BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00018227
         (2147 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002608370.1| ribosomal protein S3 [Vitis vinifera] gi|209...   569   e-159
ref|YP_004237268.1| ribosomal protein S3 (mitochondrion) [Ricinu...   567   e-159
ref|YP_003587231.1| ribosomal protein S3 [Citrullus lanatus] gi|...   566   e-158
ref|YP_173410.1| ribosomal protein S3 [Nicotiana tabacum]             554   e-155
dbj|BAD83474.2| ribosomal protein S3 (mitochondrion) [Nicotiana ...   553   e-155
ref|YP_006666137.1| ribosomal protein S3 (mitochondrion) [Malus ...   550   e-154
dbj|BAO50922.1| ribosomal protein S3 (mitochondrion) [Hevea bras...   549   e-153
ref|YP_005090476.1| ribosomal protein S3 (mitochondrion) [Lotus ...   548   e-153
ref|YP_007516919.1| ribosomal protein S3 (mitochondrion) [Glycin...   548   e-153
sp|Q04716.1|RT03_PETHY RecName: Full=Ribosomal protein S3, mitoc...   548   e-153
gb|AGC78893.1| ribosomal protein S3 (mitochondrion) [Vicia faba]      547   e-153
ref|YP_003587365.1| ribosomal protein S3 [Cucurbita pepo] gi|259...   546   e-152
ref|YP_008802511.1| ribosomal protein S3 (mitochondrion) [Asclep...   545   e-152
sp|P27754.2|RT03_OENBE RecName: Full=Ribosomal protein S3, mitoc...   545   e-152
gb|AGC79006.1| ribosomal protein S3 (mitochondrion) [Vicia faba]      541   e-151
ref|YP_004222806.1| ribosomal protein S3 [Vigna radiata] gi|3082...   538   e-150
gb|ABY55191.1| ribosomal protein S3 [Bambusa oldhamii] gi|340748...   536   e-149
emb|CBJ23369.1| ribosomal protein S3 [Beta vulgaris subsp. marit...   534   e-149
dbj|BAD66747.1| ribosomal protein S3 [Beta vulgaris subsp. vulga...   534   e-149
ref|YP_005090420.1| rps3 gene product (mitochondrion) [Boea hygr...   533   e-148

>ref|YP_002608370.1| ribosomal protein S3 [Vitis vinifera] gi|209954167|emb|CAQ77614.1|
            ribosomal protein S3 [Vitis vinifera]
            gi|239764764|gb|ACS15233.1| ribosomal protein S3 [Vitis
            vinifera]
          Length = 563

 Score =  569 bits (1467), Expect = e-159
 Identities = 321/551 (58%), Positives = 386/551 (70%), Gaps = 46/551 (8%)
 Frame = -1

Query: 1865 MNRTPDSSWFSDYYYDKLVYQDVNMRSYFASIRPPTANTNGFRLARCVILHFPKRTSIQL 1686
            +NR+ DSSWFSDYYY K VYQDVN+RSYF SIRPPT  T GFRL RC+ILHFPKRT I  
Sbjct: 14   LNRSSDSSWFSDYYYGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHF 73

Query: 1685 FLPRRPPR-RVNERSKAGKKKGRWWALRKVRPIAI---------------GKGSG---EG 1563
            FLPRRP   +  E+S+ GK+KGRWWA  KV PI                 G+G+G   E 
Sbjct: 74   FLPRRPRGLKRREKSRPGKEKGRWWAFGKVGPIGCLHSSDGTEEERNEVRGRGAGKRVES 133

Query: 1562 ERVQQSKQIEEVRIWPKKKQRSYGYHDRXXXXXXXXXXXXLGVMRPSS-----KCSGVAN 1398
             R+   ++  E RIWPKKKQR YGYHD+              ++R S      K +GV N
Sbjct: 134  IRLDDREKQNERRIWPKKKQR-YGYHDQSPSIKKNLSK----LLRVSGAFKHLKYAGVVN 188

Query: 1397 DLTFLLEHDISFRQTKLFKFFFPNKSHASLASQSQKILSAPVPS---SLDYTVMQYLLHT 1227
            D+ FL+E+D SFR+TKLFKFFFP KS +     +  IL   +P+   SL+Y+VMQYLL+T
Sbjct: 189  DIAFLIENDDSFRKTKLFKFFFPKKSRSD--GPTSHILKRTLPAVRPSLNYSVMQYLLNT 246

Query: 1226 KNQIPFDPIRFLNHFVARPVTAQPSFKGINDLDG----KRIRSLITFFVENSTSEKN--- 1068
            KNQI FD +  LNHFVA P  A+PS  G  +  G    KRIRS I FFVE+STSEK    
Sbjct: 247  KNQIHFDSVVVLNHFVA-PGVAEPSTMGGANAQGRSLDKRIRSRIAFFVESSTSEKKCLA 305

Query: 1067 ----RLTHLISKANDLRLSAGATTTRPTISP----TFFFPKDGLGVYNKPSFEDAREQLL 912
                RLTH I +ANDLR  AG T T  ++ P    TFFFP+DG+GVYN   FEDAREQLL
Sbjct: 306  EAKKRLTHFIRQANDLRF-AGTTKTTISLFPFFGATFFFPRDGVGVYNNLFFEDAREQLL 364

Query: 911  SQLRTKCWNLMGKSEVMELVDKFTQQGENGMQGLIEAVEMMTMIILKNRRIPYGYNTYLN 732
             QLR KCWNLMGK +VMEL+DKF   G  G+  LI+ +EMM  IIL+NRRIPYGYN+YLN
Sbjct: 365  GQLRIKCWNLMGKDKVMELIDKFIDLG--GIGELIKGIEMMIEIILRNRRIPYGYNSYLN 422

Query: 731  EVAKMRSFLSDRTHTNTILESVKVKSNYQSASLIAQDIALQMKKKSRSFPSIFNQIVREM 552
            EV KMRS LS+RT+TNT++ESVK+KS YQSAS IAQDI+ Q + K+RSF SIF++IV+++
Sbjct: 423  EVKKMRSLLSNRTNTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDI 482

Query: 551  P----KGVQGIRVCASGRIGGAEIAKVECAKFGKTSRNVFNQKVDYAFAEAATRYGTTGV 384
            P    KGV+GIR+C SGR  GAEIA+ EC K+GKTSRNVFNQK+DYA AE +TRYG +GV
Sbjct: 483  PLVMKKGVEGIRICCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGV 542

Query: 383  KVWISYSKKKE 351
            KVWISYSKKK+
Sbjct: 543  KVWISYSKKKK 553


>ref|YP_004237268.1| ribosomal protein S3 (mitochondrion) [Ricinus communis]
            gi|322394275|gb|ADW96032.1| ribosomal protein S3
            (mitochondrion) [Ricinus communis]
          Length = 563

 Score =  567 bits (1462), Expect = e-159
 Identities = 316/547 (57%), Positives = 386/547 (70%), Gaps = 43/547 (7%)
 Frame = -1

Query: 1865 MNRTPDSSWFSDYYYDKLVYQDVNMRSYFASIRPPTANTNGFRLARCVILHFPKRTSIQL 1686
            +NR+ DSS FSDYYY K VYQDVN+RSYF SIRPPT  T GFRL RC+ILHFPKRT I  
Sbjct: 14   LNRSSDSSRFSDYYYGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFINF 73

Query: 1685 FLPRRPPR-RVNERSKAGKKKGRWWALRKVRPIAI---------------GKGSG---EG 1563
            FL RRP R +  E+++ GK+KGRWW   KV PI                 G+G+G   E 
Sbjct: 74   FLSRRPRRLKRREKTRPGKEKGRWWTFGKVGPIRCLHSSDNTEEERNEVRGRGAGKRVES 133

Query: 1562 ERVQQSKQIEEVRIWPKKKQRSYGYHDRXXXXXXXXXXXXL--GVMRPSSKCSGVANDLT 1389
             R+   ++  E+RIWPKKKQR YGYHDR               G  +   K +GV ND+ 
Sbjct: 134  IRLDDREKENEIRIWPKKKQR-YGYHDRSPSIKKNLSKSLRVSGAFK-HPKYAGVVNDIA 191

Query: 1388 FLLEHDISFRQTKLFKFFFPNKSHASLASQSQKILSAPVPS---SLDYTVMQYLLHTKNQ 1218
            FL+E+D SFR+TKLFKFFFP KS +     +  +L   +P+   SL+Y+VMQYLL+TKNQ
Sbjct: 192  FLIENDDSFRKTKLFKFFFPKKSRSD--GPTSHLLKRTLPAVCLSLNYSVMQYLLNTKNQ 249

Query: 1217 IPFDPIRFLNHFVARPVTAQPSFKGINDLDG----KRIRSLITFFVENSTSEKN------ 1068
            I FDP+  LNHFVA P  A+PS  G  +  G    KRIRS I FFVE+STSEKN      
Sbjct: 250  IHFDPVVVLNHFVA-PGVAEPSTMGGANAQGRSLDKRIRSRIAFFVESSTSEKNCLSEAK 308

Query: 1067 -RLTHLISKANDLRLSAGATTTRPTISP----TFFFPKDGLGVYNKPSFEDAREQLLSQL 903
             RLTH I +ANDLR  AG T T  ++ P    TFFFP+DG+GVYN   FEDAREQLL QL
Sbjct: 309  KRLTHFIRQANDLRF-AGTTKTTISLFPFFGATFFFPRDGVGVYNNLFFEDAREQLLGQL 367

Query: 902  RTKCWNLMGKSEVMELVDKFTQQGENGMQGLIEAVEMMTMIILKNRRIPYGYNTYLNEVA 723
            R KCWNLMGK +VMEL++KF   G  G+  LI+ +EMM  IIL+NRRIPYGYN+YLNE+ 
Sbjct: 368  RIKCWNLMGKDKVMELIEKFINLG--GIGELIKGIEMMIEIILRNRRIPYGYNSYLNEMK 425

Query: 722  KMRSFLSDRTHTNTILESVKVKSNYQSASLIAQDIALQMKKKSRSFPSIFNQIVREMP-- 549
            KMRS LS+RT+TNT++ES+K+KS YQSAS IAQDI+ Q++ K+RSF SIF++IV+++P  
Sbjct: 426  KMRSLLSNRTNTNTLIESIKMKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLV 485

Query: 548  --KGVQGIRVCASGRIGGAEIAKVECAKFGKTSRNVFNQKVDYAFAEAATRYGTTGVKVW 375
              KGV+GIR+C SGR+ GAEIA+ EC K+GKTSRNVFNQK+DYA AE +TRYG +GVKVW
Sbjct: 486  MKKGVEGIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVW 545

Query: 374  ISYSKKK 354
            ISYSKKK
Sbjct: 546  ISYSKKK 552


>ref|YP_003587231.1| ribosomal protein S3 [Citrullus lanatus] gi|259156790|gb|ACV96652.1|
            ribosomal protein S3 [Citrullus lanatus]
          Length = 563

 Score =  567 bits (1460), Expect = e-158
 Identities = 314/551 (56%), Positives = 384/551 (69%), Gaps = 46/551 (8%)
 Frame = -1

Query: 1865 MNRTPDSSWFSDYYYDKLVYQDVNMRSYFASIRPPTANTNGFRLARCVILHFPKRTSIQL 1686
            +NR+ DSSWFSDYYY KL+YQDVN+RSYF SIRPPT  T GFRL RC+ILHFPKRT I  
Sbjct: 14   LNRSSDSSWFSDYYYGKLLYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHF 73

Query: 1685 FLPRRPPR-RVNERSKAGKKKGRWWALRKVRPIAIGKGSGEGE----------------- 1560
            FLPRRP R +  E+SK GK+KGRWWA  KV PI     S + E                 
Sbjct: 74   FLPRRPRRLKRREKSKPGKEKGRWWAFGKVGPIGCLHSSDDTEEERNEVRGREAEKRVES 133

Query: 1559 -RVQQSKQIEEVRIWPKKKQRSYGYHDRXXXXXXXXXXXXLGVMRPSS-----KCSGVAN 1398
             R+   ++  E+RIWPKKKQR YGYHDR              ++R S      K +GV N
Sbjct: 134  IRLDDREKQNEIRIWPKKKQR-YGYHDRSPSIKKNLSK----LLRVSGAFKHPKYAGVVN 188

Query: 1397 DLTFLLEHDISFRQTKLFKFFFPNKSHASLASQSQKILSAPVPS---SLDYTVMQYLLHT 1227
            D+ FL+E+D SFR+TKLFKFFFP KS +     +  +L   +P+   SL+Y VMQYLL+T
Sbjct: 189  DIAFLIENDDSFRKTKLFKFFFPKKSRSD--GPTSHLLKRTLPAVRPSLNYLVMQYLLNT 246

Query: 1226 KNQIPFDPIRFLNHFVARPVTAQPSFKGINDLDG----KRIRSLITFFVENSTSEKN--- 1068
            KN++ FDP+  LNHFVA P  A+PS  G  +  G    KRIRS I FFVE+ TSEK    
Sbjct: 247  KNKMHFDPVVVLNHFVA-PGVAEPSTMGGANTQGRSLDKRIRSRIAFFVESLTSEKKCLA 305

Query: 1067 ----RLTHLISKANDLRLSAGATTTRPTISP----TFFFPKDGLGVYNKPSFEDAREQLL 912
                RLTH I +ANDLR  AG T T  ++ P    TFFFP+DG+G+Y    FED REQLL
Sbjct: 306  EAKKRLTHFIRQANDLRF-AGTTKTTISLFPFFGATFFFPRDGVGMYKNLFFEDTREQLL 364

Query: 911  SQLRTKCWNLMGKSEVMELVDKFTQQGENGMQGLIEAVEMMTMIILKNRRIPYGYNTYLN 732
             QLR KCWNLMGK +V+EL++KF   G  G+  LI+ +EMM  IIL+NRRIPYGYN+YLN
Sbjct: 365  GQLRIKCWNLMGKDKVIELIEKFIDLG--GIGELIKGIEMMIEIILRNRRIPYGYNSYLN 422

Query: 731  EVAKMRSFLSDRTHTNTILESVKVKSNYQSASLIAQDIALQMKKKSRSFPSIFNQIVREM 552
            EV KMRS LS+RT TNT++ESVK+KS YQSASLIAQDI+ Q++ K+RSF SIF++IV+++
Sbjct: 423  EVKKMRSLLSNRTKTNTLIESVKIKSVYQSASLIAQDISFQLRNKTRSFRSIFSKIVKDI 482

Query: 551  P----KGVQGIRVCASGRIGGAEIAKVECAKFGKTSRNVFNQKVDYAFAEAATRYGTTGV 384
            P    KGV+GIR+C SGR+ GAEIA+ EC K+GKTSRNVFNQK+DYA AE +TRYG +GV
Sbjct: 483  PLVMKKGVEGIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGV 542

Query: 383  KVWISYSKKKE 351
            KVWISY KKK+
Sbjct: 543  KVWISYKKKKK 553


>ref|YP_173410.1| ribosomal protein S3 [Nicotiana tabacum]
          Length = 563

 Score =  554 bits (1428), Expect = e-155
 Identities = 311/546 (56%), Positives = 377/546 (69%), Gaps = 41/546 (7%)
 Frame = -1

Query: 1865 MNRTPDSSWFSDYYYDKLVYQDVNMRSYFASIRPPTANTNGFRLARCVILHFPKRTSIQL 1686
            +NR+ DSSWFSDYYY K VYQDVN+RSYF SIRPPT  T GFRL RC+I+HFPKRT I  
Sbjct: 14   LNRSSDSSWFSDYYYGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIIIHFPKRTFIHF 73

Query: 1685 FLPRRPPR-RVNERSKAGKKKGRWWALRKVRPIAI---------------GKGSG---EG 1563
            FLPRRP R +  E+S+  K+KGRW A  KV PI                 G+G+G   E 
Sbjct: 74   FLPRRPRRLKRREKSRPVKEKGRWGAFGKVGPIGCLHSSDGTEEERNEVRGRGAGKRVES 133

Query: 1562 ERVQQSKQIEEVRIWPKKKQRSYGYHDRXXXXXXXXXXXXL--GVMRPSSKCSGVANDLT 1389
             R+   ++  E+RIWPKKKQ  YGYHDR               G  +   K +G+ ND+ 
Sbjct: 134  IRLDDREKQNEIRIWPKKKQ-GYGYHDRSPSIKKNLSKSLRVSGAFK-HPKYAGIENDIA 191

Query: 1388 FLLEHDISFRQTKLFKFFFPNKSHASLASQSQKILSAP-VPSSLDYTVMQYLLHTKNQIP 1212
            FL+E+D SFR+T LFKFFFP KS +   +      + P V  SL+Y+VMQYLL+TKN+I 
Sbjct: 192  FLIENDDSFRKTNLFKFFFPKKSRSDRPTSHLLKRTLPAVRPSLNYSVMQYLLNTKNKIH 251

Query: 1211 FDPIRFLNHFVARPVTAQPSFKGINDLDG----KRIRSLITFFVENSTSEKN-------R 1065
            FDP+  LNHFVA P  A+PS  G  +  G    KRIRS I FFVE+STSEK        R
Sbjct: 252  FDPVVVLNHFVA-PGVAEPSTMGGANAQGRSLDKRIRSCIAFFVESSTSEKKCLAEAKKR 310

Query: 1064 LTHLISKANDLRLSAGATTTRPTISP----TFFFPKDGLGVYNKPSFEDAREQLLSQLRT 897
            +TH I +ANDLR  AG T T  ++ P    TFFFP+DG+GVYN   FEDAREQLL QLR 
Sbjct: 311  VTHFIRQANDLRF-AGTTKTTISLFPFFGATFFFPRDGVGVYNNLFFEDAREQLLGQLRI 369

Query: 896  KCWNLMGKSEVMELVDKFTQQGENGMQGLIEAVEMMTMIILKNRRIPYGYNTYLNEVAKM 717
            KCWNLMGK +VMEL++KF      G   LI  +EMM  IIL+NRRIPYGYN YLNEV KM
Sbjct: 370  KCWNLMGKDKVMELIEKFIDLNRIGE--LIRGIEMMIEIILRNRRIPYGYNYYLNEVKKM 427

Query: 716  RSFLSDRTHTNTILESVKVKSNYQSASLIAQDIALQMKKKSRSFPSIFNQIVREMP---- 549
            RS L +RT+TNT++ESVK+KS YQSAS IAQDI+ Q + K+RSF SIF++IV+++P    
Sbjct: 428  RSLLYNRTNTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMK 487

Query: 548  KGVQGIRVCASGRIGGAEIAKVECAKFGKTSRNVFNQKVDYAFAEAATRYGTTGVKVWIS 369
            KGV+GIR+C SGR+ GAEIA+ EC K+GKTSRNVFNQK+DYA AE +TRYG +GVKVWIS
Sbjct: 488  KGVEGIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWIS 547

Query: 368  YSKKKE 351
            YSKKK+
Sbjct: 548  YSKKKK 553


>dbj|BAD83474.2| ribosomal protein S3 (mitochondrion) [Nicotiana tabacum]
          Length = 563

 Score =  553 bits (1426), Expect = e-155
 Identities = 312/549 (56%), Positives = 378/549 (68%), Gaps = 44/549 (8%)
 Frame = -1

Query: 1865 MNRTPDSSWFSDYYYDKLVYQDVNMRSYFASIRPPTANTNGFRLARCVILHFPKRTSIQL 1686
            +NR+ DSSWFSDYYY KLVYQDVN+RSYF SIRPPT  T GFRL RC+I+HFPKRT I  
Sbjct: 14   LNRSSDSSWFSDYYYGKLVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIIIHFPKRTFIHF 73

Query: 1685 FLPRRPPR-RVNERSKAGKKKGRWWALRKVRPIAI---------------GKGSG---EG 1563
            FLPRRP R +  E+S+  K+KGRW A  KV PI                 G+G+G   E 
Sbjct: 74   FLPRRPRRLKRREKSRPVKEKGRWGAFGKVGPIGCLHSSDGTEEERNEVRGRGAGKRVES 133

Query: 1562 ERVQQSKQIEEVRIWPKKKQRSYGYHDRXXXXXXXXXXXXLGVMRPSS-----KCSGVAN 1398
             R+   ++  E+RIWPKKKQ  YGYHDR              ++R S      K +G+ N
Sbjct: 134  IRLDDREKQNEIRIWPKKKQ-GYGYHDRSPSIKKNLSK----LLRVSGAFKHPKYAGIEN 188

Query: 1397 DLTFLLEHDISFRQTKLFKFFFPNKSHASLASQSQKILSAP-VPSSLDYTVMQYLLHTKN 1221
            D+ FL+E+D SFR+T LFKFFFP KS +   +      + P V  SL+Y VMQYLL+TKN
Sbjct: 189  DIAFLIENDDSFRKTNLFKFFFPKKSRSDRPTSHLLKRTLPAVRPSLNYLVMQYLLNTKN 248

Query: 1220 QIPFDPIRFLNHFVARPVTAQPSFKGINDLDG----KRIRSLITFFVENSTSEKN----- 1068
            +I FDP+  LNHFVA P  A+PS  G  +  G    KRIRS I FFVE+STSEK      
Sbjct: 249  KIHFDPVVVLNHFVA-PGVAEPSTMGGANAQGRSLDKRIRSCIAFFVESSTSEKKCLAEA 307

Query: 1067 --RLTHLISKANDLRLSAGATTTRPTISP----TFFFPKDGLGVYNKPSFEDAREQLLSQ 906
              R+TH I +ANDLR  AG T T  ++ P    TFFF +DG+GVYN   FEDAREQLL Q
Sbjct: 308  KKRVTHFIRQANDLRF-AGTTKTTISLFPFFGATFFFLRDGVGVYNNLFFEDAREQLLGQ 366

Query: 905  LRTKCWNLMGKSEVMELVDKFTQQGENGMQGLIEAVEMMTMIILKNRRIPYGYNTYLNEV 726
            LR KCWNLMGK +VMEL++KF      G   LI  +EMM  IIL+NRRIPYGYN YLNEV
Sbjct: 367  LRIKCWNLMGKDKVMELIEKFIDLNRIGE--LIRGIEMMIEIILRNRRIPYGYNYYLNEV 424

Query: 725  AKMRSFLSDRTHTNTILESVKVKSNYQSASLIAQDIALQMKKKSRSFPSIFNQIVREMP- 549
             KMRS L +RT+TNT++ESVK+KS YQSASLIAQDI+ Q++ K+RSF SIF++IV+++P 
Sbjct: 425  KKMRSLLYNRTNTNTLIESVKIKSVYQSASLIAQDISFQLRNKTRSFRSIFSKIVKDIPL 484

Query: 548  ---KGVQGIRVCASGRIGGAEIAKVECAKFGKTSRNVFNQKVDYAFAEAATRYGTTGVKV 378
               KGV+GIR+C SGR+ GAEIA+ EC K+GKTS NVFNQK+DYA AE +TRYG  GVKV
Sbjct: 485  VMKKGVEGIRICCSGRLEGAEIARTECGKYGKTSCNVFNQKIDYASAEVSTRYGILGVKV 544

Query: 377  WISYSKKKE 351
            WISYSKKK+
Sbjct: 545  WISYSKKKK 553


>ref|YP_006666137.1| ribosomal protein S3 (mitochondrion) [Malus domestica]
            gi|401661940|emb|CBX33400.1| ribosomal protein S3
            (mitochondrion) [Malus domestica]
          Length = 554

 Score =  550 bits (1418), Expect = e-154
 Identities = 308/548 (56%), Positives = 374/548 (68%), Gaps = 42/548 (7%)
 Frame = -1

Query: 1865 MNRTPDSSWFSDYYYDKLVYQDVNMRSYFASIRPPTANTNGFRLARCVILHFPKRTSIQL 1686
            +NR+ DSSWFSDYYY KLVYQDVN+RSYF SIRPPT  T GFRL  C+ILHFPKRT I  
Sbjct: 14   LNRSSDSSWFSDYYYGKLVYQDVNLRSYFGSIRPPTRLTFGFRLGTCIILHFPKRTFIHF 73

Query: 1685 FLPRRPPR-RVNERSKAGKKKGRWWALRKVRPIAI---------------GKGSG---EG 1563
            FLPRRP R +  E+S+ GK+KGRWWA  KV PI                 G+GSG   E 
Sbjct: 74   FLPRRPRRLKRREKSRPGKEKGRWWAFGKVGPIGCLHSSGDTEEERNEVRGRGSGKRVES 133

Query: 1562 ERVQQSKQIEEVRIWPKKKQRSYGYHDRXXXXXXXXXXXXLGVMRPSS--KCSGVANDLT 1389
             R+   ++  E+RIWPKKKQR YGYHDR              V R     K +GV N + 
Sbjct: 134  IRLDDREKQNEIRIWPKKKQR-YGYHDRSPSIKKNLSKSLR-VSRAFKHPKYAGVVNGIA 191

Query: 1388 FLLEHDISFRQTKLFKFFFPNKSHASLASQSQKILSAPVPS---SLDYTVMQYLLHTKNQ 1218
            FL+E+D  FR+TKLFKFF P KS +     +  +L   +P+   S +Y+VMQYLL+TKNQ
Sbjct: 192  FLIENDDPFRKTKLFKFFLPKKSRSD--GSTSHLLKRTLPAVRPSFNYSVMQYLLNTKNQ 249

Query: 1217 IPFDPIRFLNHFVARPVTAQPSFKGINDLDG----KRIRSLITFFVENSTSEKN------ 1068
            + FDP+  LNHFVA P  A+PS  G  +  G    KRIRS I  FVE+STS+K       
Sbjct: 250  MHFDPVVVLNHFVA-PGVAEPSTMGGANAQGRSLDKRIRSRIALFVESSTSDKKCLAEAK 308

Query: 1067 -RLTHLISKANDLRLSAGATTTRPTI---SPTFFFPKDGLGVYNKPSFEDAREQLLSQLR 900
             RLT  I +ANDLR +    TT P       TFFFP+DG+G+YN   FEDAREQLL QLR
Sbjct: 309  KRLTRFIRQANDLRFAGTTKTTIPLFPFFGATFFFPRDGVGMYNNLFFEDAREQLLGQLR 368

Query: 899  TKCWNLMGKSEVMELVDKFTQQGENGMQGLIEAVEMMTMIILKNRRIPYGYNTYLNEVAK 720
             KCWNLMGK +VMEL++KF      G   LI  +EMM  IIL+NR+IP GYN+YLNEV K
Sbjct: 369  IKCWNLMGKDKVMELIEKFIDLDRIGE--LIRGIEMMIEIILRNRQIPCGYNSYLNEVKK 426

Query: 719  MRSFLSDRTHTNTILESVKVKSNYQSASLIAQDIALQMKKKSRSFPSIFNQIVREMP--- 549
            MRS LS+RT+TNT++ESVK+KS YQSAS IAQDI+ Q++ K+RSF SIF++IV+++P   
Sbjct: 427  MRSLLSNRTNTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVM 486

Query: 548  -KGVQGIRVCASGRIGGAEIAKVECAKFGKTSRNVFNQKVDYAFAEAATRYGTTGVKVWI 372
             KGV+GIR+C SGR  GAEIA+ EC K+GKTSRNVFNQK+DYA A+ +TRYG  GVKVWI
Sbjct: 487  KKGVEGIRICCSGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAKVSTRYGILGVKVWI 546

Query: 371  SYSKKKEM 348
            SYSKKK +
Sbjct: 547  SYSKKKSI 554


>dbj|BAO50922.1| ribosomal protein S3 (mitochondrion) [Hevea brasiliensis]
          Length = 586

 Score =  549 bits (1415), Expect = e-153
 Identities = 314/572 (54%), Positives = 385/572 (67%), Gaps = 68/572 (11%)
 Frame = -1

Query: 1865 MNRTPDSSWFSD-----------------------YYYDKLVYQDVNMRSYFASIRPPTA 1755
            +NR+ DSS FS+                       YYY K VYQDVN+RSYF SIRPPT 
Sbjct: 14   LNRSSDSSRFSEMEAPPIKQERSGSFHGGITIDSIYYYGKSVYQDVNLRSYFGSIRPPTR 73

Query: 1754 NTNGFRLARCVILHFPKRTSIQLFLPRRPPR-RVNERSKAGKKKGRWWALRKVRPIAI-- 1584
             T GFRL RC+ILHFPKRT I  FLPRRP R +  E+++ GK+KGRWW   KV PI    
Sbjct: 74   LTFGFRLGRCIILHFPKRTFINFFLPRRPRRLKRREKTRPGKEKGRWWTFGKVGPIRCLH 133

Query: 1583 -------------GKGSG---EGERVQQSKQIEEVRIWPKKKQRSYGYHDRXXXXXXXXX 1452
                         G+G+G   E  R+   ++  E+RIWPKKKQ  YGYHDR         
Sbjct: 134  SSDNTEEERKEVRGRGAGKRVESIRLDDREKENEIRIWPKKKQ-CYGYHDRSPSIKKNLS 192

Query: 1451 XXXL--GVMRPSSKCSGVANDLTFLLEHDISFRQTKLFKFFFPNKSHASLASQSQKILSA 1278
                  G  +   K +GV ND+ FL+E+D SFR+TKLFKFFFP KS +     +  +L  
Sbjct: 193  KSLRVSGAFK-HPKYAGVVNDIAFLIENDDSFRKTKLFKFFFPKKSRSD--GPTSHLLKR 249

Query: 1277 PVPS---SLDYTVMQYLLHTKNQIPFDPIRFLNHFVARPVTAQPSFKGINDLDG----KR 1119
             +P+   SL+Y+VMQYLL+TKNQI FDP+  LNHFVA P  A+PS  G  +  G    KR
Sbjct: 250  TLPAVCLSLNYSVMQYLLNTKNQIHFDPVVVLNHFVA-PGVAEPSTMGGANAQGRSLDKR 308

Query: 1118 IRSLITFFVENSTSEKN-------RLTHLISKANDLRLSAGATTTRPTIS------PTFF 978
            IRS I FFVE+STSEK        RLTH I +ANDLR    A TT+ TIS       TFF
Sbjct: 309  IRSRIAFFVESSTSEKKCLSEAKKRLTHFIREANDLRF---AETTKTTISLFPFFGATFF 365

Query: 977  FPKDGLGVYNKPSFEDAREQLLSQLRTKCWNLMGKSEVMELVDKFTQQGENGMQGLIEAV 798
            FP+DG+GVYN   FEDAREQLL QLR KCWNLMGK +VMEL++KF   G  G+  LI+ +
Sbjct: 366  FPRDGVGVYNNLFFEDAREQLLGQLRIKCWNLMGKDKVMELIEKFINLG--GIGELIKGI 423

Query: 797  EMMTMIILKNRRIPYGYNTYLNEVAKMRSFLSDRTHTNTILESVKVKSNYQSASLIAQDI 618
            EMM  IIL+NRRIPYGYN+YLNE+ KMRS LS+RT+TNT++ESVK++S +QSAS IAQDI
Sbjct: 424  EMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNTNTLIESVKIQSVFQSASSIAQDI 483

Query: 617  ALQMKKKSRSFPSIFNQIVREMP----KGVQGIRVCASGRIGGAEIAKVECAKFGKTSRN 450
            + Q++ K+RSF SIF++IV+++P    KGV+GIR+C SGR+ GAEIA+ EC K+GKTSRN
Sbjct: 484  SFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICCSGRLEGAEIARTECGKYGKTSRN 543

Query: 449  VFNQKVDYAFAEAATRYGTTGVKVWISYSKKK 354
            VFNQK+DYA AE +TRYG +GVKVWISYSKKK
Sbjct: 544  VFNQKIDYAPAEVSTRYGISGVKVWISYSKKK 575


>ref|YP_005090476.1| ribosomal protein S3 (mitochondrion) [Lotus japonicus]
            gi|357197340|gb|AET62936.1| ribosomal protein S3
            (mitochondrion) [Lotus japonicus]
          Length = 563

 Score =  548 bits (1412), Expect = e-153
 Identities = 308/544 (56%), Positives = 372/544 (68%), Gaps = 40/544 (7%)
 Frame = -1

Query: 1865 MNRTPDSSWFSDYYYDKLVYQDVNMRSYFASIRPPTANTNGFRLARCVILHFPKRTSIQL 1686
            +NR+ DSSWFSDYYY KLVYQDVN+RSYF SIRPP   T GFRL RC++++FPKRT I  
Sbjct: 14   LNRSSDSSWFSDYYYCKLVYQDVNLRSYFGSIRPPARLTFGFRLGRCILINFPKRTFIHF 73

Query: 1685 FLPRRPPR-RVNERSKAGKKKGRWWALRKVRPIAI---------------GKGSG---EG 1563
            FLPRRP R +  E+S+ GK+KGRWWA  KV PI                 G+ +G   E 
Sbjct: 74   FLPRRPRRLKRREKSRPGKEKGRWWAFGKVGPIGCLHSSDNTEEERNEVRGRRAGKRVES 133

Query: 1562 ERVQQSKQIEEVRIWPKKKQRSYGYHDRXXXXXXXXXXXXL-GVMRPSSKCSGVANDLTF 1386
             R+   ++  E+RIWPKKKQR YGYHDR              G      K +G  ND+ F
Sbjct: 134  IRLDDREKQNEIRIWPKKKQR-YGYHDRSPSIKKNLSKLLRVGGAFKHPKYAGAVNDIAF 192

Query: 1385 LLEHDISFRQTKLFKFFFPNKSHAS-LASQSQKILSAPVPSSLDYTVMQYLLHTKNQIPF 1209
            L+E+D SFR+TK FKFFFP KS ++   S   K     V  SL+Y VMQYLL+ KNQI F
Sbjct: 193  LIENDDSFRKTKFFKFFFPKKSRSNGPTSHLFKRTLPAVRPSLNYLVMQYLLNRKNQIHF 252

Query: 1208 DPIRFLNHFVARPVTAQPSFKGIN----DLDGKRIRSLITFFVENSTSEKN-------RL 1062
            DP+  LNHFVA  V    + +G N     LD  RIRS I FFVE+STSEK        RL
Sbjct: 253  DPVVVLNHFVAPGVAEPSTMRGANAQGRSLDN-RIRSRIAFFVESSTSEKKCLAEAKKRL 311

Query: 1061 THLISKANDLRLSAGATTTRPTISP----TFFFPKDGLGVYNKPSFEDAREQLLSQLRTK 894
            TH I  ANDLR  AG T T  ++ P    TFFF +D +G+YN   FEDARE LL QLR K
Sbjct: 312  THFIRLANDLRF-AGTTKTTISLFPFFGATFFFLRDRVGIYNHLFFEDAREPLLGQLRIK 370

Query: 893  CWNLMGKSEVMELVDKFTQQGENGMQGLIEAVEMMTMIILKNRRIPYGYNTYLNEVAKMR 714
            CWNLMGK +VMEL++KF   G  G    I+ +EMM  IIL+NRRIPYGYN+YLNEV KMR
Sbjct: 371  CWNLMGKDKVMELIEKFIDLGRIGEW--IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMR 428

Query: 713  SFLSDRTHTNTILESVKVKSNYQSASLIAQDIALQMKKKSRSFPSIFNQIVREMP----K 546
            S LS+RT+TNT++ESVK+KS YQSASLIAQDI+ Q++KK+RSF SIF++IV+++P    K
Sbjct: 429  SLLSNRTNTNTLIESVKIKSVYQSASLIAQDISFQLRKKTRSFRSIFSRIVKDIPLVMKK 488

Query: 545  GVQGIRVCASGRIGGAEIAKVECAKFGKTSRNVFNQKVDYAFAEAATRYGTTGVKVWISY 366
            GV+GIR+C SGR+ GAEIA+ EC K+GKTS NVFNQK+DYA AE +TRYG  GVKVWISY
Sbjct: 489  GVEGIRICCSGRLEGAEIARTECGKYGKTSCNVFNQKIDYASAEVSTRYGILGVKVWISY 548

Query: 365  SKKK 354
            S+KK
Sbjct: 549  SQKK 552


>ref|YP_007516919.1| ribosomal protein S3 (mitochondrion) [Glycine max]
            gi|403311576|gb|AFR34324.1| ribosomal protein S3
            (mitochondrion) [Glycine max]
          Length = 562

 Score =  548 bits (1411), Expect = e-153
 Identities = 312/545 (57%), Positives = 375/545 (68%), Gaps = 41/545 (7%)
 Frame = -1

Query: 1865 MNRTPDSSWFSDYYYDKLVYQDVNMRSYFASIRPPTANTNGFRLARCVILHFPKRTSIQL 1686
            +NR+ DSS FSDYYY KLVYQDVN+RSYF SIRPP   T GFRL RC+++HFPKRT I  
Sbjct: 14   LNRSSDSSRFSDYYYGKLVYQDVNLRSYFGSIRPPARLTFGFRLGRCILIHFPKRTFIHF 73

Query: 1685 FLPRRPPR-RVNERSKAGKKKGRWWALRKVRPIAI---------------GKGSG---EG 1563
            FLPRRP R +  ++S+ GK+KGRWWA  KV PI                 G+ +G   E 
Sbjct: 74   FLPRRPRRLKRRKKSRPGKEKGRWWAFGKVGPIGCLHSSDNTEEERNEVRGRRAGKRVES 133

Query: 1562 ERVQQSKQIEEVRIWPKKKQRSYGYHDRXXXXXXXXXXXXL--GVMRPSSKCSGVANDLT 1389
             R+   ++  E+RIWPKKKQR YGYHDR               G  +   K +GV ND+ 
Sbjct: 134  IRLDDREKQNEIRIWPKKKQR-YGYHDRSPSIKKNLSKSLRVSGAFK-HPKYAGVVNDIA 191

Query: 1388 FLLEHDISFRQTKLFKFFFPNKSHAS-LASQSQKILSAPVPSSLDYTVMQYLLHTKNQIP 1212
            FL+E+D SF++ KLFK FFP KS +    S   K     V  SL+Y+VMQYLL+ KNQ+ 
Sbjct: 192  FLIENDDSFKKRKLFKLFFPKKSRSDGPTSHLFKRTLPAVRPSLNYSVMQYLLNRKNQMH 251

Query: 1211 FDPIRFLNHFVARPVTAQPSFKGI----NDLDGKRIRSLITFFVENSTSEKN-------R 1065
            FDP+  LNHFVA P  A+PS  G       LD KRIRS I FFVE+STSEK        R
Sbjct: 252  FDPVVVLNHFVA-PGVAEPSTMGGAKQGRGLD-KRIRSRIAFFVESSTSEKKCLAEAKKR 309

Query: 1064 LTHLISKANDLRLSAGATTTRPTISP----TFFFPKDGLGVYNKPSFEDAREQLLSQLRT 897
            LTH I  ANDLR  AG T T  ++ P    TFFFP+D +G YN  SFEDARE LL QLR 
Sbjct: 310  LTHFIRLANDLRF-AGTTKTTISLFPFFGATFFFPRDRVGFYNHLSFEDAREPLLGQLRI 368

Query: 896  KCWNLMGKSEVMELVDKFTQQGENGMQGLIEAVEMMTMIILKNRRIPYGYNTYLNEVAKM 717
            KCWNLMGK +VMEL+DKF   G  G    I+ +EMM  IIL+NRRIPYGYN+YLNEV KM
Sbjct: 369  KCWNLMGKDKVMELIDKFIDLGRIGEW--IKGIEMMIEIILRNRRIPYGYNSYLNEVKKM 426

Query: 716  RSFLSDRTHTNTILESVKVKSNYQSASLIAQDIALQMKKKSRSFPSIFNQIVREMP---- 549
            RS LS+RT+TNT++ESVK+KS YQSAS IAQDI+ Q++KK+RSF SIF++IV+++P    
Sbjct: 427  RSLLSNRTNTNTLIESVKIKSVYQSASPIAQDISFQLRKKTRSFRSIFSRIVKDIPLVMK 486

Query: 548  KGVQGIRVCASGRIGGAEIAKVECAKFGKTSRNVFNQKVDYAFAEAATRYGTTGVKVWIS 369
            KGV+GIR+C SGR  GAEIA+ EC K+GKTSRNVFNQK+DYA AE +TRYG +GVKVWIS
Sbjct: 487  KGVEGIRICCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYASAEVSTRYGISGVKVWIS 546

Query: 368  YSKKK 354
            YSKKK
Sbjct: 547  YSKKK 551


>sp|Q04716.1|RT03_PETHY RecName: Full=Ribosomal protein S3, mitochondrial
            gi|14163|emb|CAA47420.1| S3 [Petunia x hybrida]
          Length = 562

 Score =  548 bits (1411), Expect = e-153
 Identities = 311/546 (56%), Positives = 375/546 (68%), Gaps = 41/546 (7%)
 Frame = -1

Query: 1865 MNRTPDSSWFSDYYYDKLVYQDVNMRSYFASIRPPTANTNGFRLARCVILHFPKRTSIQL 1686
            +NR+ DSSWFS YYY K VYQDVN+RSYF SIRPPT  T GFRL RC+ILHFPKRT I  
Sbjct: 14   LNRSSDSSWFS-YYYGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHF 72

Query: 1685 FLPRRPPR-RVNERSKAGKKKGRWWALRKVRPIAI---------------GKGSG---EG 1563
            FLPRRP R +  E+S+  K+KGRW A  KV PI                 G+G+G   E 
Sbjct: 73   FLPRRPRRLKRREKSRPVKEKGRWGAFGKVGPIGCLHSSDGTEEERNEVRGRGAGKRVES 132

Query: 1562 ERVQQSKQIEEVRIWPKKKQRSYGYHDRXXXXXXXXXXXXL--GVMRPSSKCSGVANDLT 1389
             R+   ++  E+RIWPKKKQ  YGYHDR               G  +   K +G+ ND+ 
Sbjct: 133  IRLDDREKQNEIRIWPKKKQ-GYGYHDRSPSIKKNLSKSLRVSGAFK-HPKYAGIENDIA 190

Query: 1388 FLLEHDISFRQTKLFKFFFPNKSHASLASQSQKILSAP-VPSSLDYTVMQYLLHTKNQIP 1212
            FL+E+D SFR+T LFKFFFP KS +   +      + P V  SL+Y+VMQYLL+TKN+I 
Sbjct: 191  FLIENDDSFRKTNLFKFFFPKKSRSDRPTSHLLKRTLPAVRPSLNYSVMQYLLNTKNKIH 250

Query: 1211 FDPIRFLNHFVARPVTAQPSFKGINDLDG----KRIRSLITFFVENSTSEKN-------R 1065
            FDP+  LNHFVA P  A+PS  G  +  G    KRI S I FFVENSTSEK        R
Sbjct: 251  FDPVVVLNHFVA-PGVAEPSTMGGANAQGRSLDKRIASCIAFFVENSTSEKKCLAEAKKR 309

Query: 1064 LTHLISKANDLRLSAGATTTRPTISP----TFFFPKDGLGVYNKPSFEDAREQLLSQLRT 897
            +TH I +ANDLR  AG T T  ++ P    TFFFP+DG+GVYN   FEDAREQLL QLR 
Sbjct: 310  VTHFIRQANDLRF-AGTTKTTISLFPFFGATFFFPRDGVGVYNNLFFEDAREQLLGQLRR 368

Query: 896  KCWNLMGKSEVMELVDKFTQQGENGMQGLIEAVEMMTMIILKNRRIPYGYNTYLNEVAKM 717
            KCWNLMGK +VMEL++KF      G   LI  +EMM  IIL+NRRIPYGYN YLNEV KM
Sbjct: 369  KCWNLMGKDKVMELIEKFIDLNRIGE--LIRGIEMMIEIILRNRRIPYGYNYYLNEVKKM 426

Query: 716  RSFLSDRTHTNTILESVKVKSNYQSASLIAQDIALQMKKKSRSFPSIFNQIVREMP---- 549
            RS L +RT+TNT++ESVK+KS YQSAS IAQDI+ Q + K+RSF SIF++IV+++P    
Sbjct: 427  RSLLYNRTNTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMK 486

Query: 548  KGVQGIRVCASGRIGGAEIAKVECAKFGKTSRNVFNQKVDYAFAEAATRYGTTGVKVWIS 369
            KGV+GIR+C SGR+ GAEIA+ EC K+GKTSRNVFNQK+DYA AE +TRYG +GVKVWIS
Sbjct: 487  KGVEGIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWIS 546

Query: 368  YSKKKE 351
            YSKKK+
Sbjct: 547  YSKKKK 552


>gb|AGC78893.1| ribosomal protein S3 (mitochondrion) [Vicia faba]
          Length = 563

 Score =  547 bits (1409), Expect = e-153
 Identities = 309/547 (56%), Positives = 376/547 (68%), Gaps = 42/547 (7%)
 Frame = -1

Query: 1865 MNRTPDSSWFSDYYYDKLVYQDVNMRSYFASIRPPTANTNGFRLARCVILHFPKRTSIQL 1686
            +NR+ DSS FSDYYY KLVYQDVN+RSYF SIRPP   T GFRL RC+++HFPKRT I  
Sbjct: 14   LNRSSDSSRFSDYYYGKLVYQDVNLRSYFGSIRPPARLTFGFRLGRCILIHFPKRTFIHF 73

Query: 1685 FLPRRPPR-RVNERSKAGKKKGRWWALRKVRPIAI---------------GKGSG---EG 1563
            FLPRRP R +  ++S+ GK+KGRWWA  KV PI                 G+ +G   E 
Sbjct: 74   FLPRRPRRLKRRDKSRPGKEKGRWWAFGKVGPIGCLHSSNKKEEERNEVRGRRAGKRVES 133

Query: 1562 ERVQQSKQIEEVRIWPKKKQRSYGYHDRXXXXXXXXXXXXL--GVMRPSSKCSGVANDLT 1389
             R+   ++  E+RIWPKKKQR YGYHDR               G  +   K +G  ND+ 
Sbjct: 134  IRLDDREKQNEIRIWPKKKQR-YGYHDRSPSIKKNLSKSLRVSGAFK-HPKYAGAVNDIA 191

Query: 1388 FLLEHDISFRQTKLFKFFFPNKSHASLASQS--QKILSAPVPSSLDYTVMQYLLHTKNQI 1215
            FL+E+  SFR+TK FKFFFP KS +   +    Q+ L A  PS L+Y+VMQY    KNQ+
Sbjct: 192  FLIENYDSFRKTKFFKFFFPKKSRSDGPTSHLFQRTLPAVRPS-LNYSVMQYFFCRKNQM 250

Query: 1214 PFDPIRFLNHFVARPVTAQPSFKGINDLDG----KRIRSLITFFVENSTSEKN------- 1068
             FDP+  LNHFVA P  A+PS  G  +  G    KRIRS I FFVE+STSEK        
Sbjct: 251  HFDPVVVLNHFVA-PGVAEPSTMGGANAQGRSLDKRIRSRIAFFVESSTSEKKCLAEAKK 309

Query: 1067 RLTHLISKANDLRLSAGATTTRPTISP----TFFFPKDGLGVYNKPSFEDAREQLLSQLR 900
            RLTHLI  ANDLR  AG T T  ++ P    TFFFP+D +G+YN   FEDARE LL QLR
Sbjct: 310  RLTHLIRLANDLRF-AGTTKTTISLFPFFGATFFFPRDRVGIYNNLFFEDAREPLLGQLR 368

Query: 899  TKCWNLMGKSEVMELVDKFTQQGENGMQGLIEAVEMMTMIILKNRRIPYGYNTYLNEVAK 720
             KCWNLMGK +VMEL+DKF   G  G    I+ +EMM  IIL+NR+IPYGYN+YLNEV K
Sbjct: 369  IKCWNLMGKDKVMELIDKFIDLGRIGEW--IKGIEMMIEIILRNRKIPYGYNSYLNEVKK 426

Query: 719  MRSFLSDRTHTNTILESVKVKSNYQSASLIAQDIALQMKKKSRSFPSIFNQIVREMP--- 549
            MRS LS+RT+TNT++ESVK+KS YQSAS IAQDI+ Q++KK+RSF SIF++IV+++P   
Sbjct: 427  MRSLLSNRTNTNTLIESVKIKSVYQSASPIAQDISFQLRKKTRSFRSIFSRIVKDIPLVM 486

Query: 548  -KGVQGIRVCASGRIGGAEIAKVECAKFGKTSRNVFNQKVDYAFAEAATRYGTTGVKVWI 372
             KGV+GIR+C SGR  GAEIA+ EC K+GKTSRNVFNQK+DYA AE +TRYG +GVKVWI
Sbjct: 487  KKGVEGIRICCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYASAEVSTRYGISGVKVWI 546

Query: 371  SYSKKKE 351
            SYSKKK+
Sbjct: 547  SYSKKKK 553


>ref|YP_003587365.1| ribosomal protein S3 [Cucurbita pepo] gi|259156834|gb|ACV96695.1|
            ribosomal protein S3 [Cucurbita pepo]
          Length = 565

 Score =  546 bits (1406), Expect = e-152
 Identities = 306/553 (55%), Positives = 378/553 (68%), Gaps = 48/553 (8%)
 Frame = -1

Query: 1865 MNRTPDSSWFSDYYYDKLVYQDVNMRSYFASIRPPTANTNGFRLARCVILHFPKRTSIQL 1686
            +NR+ DSSWFSDYYY KL+YQDVN+RSYF SIRPPT  T GFRL RC+ILHFPK T I  
Sbjct: 14   LNRSSDSSWFSDYYYGKLLYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKITFIHF 73

Query: 1685 FLPRRPPR-RVNERSKAGKKKGRWWALRKVRPIAIGKGSGEGE----------------- 1560
            FLPRRP   +   +SK GK +GRWWA  KV PI     S + E                 
Sbjct: 74   FLPRRPRGLKRRAKSKPGKDQGRWWAFGKVGPIGCLHSSDDTEEERNKVRGREAEKRVES 133

Query: 1559 --RVQQSKQIEEVRIWPKKKQRSYGYHDRXXXXXXXXXXXXLGVMRPSS-----KCSGVA 1401
              R+   ++  E+RIWPKKKQ  YGYHDR              ++R S      K +GV 
Sbjct: 134  MIRLDDREKQNEIRIWPKKKQ-DYGYHDRSPSRKKNLSK----LLRVSGAFKHPKYAGVV 188

Query: 1400 NDLTFLLEHDISFRQTKLFKFFFPNKSHASLASQSQKILSAPVPS---SLDYTVMQYLLH 1230
            ND+ FL+E+D SFR+T+LFKFFFPN+S +     +  +L   +P+   SL+Y VMQYLL+
Sbjct: 189  NDIAFLIENDDSFRKTQLFKFFFPNQSRSD--GPTSHLLKRTLPAVRPSLNYLVMQYLLN 246

Query: 1229 TKNQIPFDPIRFLNHFVARPVTAQPSFKGINDLDG----KRIRSLITFFVENSTSEKN-- 1068
            TKN++ FDP+  LNHFVA P  A+PS  G  +  G    KRIRS I FFVE+ TSEK   
Sbjct: 247  TKNKMHFDPVGVLNHFVA-PGVAEPSTMGGANTQGRSLDKRIRSRIAFFVESLTSEKKCL 305

Query: 1067 -----RLTHLISKANDLRLSAGATTTRPTISP----TFFFPKDGLGVYNKPSFEDAREQL 915
                 RLTH I +ANDLR  AG T T  ++ P    TFFFP+DG+G+Y    FED REQL
Sbjct: 306  AEPKKRLTHFIRQANDLRF-AGTTKTTISLFPFFGATFFFPRDGVGMYKNLFFEDTREQL 364

Query: 914  LSQLRTKCWNLMGKSE-VMELVDKFTQQGENGMQGLIEAVEMMTMIILKNRRIPYGYNTY 738
            L QLR KCWNLMGK + V+EL++KF   G  G+  LI+ +EMM  IIL+NRRIPYGYN+Y
Sbjct: 365  LGQLRIKCWNLMGKEDKVIELIEKFIDLG--GIGELIKGIEMMIEIILRNRRIPYGYNSY 422

Query: 737  LNEVAKMRSFLSDRTHTNTILESVKVKSNYQSASLIAQDIALQMKKKSRSFPSIFNQIVR 558
            LNEV KMRS LS+RT TNT++ESVK++S YQSASLIAQDI+ Q++ K+RSF SIF +IV+
Sbjct: 423  LNEVQKMRSLLSNRTKTNTLIESVKIQSVYQSASLIAQDISFQLRNKTRSFRSIFTKIVK 482

Query: 557  EMP----KGVQGIRVCASGRIGGAEIAKVECAKFGKTSRNVFNQKVDYAFAEAATRYGTT 390
            ++P    KGV+GIR+C SGR+ GAEIA+ EC K+GKTSRNVFNQK+DYA AE +TRYG  
Sbjct: 483  DIPFGMKKGVEGIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYASAEVSTRYGIL 542

Query: 389  GVKVWISYSKKKE 351
            GVKVWISY K+K+
Sbjct: 543  GVKVWISYKKQKK 555


>ref|YP_008802511.1| ribosomal protein S3 (mitochondrion) [Asclepias syriaca]
            gi|556562349|gb|AGZ63045.1| ribosomal protein S3
            (mitochondrion) [Asclepias syriaca]
          Length = 555

 Score =  545 bits (1405), Expect = e-152
 Identities = 311/544 (57%), Positives = 375/544 (68%), Gaps = 40/544 (7%)
 Frame = -1

Query: 1865 MNRTPDSSWFSDYYYDKLVYQDVNMRSYFASIRPPTANTNGFRLARCVILHFPKRTSIQL 1686
            +NR+ DSSWFSDYYY KLVYQDVN+RSYF SIRPPT  T GFRL RC+ILHFPKRT I  
Sbjct: 14   LNRSSDSSWFSDYYYGKLVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHF 73

Query: 1685 FLPRRPPRRVNERSKAGKKKGRWWALRKVRPIAI-------------GKGSGEGERVQQS 1545
            FLPRR PRR+  R K+  +K RWWA  KV PI                +G G G+RV   
Sbjct: 74   FLPRR-PRRLKRRDKSRPRKARWWAFGKVGPIGCLHSKDGTEEERKEVRGRGAGKRVDSI 132

Query: 1544 K---QIEEVRIWPKKKQRSYGYHDRXXXXXXXXXXXXLGVMRPSS-----KCSGVANDLT 1389
            +   +  E RIWPKKKQ  Y YHDR              ++R S      K +GV ND+ 
Sbjct: 133  RLDDRENERRIWPKKKQ-GYAYHDRSPSIKKNISK----LLRVSGAFKHPKYAGVVNDIA 187

Query: 1388 FLLEHDISFRQTKLFKFFFPNKS--HASLASQSQKILSAPVPSSLDYTVMQYLLHTKNQI 1215
            FL+E+D SFR+TKLFKFFFP KS  +   +   +K L A  P S +Y VMQYLL+TKN+I
Sbjct: 188  FLIENDDSFRKTKLFKFFFPKKSRFNGPTSHLLKKTLPAVRP-SFNYLVMQYLLNTKNKI 246

Query: 1214 PFDPIRFLNHFVARPVTAQPSFKGINDLD----GKRIRSLITFFVENSTSEKN-----RL 1062
             FDP+  LNHFVA P  A+PS  G  +       KRIRS I FFVE+ TSEK      +L
Sbjct: 247  HFDPVVVLNHFVA-PGVAEPSTMGRANAQERSLDKRIRSRIAFFVESLTSEKKSLAEAKL 305

Query: 1061 THLISKANDLRLSAGATTTRPTISP----TFFFPKDGLGVYNKPSFEDAREQLLSQLRTK 894
            TH I +ANDLR  AG T T  ++ P    TFFF +DG+GVYN   FEDAREQLL + R K
Sbjct: 306  THFIRQANDLRF-AGTTKTTTSLFPFFGATFFFLRDGVGVYNNLFFEDAREQLLGKSRIK 364

Query: 893  CWNLMGKSEVMELVDKFTQQGENGMQGLIEAVEMMTMIILKNRRIPYGYNTYLNEVAKMR 714
            CWNLM K++VMEL++KF   G  G   LI+ +EMM  IIL+ RRIPYGYN+YLNEV KMR
Sbjct: 365  CWNLMSKAKVMELIEKFIDLGRIG--ELIKGIEMMIEIILRKRRIPYGYNSYLNEVKKMR 422

Query: 713  SFLSDRTHTNTILESVKVKSNYQSASLIAQDIALQMKKKSRSFPSIFNQIVREMP----K 546
            S LS+RT+TNT++ESVK+KS YQSASLIAQDI+ Q++K  RSF SIF++IV+++P    K
Sbjct: 423  SLLSNRTNTNTLIESVKIKSVYQSASLIAQDISFQLRK--RSFRSIFSKIVKDIPLVMTK 480

Query: 545  GVQGIRVCASGRIGGAEIAKVECAKFGKTSRNVFNQKVDYAFAEAATRYGTTGVKVWISY 366
            GV+G+R+C SGR+ GAEIA+ EC K+GKTSRNVFNQK+DYA AE +TRYG  GVKVWISY
Sbjct: 481  GVEGVRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYASAEVSTRYGILGVKVWISY 540

Query: 365  SKKK 354
            SKKK
Sbjct: 541  SKKK 544


>sp|P27754.2|RT03_OENBE RecName: Full=Ribosomal protein S3, mitochondrial
            gi|632234|pir||S43767 ribosomal protein S3 - evening
            primrose mitochondrion gi|13191|emb|CAA48894.1| ribosomal
            protein S3 [Oenothera berteroana]
          Length = 550

 Score =  545 bits (1405), Expect = e-152
 Identities = 307/542 (56%), Positives = 366/542 (67%), Gaps = 40/542 (7%)
 Frame = -1

Query: 1865 MNRTPDSSWFSDYYYDKLVYQDVNMRSYFASIRPPTANTNGFRLARCVILHFPKRTSIQL 1686
            +NR+ DSSWFSDYYY K VYQDVN+RSYF SIRPPT  T GFRL RC+ILHFPKRT I  
Sbjct: 14   LNRSSDSSWFSDYYYGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHF 73

Query: 1685 FLPRRPPR-RVNERSKAGKKKGRWWALRKVRPIAI---------------GKGSG---EG 1563
            FLPRRP R +  ++S+ GK+K RWW   KV PI                 G+G+G   E 
Sbjct: 74   FLPRRPRRLKRGKKSRPGKEKARWWEFGKVGPIGCLHSNDDTEEERNEVGGRGAGKRVES 133

Query: 1562 ERVQQSKQIEEVRIWPKKKQRSYGYHDRXXXXXXXXXXXXL--GVMRPSSKCSGVANDLT 1389
             R+   ++  E+RIWPKKKQ  YGYHDR               G  +   K +GV ND+ 
Sbjct: 134  IRLDDREKQNEIRIWPKKKQ-GYGYHDRSPSIKKNLSKSLRVSGAFK-HPKYAGVLNDIA 191

Query: 1388 FLLEHDISFRQTKLFKFFFPNKSHAS-LASQSQKILSAPVPSSLDYTVMQYLLHTKNQIP 1212
            FL+E+D SFR+TKLFKFFFP KS +    S   K     V  SL+Y+VMQY L+TKNQ+ 
Sbjct: 192  FLIENDDSFRKTKLFKFFFPKKSRSDGPTSHLLKRTPPAVRPSLNYSVMQYYLNTKNQMH 251

Query: 1211 FDPIRFLNHFVARPVTAQPSFKGINDLDGK----RIRSLITFFVENSTSEKNRLT----- 1059
            FDP+  LNHFVA P  A+PS  G  +  G+    RIRS I FFVE+STSEK  L      
Sbjct: 252  FDPLVVLNHFVA-PGVAEPSTMGGANRQGRSNELRIRSRIAFFVESSTSEKKSLAEDKKG 310

Query: 1058 --HLISKANDLRLSAGATTTR---PTISPTFFFPKDGLGVYNKPSFEDAREQLLSQLRTK 894
              H I + NDLR +    TT    P    TFFFP+DG+GVY    FEDAREQLL QLR K
Sbjct: 311  LPHFIRQENDLRFAGRTKTTISLFPFFGATFFFPRDGVGVYKHLFFEDAREQLLGQLRIK 370

Query: 893  CWNLMGKSEVMELVDKFTQQGENGMQGLIEAVEMMTMIILKNRRIPYGYNTYLNEVAKMR 714
            CW LMGK +VMEL++KF   G  G+  LI+ +E+M  IIL+NRRIPYGYN+YLNEV KMR
Sbjct: 371  CWKLMGKDKVMELIEKFIDLG--GIGELIKGIEIMIEIILRNRRIPYGYNSYLNEVKKMR 428

Query: 713  SFLSDRTHTNTILESVKVKSNYQSASLIAQDIALQMKKKSRSFPSIFNQIVREMP----K 546
            S LS+RT TNTI+ESVK+KS YQSAS IAQDI+ Q + K RSF SIF+QIV+++P    K
Sbjct: 429  SLLSNRTKTNTIIESVKIKSVYQSASPIAQDISFQPRNKRRSFRSIFSQIVKDIPLVMKK 488

Query: 545  GVQGIRVCASGRIGGAEIAKVECAKFGKTSRNVFNQKVDYAFAEAATRYGTTGVKVWISY 366
            GV+GIR+C SGR  GAEIA+ EC K+GKTSRNVFNQK+DYA AE +TRYG  GVKVWISY
Sbjct: 489  GVEGIRICCSGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWISY 548

Query: 365  SK 360
            SK
Sbjct: 549  SK 550


>gb|AGC79006.1| ribosomal protein S3 (mitochondrion) [Vicia faba]
          Length = 563

 Score =  541 bits (1395), Expect = e-151
 Identities = 307/547 (56%), Positives = 375/547 (68%), Gaps = 42/547 (7%)
 Frame = -1

Query: 1865 MNRTPDSSWFSDYYYDKLVYQDVNMRSYFASIRPPTANTNGFRLARCVILHFPKRTSIQL 1686
            +NR+ DSS FS+ YY KLVYQDVN+RSYF SIRPP   T GFRL RC+++HFPKRT I  
Sbjct: 14   LNRSSDSSRFSEDYYGKLVYQDVNLRSYFGSIRPPARLTFGFRLGRCILIHFPKRTFIHF 73

Query: 1685 FLPRRPPR-RVNERSKAGKKKGRWWALRKVRPIAI---------------GKGSG---EG 1563
            FLPRRP R +  ++S+ GK+KGRWWA  KV PI                 G+ +G   E 
Sbjct: 74   FLPRRPRRLKRRDKSRPGKEKGRWWAFGKVGPIGCLHSSNKKEEERNEVRGRRAGKRVES 133

Query: 1562 ERVQQSKQIEEVRIWPKKKQRSYGYHDRXXXXXXXXXXXXL--GVMRPSSKCSGVANDLT 1389
             R+   ++  E+RIWPKKKQR YGYHDR               G  +   K +G  ND+ 
Sbjct: 134  IRLDDREKQNEIRIWPKKKQR-YGYHDRSPSIKKNLSKSLRVSGAFK-HPKYAGAVNDIA 191

Query: 1388 FLLEHDISFRQTKLFKFFFPNKSHASLASQS--QKILSAPVPSSLDYTVMQYLLHTKNQI 1215
            FL+E+  SFR+TK FKFFFP KS +   +    Q+ L A  PS L+Y+VMQY    KNQ+
Sbjct: 192  FLIENYDSFRKTKFFKFFFPKKSRSDGPTSHLFQRTLPAVRPS-LNYSVMQYFFCRKNQM 250

Query: 1214 PFDPIRFLNHFVARPVTAQPSFKGINDLDG----KRIRSLITFFVENSTSEKN------- 1068
             FDP+  LNHFVA P  A+PS  G  +  G    KRIRS I FFVE+STSEK        
Sbjct: 251  HFDPVVVLNHFVA-PGVAEPSTMGGANAQGRSLDKRIRSRIAFFVESSTSEKKCLAEAKK 309

Query: 1067 RLTHLISKANDLRLSAGATTTRPTISP----TFFFPKDGLGVYNKPSFEDAREQLLSQLR 900
            RLTHLI  ANDLR  AG T T  ++ P    TFFFP+D +G+YN   FEDARE LL QLR
Sbjct: 310  RLTHLIRLANDLRF-AGTTKTTISLFPFFGATFFFPRDRVGIYNNLFFEDAREPLLGQLR 368

Query: 899  TKCWNLMGKSEVMELVDKFTQQGENGMQGLIEAVEMMTMIILKNRRIPYGYNTYLNEVAK 720
             KCWNLMGK +VMEL+DKF   G  G    I+ +EMM  IIL+NR+IPYGYN+YLNEV K
Sbjct: 369  IKCWNLMGKDKVMELIDKFIDLGRIGEW--IKGIEMMIEIILRNRKIPYGYNSYLNEVKK 426

Query: 719  MRSFLSDRTHTNTILESVKVKSNYQSASLIAQDIALQMKKKSRSFPSIFNQIVREMP--- 549
            MRS LS+RT+TNT++ESVK+KS YQSAS IAQDI+ Q++KK+RSF SIF++IV+++P   
Sbjct: 427  MRSLLSNRTNTNTLIESVKIKSVYQSASPIAQDISFQLRKKTRSFRSIFSRIVKDIPLVM 486

Query: 548  -KGVQGIRVCASGRIGGAEIAKVECAKFGKTSRNVFNQKVDYAFAEAATRYGTTGVKVWI 372
             KGV+GIR+C SGR  GAEIA+ EC K+GKTSRNVFNQK+DYA AE +TRYG +GVKVWI
Sbjct: 487  KKGVEGIRICCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYASAEVSTRYGISGVKVWI 546

Query: 371  SYSKKKE 351
            SYSKKK+
Sbjct: 547  SYSKKKK 553


>ref|YP_004222806.1| ribosomal protein S3 [Vigna radiata] gi|308206736|gb|ADO19873.1|
            ribosomal protein S3 [Vigna radiata]
          Length = 563

 Score =  538 bits (1386), Expect = e-150
 Identities = 308/546 (56%), Positives = 373/546 (68%), Gaps = 41/546 (7%)
 Frame = -1

Query: 1865 MNRTPDSSWFSDYYYDKLVYQDVNMRSYFASIRPPTANTNGFRLARCVILHFPKRTSIQL 1686
            +NR+ DSS FSDYYY KLVYQDVN+RSYF SIRPP   T GFRL RC+++HFPKRT I  
Sbjct: 14   LNRSSDSSRFSDYYYGKLVYQDVNLRSYFGSIRPPARLTFGFRLGRCILIHFPKRTFIHF 73

Query: 1685 FLPRRPPR-RVNERSKAGKKKGRWWALRKVRPIAI---------------GKGSG---EG 1563
            FLPRRP R +  ++S+ GK+KGRWWA  KV PI                 G+ +G   E 
Sbjct: 74   FLPRRPRRLKRRKKSRPGKEKGRWWAFGKVGPIGCLHSSDNTEEERNEVRGRRAGKRVES 133

Query: 1562 ERVQQSKQIEEVRIWPKKKQRSYGYHDRXXXXXXXXXXXXL--GVMRPSSKCSGVANDLT 1389
             R+   ++  E+RIWPKKKQR YGYHDR               G  +   K +GV ND+ 
Sbjct: 134  IRLDDREKQNEIRIWPKKKQR-YGYHDRSPSIKKNLSKSLRVSGAFK-HPKYAGVVNDIA 191

Query: 1388 FLLEHDISFRQTKLFKFFFPNKSHAS-LASQSQKILSAPVPSSLDYTVMQYLLHTKNQIP 1212
            FL+E+D SFR+ K F+FFFP KS +    S   K     V  SL+Y+VMQYLL+ KNQ+ 
Sbjct: 192  FLIENDDSFRKRKFFQFFFPKKSRSDGPTSHLFKRTLPAVRPSLNYSVMQYLLNRKNQMH 251

Query: 1211 FDPIRFLNHFVARPVTAQPSFKGI----NDLDGKRIRSLITFFVENSTSEKN-------R 1065
            FDP+  LNHFVA P  A+PS  G       LD KRIRS I FFVE+STSEK        R
Sbjct: 252  FDPVVVLNHFVA-PGVAEPSTMGGAKQGRGLD-KRIRSRIAFFVESSTSEKKCLAEAKKR 309

Query: 1064 LTHLISKANDLRLSAGATTTRPTISP----TFFFPKDGLGVYNKPSFEDAREQLLSQLRT 897
            LTH I  ANDLR  AG T T  ++ P    TFFFP+D +G Y   SFEDARE LL QLR 
Sbjct: 310  LTHFIRLANDLRF-AGTTKTTISLFPFFGATFFFPRDRVGFYKNLSFEDAREPLLGQLRI 368

Query: 896  KCWNLMGKSEVMELVDKFTQQGENGMQGLIEAVEMMTMIILKNRRIPYGYNTYLNEVAKM 717
            KC NLMGK +VMEL++KF   G  G    I+ +EMM  IIL+NRRIPYGYN+YLNEV KM
Sbjct: 369  KCCNLMGKDKVMELIEKFIDLGRIGEW--IKGIEMMIEIILRNRRIPYGYNSYLNEVKKM 426

Query: 716  RSFLSDRTHTNTILESVKVKSNYQSASLIAQDIALQMKKKSRSFPSIFNQIVREMP---- 549
            RS LS+RT+TNT++ESVK+KS YQSAS IAQDI+ Q++KK+RSF SIF++IV+++P    
Sbjct: 427  RSLLSNRTNTNTLIESVKIKSVYQSASPIAQDISFQLRKKTRSFRSIFSRIVKDIPLVMK 486

Query: 548  KGVQGIRVCASGRIGGAEIAKVECAKFGKTSRNVFNQKVDYAFAEAATRYGTTGVKVWIS 369
            KGV+GIR+C SGR  GAEIA+ EC K+GKTS NVFNQK+DYA AE +TRYG +GVKVWIS
Sbjct: 487  KGVEGIRICCSGRSEGAEIARTECGKYGKTSHNVFNQKIDYASAEVSTRYGISGVKVWIS 546

Query: 368  YSKKKE 351
            YSKKK+
Sbjct: 547  YSKKKK 552


>gb|ABY55191.1| ribosomal protein S3 [Bambusa oldhamii] gi|340748038|gb|AEK66755.1|
            ribosomal protein S3 [Ferrocalamus rimosivaginus]
            gi|372861948|gb|AEX98098.1| ribosomal protein S3
            (mitochondrion) [Ferrocalamus rimosivaginus]
          Length = 558

 Score =  536 bits (1380), Expect = e-149
 Identities = 309/543 (56%), Positives = 373/543 (68%), Gaps = 38/543 (6%)
 Frame = -1

Query: 1865 MNRTPDSSWFSDYYYDKLVYQDVNMRSYFASIRPPTANTNGFRLARCVILHFPKRTSIQL 1686
            +NR+ D S FSDYYY K +YQDVN+RSYF+SIRPPT  T GFRL RC+ILHFPKRT I  
Sbjct: 14   LNRSSDPSRFSDYYYGKSLYQDVNLRSYFSSIRPPTILTFGFRLGRCIILHFPKRTFIHF 73

Query: 1685 FLPRRPPR-RVNERSKAGKKKGRWWALRKVRPIAI---------------GKGSGEG-ER 1557
            FLPRRP R +  ++S+ GK KGRWWA  KV PI                 G+G+G+  E 
Sbjct: 74   FLPRRPLRLKRRDKSRPGKDKGRWWAFGKVGPIGCLHSSEGTEEERNEVRGRGAGKRVES 133

Query: 1556 VQQSKQIEEVRIWPKKKQRSYGYHDRXXXXXXXXXXXXL--GVMRPSSKCSGVANDLTFL 1383
            + + KQ  E+RIWPKK QR YGYHDR               G  +   K +GV ND+ FL
Sbjct: 134  IDREKQ-NEIRIWPKKMQR-YGYHDRSPSRKKNFSKSLRVSGAFK-HPKYAGVVNDIAFL 190

Query: 1382 LEHDISFRQTKLFKFFFPNKSHAS-LASQSQKILSAPVPSSLDYTVMQYLLHTKNQIPFD 1206
            +E+D SFR+TKLFKFF P KS +    S  QK     V  SL+Y+VMQY  +TKN++ FD
Sbjct: 191  IENDDSFRKTKLFKFFLPKKSRSDGPTSHLQKRTLPAVRPSLNYSVMQYFFNTKNKMHFD 250

Query: 1205 PIRFLNHFVARPVTAQPSFKGI---NDLDGKRIRSLITFFVENSTSEKN-------RLTH 1056
            P+  LNHFVA P  A+PS  G      LD KRIRS I FFVE+STSEK        RL H
Sbjct: 251  PVVVLNHFVA-PGVAEPSTMGGAKGGSLD-KRIRSRIAFFVESSTSEKKCLARAKKRLIH 308

Query: 1055 LISKANDLRLSAGATTTRPTISP----TFFFPKDGLGVYNKPSFEDAREQLLSQLRTKCW 888
             I +ANDLR  AG T T  ++ P    TFFFP+DG+GVYN P FE AREQLL QLR KC 
Sbjct: 309  FIRQANDLRF-AGTTKTTISLFPFFGATFFFPRDGVGVYNNPFFEYAREQLLGQLRIKCR 367

Query: 887  NLMGKSEVMELVDKFTQQGENGMQGLIEAVEMMTMIILKNRRIPYGYNTYLNEVAKMRSF 708
            NLMGK +VMEL++KF   G  G   LI+ +EMM  IIL+ R IPYGYN+YLNEV KMRSF
Sbjct: 368  NLMGKDKVMELIEKFIDLGRIGK--LIKGIEMMIEIILRKRIIPYGYNSYLNEVQKMRSF 425

Query: 707  LSDRTHTNTILESVKVKSNYQSASLIAQDIALQMKKKSRSFPSIFNQIVRE----MPKGV 540
            LS+RT+TNT++ESVK+KS YQSASLIAQDI+ Q++    SF SIF+QIV++    MPKGV
Sbjct: 426  LSNRTNTNTLIESVKIKSVYQSASLIAQDISFQLRNNPISFRSIFSQIVKDIPLIMPKGV 485

Query: 539  QGIRVCASGRIGGAEIAKVECAKFGKTSRNVFNQKVDYAFAEAATRYGTTGVKVWISYSK 360
            +GIR+C SGR+GGAEIA+ EC K+GKTS NVFNQK+DYA AE +TR G +GVKV ISYS+
Sbjct: 486  EGIRICCSGRLGGAEIARTECGKYGKTSCNVFNQKIDYAPAEVSTRNGISGVKVRISYSQ 545

Query: 359  KKE 351
             K+
Sbjct: 546  NKK 548


>emb|CBJ23369.1| ribosomal protein S3 [Beta vulgaris subsp. maritima]
          Length = 551

 Score =  534 bits (1376), Expect = e-149
 Identities = 300/547 (54%), Positives = 371/547 (67%), Gaps = 44/547 (8%)
 Frame = -1

Query: 1865 MNRTPDSSWFSDYYYDKLVYQDVNMRSYFASIRPPTANTNGFRLARCVILHFPKRTSIQL 1686
            +NR+ DSSWF+DYYY KLVYQD+N+RSYF SIRPPT  T GFRL RC+I+HF KRT I  
Sbjct: 14   LNRSSDSSWFNDYYYGKLVYQDINLRSYFGSIRPPTRLTFGFRLGRCIIIHFQKRTFINF 73

Query: 1685 FLPRRPPRRVN-ERSKAGKKKGRWWALRKVRPIAI---GKGSGE----------GERVQQ 1548
            FLPRRP RR   ++S+ GK KGRWW L KV PI      +G  E          G+RV+ 
Sbjct: 74   FLPRRPQRRKRRKKSRPGKTKGRWWELGKVGPIECLYSSEGRKEERNEVRDRRAGKRVES 133

Query: 1547 -----SKQIEEVRIWPKKKQRSYGYHDRXXXXXXXXXXXXLGVMRPSS-----KCSGVAN 1398
                  K+  E+R+WPKKKQR YGYHDR              ++R S      K + V N
Sbjct: 134  IRLDDQKKQNEIRVWPKKKQR-YGYHDRSPSIKKNLSK----LLRVSGAFKHPKYAEVVN 188

Query: 1397 DLTFLLEHDISFRQTKLFKFFFPNKSHASLASQSQKILSAPVPS---SLDYTVMQYLLHT 1227
            D+ FL+E+D SF++TKLFKFFFP KS       +  +L   +P+   SL+Y VMQYLL+T
Sbjct: 189  DIAFLIENDSSFKKTKLFKFFFPKKSRYD--GPTSHLLKRTLPAVRPSLNYLVMQYLLNT 246

Query: 1226 KNQIPFDPIRFLNHFVARPVTAQPSFKGINDLDG---KRIRSLITFFVENSTSEKN---- 1068
            K ++ FDP+  LNHFVA  V    +    N   G   KRIRS I FFVE+STS+K     
Sbjct: 247  KKKMHFDPVLVLNHFVAPGVVEPSTMNRANAQGGSLDKRIRSRIAFFVESSTSQKKCLAE 306

Query: 1067 ---RLTHLISKANDLRLSAGATTTR---PTISPTFFFPKDGLGVYNKPSFEDAREQLLSQ 906
               RLTH I +ANDLR +    TT    P    TFFF +DG+ VYN   F+DAREQLL Q
Sbjct: 307  AKKRLTHFIRQANDLRFAGRRKTTISLFPFFGATFFFLRDGVRVYNNLFFKDAREQLLGQ 366

Query: 905  LRTKCWNLMGKSEVMELVDKFTQQGENGMQGLIEAVEMMTMIILKNRRIPYGYNTYLNEV 726
            LR KCWNLMGK +VM+L++KF   G  G++ LI+ +EMM  IILKNRRIPYG N+YLNEV
Sbjct: 367  LRRKCWNLMGKDKVMKLIEKFIDLG--GIRELIKGIEMMIEIILKNRRIPYGSNSYLNEV 424

Query: 725  AKMRSFLSDRTHTNTILESVKVKSNYQSASLIAQDIALQMKKKSRSFPSIFNQIVREMP- 549
             KMRS LS+RT+TNT++ESVK+KS YQSASLIAQDI+ Q+KKK  SF SIF++IV+++P 
Sbjct: 425  KKMRSLLSNRTNTNTLIESVKIKSVYQSASLIAQDISFQLKKKRGSFRSIFSKIVKKIPL 484

Query: 548  ---KGVQGIRVCASGRIGGAEIAKVECAKFGKTSRNVFNQKVDYAFAEAATRYGTTGVKV 378
               +GV+GIR+C SGR+ GAEIA+ EC K+GKTS NV +QK+DYA AE +TRYG  GVKV
Sbjct: 485  VMKRGVEGIRICCSGRLEGAEIARTECGKYGKTSCNVLHQKIDYASAEVSTRYGIVGVKV 544

Query: 377  WISYSKK 357
            WISYS K
Sbjct: 545  WISYSPK 551


>dbj|BAD66747.1| ribosomal protein S3 [Beta vulgaris subsp. vulgaris]
            gi|54606764|dbj|BAD66787.1| ribosomal protein S3 [Beta
            vulgaris subsp. vulgaris]
          Length = 551

 Score =  534 bits (1376), Expect = e-149
 Identities = 299/544 (54%), Positives = 369/544 (67%), Gaps = 41/544 (7%)
 Frame = -1

Query: 1865 MNRTPDSSWFSDYYYDKLVYQDVNMRSYFASIRPPTANTNGFRLARCVILHFPKRTSIQL 1686
            +NR+ DSSWF+DYYY KLVYQD+N+RSYF SIRPPT  T GFRL RC+I+HF KRT I  
Sbjct: 14   LNRSSDSSWFNDYYYGKLVYQDINLRSYFGSIRPPTRLTFGFRLGRCIIIHFQKRTFINF 73

Query: 1685 FLPRRPPRRVN-ERSKAGKKKGRWWALRKVRPIAI---GKGSGE----------GERVQQ 1548
            FLPRRP RR   ++S+ GK KGRWW L KV PI      +G  E          G+RV+ 
Sbjct: 74   FLPRRPQRRKRRKKSRPGKTKGRWWELGKVGPIECLYSSEGRKEERNEVRDRRAGKRVES 133

Query: 1547 -----SKQIEEVRIWPKKKQRSYGYHDRXXXXXXXXXXXXL--GVMRPSSKCSGVANDLT 1389
                  K+  E+R+WPKKKQR YGYHDR               G  +   K + V ND+ 
Sbjct: 134  IRLDDQKKQNEIRVWPKKKQR-YGYHDRSPSIKKNLSKSLRVSGAFK-HPKYAEVVNDIA 191

Query: 1388 FLLEHDISFRQTKLFKFFFPNKSHASLASQSQKILSAPVPS---SLDYTVMQYLLHTKNQ 1218
            FL+E+D SF++TKLFKFFFP KS       +  +L   +P+   SL+Y+VMQYLL+TK +
Sbjct: 192  FLIENDSSFKKTKLFKFFFPKKSRYD--GPTSHLLKRTLPAVRPSLNYSVMQYLLNTKKK 249

Query: 1217 IPFDPIRFLNHFVARPVTAQPSFKGINDLDG---KRIRSLITFFVENSTSEKN------- 1068
            + FDP+  LNHFVA  V    +    N   G   KRIRS I FFVE+STS+K        
Sbjct: 250  MHFDPVLVLNHFVAPGVVEPSTMNRANAQGGSLDKRIRSRIAFFVESSTSQKKCLAEAKK 309

Query: 1067 RLTHLISKANDLRLSAGATTTR---PTISPTFFFPKDGLGVYNKPSFEDAREQLLSQLRT 897
            RLTH I +ANDLR +    TT    P    TFFFP+DG+ VYN   F+DAREQLL QLR 
Sbjct: 310  RLTHFIRQANDLRFAGRRKTTISLFPFFGATFFFPRDGVRVYNNLFFKDAREQLLGQLRI 369

Query: 896  KCWNLMGKSEVMELVDKFTQQGENGMQGLIEAVEMMTMIILKNRRIPYGYNTYLNEVAKM 717
            KCWNLMGK +VM+L++KF   G  G++ LI+ +EMM  IILKNRRIPYG N+YLNEV KM
Sbjct: 370  KCWNLMGKDKVMKLIEKFIDLG--GIRELIKGIEMMIEIILKNRRIPYGSNSYLNEVKKM 427

Query: 716  RSFLSDRTHTNTILESVKVKSNYQSASLIAQDIALQMKKKSRSFPSIFNQIVREMP---- 549
            RS LS+RT+TNT++ESVK+KS YQSAS IAQDI+ Q KKK  SF SIF++IV+++P    
Sbjct: 428  RSLLSNRTNTNTLIESVKIKSVYQSASPIAQDISFQPKKKRGSFRSIFSKIVKKIPLVMK 487

Query: 548  KGVQGIRVCASGRIGGAEIAKVECAKFGKTSRNVFNQKVDYAFAEAATRYGTTGVKVWIS 369
            +GV+GIR+C SGR+ GAEIA+ EC K+GKTS NV +QK+DYA AE +TRYG  GVKVWIS
Sbjct: 488  RGVEGIRICCSGRLEGAEIARTECGKYGKTSCNVLHQKIDYASAEVSTRYGIVGVKVWIS 547

Query: 368  YSKK 357
            YS K
Sbjct: 548  YSPK 551


>ref|YP_005090420.1| rps3 gene product (mitochondrion) [Boea hygrometrica]
            gi|340549496|gb|AEK53317.1| ribosomal protein S3
            (mitochondrion) [Boea hygrometrica]
          Length = 558

 Score =  533 bits (1373), Expect = e-148
 Identities = 303/546 (55%), Positives = 372/546 (68%), Gaps = 42/546 (7%)
 Frame = -1

Query: 1865 MNRTPDSSWFSDYYYDKLVYQDVNMRSYFASIRPPTANTNGFRLARCVILHFPKRTSIQL 1686
            +NR+ DSSWFS+YYY K VYQD+N+RSYF SIRPPT  T GFRL RC+ILHFPKRT + L
Sbjct: 14   LNRSSDSSWFSEYYYAKSVYQDLNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFLHL 73

Query: 1685 FLPRRPPR-RVNERSKAGKKKGRWWALRKVRPIAI---------------GKGSGE---G 1563
            FLPRRP R +  E+S+ GK KGRWW   KV PI                 G+GSGE    
Sbjct: 74   FLPRRPRRLKRREKSRPGKAKGRWWEFGKVGPIGCLHSSDGTEEERNEVRGRGSGERVES 133

Query: 1562 ERVQQSKQIEEVRIWPKKKQRSYGYHDRXXXXXXXXXXXXLGVMRPSSKCSGVANDLTFL 1383
             R+   ++  E+RIWPKKKQ  YGYHDR                      +GV N + FL
Sbjct: 134  IRLDDREKQNEIRIWPKKKQ-GYGYHDRSPSIKKNLSKSLRVSGAFKHPNAGVVNGIAFL 192

Query: 1382 LEHDISFRQTKLFKFFFPNKSHASLASQSQKILSAPVP---SSLDYTVMQYLLHTKNQIP 1212
            +E+D SFR+TKLFKFFFP KS +     +  +L   +P   SSL+Y+VMQYLL+TK ++ 
Sbjct: 193  IENDDSFRKTKLFKFFFPKKSRSD--GPTSHLLKRTLPAVRSSLNYSVMQYLLNTKKKMH 250

Query: 1211 FDPIRFLNHFVARPVTAQPSFKG-----INDLDGKRIRSLITFFVENSTSEKN------- 1068
            FDP+  LNHFVA P  A+PS  G        LD KRIRS I FF+E+STSEK        
Sbjct: 251  FDPVVVLNHFVA-PGVAEPSTMGGANAQERSLD-KRIRSRIAFFLESSTSEKKCLAEAKK 308

Query: 1067 RLTHLISKANDLRLSAGATTTRPTISP----TFFFPKDGLGVYNKPSFEDAREQLLSQLR 900
            RLTH I +A DLR  AG T T  ++ P    TFFFP+  +GVYN   FE+AR+QLL QLR
Sbjct: 309  RLTHFIRQAIDLRF-AGTTKTTISLFPFFGATFFFPR--VGVYNNLFFENARQQLLRQLR 365

Query: 899  TKCWNLMGKSEVMELVDKFTQQGENGMQGLIEAVEMMTMIILKNRRIPYGYNTYLNEVAK 720
             KCWNLM K +VMEL++KF   G  G   LI+ +EMM  IIL+NRRIPYGYN+YLNE+ K
Sbjct: 366  RKCWNLMAKDKVMELIEKFIDLGRIGE--LIKGIEMMIEIILRNRRIPYGYNSYLNEMKK 423

Query: 719  MRSFLSDRTHTNTILESVKVKSNYQSASLIAQDIALQMKKKSRSFPSIFNQIVREMP--- 549
            MRS LS+RT+TNT++ESVK+KS YQSAS IAQDI+ Q++ K+RSF SIF +IV+ +P   
Sbjct: 424  MRSLLSNRTNTNTLIESVKIKSVYQSASPIAQDISFQLRTKTRSFRSIFTKIVKNIPLVM 483

Query: 548  -KGVQGIRVCASGRIGGAEIAKVECAKFGKTSRNVFNQKVDYAFAEAATRYGTTGVKVWI 372
             KGV+GIR+C SGR  GAEIA+ EC K+GKTSRNVF+QK+DYA AE +TRYG  GVKVWI
Sbjct: 484  KKGVEGIRICCSGRSEGAEIARTECGKYGKTSRNVFHQKIDYAPAEVSTRYGILGVKVWI 543

Query: 371  SYSKKK 354
            SYS+K+
Sbjct: 544  SYSQKR 549