLFKGRYFFGTNVLQAKKGSDPFWAWHGISSSIEIIKAVTRWKIGNNHQFYC-----LTT 917
            ++ K +YF  ++++QA+ G    ++W  +    E+++   R+++GN    +      L  
Sbjct: 641  QVLKMKYFPTSSLIQAEVGKRISYSWRSLMRGKELLQQGLRFQVGNGENIHLWDDPWLPL 700

Query: 918  PFTFK------LQSSVSTLCQMSRTSLIMFA*LEP*HAPSCLPPTRSQ--PSILINWSNE 1073
            P+TFK        S    +C++                     P  S+    I ++ +  
Sbjct: 701  PYTFKPFSLPMHGSEGMRVCELIEEGT---GGWNEWLLEELFTPMESEIILKIPLSLNGG 757

Query: 1074 EDMLLWHYTFSGSYSVKSGYIIAKQLSKTQKK 1169
            ED L+WH+   G Y+VKSGY + + L    +K
Sbjct: 758  EDRLVWHFDNKGCYNVKSGYFVGRLLDGLNRK 789


>ref|XP_006478212.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
           X2 [Citrus sinensis]
          Length = 387

 Score = 68.6 bits (166), Expect(3) = 3e-31
 Identities = 32/88 (36%), Positives = 50/88 (56%)
 Frame = +2

Query: 488 RNKIEVFSYIRNRLKSRIQGWSEKYLFPAGK*ILLKSVASVMPNHAMSCFKILITLCKES 667
           R KI  F+ I+ R+ +++  W  +     GK +L+K+VA  +P  AMS FKI   LC + 
Sbjct: 104 RKKISFFNEIKLRVLNKLSSWQTRSFSSGGKEVLIKAVAQAVPAFAMSVFKIPQGLCDDI 163

Query: 668 HSVMSDFWWGNHTYKSTFHWAS*ERLFS 751
              ++ FWWG+   + + HWA  E+L S
Sbjct: 164 QRAVARFWWGSSETRRSIHWARWEKLCS 191



 Score = 59.7 bits (143), Expect(3) = 3e-31
 Identities = 40/151 (26%), Positives = 73/151 (48%), Gaps = 10/151 (6%)
 Frame = +3

Query: 729  HPRRGFFQKLFKGRYFFGTNVLQAKKGSDPFWAWHGISSSIEIIKAVTRWKIGNNHQFYC 908
            H       K+ K +YF  T+ ++AK GS+P + W  I    +++    RW++GN H+   
Sbjct: 220  HNLDSLMAKILKAKYFKHTDFMEAKLGSNPSFVWRSILWGRQLLHEGLRWRVGNGHKISV 279

Query: 909  LTTPFTFKLQSSVST-LCQMSRTSLI---------MFA*LEP*HAPSCLPPTRSQPSILI 1058
             +  +  K +   ST + ++S  +++             +   H P  +  T     I +
Sbjct: 280  FSRNWMKKGEFHNSTSIARLSNDAVVADFIDEKNQWKQEMVAQHFPKEI--TERILKIPL 337

Query: 1059 NWSNEEDMLLWHYTFSGSYSVKSGYIIAKQL 1151
              + +ED+++W Y   G+YSVKSGY +A +L
Sbjct: 338  PKTPQEDVMIWSYDKHGAYSVKSGYQLAVKL 368



 Score = 56.2 bits (134), Expect(3) = 3e-31
 Identities = 30/67 (44%), Positives = 42/67 (62%)
 Frame = +1

Query: 187 KAESEGKLIGLRISRICPTISHLLFEEDLLIFYKADLNDIEAIKDILKYYEQATGQIVNM 366
           +AES+  + GLR SR   +I+HLLF +D L+F KA L +   +K I   Y  A+GQ+ N 
Sbjct: 3   EAESQSLIHGLRFSRSL-SITHLLFADDSLVFSKASLTECRKLKGIFYGYSAASGQVFNY 61

Query: 367 QKSPIFF 387
            KS +FF
Sbjct: 62  DKSSMFF 68


>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1509

 Score = 84.7 bits (208), Expect(3) = 4e-31
 Identities = 36/86 (41%), Positives = 55/86 (63%)
 Frame = +2

Query: 488  RNKIEVFSYIRNRLKSRIQGWSEKYLFPAGK*ILLKSVASVMPNHAMSCFKILITLCKES 667
            R++ ++FSY++ R+  RIQGW EK L  AGK IL+K+VA V+P  AM CF++   LC + 
Sbjct: 960  RSRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQVIPTFAMGCFELTKDLCDQI 1019

Query: 668  HSVMSDFWWGNHTYKSTFHWAS*ERL 745
              +++ +WW N    +  HW S  +L
Sbjct: 1020 SKMIAKYWWSNQEKDNKMHWLSWNKL 1045



 Score = 68.6 bits (166), Expect(3) = 4e-31
 Identities = 32/78 (41%), Positives = 51/78 (65%)
 Frame = +1

Query: 172  SILT*KAESEGKLIGLRISRICPTISHLLFEEDLLIFYKADLNDIEAIKDILKYYEQATG 351
            S L  K E EG+L G+RI +  P++SHLLF +D LI  +A+  + + ++ IL+ YE+ +G
Sbjct: 853  SALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTILQIYEECSG 912

Query: 352  QIVNMQKSPIFFQPQHAS 405
            Q++N  KS + F P  +S
Sbjct: 913  QVINKDKSAVMFSPNTSS 930



 Score = 30.8 bits (68), Expect(3) = 4e-31
 Identities = 24/143 (16%), Positives = 59/143 (41%), Gaps = 8/143 (5%)
 Frame = +3

Query: 753  KLFKGRYFFGTNVLQAKKGSDPFWAWHGISSSIEIIKAVTRWKIGNNHQFYCLTTPFTFK 932
            ++ + +YF   +  + K+ S+  + W  I   + +++    W++G+  +      P+  +
Sbjct: 1084 RVLRAKYFPLGDCFRPKQTSNVSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWADPWIPR 1143

Query: 933  LQSSVSTLCQMSRTSLIMFA*LEP*HA---PSCLPPTRSQPSILINWS-----NEEDMLL 1088
              S      + +     +   ++P         L  T  +  +    S       ED+L 
Sbjct: 1144 GWSRKPMTPRGANLVTKVEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHVEMEDVLA 1203

Query: 1089 WHYTFSGSYSVKSGYIIAKQLSK 1157
            WH+   G ++VKS Y + +++ +
Sbjct: 1204 WHFDARGCFTVKSAYKVQREMER 1226


>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1505

 Score = 84.7 bits (208), Expect(3) = 4e-31
 Identities = 36/86 (41%), Positives = 55/86 (63%)
 Frame = +2

Query: 488  RNKIEVFSYIRNRLKSRIQGWSEKYLFPAGK*ILLKSVASVMPNHAMSCFKILITLCKES 667
            R++ ++FSY++ R+  RIQGW EK L  AGK IL+K+VA V+P  AM CF++   LC + 
Sbjct: 956  RSRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQVIPTFAMGCFELTKDLCDQI 1015

Query: 668  HSVMSDFWWGNHTYKSTFHWAS*ERL 745
              +++ +WW N    +  HW S  +L
Sbjct: 1016 SKMIAKYWWSNQEKDNKMHWLSWNKL 1041



 Score = 68.6 bits (166), Expect(3) = 4e-31
 Identities = 32/78 (41%), Positives = 51/78 (65%)
 Frame = +1

Query: 172  SILT*KAESEGKLIGLRISRICPTISHLLFEEDLLIFYKADLNDIEAIKDILKYYEQATG 351
            S L  K E EG+L G+RI +  P++SHLLF +D LI  +A+  + + ++ IL+ YE+ +G
Sbjct: 849  SALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTILQIYEECSG 908

Query: 352  QIVNMQKSPIFFQPQHAS 405
            Q++N  KS + F P  +S
Sbjct: 909  QVINKDKSAVMFSPNTSS 926



 Score = 30.8 bits (68), Expect(3) = 4e-31
 Identities = 24/143 (16%), Positives = 59/143 (41%), Gaps = 8/143 (5%)
 Frame = +3

Query: 753  KLFKGRYFFGTNVLQAKKGSDPFWAWHGISSSIEIIKAVTRWKIGNNHQFYCLTTPFTFK 932
            ++ + +YF   +  + K+ S+  + W  I   + +++    W++G+  +      P+  +
Sbjct: 1080 RVLRAKYFPLGDCFRPKQTSNVSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWADPWIPR 1139

Query: 933  LQSSVSTLCQMSRTSLIMFA*LEP*HA---PSCLPPTRSQPSILINWS-----NEEDMLL 1088
              S      + +     +   ++P         L  T  +  +    S       ED+L 
Sbjct: 1140 GWSRKPMTPRGANLVTKVEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHVEMEDVLA 1199

Query: 1089 WHYTFSGSYSVKSGYIIAKQLSK 1157
            WH+   G ++VKS Y + +++ +
Sbjct: 1200 WHFDARGCFTVKSAYKVQREMER 1222


>ref|XP_007203701.1| hypothetical protein PRUPE_ppa020995mg, partial [Prunus persica]
            gi|462399232|gb|EMJ04900.1| hypothetical protein
            PRUPE_ppa020995mg, partial [Prunus persica]
          Length = 1367

 Score = 74.3 bits (181), Expect(4) = 7e-31
 Identities = 36/86 (41%), Positives = 51/86 (59%)
 Frame = +2

Query: 488  RNKIEVFSYIRNRLKSRIQGWSEKYLFPAGK*ILLKSVASVMPNHAMSCFKILITLCKES 667
            R++ + F+ ++ R+  +IQGW  K L  AGK ILLK VA V+P + M+CF I   LC E 
Sbjct: 1008 RSRRQCFNSLKERIWKKIQGWKAKLLSFAGKEILLKVVAQVVPIYMMNCFLIPKCLCDEI 1067

Query: 668  HSVMSDFWWGNHTYKSTFHWAS*ERL 745
              VM+ +WWG    +   HW S  +L
Sbjct: 1068 QQVMARYWWGEQDGQRKIHWLSWNKL 1093



 Score = 52.4 bits (124), Expect(4) = 7e-31
 Identities = 26/75 (34%), Positives = 43/75 (57%)
 Frame = +1

Query: 163  QKLSILT*KAESEGKLIGLRISRICPTISHLLFEEDLLIFYKADLNDIEAIKDILKYYEQ 342
            + LS L  +AE    L G+ + R  P++SHL F +D  +F +A+  D E +  I + YE 
Sbjct: 898  EALSSLILQAERRNLLHGVNLCRGAPSVSHLFFTDDRFLFLRANQQDCEQLSIIFQKYEM 957

Query: 343  ATGQIVNMQKSPIFF 387
              GQ ++++KS + F
Sbjct: 958  VLGQKIHLEKSCVSF 972



 Score = 52.4 bits (124), Expect(4) = 7e-31
 Identities = 32/137 (23%), Positives = 63/137 (45%), Gaps = 4/137 (2%)
 Frame = +3

Query: 753  KLFKGRYFFGTNVLQAKKGSDPFWAWHGISSSIEIIKAVTRWKIGNNHQFYCLTTPFTFK 932
            ++ K RYF   ++L+A+ G  P + W  +  +  +I+  ++W+IGN H         T  
Sbjct: 1132 RILKARYFKNCSILEAQIGHSPSYIWQSLCKARVLIEKESQWRIGNGHSVRIWGDSLTLN 1191

Query: 933  LQS----SVSTLCQMSRTSLIMFA*LEP*HAPSCLPPTRSQPSILINWSNEEDMLLWHYT 1100
            L            Q     L  +   E     +C+       +I +++ +  D+L+WH+ 
Sbjct: 1192 LSKFPHHKQRVTMQWKEDLLQAWFSTE---EVNCI------RNIPLSFRHPPDILIWHFE 1242

Query: 1101 FSGSYSVKSGYIIAKQL 1151
              G Y+V+SG+ +A ++
Sbjct: 1243 RDGQYTVRSGHEVAPRV 1259



 Score = 23.9 bits (50), Expect(4) = 7e-31
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +1

Query: 1228 QIWSAVVPNKLKTFLSLCSWDILPVPHKL 1314
            +IW A VP K++ F+     +ILP    L
Sbjct: 1284 KIWKARVPPKVRIFIWRALLNILPTKDNL 1312


>gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 653

 Score = 73.9 bits (180), Expect(3) = 9e-31
 Identities = 43/124 (34%), Positives = 70/124 (56%), Gaps = 3/124 (2%)
 Frame = +2

Query: 383 FFSHNTPVIQKNSHVQHQRTQNG-G*RQIIWFTTS-HRNKIEVFSYIRNRLKSRIQGWSE 556
           +FS N PV +KN+         G G R+ +   +   R+K  +F+YI++R+ +RI G S 
Sbjct: 314 YFSRNVPVTKKNTLSNMLWVSEGIGIRKYLGLPSMIGRSKKSIFNYIKDRIWNRISGLSS 373

Query: 557 KYLFPAGK*ILLKSVASVMPNHAMSCFKILITLCKESHSVMSDFWWG-NHTYKSTFHWAS 733
           K L  AGK +L+KSVA  +P++ MS F +  ++  +   +++ FWWG  +  +    W S
Sbjct: 374 KMLSQAGKEVLIKSVAQAIPSYCMSVFLLPHSIADDIEKMLNSFWWGMKNEGRGGIRWMS 433

Query: 734 *ERL 745
            ERL
Sbjct: 434 WERL 437



 Score = 69.3 bits (168), Expect(3) = 9e-31
 Identities = 32/73 (43%), Positives = 50/73 (68%)
 Frame = +1

Query: 169 LSILT*KAESEGKLIGLRISRICPTISHLLFEEDLLIFYKADLNDIEAIKDILKYYEQAT 348
           +S L  +AE    L G+++ +  PT+SHLLF +D  +F++A+ N+  A+KDIL  Y  A+
Sbjct: 243 MSTLIKQAERNNILHGVKVCKRAPTVSHLLFADDSFLFFRANENETRALKDILDTYANAS 302

Query: 349 GQIVNMQKSPIFF 387
            Q++NMQKS I+F
Sbjct: 303 DQLINMQKSEIYF 315



 Score = 39.7 bits (91), Expect(3) = 9e-31
 Identities = 29/127 (22%), Positives = 50/127 (39%)
 Frame = +3

Query: 753  KLFKGRYFFGTNVLQAKKGSDPFWAWHGISSSIEIIKAVTRWKIGNNHQFYCLTTPFTFK 932
            ++FK +YF   N L A  G +P + W  I SS   +K   +W+IG+      ++     +
Sbjct: 476  RIFKAKYFTNENFLGASLGHNPSYVWRSIWSSRIFLKTGYQWRIGDGSTTATVSHLIDAQ 535

Query: 933  LQSSVSTLCQMSRTSLIMFA*LEP*HAPSCLPPTRSQPSILINWSNEEDMLLWHYTFSGS 1112
             +S    L + +                  L        I +    + D ++W +   G 
Sbjct: 536  TRSWNEPLIRNNFN----------------LRDVDEILKIPLLHCEQNDAIIWRFDKKGV 579

Query: 1113 YSVKSGY 1133
            YSVK+ Y
Sbjct: 580  YSVKNAY 586


>ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621413 [Citrus sinensis]
          Length = 2303

 Score = 71.2 bits (173), Expect(3) = 1e-30
 Identities = 34/86 (39%), Positives = 49/86 (56%)
 Frame = +2

Query: 488 RNKIEVFSYIRNRLKSRIQGWSEKYLFPAGK*ILLKSVASVMPNHAMSCFKILITLCKES 667
           R K   F  ++ R+ S+I  W  K     GK IL+K+VA  +P +AMS FK+   LC+E 
Sbjct: 736 RKKTSFFREVKLRVLSKINNWQHKMFSSGGKEILIKAVAQAVPAYAMSVFKLPKGLCEEI 795

Query: 668 HSVMSDFWWGNHTYKSTFHWAS*ERL 745
            S ++ FWWG+   K   HWA  ++L
Sbjct: 796 QSEIAKFWWGSKKDKRGIHWARWDKL 821



 Score = 57.4 bits (137), Expect(3) = 1e-30
 Identities = 46/150 (30%), Positives = 65/150 (43%), Gaps = 17/150 (11%)
 Frame = +3

Query: 753  KLFKGRYFFGTNVLQAKKGSDPFWAWHGISSSIEIIKAVTRWKIGNNHQFYC-----LTT 917
            K+ + RYF   + L AK GS+P + W  I    ++I+   RW+IGN           +  
Sbjct: 860  KVLRARYFKSCSFLDAKPGSNPSFIWRSILWGRQVIQKGARWRIGNGSNILVYKDNWIPR 919

Query: 918  PFTFK--------LQSSVSTLC----QMSRTSLIMFA*LEP*HAPSCLPPTRSQPSILIN 1061
            P TFK        + ++V  L       +   L      E   A   +P  RSQ      
Sbjct: 920  PDTFKPISPPTLPIDTTVGELMDDENNWNVAKLNQHFMQEDTEAILKIPLPRSQ------ 973

Query: 1062 WSNEEDMLLWHYTFSGSYSVKSGYIIAKQL 1151
               + D ++WHY   G YSVKSGY IA +L
Sbjct: 974  ---KVDEMMWHYDKHGEYSVKSGYQIALKL 1000



 Score = 53.9 bits (128), Expect(3) = 1e-30
 Identities = 30/72 (41%), Positives = 46/72 (63%)
 Frame = +1

Query: 172 SILT*KAESEGKLIGLRISRICPTISHLLFEEDLLIFYKADLNDIEAIKDILKYYEQATG 351
           S L  +AE++ ++ GLR +    TISHLLF +D L+F  A + + + +K I   Y +A+G
Sbjct: 630 SSLLLQAETKKRISGLRFAEDV-TISHLLFADDSLVFSTASVAECKHLKGIFDRYAKASG 688

Query: 352 QIVNMQKSPIFF 387
           QI N +KS +FF
Sbjct: 689 QIFNFEKSSMFF 700


>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1715

 Score = 77.0 bits (188), Expect(3) = 1e-30
 Identities = 30/70 (42%), Positives = 50/70 (71%)
 Frame = +2

Query: 488  RNKIEVFSYIRNRLKSRIQGWSEKYLFPAGK*ILLKSVASVMPNHAMSCFKILITLCKES 667
            R K+E+F YI  ++K R +GW+  YL PAGK I++K++A  +P ++M+CF +   +C E 
Sbjct: 1121 RRKVELFEYIVTKVKERTEGWAYNYLSPAGKEIVIKAIAMALPVYSMNCFLLPTLICNEI 1180

Query: 668  HSVMSDFWWG 697
            +S+++ FWWG
Sbjct: 1181 NSLITAFWWG 1190



 Score = 59.7 bits (143), Expect(3) = 1e-30
 Identities = 32/73 (43%), Positives = 46/73 (63%)
 Frame = +1

Query: 169  LSILT*KAESEGKLIGLRISRICPTISHLLFEEDLLIFYKADLNDIEAIKDILKYYEQAT 348
            LS +  KAE   ++ G++I++ C  ISHLLF +D L F +A   +IE +  I K YE+A+
Sbjct: 1013 LSNMLRKAEVNKQIHGMKITKDCLAISHLLFADDSLFFCRASNQNIEQLALIFKKYEEAS 1072

Query: 349  GQIVNMQKSPIFF 387
            GQ +N  KS I F
Sbjct: 1073 GQKINYAKSSIIF 1085



 Score = 45.8 bits (107), Expect(3) = 1e-30
 Identities = 48/215 (22%), Positives = 86/215 (40%), Gaps = 17/215 (7%)
 Frame = +3

Query: 753  KLFKGRYFFGTNVLQAKKGSDPFWAWHGISSSIEIIKAVTRWKIGNNHQFYCLTTPFTFK 932
            +L+KG Y+  T  L+A KG    + W+ I     +++   R ++G+         P+   
Sbjct: 1227 RLYKGLYYPNTTYLRANKGGHASYGWNSIQEGKLLLQQGLRVRLGDGQTTKIWEDPWLPT 1286

Query: 933  L------------QSSVSTLCQMSRTSLIMFA*LEP*HAPSCLPPTRSQPSILINWSN-- 1070
            L               V+ L + ++         +P      L P   Q +  +  SN  
Sbjct: 1287 LPPRPARGPILDEDMKVADLWRENKRE------WDPVIFEGVLNPEDQQLAKSLYLSNYA 1340

Query: 1071 EEDMLLWHYTFSGSYSVKSGYIIAKQLSKTQKK*RNHHR*IQLLFPTE---TLLKSNLVC 1241
              D   W YT +  Y+V+SGY +A  ++ T++         +++ P E    L +     
Sbjct: 1341 ARDSYKWAYTRNTQYTVRSGYWVATHVNLTEE---------EIINPLEGDVPLKQEIWRL 1391

Query: 1242 RRTKQAQDISFALLLGHSTCTTQTGAKKIPTDPIC 1346
            + T + +   +  L G  + TTQ   + IP DP C
Sbjct: 1392 KITPKIKHFIWRCLSGALSTTTQLRNRNIPADPTC 1426


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score = 83.2 bits (204), Expect(3) = 1e-30
 Identities = 35/86 (40%), Positives = 54/86 (62%)
 Frame = +2

Query: 488  RNKIEVFSYIRNRLKSRIQGWSEKYLFPAGK*ILLKSVASVMPNHAMSCFKILITLCKES 667
            R++ ++FSY++ R+  RIQGW EK L  AGK IL+K+VA  +P  AM CF++   LC + 
Sbjct: 1015 RSRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCFELTKDLCDQI 1074

Query: 668  HSVMSDFWWGNHTYKSTFHWAS*ERL 745
              +++ +WW N    +  HW S  +L
Sbjct: 1075 SKMIAKYWWSNQEKDNKMHWLSWNKL 1100



 Score = 68.6 bits (166), Expect(3) = 1e-30
 Identities = 32/78 (41%), Positives = 51/78 (65%)
 Frame = +1

Query: 172  SILT*KAESEGKLIGLRISRICPTISHLLFEEDLLIFYKADLNDIEAIKDILKYYEQATG 351
            S L  K E EG+L G+RI +  P++SHLLF +D LI  +A+  + + ++ IL+ YE+ +G
Sbjct: 908  SALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTILQIYEECSG 967

Query: 352  QIVNMQKSPIFFQPQHAS 405
            Q++N  KS + F P  +S
Sbjct: 968  QVINKDKSAVMFSPNTSS 985



 Score = 30.8 bits (68), Expect(3) = 1e-30
 Identities = 24/143 (16%), Positives = 59/143 (41%), Gaps = 8/143 (5%)
 Frame = +3

Query: 753  KLFKGRYFFGTNVLQAKKGSDPFWAWHGISSSIEIIKAVTRWKIGNNHQFYCLTTPFTFK 932
            ++ + +YF   +  + K+ S+  + W  I   + +++    W++G+  +      P+  +
Sbjct: 1139 RVLRAKYFPLGDCFRPKQTSNVSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWADPWIPR 1198

Query: 933  LQSSVSTLCQMSRTSLIMFA*LEP*HA---PSCLPPTRSQPSILINWS-----NEEDMLL 1088
              S      + +     +   ++P         L  T  +  +    S       ED+L 
Sbjct: 1199 GWSRKPMTPRGANLVTKVEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHVEMEDVLA 1258

Query: 1089 WHYTFSGSYSVKSGYIIAKQLSK 1157
            WH+   G ++VKS Y + +++ +
Sbjct: 1259 WHFDARGCFTVKSAYKVQREMER 1281


>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
          Length = 1594

 Score = 83.2 bits (204), Expect(3) = 2e-30
 Identities = 35/86 (40%), Positives = 54/86 (62%)
 Frame = +2

Query: 488  RNKIEVFSYIRNRLKSRIQGWSEKYLFPAGK*ILLKSVASVMPNHAMSCFKILITLCKES 667
            R++ ++FSY++ R+  RIQGW EK L  AGK IL+K+VA  +P  AM CF++   LC + 
Sbjct: 988  RSRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCFELTKDLCDQI 1047

Query: 668  HSVMSDFWWGNHTYKSTFHWAS*ERL 745
              +++ +WW N    +  HW S  +L
Sbjct: 1048 SKMIAKYWWSNQEKDNKMHWLSWNKL 1073



 Score = 68.6 bits (166), Expect(3) = 2e-30
 Identities = 32/78 (41%), Positives = 51/78 (65%)
 Frame = +1

Query: 172  SILT*KAESEGKLIGLRISRICPTISHLLFEEDLLIFYKADLNDIEAIKDILKYYEQATG 351
            S L  K E EG+L G+RI +  P++SHLLF +D LI  +A+  + + ++ IL+ YE+ +G
Sbjct: 881  SALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTILQIYEECSG 940

Query: 352  QIVNMQKSPIFFQPQHAS 405
            Q++N  KS + F P  +S
Sbjct: 941  QVINKDKSAVMFSPNTSS 958



 Score = 30.0 bits (66), Expect(3) = 2e-30
 Identities = 24/143 (16%), Positives = 59/143 (41%), Gaps = 8/143 (5%)
 Frame = +3

Query: 753  KLFKGRYFFGTNVLQAKKGSDPFWAWHGISSSIEIIKAVTRWKIGNNHQFYCLTTPFTFK 932
            ++ + +YF   +  + K+ S+  + W  I   + +++    W++G+  +      P+  +
Sbjct: 1112 RVLRAKYFPLGDCFRPKQTSNVSYTWRSIQKGLRVLQNGMIWRMGDGSKINIWADPWIPR 1171

Query: 933  LQSSVSTLCQMSRTSLIMFA*LEP*HA---PSCLPPTRSQPSILINWS-----NEEDMLL 1088
              S      + +     +   ++P         L  T  +  +    S       ED+L 
Sbjct: 1172 GWSRKPMTPRGANLVTKVEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHVEMEDVLA 1231

Query: 1089 WHYTFSGSYSVKSGYIIAKQLSK 1157
            WH+   G ++VKS Y + +++ +
Sbjct: 1232 WHFDARGCFTVKSAYKVQREMER 1254


>ref|XP_007219602.1| hypothetical protein PRUPE_ppa023113mg, partial [Prunus persica]
           gi|462416064|gb|EMJ20801.1| hypothetical protein
           PRUPE_ppa023113mg, partial [Prunus persica]
          Length = 851

 Score = 81.3 bits (199), Expect(4) = 2e-30
 Identities = 33/91 (36%), Positives = 59/91 (64%)
 Frame = +2

Query: 473 FTTSHRNKIEVFSYIRNRLKSRIQGWSEKYLFPAGK*ILLKSVASVMPNHAMSCFKILIT 652
           + ++   ++E  +Y+R+R+ S+I GW  K L  AG+ +L+KSVA+ +P + MSCF +L T
Sbjct: 313 YCSASGQEVEALTYVRDRINSKIAGWKLKLLSQAGREVLIKSVAAAIPAYPMSCFLLLAT 372

Query: 653 LCKESHSVMSDFWWGNHTYKSTFHWAS*ERL 745
           +C   ++ ++ FWWG+   +   HW S ++L
Sbjct: 373 ICNSINADLARFWWGHDGNQGKIHWHSWKKL 403



 Score = 54.7 bits (130), Expect(4) = 2e-30
 Identities = 46/148 (31%), Positives = 63/148 (42%), Gaps = 14/148 (9%)
 Frame = +3

Query: 753  KLFKGRYFFGTNVLQAKKGSDPFWAWHGISSSIEIIKAVTRWKIGNNHQFYCLTTPFTFK 932
            ++ K RYF   + L AKKG    WAW  +    +II+   RW+IGN H        +   
Sbjct: 442  RILKARYFPECSFLDAKKGGRASWAWSSLLVGRDIIEKGARWQIGNGHLVSVWKDRWLMG 501

Query: 933  LQS-SVSTLCQMSRTSLIMFA*L-------------EP*HAPSCLPPTRSQPSILINWSN 1070
              S  +S L   +R + ++ A L             EP   PS     RS P   I    
Sbjct: 502  YGSEKISPLPSCNRFTPLLVADLIDVGNRSWNISHIEPFIHPSEAMLIRSTP---IGSLA 558

Query: 1071 EEDMLLWHYTFSGSYSVKSGYIIAKQLS 1154
              D L+W    +G Y+VKSGY  A  +S
Sbjct: 559  TRDRLVWPAVKNGDYTVKSGYYHAINVS 586



 Score = 43.9 bits (102), Expect(4) = 2e-30
 Identities = 25/68 (36%), Positives = 39/68 (57%)
 Frame = +1

Query: 157 VLQKLSILT*KAESEGKLIGLRISRICPTISHLLFEEDLLIFYKADLNDIEAIKDILKYY 336
           V + LS+    +   G L G+++SR  P +SHL F +D L F +A   +  A+K I++ Y
Sbjct: 254 VSEVLSLNIINSTDTGMLRGIKLSRGGPELSHLFFADDSLFFLQATPPNCSALKSIIECY 313

Query: 337 EQATGQIV 360
             A+GQ V
Sbjct: 314 CSASGQEV 321



 Score = 21.6 bits (44), Expect(4) = 2e-30
 Identities = 18/84 (21%), Positives = 31/84 (36%)
 Frame = +1

Query: 1192 SSSSSLQKHY*NQIWSAVVPNKLKTFLSLCSWDILPVPHKLARKRFQQTPFACCEQPQRN 1371
            SSS ++       IW A +  K++ F+     + +P    L  ++  ++P          
Sbjct: 595  SSSHAVNSDVWKVIWRAHITPKIRNFMWRALTNSIPTCANLFGRKLARSP---------- 644

Query: 1372 NSASFARLSLRLCGLVQILPSHQL 1443
                    + RLCGL      H L
Sbjct: 645  --------TCRLCGLFPETVEHLL 660


>ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626455 [Citrus sinensis]
          Length = 1452

 Score = 69.7 bits (169), Expect(3) = 4e-30
 Identities = 35/93 (37%), Positives = 53/93 (56%)
 Frame = +2

Query: 488  RNKIEVFSYIRNRLKSRIQGWSEKYLFPAGK*ILLKSVASVMPNHAMSCFKILITLCKES 667
            RNK+  F  ++ ++ S+I  W  K     GK IL+K+VA  +P +AMS FK+   LC++ 
Sbjct: 853  RNKMSFFKEVKLKVTSKISSWHHKLFSAGGKEILIKAVAQAVPAYAMSVFKLPKGLCEDI 912

Query: 668  HSVMSDFWWGNHTYKSTFHWAS*ERLFSKAFQR 766
               ++ FWWG    K   HWA  + + SKA +R
Sbjct: 913  QKEIARFWWGTKKDKHGIHWARWDSM-SKAKRR 944



 Score = 58.5 bits (140), Expect(3) = 4e-30
 Identities = 36/91 (39%), Positives = 55/91 (60%)
 Frame = +1

Query: 163  QKLSILT*KAESEGKLIGLRISRICPTISHLLFEEDLLIFYKADLNDIEAIKDILKYYEQ 342
            +  S L  +AE E K+ GL+ ++   TI+HLLF +D L+F KA + D + +K I   Y +
Sbjct: 744  EAFSNLLNQAEREQKIRGLKFAQDI-TITHLLFADDSLVFSKASVADCKYLKGIFDCYAK 802

Query: 343  ATGQIVNMQKSPIFFQPQHASHSEEFSCTTS 435
            A+GQI N +KS +FF  +  + SE+ S   S
Sbjct: 803  ASGQIFNFEKSSMFFSGK--ASSEQISAIKS 831



 Score = 52.4 bits (124), Expect(3) = 4e-30
 Identities = 39/138 (28%), Positives = 61/138 (44%), Gaps = 8/138 (5%)
 Frame = +3

Query: 753  KLFKGRYFFGTNVLQAKKGSDPFWAWHGISSSIEIIKAVTRWKIGNNHQFYC-----LTT 917
            ++ K RY+  +    AK GS+P + W  I    ++IK   RW+IG+  +        +  
Sbjct: 977  RVMKARYYKNSTFWNAKVGSNPSFIWRSILWGSQVIKKGVRWRIGDGKKVLVYKDKWIPR 1036

Query: 918  PFTFKLQSSVSTLCQMSRTSLIMFA---*LEP*HAPSCLPPTRSQPSILINWSNEEDMLL 1088
            P TF+  S  +   +     LI       ++            +   IL+    EED +L
Sbjct: 1037 PATFQPISPKTLPHETVVADLIDSENKWRVDRLEQHFMKEDIEAILKILLPSGKEEDEVL 1096

Query: 1089 WHYTFSGSYSVKSGYIIA 1142
            WH+   G YSVKSGY +A
Sbjct: 1097 WHFDKKGEYSVKSGYQLA 1114