BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00015874
         (3034 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch...  1456   0.0  
sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymeras...  1434   0.0  
dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymer...  1431   0.0  
ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prun...  1429   0.0  
ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citr...  1426   0.0  
ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2, ch...  1425   0.0  
sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymeras...  1425   0.0  
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi...  1416   0.0  
ref|XP_004232127.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...  1406   0.0  
ref|XP_006338320.1| PREDICTED: DNA-directed RNA polymerase 2, ch...  1403   0.0  
ref|XP_004304185.1| PREDICTED: DNA-directed RNA polymerase 2, ch...  1402   0.0  
gb|EYU39350.1| hypothetical protein MIMGU_mgv1a000681mg [Mimulus...  1387   0.0  
ref|XP_007032921.1| DNA/RNA polymerases superfamily protein [The...  1380   0.0  
ref|XP_006602976.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1379   0.0  
ref|XP_003530460.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1376   0.0  
ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mi...  1374   0.0  
ref|XP_007225383.1| hypothetical protein PRUPE_ppa000780mg [Prun...  1371   0.0  
sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymeras...  1371   0.0  
ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mi...  1370   0.0  
emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]        1369   0.0  

>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            [Vitis vinifera] gi|298204431|emb|CBI16911.3| unnamed
            protein product [Vitis vinifera]
          Length = 1035

 Score = 1456 bits (3768), Expect = 0.0
 Identities = 717/884 (81%), Positives = 777/884 (87%), Gaps = 2/884 (0%)
 Frame = -2

Query: 3033 DDSSVVDEIQXXXXXXXXXXXKHFQXXXXXXXXXXXGMGQGKYQFLRRRQVKIETEAWEQ 2854
            +D S  DEIQ           +              GM QG+Y  LRRRQVKIETEAWE 
Sbjct: 152  EDVSASDEIQELLGEMKKEEKRQVNFKRREKLKMERGMEQGRYLRLRRRQVKIETEAWEL 211

Query: 2853 AANEYKDLLKDMCEQKLAPNLPYIKSLFLGWFEPLCNAITAEQELCRQGKNRAAYARYFD 2674
            AA EYK+LL DMCEQKLAPNLPY+KSLFLGWFEPL +AI  EQELCR GKN+AAYA YFD
Sbjct: 212  AAKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIVKEQELCRLGKNKAAYAPYFD 271

Query: 2673 LLPADMMSVITMHKLMGLVMIGGEHGSARVVQAACMLGEAIEQEVRIHKFLEXXXXXKVD 2494
             LPADMMSVITMHKL+GL+M GGEHGS RVVQAAC++G+AIEQEVRIH FLE     KV 
Sbjct: 272  QLPADMMSVITMHKLVGLLMTGGEHGSTRVVQAACVIGDAIEQEVRIHNFLEKTKRKKVG 331

Query: 2493 RDKNA-GDRSEIVIQEQDKLRKKVTNLIKKQKLQAVRQIVKGHDDLKPWGPEVRAKVGSR 2317
            +DKN  G   + VI EQ+KLRKKVTNL+KKQKL A RQIVKGHD+ KPWGPE +AKVGSR
Sbjct: 332  KDKNVEGGGFDPVIHEQEKLRKKVTNLMKKQKLHAARQIVKGHDNSKPWGPEAKAKVGSR 391

Query: 2316 LIELLLQTAYIQPPAD-QLADGPPDIRPAFVHTSKTMVKETKKISRRYGIIQCDPLVLKG 2140
            LIELL+QTAYIQPP D QLAD PPDIRPAFVHT KT+++E KKI RR+G+I+CDPLV KG
Sbjct: 392  LIELLMQTAYIQPPVDNQLADTPPDIRPAFVHTFKTVMREAKKIGRRFGVIECDPLVKKG 451

Query: 2139 LEKTARHMVIPYIPMLVPPVKWTGYDKGAHLFLPSYVMRTHGSRQQREAVKRAPKKQLEP 1960
            LE+TARHMVIPY+PMLVPP+KWTGYDKGAHLFLPSYVMRTHG+RQQREAVKRAP+ QLEP
Sbjct: 452  LERTARHMVIPYVPMLVPPLKWTGYDKGAHLFLPSYVMRTHGARQQREAVKRAPRNQLEP 511

Query: 1959 IFEALDTLGNTKWRVNKRVLSVVDRIWAGGGRLADLVDRKDIPLPERPDTEDEEQLXXXX 1780
            +FEAL+TLGNTKWR+NKR+  VVDRIWAGGG LADLVDR D+PLPE+PDTEDE QL    
Sbjct: 512  VFEALNTLGNTKWRINKRLFDVVDRIWAGGGCLADLVDRNDVPLPEKPDTEDEAQLRKWK 571

Query: 1779 XXXXXXXKENGEKHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPHLNHLGS 1600
                   K N E+HSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHP+LNHLGS
Sbjct: 572  WKVKSVKKANSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGS 631

Query: 1599 DLCRGILEFADGRPLGESGLRWLKIHLANLYAGGVDKLSHDGRIAFTENHLDDIFDSSDK 1420
            DLCRGILEFA+GRPLG SGL WLKIHLANL+AGGVDKLSH+GRI FTENHLDDIFDS+D+
Sbjct: 632  DLCRGILEFAEGRPLGSSGLHWLKIHLANLFAGGVDKLSHEGRITFTENHLDDIFDSADR 691

Query: 1419 PLEGRRWWLKAEDPLQCLAVCINLSEALRSSSPETFYSHIPVHQDGSCNGLQHYAALGRD 1240
            PLEG+RWWL AEDP Q LA CINLSEALRSSSPET  SHIPVHQDGSCNGLQHYAALGRD
Sbjct: 692  PLEGKRWWLNAEDPFQFLAACINLSEALRSSSPETTISHIPVHQDGSCNGLQHYAALGRD 751

Query: 1239 KLGAAAVNLVAGDKPADVYSGIAARVLDIMRQDAQKDPAIYPDALRARILINQVDRKLVK 1060
            +LGA AVNLVAG+KPADVYSGIAARVLDIM++DA+KDPAI+PDALRARILINQVDRKLVK
Sbjct: 752  QLGATAVNLVAGEKPADVYSGIAARVLDIMKRDAEKDPAIFPDALRARILINQVDRKLVK 811

Query: 1059 QTVMTSVYGVTYIGARDQIKRRLKERGTAIEDAELYGASCYAAKTTLTALGEMFEAARSI 880
            QTVMTSVYGVTYIGARDQIKRRLKER    +D EL+GA+CYAAK TLTALGEMF+AARSI
Sbjct: 812  QTVMTSVYGVTYIGARDQIKRRLKERNAIADDVELFGAACYAAKITLTALGEMFQAARSI 871

Query: 879  MSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETEKIMVKR 700
            MSWLGDCAK+IASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETE IMVKR
Sbjct: 872  MSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETETIMVKR 931

Query: 699  QRTAFPPNFVHSLDGSHMMMTAVACNKAGLNFAGVHDSYWTHACDVDEMSRILREKFVEL 520
            QRTAFPPNFVHSLDGSHMMMTA+AC KAGLNFAGVHDSYWTHACDVDEM+R+LREKFV+L
Sbjct: 932  QRTAFPPNFVHSLDGSHMMMTAIACKKAGLNFAGVHDSYWTHACDVDEMNRLLREKFVQL 991

Query: 519  YEAPILENLLESFQQSFPTLTFPPLPERGDFDLREVLKSPYFFN 388
            YE PILENLLESFQQSFP L FPPLPERGDFDLREVL+SPYFFN
Sbjct: 992  YETPILENLLESFQQSFPALEFPPLPERGDFDLREVLESPYFFN 1035


>sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial; AltName: Full=NsRpoT-B;
            AltName: Full=T7 bacteriophage-type single subunit RNA
            polymerase 2; Flags: Precursor
            gi|21425639|emb|CAC82575.2| phage-type RNA polymerase
            [Nicotiana sylvestris]
          Length = 1020

 Score = 1434 bits (3712), Expect = 0.0
 Identities = 701/882 (79%), Positives = 777/882 (88%)
 Frame = -2

Query: 3033 DDSSVVDEIQXXXXXXXXXXXKHFQXXXXXXXXXXXGMGQGKYQFLRRRQVKIETEAWEQ 2854
            +D SVVDE+            K F            GMG  KYQ L+RRQVK+ETEAWEQ
Sbjct: 140  EDVSVVDEVHELLTELKKEEKKQFAFRRRKQRMLTSGMGHRKYQTLKRRQVKVETEAWEQ 199

Query: 2853 AANEYKDLLKDMCEQKLAPNLPYIKSLFLGWFEPLCNAITAEQELCRQGKNRAAYARYFD 2674
            AA EYK+LL DMCEQKLAPNLPY+KSLFLGWFEPL + I  EQELC QGK++AAYA+YF 
Sbjct: 200  AAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQGKSKAAYAKYFY 259

Query: 2673 LLPADMMSVITMHKLMGLVMIGGEHGSARVVQAACMLGEAIEQEVRIHKFLEXXXXXKVD 2494
             LPADMM+VITMHKLMGL+M GG+HG+ARVVQAA ++G+AIEQEVRIH FLE     K +
Sbjct: 260  QLPADMMAVITMHKLMGLLMTGGDHGTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKAE 319

Query: 2493 RDKNAGDRSEIVIQEQDKLRKKVTNLIKKQKLQAVRQIVKGHDDLKPWGPEVRAKVGSRL 2314
            +DK   D  E V QEQ+KLRKKVTNL+KKQKL+AV QIV+  DD KPWG + RAKVGSRL
Sbjct: 320  KDKQKED-GEHVTQEQEKLRKKVTNLMKKQKLRAVGQIVRRQDDSKPWGQDARAKVGSRL 378

Query: 2313 IELLLQTAYIQPPADQLADGPPDIRPAFVHTSKTMVKETKKISRRYGIIQCDPLVLKGLE 2134
            I+LLLQTAYIQPPA+QLA  PPDIRPAFVH+ +T+ KETK  SRRYGIIQCD LV KGLE
Sbjct: 379  IDLLLQTAYIQPPANQLAVDPPDIRPAFVHSVRTVAKETKSASRRYGIIQCDELVFKGLE 438

Query: 2133 KTARHMVIPYIPMLVPPVKWTGYDKGAHLFLPSYVMRTHGSRQQREAVKRAPKKQLEPIF 1954
            +TARHMVIPY+PMLVPPVKWTGYDKG HL+LPSYVMRTHG+RQQREAVKRA + QL+P+F
Sbjct: 439  RTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLQPVF 498

Query: 1953 EALDTLGNTKWRVNKRVLSVVDRIWAGGGRLADLVDRKDIPLPERPDTEDEEQLXXXXXX 1774
            EALDTLGNTKWR+NKRVLSVVDRIWAGGGRLADLVDR D PLPE PDTEDE         
Sbjct: 499  EALDTLGNTKWRINKRVLSVVDRIWAGGGRLADLVDRDDAPLPEEPDTEDEALRTKWRWK 558

Query: 1773 XXXXXKENGEKHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPHLNHLGSDL 1594
                 KEN E+HSQRCDIELKLAVARKMKDE+ FFYPHN+DFRGRAYPMHPHLNHLGSD+
Sbjct: 559  VKSVKKENRERHSQRCDIELKLAVARKMKDEESFFYPHNVDFRGRAYPMHPHLNHLGSDI 618

Query: 1593 CRGILEFADGRPLGESGLRWLKIHLANLYAGGVDKLSHDGRIAFTENHLDDIFDSSDKPL 1414
            CRG+LEFA+GRPLGESGLRWLKIHLANL+AGGV+KLS +GRI FTENH+DDIFDSSDKPL
Sbjct: 619  CRGVLEFAEGRPLGESGLRWLKIHLANLFAGGVEKLSLEGRIGFTENHMDDIFDSSDKPL 678

Query: 1413 EGRRWWLKAEDPLQCLAVCINLSEALRSSSPETFYSHIPVHQDGSCNGLQHYAALGRDKL 1234
            EGRRWWL AEDP QCLAVCINLSEA+RSSSPET  SHIPVHQDGSCNGLQHYAALGRDKL
Sbjct: 679  EGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETSVSHIPVHQDGSCNGLQHYAALGRDKL 738

Query: 1233 GAAAVNLVAGDKPADVYSGIAARVLDIMRQDAQKDPAIYPDALRARILINQVDRKLVKQT 1054
            GAAAVNLVAG+KPADVYSGIAARVLDIM++DAQ+DPA +PDA+RAR+L+NQVDRKLVKQT
Sbjct: 739  GAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQRDPAEFPDAVRARVLVNQVDRKLVKQT 798

Query: 1053 VMTSVYGVTYIGARDQIKRRLKERGTAIEDAELYGASCYAAKTTLTALGEMFEAARSIMS 874
            VMTSVYGVTYIGARDQIKRRLKERG   +D+EL+GA+CYAAK TLTALGEMFEAARSIM+
Sbjct: 799  VMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVTLTALGEMFEAARSIMT 858

Query: 873  WLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETEKIMVKRQR 694
            WLG+CAK+IASEN+PVRWTTPLGLPVVQPYRK+GRHLIKTSLQ+LTLQRETEK+MVKRQR
Sbjct: 859  WLGECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHLIKTSLQILTLQRETEKVMVKRQR 918

Query: 693  TAFPPNFVHSLDGSHMMMTAVACNKAGLNFAGVHDSYWTHACDVDEMSRILREKFVELYE 514
            TAFPPNF+HSLDGSHMMMTAVAC +AGLNFAGVHDSYWTHACDVD+++RILREKFVELYE
Sbjct: 919  TAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDKLNRILREKFVELYE 978

Query: 513  APILENLLESFQQSFPTLTFPPLPERGDFDLREVLKSPYFFN 388
            APILE LLESFQ S+PTL FPPLPERGDFD+R+VL+SPYFFN
Sbjct: 979  APILEKLLESFQTSYPTLLFPPLPERGDFDMRDVLESPYFFN 1020


>dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
            sylvestris] gi|17221595|dbj|BAB78465.1| T7
            bacteriophage-type single subunit RNA polymerase
            [Nicotiana sylvestris]
          Length = 1020

 Score = 1431 bits (3703), Expect = 0.0
 Identities = 699/882 (79%), Positives = 776/882 (87%)
 Frame = -2

Query: 3033 DDSSVVDEIQXXXXXXXXXXXKHFQXXXXXXXXXXXGMGQGKYQFLRRRQVKIETEAWEQ 2854
            +D SVVDE+            K F            GMG  KYQ L+RRQVK+ETEAWEQ
Sbjct: 140  EDVSVVDEVHELLTELKKEEKKQFAFRRRKQRMLTSGMGHRKYQTLKRRQVKVETEAWEQ 199

Query: 2853 AANEYKDLLKDMCEQKLAPNLPYIKSLFLGWFEPLCNAITAEQELCRQGKNRAAYARYFD 2674
            AA EYK+LL DMCEQKLAPNLPY+KSLFLGWFEPL + I  EQELC QGK++AAYA+YF 
Sbjct: 200  AAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQGKSKAAYAKYFY 259

Query: 2673 LLPADMMSVITMHKLMGLVMIGGEHGSARVVQAACMLGEAIEQEVRIHKFLEXXXXXKVD 2494
             LPADMM+VITMHKLMGL+M GG+HG+ARVVQAA ++G+AIEQEVRIH FLE     K +
Sbjct: 260  QLPADMMAVITMHKLMGLLMTGGDHGTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKAE 319

Query: 2493 RDKNAGDRSEIVIQEQDKLRKKVTNLIKKQKLQAVRQIVKGHDDLKPWGPEVRAKVGSRL 2314
            +DK   D  E V QEQ+KLRKKVTNL+KKQKL+AV QIV+  DD KPWG + RAKVGSRL
Sbjct: 320  KDKQKED-GEHVTQEQEKLRKKVTNLMKKQKLRAVGQIVRRQDDSKPWGQDARAKVGSRL 378

Query: 2313 IELLLQTAYIQPPADQLADGPPDIRPAFVHTSKTMVKETKKISRRYGIIQCDPLVLKGLE 2134
            I+LLLQTAYIQPPA+QLA  PPDI PAFVH+ +T+ KETK  SRRYGIIQCD LV KGLE
Sbjct: 379  IDLLLQTAYIQPPANQLAVDPPDIPPAFVHSVRTVAKETKSASRRYGIIQCDELVFKGLE 438

Query: 2133 KTARHMVIPYIPMLVPPVKWTGYDKGAHLFLPSYVMRTHGSRQQREAVKRAPKKQLEPIF 1954
            +TARHMVIPY+PMLVPPVKWTGYDKG HL+LPSYVMRTHG+RQQREAVKRA + QL+P+F
Sbjct: 439  RTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLQPVF 498

Query: 1953 EALDTLGNTKWRVNKRVLSVVDRIWAGGGRLADLVDRKDIPLPERPDTEDEEQLXXXXXX 1774
            EALDTLGNTKWR+NKRVLSVVDRIWAGGGRLADLVDR D PLPE PDTEDE  L      
Sbjct: 499  EALDTLGNTKWRINKRVLSVVDRIWAGGGRLADLVDRDDAPLPEEPDTEDEALLPKWRWK 558

Query: 1773 XXXXXKENGEKHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPHLNHLGSDL 1594
                 KEN E+HSQRCDIELKLAVARKMKDE+ FFYPHN+DFRGRAYPMHPHLNHLGSD+
Sbjct: 559  VKSVKKENRERHSQRCDIELKLAVARKMKDEESFFYPHNVDFRGRAYPMHPHLNHLGSDI 618

Query: 1593 CRGILEFADGRPLGESGLRWLKIHLANLYAGGVDKLSHDGRIAFTENHLDDIFDSSDKPL 1414
            CRG+LEFA+GRPLGESGLRWLKIHLANL+AGGV+KLS +GRI FTENH+DDIFDSSDKPL
Sbjct: 619  CRGVLEFAEGRPLGESGLRWLKIHLANLFAGGVEKLSLEGRIGFTENHMDDIFDSSDKPL 678

Query: 1413 EGRRWWLKAEDPLQCLAVCINLSEALRSSSPETFYSHIPVHQDGSCNGLQHYAALGRDKL 1234
            EGRRWWL AEDP QCLAVCINLSEA+RSSSPET  SHIPVHQDGSCNGLQHYAALGRDKL
Sbjct: 679  EGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETSVSHIPVHQDGSCNGLQHYAALGRDKL 738

Query: 1233 GAAAVNLVAGDKPADVYSGIAARVLDIMRQDAQKDPAIYPDALRARILINQVDRKLVKQT 1054
            GAAAVNLVAG+KPA+ YSGIAARVLDIM++DAQ+DPA +PDA+RAR+L+NQVDRKLVKQT
Sbjct: 739  GAAAVNLVAGEKPAEAYSGIAARVLDIMKRDAQRDPAEFPDAVRARVLVNQVDRKLVKQT 798

Query: 1053 VMTSVYGVTYIGARDQIKRRLKERGTAIEDAELYGASCYAAKTTLTALGEMFEAARSIMS 874
            VMTSVYGVTYIGARDQIKRRLKERG   +D+EL+GA+CYAAK TLTALGEMFEAARSIM+
Sbjct: 799  VMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVTLTALGEMFEAARSIMT 858

Query: 873  WLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETEKIMVKRQR 694
            WLG+CAK+IASEN+PVRWTTPLGLPVVQPYRK+GRHLIKTSLQ+LTLQRETEK+MVKRQR
Sbjct: 859  WLGECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHLIKTSLQILTLQRETEKVMVKRQR 918

Query: 693  TAFPPNFVHSLDGSHMMMTAVACNKAGLNFAGVHDSYWTHACDVDEMSRILREKFVELYE 514
            TAFPPNF+HSLDGSHMMMTAVAC +AGLNFAGVHDSYWTHACDVD+++RILREKFVELYE
Sbjct: 919  TAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDKLNRILREKFVELYE 978

Query: 513  APILENLLESFQQSFPTLTFPPLPERGDFDLREVLKSPYFFN 388
            APILE LLESFQ S+PTL FPPLPERGDFD+R+VL+SPYFFN
Sbjct: 979  APILEKLLESFQTSYPTLLFPPLPERGDFDMRDVLESPYFFN 1020


>ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prunus persica]
            gi|462411068|gb|EMJ16117.1| hypothetical protein
            PRUPE_ppa000719mg [Prunus persica]
          Length = 1024

 Score = 1429 bits (3698), Expect = 0.0
 Identities = 695/882 (78%), Positives = 771/882 (87%)
 Frame = -2

Query: 3033 DDSSVVDEIQXXXXXXXXXXXKHFQXXXXXXXXXXXGMGQGKYQFLRRRQVKIETEAWEQ 2854
            ++ SVVDE+Q           +  Q           GMGQGKY  L+RRQ+KIETEAWE+
Sbjct: 144  EEVSVVDEVQELLQQMSIEEKREAQYKQRTRQNRARGMGQGKYHMLKRRQIKIETEAWER 203

Query: 2853 AANEYKDLLKDMCEQKLAPNLPYIKSLFLGWFEPLCNAITAEQELCRQGKNRAAYARYFD 2674
            AA EY++L+ DMCEQKLAPNLPY+KSLFLGWFEPL NAI  EQ+LCR+GKN+ AYA Y D
Sbjct: 204  AAKEYRELMMDMCEQKLAPNLPYMKSLFLGWFEPLRNAIDKEQDLCRKGKNKTAYAPYID 263

Query: 2673 LLPADMMSVITMHKLMGLVMIGGEHGSARVVQAACMLGEAIEQEVRIHKFLEXXXXXKVD 2494
             LPADMMSVITMHKLMGL+M GGEHG+ RVV AAC +GEAIEQEVRIHKFLE     KVD
Sbjct: 264  QLPADMMSVITMHKLMGLLMTGGEHGTCRVVAAACTIGEAIEQEVRIHKFLEMTRKKKVD 323

Query: 2493 RDKNAGDRSEIVIQEQDKLRKKVTNLIKKQKLQAVRQIVKGHDDLKPWGPEVRAKVGSRL 2314
            +D+  G+ S+   +E++KL KKVTNL+KKQKL+AVR IV  HD  K W  E RAKVGSRL
Sbjct: 324  KDQENGE-SDAAKKEREKLNKKVTNLMKKQKLKAVRGIVSKHDASKSWSLEARAKVGSRL 382

Query: 2313 IELLLQTAYIQPPADQLADGPPDIRPAFVHTSKTMVKETKKISRRYGIIQCDPLVLKGLE 2134
            IELL QTA+IQPPADQLADGPPDIRPAFVHT +T+ K+ K  SRRYG+I+CDPLVLKGLE
Sbjct: 383  IELLTQTAFIQPPADQLADGPPDIRPAFVHTFRTVAKDAKNASRRYGVIECDPLVLKGLE 442

Query: 2133 KTARHMVIPYIPMLVPPVKWTGYDKGAHLFLPSYVMRTHGSRQQREAVKRAPKKQLEPIF 1954
            KTARHMVIPY+PMLVPP+ WTGYDKG + FLPSYVMR HG+RQQREA+KR P++QLEP+F
Sbjct: 443  KTARHMVIPYMPMLVPPLNWTGYDKGGYFFLPSYVMRIHGARQQREAIKRTPREQLEPVF 502

Query: 1953 EALDTLGNTKWRVNKRVLSVVDRIWAGGGRLADLVDRKDIPLPERPDTEDEEQLXXXXXX 1774
            +ALD LGNT+WRVNKRVLSVVDRIWA GG LADLVDR D+PLPE PDTEDE  L      
Sbjct: 503  KALDALGNTRWRVNKRVLSVVDRIWASGGHLADLVDRNDVPLPEEPDTEDETLLKKWKWK 562

Query: 1773 XXXXXKENGEKHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPHLNHLGSDL 1594
                 KEN E+HSQRCD ELKLAVARKMKDE+GF+YPHNLDFRGRAYPMHP+LNHLGSD+
Sbjct: 563  VKSVKKENMERHSQRCDTELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDV 622

Query: 1593 CRGILEFADGRPLGESGLRWLKIHLANLYAGGVDKLSHDGRIAFTENHLDDIFDSSDKPL 1414
            CRGILEF +GRPLG+SGL WLKIHLANLYAGGVDKLS +GRIAFTENHLDDIFDS DKPL
Sbjct: 623  CRGILEFQEGRPLGKSGLSWLKIHLANLYAGGVDKLSLEGRIAFTENHLDDIFDSVDKPL 682

Query: 1413 EGRRWWLKAEDPLQCLAVCINLSEALRSSSPETFYSHIPVHQDGSCNGLQHYAALGRDKL 1234
            EGRRWWLKAEDP QCLAVCINL+EALRSSSPETF SHIPVHQDGSCNGLQHYAALGRDKL
Sbjct: 683  EGRRWWLKAEDPFQCLAVCINLAEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKL 742

Query: 1233 GAAAVNLVAGDKPADVYSGIAARVLDIMRQDAQKDPAIYPDALRARILINQVDRKLVKQT 1054
            GAA+VNLV G+KPADVYSGIA RVL+IMR+DAQKDP ++P+ALRA++LINQVDRKLVKQT
Sbjct: 743  GAASVNLVTGEKPADVYSGIAVRVLEIMRRDAQKDPVVFPEALRAKLLINQVDRKLVKQT 802

Query: 1053 VMTSVYGVTYIGARDQIKRRLKERGTAIEDAELYGASCYAAKTTLTALGEMFEAARSIMS 874
            VMTSVYGVTYIGARDQIKRRLKERG+  +DAE++G +CYAAK TLTALGEMFEAAR IMS
Sbjct: 803  VMTSVYGVTYIGARDQIKRRLKERGSISDDAEIFGCACYAAKITLTALGEMFEAARGIMS 862

Query: 873  WLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETEKIMVKRQR 694
            WLG+CAK+IASENQPVRWTTPLGLPVVQPYRK GRHLIKTSLQVLTLQRETEK+MVKRQR
Sbjct: 863  WLGECAKIIASENQPVRWTTPLGLPVVQPYRKFGRHLIKTSLQVLTLQRETEKVMVKRQR 922

Query: 693  TAFPPNFVHSLDGSHMMMTAVACNKAGLNFAGVHDSYWTHACDVDEMSRILREKFVELYE 514
            TAFPPNFVHSLD SHMMMTA+AC KAGL+FAGVHDSYWTHACDVDEM++ILREKFV+LYE
Sbjct: 923  TAFPPNFVHSLDSSHMMMTAIACKKAGLSFAGVHDSYWTHACDVDEMNKILREKFVQLYE 982

Query: 513  APILENLLESFQQSFPTLTFPPLPERGDFDLREVLKSPYFFN 388
             PILENLLESFQQSFP LTFPPLPERGDFDLR+VL+SPYFFN
Sbjct: 983  TPILENLLESFQQSFPALTFPPLPERGDFDLRDVLESPYFFN 1024


>ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
            gi|557533045|gb|ESR44228.1| hypothetical protein
            CICLE_v10010966mg [Citrus clementina]
          Length = 1030

 Score = 1426 bits (3692), Expect = 0.0
 Identities = 690/847 (81%), Positives = 762/847 (89%), Gaps = 2/847 (0%)
 Frame = -2

Query: 2922 MGQGKYQFLRRRQVKIETEAWEQAANEYKDLLKDMCEQKLAPNLPYIKSLFLGWFEPLCN 2743
            MG GKY+ L+ RQVKIETEAWEQAANEY++LL DMCEQKLAPNLPY+KSLFLGWFEPL +
Sbjct: 184  MGSGKYRMLKMRQVKIETEAWEQAANEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRD 243

Query: 2742 AITAEQELCRQGKNRAAYARYFDLLPADMMSVITMHKLMGLVMIGGEHGSARVVQAACML 2563
            AI  EQE CR  K++ AYA YFD LPADMM+VITMHKLMGL+M GGEHG ARVVQAAC++
Sbjct: 244  AIAKEQERCRMAKHKVAYAPYFDQLPADMMAVITMHKLMGLLMTGGEHGRARVVQAACII 303

Query: 2562 GEAIEQEVRIHKFLEXXXXXKVDRDKN--AGDRSEIVIQEQDKLRKKVTNLIKKQKLQAV 2389
            G+AIEQEVRIHKFLE        ++K    GD S  V  EQ+KLRKKVT+LIKKQKL AV
Sbjct: 304  GDAIEQEVRIHKFLEKTKKKNETKNKEDEEGDESNTVTTEQEKLRKKVTDLIKKQKLPAV 363

Query: 2388 RQIVKGHDDLKPWGPEVRAKVGSRLIELLLQTAYIQPPADQLADGPPDIRPAFVHTSKTM 2209
            R+IVKG DD KPWG + RAKVGSR+IELL QTAYIQ PADQL D PPDI PAF HT +T+
Sbjct: 364  RRIVKGQDDFKPWGQDARAKVGSRVIELLTQTAYIQSPADQLVDAPPDIFPAFTHTLRTV 423

Query: 2208 VKETKKISRRYGIIQCDPLVLKGLEKTARHMVIPYIPMLVPPVKWTGYDKGAHLFLPSYV 2029
             KETK  S++YG+I+C+PLVLKGLE+TARHMVIPY+PMLVPPVKWTGYDKGAH FLPSYV
Sbjct: 424  SKETKGGSKKYGVIECNPLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKGAHFFLPSYV 483

Query: 2028 MRTHGSRQQREAVKRAPKKQLEPIFEALDTLGNTKWRVNKRVLSVVDRIWAGGGRLADLV 1849
            MRTHG++QQR+ VKR PKKQLEP+FEALDTLGNTKWRVN RVLSV+DRIW+ GGRLADLV
Sbjct: 484  MRTHGAKQQRDTVKRTPKKQLEPVFEALDTLGNTKWRVNNRVLSVLDRIWSCGGRLADLV 543

Query: 1848 DRKDIPLPERPDTEDEEQLXXXXXXXXXXXKENGEKHSQRCDIELKLAVARKMKDEDGFF 1669
            DR D+PLPE+P+TEDE QL           KEN E+HSQRCDIELKL+VARKMKDE+GF+
Sbjct: 544  DRNDVPLPEKPETEDEAQLRKWQWKVRNVKKENRERHSQRCDIELKLSVARKMKDEEGFY 603

Query: 1668 YPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFADGRPLGESGLRWLKIHLANLYAGGVDK 1489
            YPHN+DFRGRAYPMHP+LNHLGSDLCRGILEFA+GR LG+SGL WLKIHLANLYAGGVDK
Sbjct: 604  YPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRTLGKSGLHWLKIHLANLYAGGVDK 663

Query: 1488 LSHDGRIAFTENHLDDIFDSSDKPLEGRRWWLKAEDPLQCLAVCINLSEALRSSSPETFY 1309
            LSH+GR+AFTENHLDDIFDS+DKPLEGRRWWLKAEDP QCLAVCINL+EALRSSSPETF 
Sbjct: 664  LSHEGRLAFTENHLDDIFDSADKPLEGRRWWLKAEDPFQCLAVCINLTEALRSSSPETFI 723

Query: 1308 SHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMRQDAQKD 1129
            SHIPVHQDGSCNGLQHYAALGRD LGAAAVNLVA +KPADVYSGIAARVL I+R+DAQ+D
Sbjct: 724  SHIPVHQDGSCNGLQHYAALGRDTLGAAAVNLVAREKPADVYSGIAARVLVIIRRDAQRD 783

Query: 1128 PAIYPDALRARILINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGTAIEDAELYG 949
            PA++PDALRA++L++QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERG  +E+AEL+G
Sbjct: 784  PAVFPDALRAKLLLSQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAPMEEAELFG 843

Query: 948  ASCYAAKTTLTALGEMFEAARSIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGR 769
            ASCYAAK TLTALGEMF+AAR IMSWLG+CAK+IASENQPVRWTTPLGLPVVQPYRKLGR
Sbjct: 844  ASCYAAKVTLTALGEMFQAARGIMSWLGECAKIIASENQPVRWTTPLGLPVVQPYRKLGR 903

Query: 768  HLIKTSLQVLTLQRETEKIMVKRQRTAFPPNFVHSLDGSHMMMTAVACNKAGLNFAGVHD 589
            H +KTSLQ+LTLQRETEK+MVKRQRTAFPPNFVHSLDGSHMMMTAVAC KAGL FAGVHD
Sbjct: 904  HTVKTSLQILTLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACRKAGLTFAGVHD 963

Query: 588  SYWTHACDVDEMSRILREKFVELYEAPILENLLESFQQSFPTLTFPPLPERGDFDLREVL 409
            SYWTHACDVDEM+RILREKFVELYE PILENLL+SFQ+SFP L  PPLPERGDFDLREVL
Sbjct: 964  SYWTHACDVDEMNRILREKFVELYEMPILENLLDSFQKSFPKLVLPPLPERGDFDLREVL 1023

Query: 408  KSPYFFN 388
             SPYFFN
Sbjct: 1024 GSPYFFN 1030


>ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial-like [Citrus sinensis]
          Length = 1026

 Score = 1425 bits (3689), Expect = 0.0
 Identities = 689/847 (81%), Positives = 763/847 (90%), Gaps = 2/847 (0%)
 Frame = -2

Query: 2922 MGQGKYQFLRRRQVKIETEAWEQAANEYKDLLKDMCEQKLAPNLPYIKSLFLGWFEPLCN 2743
            MG GKY+ L+ RQVKIETEAWE+AANEY++LL DMCEQKLAPNLPY+KSLFLGWFEPL +
Sbjct: 180  MGSGKYRMLKMRQVKIETEAWEKAANEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRD 239

Query: 2742 AITAEQELCRQGKNRAAYARYFDLLPADMMSVITMHKLMGLVMIGGEHGSARVVQAACML 2563
            AI  EQE CR  K++ AYA YFD LPADMM+VITMHKLMGL+M GGEHG ARVVQAAC++
Sbjct: 240  AIAKEQERCRMAKHKVAYAPYFDQLPADMMAVITMHKLMGLLMTGGEHGRARVVQAACII 299

Query: 2562 GEAIEQEVRIHKFLEXXXXXKVDRDKN--AGDRSEIVIQEQDKLRKKVTNLIKKQKLQAV 2389
            G+AIEQEVRIHKFLE        ++K    GD S  V  EQ+KLRKKVT+LIKKQKL AV
Sbjct: 300  GDAIEQEVRIHKFLEKTKKKNETKNKEDEEGDESNTVTTEQEKLRKKVTDLIKKQKLPAV 359

Query: 2388 RQIVKGHDDLKPWGPEVRAKVGSRLIELLLQTAYIQPPADQLADGPPDIRPAFVHTSKTM 2209
            R+IVKG DD KPWG + RAKVGSR+IELL QTAYIQ PADQLAD PPDI PAF H  +T+
Sbjct: 360  RRIVKGQDDFKPWGQDARAKVGSRVIELLTQTAYIQSPADQLADAPPDIFPAFTHALRTV 419

Query: 2208 VKETKKISRRYGIIQCDPLVLKGLEKTARHMVIPYIPMLVPPVKWTGYDKGAHLFLPSYV 2029
             KETK  S++YG+I+C+PLVLKGLE+TARHMVIPY+PMLVPPVKWTGYDKGAH FLPSYV
Sbjct: 420  SKETKGGSKKYGVIECNPLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKGAHFFLPSYV 479

Query: 2028 MRTHGSRQQREAVKRAPKKQLEPIFEALDTLGNTKWRVNKRVLSVVDRIWAGGGRLADLV 1849
            MRTHG++QQR+ VKR PKKQLEP+FEALDTLGNTKWRVN RVLSV+DRIW+ GGRLADLV
Sbjct: 480  MRTHGAKQQRDTVKRTPKKQLEPVFEALDTLGNTKWRVNNRVLSVLDRIWSCGGRLADLV 539

Query: 1848 DRKDIPLPERPDTEDEEQLXXXXXXXXXXXKENGEKHSQRCDIELKLAVARKMKDEDGFF 1669
            DR D+PLPE+P+TEDE QL           KEN E+HSQRCDIELKL+VARKMKDE+GF+
Sbjct: 540  DRNDVPLPEKPETEDEAQLRKWQWKVRNVKKENRERHSQRCDIELKLSVARKMKDEEGFY 599

Query: 1668 YPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFADGRPLGESGLRWLKIHLANLYAGGVDK 1489
            YPHN+DFRGRAYPMHP+LNHLGSDLCRGILEFA+GR LG+SGL WLKIHLANLYAGGVDK
Sbjct: 600  YPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRTLGKSGLHWLKIHLANLYAGGVDK 659

Query: 1488 LSHDGRIAFTENHLDDIFDSSDKPLEGRRWWLKAEDPLQCLAVCINLSEALRSSSPETFY 1309
            LSH+GR+AFTENHLDDIFDS+DKPLEGRRWWLKAEDP QCLAVCINL+EALRSSSPETF 
Sbjct: 660  LSHEGRLAFTENHLDDIFDSADKPLEGRRWWLKAEDPFQCLAVCINLTEALRSSSPETFI 719

Query: 1308 SHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMRQDAQKD 1129
            SHIPVHQDGSCNGLQHYAALGRD LGAAAVNLVA +KPADVYSGIAARVL I+++DAQ+D
Sbjct: 720  SHIPVHQDGSCNGLQHYAALGRDTLGAAAVNLVAREKPADVYSGIAARVLVIIQRDAQRD 779

Query: 1128 PAIYPDALRARILINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGTAIEDAELYG 949
            PA++PDALRA++L++QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERG  +E+AEL+G
Sbjct: 780  PAVFPDALRAKLLLSQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAPMEEAELFG 839

Query: 948  ASCYAAKTTLTALGEMFEAARSIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGR 769
            ASCYAAK TLTALGEMF+AAR IMSWLG+CAK+IASENQPVRWTTPLGLPVVQPYRKLGR
Sbjct: 840  ASCYAAKVTLTALGEMFQAARGIMSWLGECAKIIASENQPVRWTTPLGLPVVQPYRKLGR 899

Query: 768  HLIKTSLQVLTLQRETEKIMVKRQRTAFPPNFVHSLDGSHMMMTAVACNKAGLNFAGVHD 589
            H +KTSLQ+LTLQRETEK+MVKRQRTAFPPNFVHSLDGSHMMMTAVAC KAGL FAGVHD
Sbjct: 900  HTVKTSLQILTLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACRKAGLTFAGVHD 959

Query: 588  SYWTHACDVDEMSRILREKFVELYEAPILENLLESFQQSFPTLTFPPLPERGDFDLREVL 409
            SYWTHACDVDEM+RILREKFVELYE PILENLL+SFQ+SFP L FPPLPERGDFDLREVL
Sbjct: 960  SYWTHACDVDEMNRILREKFVELYEMPILENLLDSFQKSFPKLVFPPLPERGDFDLREVL 1019

Query: 408  KSPYFFN 388
             SPYFFN
Sbjct: 1020 GSPYFFN 1026


>sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial; AltName:
            Full=NictaRpoT2-tom; AltName: Full=T7 bacteriophage-type
            single subunit RNA polymerase 2B; Flags: Precursor
            gi|21425665|emb|CAC95020.1| mitochondrial and chloroplast
            RNA polymerase [Nicotiana tabacum]
          Length = 1021

 Score = 1425 bits (3688), Expect = 0.0
 Identities = 696/882 (78%), Positives = 776/882 (87%)
 Frame = -2

Query: 3033 DDSSVVDEIQXXXXXXXXXXXKHFQXXXXXXXXXXXGMGQGKYQFLRRRQVKIETEAWEQ 2854
            +D SVVDE+Q           K F            GMG  KYQ L+RRQVK+ETEAWEQ
Sbjct: 141  EDVSVVDEVQELLTELKKEEKKQFAFRRRKQRMLTSGMGHRKYQTLKRRQVKVETEAWEQ 200

Query: 2853 AANEYKDLLKDMCEQKLAPNLPYIKSLFLGWFEPLCNAITAEQELCRQGKNRAAYARYFD 2674
            AA EYK+LL DMCEQKLAPNLPY+KSLFLGWFEPL + I  EQELC QGK++AAYA+Y  
Sbjct: 201  AAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQGKSKAAYAKYLY 260

Query: 2673 LLPADMMSVITMHKLMGLVMIGGEHGSARVVQAACMLGEAIEQEVRIHKFLEXXXXXKVD 2494
             LPADMM+VITMHKLMGL+M GG+HG+ARVVQAA ++G+AIEQEVRIH FLE     K +
Sbjct: 261  QLPADMMAVITMHKLMGLLMTGGDHGTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKAE 320

Query: 2493 RDKNAGDRSEIVIQEQDKLRKKVTNLIKKQKLQAVRQIVKGHDDLKPWGPEVRAKVGSRL 2314
            +DK   D  E V QEQ+KLRKKVTNL+KKQKL+AV QIV+  DD KPWG + +AKVGSRL
Sbjct: 321  KDKQKED-GEHVTQEQEKLRKKVTNLMKKQKLRAVGQIVRRQDDSKPWGQDAKAKVGSRL 379

Query: 2313 IELLLQTAYIQPPADQLADGPPDIRPAFVHTSKTMVKETKKISRRYGIIQCDPLVLKGLE 2134
            IELLLQTAYIQPPA+QLA  PPDIRPAF+H+ +T+ KETK  SRRYGIIQCD LV KGLE
Sbjct: 380  IELLLQTAYIQPPANQLAVDPPDIRPAFLHSVRTVAKETKSASRRYGIIQCDELVFKGLE 439

Query: 2133 KTARHMVIPYIPMLVPPVKWTGYDKGAHLFLPSYVMRTHGSRQQREAVKRAPKKQLEPIF 1954
            +TARHMVIPY+PMLVPPVKWTGYDKG HL+LPSYVMRTHG+RQQREAVKRA + QL+P+F
Sbjct: 440  RTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLQPVF 499

Query: 1953 EALDTLGNTKWRVNKRVLSVVDRIWAGGGRLADLVDRKDIPLPERPDTEDEEQLXXXXXX 1774
            EALDTLG+TKWR+NKRVLSV+DRIWAGGGRLADLVDR D PLPE PDTEDE         
Sbjct: 500  EALDTLGSTKWRINKRVLSVIDRIWAGGGRLADLVDRDDAPLPEEPDTEDEALRTKWRWK 559

Query: 1773 XXXXXKENGEKHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPHLNHLGSDL 1594
                 KEN E+HSQRCDIELKLAVARKMKDE+GFFYPHN+DFRGRAYPMHPHLNHLGSD+
Sbjct: 560  VKSVKKENRERHSQRCDIELKLAVARKMKDEEGFFYPHNVDFRGRAYPMHPHLNHLGSDI 619

Query: 1593 CRGILEFADGRPLGESGLRWLKIHLANLYAGGVDKLSHDGRIAFTENHLDDIFDSSDKPL 1414
            CRG+L FA+GRPLGESGLRWLKIHLANL+AGGV+KLS +GRIAFTENH+DDIFDS+DKPL
Sbjct: 620  CRGVLVFAEGRPLGESGLRWLKIHLANLFAGGVEKLSLEGRIAFTENHMDDIFDSADKPL 679

Query: 1413 EGRRWWLKAEDPLQCLAVCINLSEALRSSSPETFYSHIPVHQDGSCNGLQHYAALGRDKL 1234
            EGRRWWL AEDP QCLAVCINLSEA+RSSSPET  SHIPVHQDGSCNGLQHYAALGRD+L
Sbjct: 680  EGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETSISHIPVHQDGSCNGLQHYAALGRDEL 739

Query: 1233 GAAAVNLVAGDKPADVYSGIAARVLDIMRQDAQKDPAIYPDALRARILINQVDRKLVKQT 1054
            GAAAVNLVAG+KPADVYSGIAARVLDIM++DAQ+DPA +PDA+RAR L+NQVDRKLVKQT
Sbjct: 740  GAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQRDPAEFPDAVRARALVNQVDRKLVKQT 799

Query: 1053 VMTSVYGVTYIGARDQIKRRLKERGTAIEDAELYGASCYAAKTTLTALGEMFEAARSIMS 874
            VMTSVYGVTYIGARDQIKRRLKERG   +D+EL+GA+CYAAK TLTALGEMFEAARSIM+
Sbjct: 800  VMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVTLTALGEMFEAARSIMT 859

Query: 873  WLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETEKIMVKRQR 694
            WLG+CAK+IASEN+PVRWTTPLGLPVVQPYRK+GRHLIKTSLQ+LTLQ+ETEK+MVKRQR
Sbjct: 860  WLGECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHLIKTSLQILTLQQETEKVMVKRQR 919

Query: 693  TAFPPNFVHSLDGSHMMMTAVACNKAGLNFAGVHDSYWTHACDVDEMSRILREKFVELYE 514
            TAFPPNF+HSLDGSHMMMTAVAC +AGLNFAGVHDSYWTHACDVD+++RILREKFVELYE
Sbjct: 920  TAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDKLNRILREKFVELYE 979

Query: 513  APILENLLESFQQSFPTLTFPPLPERGDFDLREVLKSPYFFN 388
             PILE LLESFQ S+PTL FPPLPERGDFDLR+VL+SPYFFN
Sbjct: 980  TPILEKLLESFQTSYPTLLFPPLPERGDFDLRDVLESPYFFN 1021


>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
            vinifera]
          Length = 978

 Score = 1416 bits (3666), Expect = 0.0
 Identities = 688/845 (81%), Positives = 759/845 (89%)
 Frame = -2

Query: 2922 MGQGKYQFLRRRQVKIETEAWEQAANEYKDLLKDMCEQKLAPNLPYIKSLFLGWFEPLCN 2743
            + QGK+  LRRRQ+K+ETEAWE+AA EY++LL DMCEQKLAPNLPYIKSLFLGWFEPL +
Sbjct: 135  VAQGKHNVLRRRQIKMETEAWEEAAKEYRELLSDMCEQKLAPNLPYIKSLFLGWFEPLRD 194

Query: 2742 AITAEQELCRQGKNRAAYARYFDLLPADMMSVITMHKLMGLVMIGGEHGSARVVQAACML 2563
             I AEQ+LC+QGKNRAAYA YFD LPADMM+VITMHKLMGL+M G  +GSARVVQAAC +
Sbjct: 195  VIAAEQDLCKQGKNRAAYAPYFDHLPADMMAVITMHKLMGLLMTGEGNGSARVVQAACHI 254

Query: 2562 GEAIEQEVRIHKFLEXXXXXKVDRDKNAGDRSEIVIQEQDKLRKKVTNLIKKQKLQAVRQ 2383
            GEAIE EVRI +F+E         +   G  S  V +EQ+KLRKKV+ L+KKQKLQ VRQ
Sbjct: 255  GEAIEHEVRIQRFMEKTKKKSASSNNPDGG-SNPVTKEQEKLRKKVSMLMKKQKLQQVRQ 313

Query: 2382 IVKGHDDLKPWGPEVRAKVGSRLIELLLQTAYIQPPADQLADGPPDIRPAFVHTSKTMVK 2203
            IVK  DD KPWG +   KVGSRLIELL++TAYIQPPADQL DGPPDIRPAFVHT KT++K
Sbjct: 314  IVKRQDDSKPWGQDANVKVGSRLIELLIETAYIQPPADQLGDGPPDIRPAFVHTLKTVIK 373

Query: 2202 ETKKISRRYGIIQCDPLVLKGLEKTARHMVIPYIPMLVPPVKWTGYDKGAHLFLPSYVMR 2023
            ET+K +RRYG+I+CDPLV KGLEKTARHMVIPY+PMLVPP+ WTGYDKGA+LFLPSYVMR
Sbjct: 374  ETQKGTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMR 433

Query: 2022 THGSRQQREAVKRAPKKQLEPIFEALDTLGNTKWRVNKRVLSVVDRIWAGGGRLADLVDR 1843
             HG+RQQREA+KRAP+K LEP FEAL+TLGNTKWR+NKRVL V+DRIWA GGRLADLVDR
Sbjct: 434  IHGARQQREAIKRAPRKALEPAFEALNTLGNTKWRINKRVLGVIDRIWASGGRLADLVDR 493

Query: 1842 KDIPLPERPDTEDEEQLXXXXXXXXXXXKENGEKHSQRCDIELKLAVARKMKDEDGFFYP 1663
            +D+PLPE PDTEDE ++           KEN E+HSQRCDIELKLAVARKMKDEDGFFYP
Sbjct: 494  EDVPLPEEPDTEDEAEIRKWKWKVRSVKKENSERHSQRCDIELKLAVARKMKDEDGFFYP 553

Query: 1662 HNLDFRGRAYPMHPHLNHLGSDLCRGILEFADGRPLGESGLRWLKIHLANLYAGGVDKLS 1483
            HNLDFRGRAYPMHP+LNHLGSDLCRGILEFA+GRPLG+SGLRWLKIHLAN+YAGGVDKLS
Sbjct: 554  HNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYAGGVDKLS 613

Query: 1482 HDGRIAFTENHLDDIFDSSDKPLEGRRWWLKAEDPLQCLAVCINLSEALRSSSPETFYSH 1303
            ++GR+AFTENHL+DIFDS+D+PLEGRRWWL AEDP QCLA CINLSEALRSSSPET  SH
Sbjct: 614  YEGRVAFTENHLEDIFDSADRPLEGRRWWLSAEDPFQCLATCINLSEALRSSSPETTISH 673

Query: 1302 IPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMRQDAQKDPA 1123
            +PVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG+KPADVYSGIAARVLDIM++DAQKDPA
Sbjct: 674  MPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMQRDAQKDPA 733

Query: 1122 IYPDALRARILINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGTAIEDAELYGAS 943
              P+ALRAR+LI+QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER    ++ E++ AS
Sbjct: 734  TEPNALRARLLISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIADEGEVFSAS 793

Query: 942  CYAAKTTLTALGEMFEAARSIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRHL 763
            CYAAKTTLTALGEMFEAARSIMSWLGDCAKVIASEN PVRW TPLGLPVVQPYRKLGRHL
Sbjct: 794  CYAAKTTLTALGEMFEAARSIMSWLGDCAKVIASENHPVRWNTPLGLPVVQPYRKLGRHL 853

Query: 762  IKTSLQVLTLQRETEKIMVKRQRTAFPPNFVHSLDGSHMMMTAVACNKAGLNFAGVHDSY 583
            IKTSLQVL+LQRET+K+MVKRQRTAFPPNFVHSLDGSHMMMTAVAC KAGLNFAGVHDSY
Sbjct: 854  IKTSLQVLSLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACQKAGLNFAGVHDSY 913

Query: 582  WTHACDVDEMSRILREKFVELYEAPILENLLESFQQSFPTLTFPPLPERGDFDLREVLKS 403
            WTHACDVDEM+RILREKFVELY  PILENLLE FQ+SFPTL FPPLPERGDFDLREVL+S
Sbjct: 914  WTHACDVDEMNRILREKFVELYGMPILENLLEGFQKSFPTLNFPPLPERGDFDLREVLES 973

Query: 402  PYFFN 388
            PYFFN
Sbjct: 974  PYFFN 978


>ref|XP_004232127.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like [Solanum lycopersicum]
          Length = 1022

 Score = 1406 bits (3639), Expect = 0.0
 Identities = 683/882 (77%), Positives = 766/882 (86%)
 Frame = -2

Query: 3033 DDSSVVDEIQXXXXXXXXXXXKHFQXXXXXXXXXXXGMGQGKYQFLRRRQVKIETEAWEQ 2854
            +D SVV E+Q           K F            G+ + KY  L RRQVKIET+AWEQ
Sbjct: 142  EDVSVVGEVQELLTELKKEEKKQFTFRRRKQRMLTSGIDRRKYPALMRRQVKIETQAWEQ 201

Query: 2853 AANEYKDLLKDMCEQKLAPNLPYIKSLFLGWFEPLCNAITAEQELCRQGKNRAAYARYFD 2674
            AA EY++LL DMCEQKLAPNLPY+KSLFLGWFEPL + I  EQELC QGK++AAY++YF 
Sbjct: 202  AAKEYRELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAQEQELCIQGKSKAAYSKYFH 261

Query: 2673 LLPADMMSVITMHKLMGLVMIGGEHGSARVVQAACMLGEAIEQEVRIHKFLEXXXXXKVD 2494
            LLPADMM+VITMHKLMGL+M GGEHG+ RVVQAA  +G+AIEQEVRIHKFLE     K +
Sbjct: 262  LLPADMMAVITMHKLMGLLMTGGEHGNVRVVQAALTIGDAIEQEVRIHKFLEKTEKHKAE 321

Query: 2493 RDKNAGDRSEIVIQEQDKLRKKVTNLIKKQKLQAVRQIVKGHDDLKPWGPEVRAKVGSRL 2314
            +D+N  D     + EQ KL KKVT+L+KKQKL+AV QIV+  DD KPWG + +AKVGSRL
Sbjct: 322  KDRNMEDGEHATL-EQKKLHKKVTSLMKKQKLRAVNQIVRSQDDSKPWGQDAKAKVGSRL 380

Query: 2313 IELLLQTAYIQPPADQLADGPPDIRPAFVHTSKTMVKETKKISRRYGIIQCDPLVLKGLE 2134
            IE LLQTAYIQ PADQLA  PPDIRPAF+H+++T+ KETK  SRRYG+IQCD LV KGLE
Sbjct: 381  IEFLLQTAYIQSPADQLAVDPPDIRPAFIHSTRTLAKETKSASRRYGVIQCDELVFKGLE 440

Query: 2133 KTARHMVIPYIPMLVPPVKWTGYDKGAHLFLPSYVMRTHGSRQQREAVKRAPKKQLEPIF 1954
            +TARHMVIPY+PMLVPPVKWTGYDKG HL+LPSYVMRTHG+RQQREAVKR  + QL+P+F
Sbjct: 441  RTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRTSRNQLQPVF 500

Query: 1953 EALDTLGNTKWRVNKRVLSVVDRIWAGGGRLADLVDRKDIPLPERPDTEDEEQLXXXXXX 1774
            EALDTLG+TKWR+NKRVLSVVDRIWAGGGRLADLVDR D+PLPE PDTEDE         
Sbjct: 501  EALDTLGSTKWRINKRVLSVVDRIWAGGGRLADLVDRDDVPLPEEPDTEDEAVCTKWRWK 560

Query: 1773 XXXXXKENGEKHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPHLNHLGSDL 1594
                 KEN E+HSQRCDIELKLAVA +MKDE+GFFYPHN+DFRGRAYPMHPHLNHLGSD+
Sbjct: 561  VKSVKKENRERHSQRCDIELKLAVAHRMKDEEGFFYPHNVDFRGRAYPMHPHLNHLGSDI 620

Query: 1593 CRGILEFADGRPLGESGLRWLKIHLANLYAGGVDKLSHDGRIAFTENHLDDIFDSSDKPL 1414
            CRG+LEFA GRPLG+SGLRWLKIHLANL+AGGVDKLS DGRIAFTE+HLDDIFDS+DKPL
Sbjct: 621  CRGVLEFAAGRPLGKSGLRWLKIHLANLFAGGVDKLSLDGRIAFTESHLDDIFDSADKPL 680

Query: 1413 EGRRWWLKAEDPLQCLAVCINLSEALRSSSPETFYSHIPVHQDGSCNGLQHYAALGRDKL 1234
            EGR WWL AEDP QCLAVCINLSEA+RSSSPET  SH+PVHQDGSCNGLQHYAALGRDKL
Sbjct: 681  EGRCWWLNAEDPFQCLAVCINLSEAVRSSSPETVISHVPVHQDGSCNGLQHYAALGRDKL 740

Query: 1233 GAAAVNLVAGDKPADVYSGIAARVLDIMRQDAQKDPAIYPDALRARILINQVDRKLVKQT 1054
            GAAAVNLVAG+KPADVYSGIAARVLDIM +DAQ+DPA +PDA+RAR+L+NQVDRKLVKQT
Sbjct: 741  GAAAVNLVAGEKPADVYSGIAARVLDIMNRDAQRDPAEFPDAVRARVLVNQVDRKLVKQT 800

Query: 1053 VMTSVYGVTYIGARDQIKRRLKERGTAIEDAELYGASCYAAKTTLTALGEMFEAARSIMS 874
            VMTSVYGVTYIGARDQIKRRLKERG   +D EL+GA+CYAAK TLTALGEMFEAARSIM+
Sbjct: 801  VMTSVYGVTYIGARDQIKRRLKERGAIADDTELFGAACYAAKVTLTALGEMFEAARSIMT 860

Query: 873  WLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETEKIMVKRQR 694
            WLG+CAK+IASEN+PVRWTTPLGLPVVQPYRK+GRH IKTSLQ+LTLQRETEK+MVKRQR
Sbjct: 861  WLGECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHFIKTSLQILTLQRETEKVMVKRQR 920

Query: 693  TAFPPNFVHSLDGSHMMMTAVACNKAGLNFAGVHDSYWTHACDVDEMSRILREKFVELYE 514
            TAFPPNF+HSLDGSHMMMTAVAC +AGLNFAGVHDSYWTHACDVD+++RILREKFVELYE
Sbjct: 921  TAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDKLNRILREKFVELYE 980

Query: 513  APILENLLESFQQSFPTLTFPPLPERGDFDLREVLKSPYFFN 388
             PILE LLE FQ S+PTL+FPPLPERGDFDLR+V++SPYFFN
Sbjct: 981  TPILEKLLEGFQVSYPTLSFPPLPERGDFDLRDVIESPYFFN 1022


>ref|XP_006338320.1| PREDICTED: DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial-like [Solanum tuberosum]
          Length = 1019

 Score = 1403 bits (3632), Expect = 0.0
 Identities = 685/882 (77%), Positives = 766/882 (86%)
 Frame = -2

Query: 3033 DDSSVVDEIQXXXXXXXXXXXKHFQXXXXXXXXXXXGMGQGKYQFLRRRQVKIETEAWEQ 2854
            +D SVV E+Q           K F            G+ + KY  L+RRQVKIET+AWE 
Sbjct: 139  EDVSVVGEVQELLTELKKEEKKQFTFRRRNQRLLTSGIDRRKYPALKRRQVKIETQAWEL 198

Query: 2853 AANEYKDLLKDMCEQKLAPNLPYIKSLFLGWFEPLCNAITAEQELCRQGKNRAAYARYFD 2674
            AA EY++LL DMCEQKLAPNLPY+KSLFLGWFEPL + I  EQELC QGK++AAY++YF 
Sbjct: 199  AAKEYRELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAQEQELCIQGKSKAAYSKYFH 258

Query: 2673 LLPADMMSVITMHKLMGLVMIGGEHGSARVVQAACMLGEAIEQEVRIHKFLEXXXXXKVD 2494
            LLPADMM+VITMHKLMGL+M GGEHG+ARVVQAA  +G+AIEQEVRIHKFLE     K +
Sbjct: 259  LLPADMMAVITMHKLMGLLMTGGEHGNARVVQAALTIGDAIEQEVRIHKFLEKTEKHKAE 318

Query: 2493 RDKNAGDRSEIVIQEQDKLRKKVTNLIKKQKLQAVRQIVKGHDDLKPWGPEVRAKVGSRL 2314
            +D+   D     + EQ KL KKVT+L+KKQKL+AV QIV+  DD KPWG + +AKVGSRL
Sbjct: 319  KDRKMEDGEHATL-EQKKLHKKVTSLMKKQKLRAVNQIVRSQDDSKPWGQDAKAKVGSRL 377

Query: 2313 IELLLQTAYIQPPADQLADGPPDIRPAFVHTSKTMVKETKKISRRYGIIQCDPLVLKGLE 2134
            IE LLQTAYIQ PADQLA  PPDIRPAF+H+++T+ KETK  SRRYG+IQCD LV KGLE
Sbjct: 378  IEFLLQTAYIQSPADQLAVDPPDIRPAFIHSTRTVAKETKSASRRYGVIQCDELVFKGLE 437

Query: 2133 KTARHMVIPYIPMLVPPVKWTGYDKGAHLFLPSYVMRTHGSRQQREAVKRAPKKQLEPIF 1954
            +TARHMVIPY+PMLVPPVKWTGYDKG HL+LPSYVMRTHG+RQQREAVKRA + QL P+F
Sbjct: 438  RTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLRPVF 497

Query: 1953 EALDTLGNTKWRVNKRVLSVVDRIWAGGGRLADLVDRKDIPLPERPDTEDEEQLXXXXXX 1774
            EALDTLG+TKWR+NKRVLSVVDRIWAGGGRLADLVDR D PLPE PDTEDE         
Sbjct: 498  EALDTLGSTKWRINKRVLSVVDRIWAGGGRLADLVDRDDAPLPEEPDTEDEAVCTKWRWK 557

Query: 1773 XXXXXKENGEKHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPHLNHLGSDL 1594
                 KEN E+HSQRCDIELKLAVA +MKDE+GFFYPHN+DFRGRAYPMHPHLNHLGSD+
Sbjct: 558  VKSVKKENRERHSQRCDIELKLAVAHRMKDEEGFFYPHNVDFRGRAYPMHPHLNHLGSDI 617

Query: 1593 CRGILEFADGRPLGESGLRWLKIHLANLYAGGVDKLSHDGRIAFTENHLDDIFDSSDKPL 1414
            CRG+LEFA GRPLGESGLRWLKIHLANL+AGGVDKLS DGRIAFTE+HLDDIFDS+DKPL
Sbjct: 618  CRGVLEFAAGRPLGESGLRWLKIHLANLFAGGVDKLSLDGRIAFTESHLDDIFDSADKPL 677

Query: 1413 EGRRWWLKAEDPLQCLAVCINLSEALRSSSPETFYSHIPVHQDGSCNGLQHYAALGRDKL 1234
            EGRRWWL AEDP QCLAVCINLSEA+RSSSPET  SHIPVHQDGSCNGLQHYAALGRDKL
Sbjct: 678  EGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETVISHIPVHQDGSCNGLQHYAALGRDKL 737

Query: 1233 GAAAVNLVAGDKPADVYSGIAARVLDIMRQDAQKDPAIYPDALRARILINQVDRKLVKQT 1054
            GAAAVNLVAG+KPADVYSGIAARVLDIM +DAQ+DPA +PDA+RAR+L+NQVDRKLVKQT
Sbjct: 738  GAAAVNLVAGEKPADVYSGIAARVLDIMNRDAQRDPAEFPDAVRARVLVNQVDRKLVKQT 797

Query: 1053 VMTSVYGVTYIGARDQIKRRLKERGTAIEDAELYGASCYAAKTTLTALGEMFEAARSIMS 874
            VMTSVYGVTYIGARDQIKRRLKERG   +D+EL+GA+ YAAK TLTALGEMFEAARSIM+
Sbjct: 798  VMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAASYAAKVTLTALGEMFEAARSIMT 857

Query: 873  WLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETEKIMVKRQR 694
            WL +CAK+IASEN+PVRWTTPLGLPVVQPYRK+GRH IKTSLQ+LTLQRETEK+MVKRQR
Sbjct: 858  WLAECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHFIKTSLQILTLQRETEKVMVKRQR 917

Query: 693  TAFPPNFVHSLDGSHMMMTAVACNKAGLNFAGVHDSYWTHACDVDEMSRILREKFVELYE 514
            TAFPPNF+HSLDGSHMMMTAVAC +AGLNFAGVHDSYWTHACDVD+++RILREKFVELYE
Sbjct: 918  TAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDKLNRILREKFVELYE 977

Query: 513  APILENLLESFQQSFPTLTFPPLPERGDFDLREVLKSPYFFN 388
             PILE LLESFQ S+PTL+FPPLPERGDFDLR+V++SPYFFN
Sbjct: 978  TPILEKLLESFQVSYPTLSFPPLPERGDFDLRDVIESPYFFN 1019


>ref|XP_004304185.1| PREDICTED: DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial-like [Fragaria vesca subsp.
            vesca]
          Length = 1262

 Score = 1402 bits (3630), Expect = 0.0
 Identities = 681/845 (80%), Positives = 757/845 (89%)
 Frame = -2

Query: 2922 MGQGKYQFLRRRQVKIETEAWEQAANEYKDLLKDMCEQKLAPNLPYIKSLFLGWFEPLCN 2743
            MG+GKY  LRRRQ+KIETEAWE+AA+EY++LL DMCEQKLAPNLPY+KSLFLGWFEPLCN
Sbjct: 422  MGEGKYLMLRRRQIKIETEAWERAADEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLCN 481

Query: 2742 AITAEQELCRQGKNRAAYARYFDLLPADMMSVITMHKLMGLVMIGGEHGSARVVQAACML 2563
            AIT EQ+LCRQGKN+ AY  Y D LPADMM+VITMHKLMGL+M G EHGS RVV AAC +
Sbjct: 482  AITKEQDLCRQGKNKTAYGPYMDKLPADMMAVITMHKLMGLLMTG-EHGSCRVVSAACTI 540

Query: 2562 GEAIEQEVRIHKFLEXXXXXKVDRDKNAGDRSEIVIQEQDKLRKKVTNLIKKQKLQAVRQ 2383
            GEAIEQEV+IH FLE     KV +D+  G+ S+  ++E +KL KKVTNLI+K+KLQAVR 
Sbjct: 541  GEAIEQEVKIHNFLERTKKKKVGKDQETGE-SDAAMKENEKLNKKVTNLIEKKKLQAVRH 599

Query: 2382 IVKGHDDLKPWGPEVRAKVGSRLIELLLQTAYIQPPADQLADGPPDIRPAFVHTSKTMVK 2203
            IV+GHDD K W  E +AKVGSR+IELL QTA+IQPPADQL D   DIRPAFVHT KT V 
Sbjct: 600  IVRGHDDSKAWSQEAKAKVGSRMIELLTQTAFIQPPADQLGDSLVDIRPAFVHTFKT-VS 658

Query: 2202 ETKKISRRYGIIQCDPLVLKGLEKTARHMVIPYIPMLVPPVKWTGYDKGAHLFLPSYVMR 2023
              K  SRRYG+I+C+PLVLKGLE+TARHMVIPY+PMLVPP+ WTGYDKG H +LPSYVMR
Sbjct: 659  NAKNTSRRYGVIECNPLVLKGLERTARHMVIPYMPMLVPPLNWTGYDKGGHFYLPSYVMR 718

Query: 2022 THGSRQQREAVKRAPKKQLEPIFEALDTLGNTKWRVNKRVLSVVDRIWAGGGRLADLVDR 1843
             HG++QQREAVK  P++QLEP+F+ALDTLGNT+WR+NKRV +VVDRIWA GGRLADLVDR
Sbjct: 719  IHGAKQQREAVKSTPREQLEPVFKALDTLGNTRWRINKRVFNVVDRIWANGGRLADLVDR 778

Query: 1842 KDIPLPERPDTEDEEQLXXXXXXXXXXXKENGEKHSQRCDIELKLAVARKMKDEDGFFYP 1663
             D+PL E+PDTEDE  L           KEN E+HSQRCDIELKLAVARKMKDE+GF++P
Sbjct: 779  SDVPLLEKPDTEDETLLKKWKWKVNNVKKENRERHSQRCDIELKLAVARKMKDEEGFYFP 838

Query: 1662 HNLDFRGRAYPMHPHLNHLGSDLCRGILEFADGRPLGESGLRWLKIHLANLYAGGVDKLS 1483
            HNLDFRGRAYPMHP+LNHLGSDLCRGILEFA+GRPLG+SGLRWLKIHLANLYAGGVDKLS
Sbjct: 839  HNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLS 898

Query: 1482 HDGRIAFTENHLDDIFDSSDKPLEGRRWWLKAEDPLQCLAVCINLSEALRSSSPETFYSH 1303
             +GR+AFTENHLDDIFDS D+PLEGRRWWLKAEDP QCLAVCINL+EALRSSSPETF SH
Sbjct: 899  LEGRLAFTENHLDDIFDSMDRPLEGRRWWLKAEDPFQCLAVCINLTEALRSSSPETFISH 958

Query: 1302 IPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMRQDAQKDPA 1123
            IPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG+KPADVYSGIAARVL+IM+ DAQKDP 
Sbjct: 959  IPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLNIMQSDAQKDPE 1018

Query: 1122 IYPDALRARILINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGTAIEDAELYGAS 943
            ++PDALRAR+L+NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERG AI + +++G +
Sbjct: 1019 VFPDALRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERG-AISEDDVFGCA 1077

Query: 942  CYAAKTTLTALGEMFEAARSIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRHL 763
            CYAAK TL ALG+MFEAARSIMSWLGDCAK+IASEN+ VRWTTPLGLPVVQPYRK GRHL
Sbjct: 1078 CYAAKVTLAALGQMFEAARSIMSWLGDCAKIIASENETVRWTTPLGLPVVQPYRKYGRHL 1137

Query: 762  IKTSLQVLTLQRETEKIMVKRQRTAFPPNFVHSLDGSHMMMTAVACNKAGLNFAGVHDSY 583
            IKTSLQ+LTLQRETEKIMVKRQRTAFPPNFVHSLDGSHMMMTAVAC +AGLNFAGVHDSY
Sbjct: 1138 IKTSLQILTLQRETEKIMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLNFAGVHDSY 1197

Query: 582  WTHACDVDEMSRILREKFVELYEAPILENLLESFQQSFPTLTFPPLPERGDFDLREVLKS 403
            WTHACDVD M+RILREKFVELYE PILE LLESFQQSFPTLTFPPLPERGDF+LR+VL+S
Sbjct: 1198 WTHACDVDVMNRILREKFVELYETPILERLLESFQQSFPTLTFPPLPERGDFELRDVLES 1257

Query: 402  PYFFN 388
            PYFFN
Sbjct: 1258 PYFFN 1262


>gb|EYU39350.1| hypothetical protein MIMGU_mgv1a000681mg [Mimulus guttatus]
          Length = 1021

 Score = 1387 bits (3589), Expect = 0.0
 Identities = 670/846 (79%), Positives = 756/846 (89%), Gaps = 1/846 (0%)
 Frame = -2

Query: 2922 MGQGKYQFLRRRQVKIETEAWEQAANEYKDLLKDMCEQKLAPNLPYIKSLFLGWFEPLCN 2743
            MG  K++ LRRRQVKIETEAWEQAA EY++LL DMCEQKLAPNLPY+KSLFLGWFEPL N
Sbjct: 177  MGNEKFKALRRRQVKIETEAWEQAAKEYRELLNDMCEQKLAPNLPYMKSLFLGWFEPLRN 236

Query: 2742 AITAEQELCRQGKNRAAYARYFDLLPADMMSVITMHKLMGLVMIGGEHGSARVVQAACML 2563
             I  EQE  R+GK++A+YA YFDLLPADMM+VITMHKLM L+M G EHG ARVV AAC++
Sbjct: 237  KIEEEQEFIRKGKSKASYANYFDLLPADMMAVITMHKLMALLMTG-EHGCARVVAAACVI 295

Query: 2562 GEAIEQEVRIHKFLEXXXXXKVDRD-KNAGDRSEIVIQEQDKLRKKVTNLIKKQKLQAVR 2386
            G+AIEQEVRIH FLE     KV +D +  GD+ +  IQEQ KLR+KVTNL+KKQKL+AVR
Sbjct: 296  GDAIEQEVRIHYFLEKTKKKKVTKDAETEGDKPDENIQEQAKLREKVTNLMKKQKLRAVR 355

Query: 2385 QIVKGHDDLKPWGPEVRAKVGSRLIELLLQTAYIQPPADQLADGPPDIRPAFVHTSKTMV 2206
            QIV    + + WG + +AKVGSRLIEL++QTAYIQPPA Q A+GPPDI+PAF+HT KT+ 
Sbjct: 356  QIVNRQIESQAWGQDAKAKVGSRLIELIIQTAYIQPPASQSAEGPPDIKPAFLHTFKTVA 415

Query: 2205 KETKKISRRYGIIQCDPLVLKGLEKTARHMVIPYIPMLVPPVKWTGYDKGAHLFLPSYVM 2026
            KE K  SRRYG+IQCDPLV KGLE+TARHMVIPY+PMLVPPVKWTGYDKGA+L+LPSYVM
Sbjct: 416  KEIKSNSRRYGVIQCDPLVRKGLERTARHMVIPYMPMLVPPVKWTGYDKGAYLYLPSYVM 475

Query: 2025 RTHGSRQQREAVKRAPKKQLEPIFEALDTLGNTKWRVNKRVLSVVDRIWAGGGRLADLVD 1846
            RTHG+RQQR+ VKRAP++QL+P+FEALDTLG+TKWRVNKRVLS++DRIWA GGRL DLVD
Sbjct: 476  RTHGARQQRDTVKRAPREQLKPVFEALDTLGSTKWRVNKRVLSIIDRIWASGGRLGDLVD 535

Query: 1845 RKDIPLPERPDTEDEEQLXXXXXXXXXXXKENGEKHSQRCDIELKLAVARKMKDEDGFFY 1666
            R DI LPE+PDTEDE  L           KEN E+HSQRCD ELKLAVARKMK+E+GFFY
Sbjct: 536  RDDILLPEQPDTEDESLLQKWKWKVKSIKKENSERHSQRCDTELKLAVARKMKEEEGFFY 595

Query: 1665 PHNLDFRGRAYPMHPHLNHLGSDLCRGILEFADGRPLGESGLRWLKIHLANLYAGGVDKL 1486
            PHN+DFRGRAYPMHPHLNHLGSD+CRGILEF++G+PLG+SGLRWLKIH+ANL+A GVDKL
Sbjct: 596  PHNVDFRGRAYPMHPHLNHLGSDICRGILEFSEGKPLGKSGLRWLKIHVANLFANGVDKL 655

Query: 1485 SHDGRIAFTENHLDDIFDSSDKPLEGRRWWLKAEDPLQCLAVCINLSEALRSSSPETFYS 1306
            SH+GRI F ENHLDD+FDS+D+PLEG+RWWL AEDP QCLA CINL EALR+ SPET  S
Sbjct: 656  SHEGRICFIENHLDDVFDSADRPLEGKRWWLNAEDPFQCLAACINLVEALRNPSPETTIS 715

Query: 1305 HIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMRQDAQKDP 1126
            HIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG+KPADVYSGIAARVLDIM++DAQKDP
Sbjct: 716  HIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMKEDAQKDP 775

Query: 1125 AIYPDALRARILINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGTAIEDAELYGA 946
            ++ PDAL AR+LINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER    ++ +++GA
Sbjct: 776  SVCPDALHARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDAFGDETQIFGA 835

Query: 945  SCYAAKTTLTALGEMFEAARSIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRH 766
            +CYAAK TLTALG+MFEAARSIM+WLGDCAK+IASEN+PVRWTTPLGLPVVQPYRK+GRH
Sbjct: 836  ACYAAKITLTALGQMFEAARSIMNWLGDCAKIIASENEPVRWTTPLGLPVVQPYRKVGRH 895

Query: 765  LIKTSLQVLTLQRETEKIMVKRQRTAFPPNFVHSLDGSHMMMTAVACNKAGLNFAGVHDS 586
            LIKTSLQVLTLQRET+K+MVKRQRTAFPPNFVHSLDGSHMMMTA+AC   GL FAGVHDS
Sbjct: 896  LIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACRNGGLTFAGVHDS 955

Query: 585  YWTHACDVDEMSRILREKFVELYEAPILENLLESFQQSFPTLTFPPLPERGDFDLREVLK 406
            YWTHACDVDEMSRILREKFVELYEAPILENLLE FQQSFPTLTFPPLP+RGDFDLR+VL+
Sbjct: 956  YWTHACDVDEMSRILREKFVELYEAPILENLLEGFQQSFPTLTFPPLPDRGDFDLRDVLE 1015

Query: 405  SPYFFN 388
            SPYFFN
Sbjct: 1016 SPYFFN 1021


>ref|XP_007032921.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
            gi|508711950|gb|EOY03847.1| DNA/RNA polymerases
            superfamily protein [Theobroma cacao]
          Length = 1100

 Score = 1380 bits (3573), Expect = 0.0
 Identities = 680/878 (77%), Positives = 760/878 (86%), Gaps = 5/878 (0%)
 Frame = -2

Query: 3033 DDSSVVDEIQXXXXXXXXXXXKHFQXXXXXXXXXXXGMGQGKYQFLRRRQVKIETEAWEQ 2854
            +D SVV+EI+           +              GMG+ KY+FLRRRQVKIETEAWEQ
Sbjct: 150  EDVSVVEEIKELLDEMKKEQRRETGNRRRRCQIIERGMGESKYRFLRRRQVKIETEAWEQ 209

Query: 2853 AANEYKDLLKDMCEQKLAPNLPYIKSLFLGWFEPLCNAITAEQELCRQGKNRAAYARYFD 2674
            AA EY++LL DMCE KLAPNLPYIKSLFLGWFEPL +AI  EQEL R GK RA YA Y D
Sbjct: 210  AAKEYRELLMDMCEHKLAPNLPYIKSLFLGWFEPLRDAIIKEQELYRLGKLRAGYAGYLD 269

Query: 2673 LLPADMMSVITMHKLMGLVMIGGEHGSARVVQAACMLGEAIEQEVRIHKFLEXXXXXKVD 2494
             LPADM +VITMHKLMGL+M GGEHG ARVVQAAC++G+AIEQEVRIHKFLE     +VD
Sbjct: 270  QLPADMTAVITMHKLMGLLMTGGEHGCARVVQAACLIGDAIEQEVRIHKFLEKTKKKRVD 329

Query: 2493 R-DKNAGDRSEIVIQEQDKLRKKVTNLIKKQKLQAVRQIVKGHDDLKPWGPEVRAKVGSR 2317
            + +++ GD+    I+EQ+KLRKKVT+LIKKQKL AVRQIVKG DD KPWG + +AKVGS 
Sbjct: 330  KKNEDEGDKPNAEIKEQEKLRKKVTDLIKKQKLPAVRQIVKGQDDTKPWGQDAKAKVGSH 389

Query: 2316 LIELLLQTAYIQPPADQLADGPPDIRPAFVHTSKTMVKETKKISRRYGIIQCDPLVLKGL 2137
            LIELL+QTAYIQPPADQLAD PPD+RPAFVH+ +T+VKE KK  RRYG+I+C+PLV KGL
Sbjct: 390  LIELLMQTAYIQPPADQLADCPPDVRPAFVHSLRTVVKENKKTGRRYGVIECNPLVRKGL 449

Query: 2136 EKTARHMVIPYIPMLVP----PVKWTGYDKGAHLFLPSYVMRTHGSRQQREAVKRAPKKQ 1969
            E+T+      +   L       VKWTGYD+GA+LF+PSY+MRTHG +QQREAVKR P+KQ
Sbjct: 450  ERTSMDPCKAHGDSLYANVGVKVKWTGYDRGAYLFIPSYIMRTHGVKQQREAVKRTPRKQ 509

Query: 1968 LEPIFEALDTLGNTKWRVNKRVLSVVDRIWAGGGRLADLVDRKDIPLPERPDTEDEEQLX 1789
            LEP+FEALDTLG TKWRVNKRVL+VVDRIW  GGRLADLVDRKD+PLPE+PD+EDE  L 
Sbjct: 510  LEPVFEALDTLGCTKWRVNKRVLNVVDRIWTSGGRLADLVDRKDVPLPEKPDSEDEAVLR 569

Query: 1788 XXXXXXXXXXKENGEKHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPHLNH 1609
                      KEN E+HS RCD+ELKLAVARKMKDE+GF+YPHNLDFRGRAYPMHP+LNH
Sbjct: 570  KWKWKVRSVKKENRERHSLRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNH 629

Query: 1608 LGSDLCRGILEFADGRPLGESGLRWLKIHLANLYAGGVDKLSHDGRIAFTENHLDDIFDS 1429
            LGSDLCRGILEF +GRPLG+SGLRWLKIHLANLYAGGVDKLSH GR+AF ENHLDDIFDS
Sbjct: 630  LGSDLCRGILEFGEGRPLGKSGLRWLKIHLANLYAGGVDKLSHGGRLAFAENHLDDIFDS 689

Query: 1428 SDKPLEGRRWWLKAEDPLQCLAVCINLSEALRSSSPETFYSHIPVHQDGSCNGLQHYAAL 1249
            +D+PLEG+RWWLKAEDP QCLAVCINL+EALRSSSPETF SHIPVHQDGSCNGLQHYAAL
Sbjct: 690  ADRPLEGKRWWLKAEDPFQCLAVCINLAEALRSSSPETFVSHIPVHQDGSCNGLQHYAAL 749

Query: 1248 GRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMRQDAQKDPAIYPDALRARILINQVDRK 1069
            GRDKLGAA+VNLVAG+KPADVYSGIAARVLDI+R+DAQKDPA++PDAL A++L+NQVDRK
Sbjct: 750  GRDKLGAASVNLVAGEKPADVYSGIAARVLDIIRRDAQKDPAVFPDALHAKVLVNQVDRK 809

Query: 1068 LVKQTVMTSVYGVTYIGARDQIKRRLKERGTAIEDAELYGASCYAAKTTLTALGEMFEAA 889
            LVKQTVMTSVYGVTYIGARDQIKRRLKERG   +D E++GASCYAAKTTLTALGEMF+AA
Sbjct: 810  LVKQTVMTSVYGVTYIGARDQIKRRLKERGVITDDKEIFGASCYAAKTTLTALGEMFQAA 869

Query: 888  RSIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETEKIM 709
            R+IM+WLG+CAK+IASENQPVRWTTPLGLPVVQPYR LGRHLIKTSLQVLTLQRETEK+M
Sbjct: 870  RAIMNWLGECAKIIASENQPVRWTTPLGLPVVQPYRVLGRHLIKTSLQVLTLQRETEKVM 929

Query: 708  VKRQRTAFPPNFVHSLDGSHMMMTAVACNKAGLNFAGVHDSYWTHACDVDEMSRILREKF 529
            VKRQRTAFPPNFVHSLDGSHMMMTAVAC KAGL FAGVHDSYWTHA DVD+M+RILREKF
Sbjct: 930  VKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLTFAGVHDSYWTHASDVDKMNRILREKF 989

Query: 528  VELYEAPILENLLESFQQSFPTLTFPPLPERGDFDLRE 415
            VELYE PILENLLESFQQSFPTL FPPLPERGDFDLR+
Sbjct: 990  VELYEVPILENLLESFQQSFPTLCFPPLPERGDFDLRD 1027


>ref|XP_006602976.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like isoform X1 [Glycine max]
          Length = 1046

 Score = 1379 bits (3569), Expect = 0.0
 Identities = 674/849 (79%), Positives = 751/849 (88%), Gaps = 4/849 (0%)
 Frame = -2

Query: 2922 MGQGKYQFLRRRQVKIETEAWEQAANEYKDLLKDMCEQKLAPNLPYIKSLFLGWFEPLCN 2743
            +GQ +YQ LRRRQVKIETE WE+AA EY++LL DMCE KLAPNLPY+KSLFLGWFEPL +
Sbjct: 198  VGQSRYQELRRRQVKIETEMWEEAAKEYRELLMDMCEHKLAPNLPYMKSLFLGWFEPLRD 257

Query: 2742 AITAEQELCRQGKNRAAYARYFDLLPADMMSVITMHKLMGLVMIGGEH---GSARVVQAA 2572
            AI  EQE+  +GKNR AYA YF  LPAD M+VI MHKLMGL+M G E    G+ARVVQAA
Sbjct: 258  AIVKEQEMYSEGKNRMAYAPYFVQLPADKMAVIAMHKLMGLLMTGNERVTIGTARVVQAA 317

Query: 2571 CMLGEAIEQEVRIHKFLEXXXXXKVDR-DKNAGDRSEIVIQEQDKLRKKVTNLIKKQKLQ 2395
            C +G+AIE EVRIHKFLE     K DR +KN    S   I+E+ KLRKKV +L+KKQKL 
Sbjct: 318  CGIGDAIENEVRIHKFLEKTKKKKGDRSNKNKAGESVADIKEEQKLRKKVIDLMKKQKLV 377

Query: 2394 AVRQIVKGHDDLKPWGPEVRAKVGSRLIELLLQTAYIQPPADQLADGPPDIRPAFVHTSK 2215
            AVR +VKG DD KPWG  ++ KVGSRLIELLLQTAYIQPP+DQL D  PDIRPAFVH+ K
Sbjct: 378  AVRGLVKGKDDTKPWGAVIKTKVGSRLIELLLQTAYIQPPSDQLPDAAPDIRPAFVHSFK 437

Query: 2214 TMVKETKKISRRYGIIQCDPLVLKGLEKTARHMVIPYIPMLVPPVKWTGYDKGAHLFLPS 2035
            T+ KE+ K SRRYGIIQCDPL+LKGLE+TA++MVIPY+PMLVPPV WTGYDKG HLFLPS
Sbjct: 438  TVTKESIKASRRYGIIQCDPLILKGLERTAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPS 497

Query: 2034 YVMRTHGSRQQREAVKRAPKKQLEPIFEALDTLGNTKWRVNKRVLSVVDRIWAGGGRLAD 1855
            YVMRTHG RQQREAVKRAP+KQLEP+FEALDTLG+TKWRVNK+VLSVVDRIWA GGR+AD
Sbjct: 498  YVMRTHGVRQQREAVKRAPRKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRIAD 557

Query: 1854 LVDRKDIPLPERPDTEDEEQLXXXXXXXXXXXKENGEKHSQRCDIELKLAVARKMKDEDG 1675
            LVDR D+PLP+ PDT+DE ++           KEN E++SQRCDIELKLAVARKMKDE+G
Sbjct: 558  LVDRDDVPLPDEPDTDDEAKIKKWKWKYKSLQKENRERYSQRCDIELKLAVARKMKDEEG 617

Query: 1674 FFYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFADGRPLGESGLRWLKIHLANLYAGGV 1495
            F+YPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFA+GR LG+SGLRWLKIHLANLYAGGV
Sbjct: 618  FYYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRSLGKSGLRWLKIHLANLYAGGV 677

Query: 1494 DKLSHDGRIAFTENHLDDIFDSSDKPLEGRRWWLKAEDPLQCLAVCINLSEALRSSSPET 1315
            DKLS++GR+AFTENH +DIFDS+DKPLEGRRWWLKAEDPLQCLAVCI L+EALRSSSPET
Sbjct: 678  DKLSYEGRLAFTENHFEDIFDSADKPLEGRRWWLKAEDPLQCLAVCITLTEALRSSSPET 737

Query: 1314 FYSHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMRQDAQ 1135
            F SHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLV G+KPADVYSGIAARV +IM++DAQ
Sbjct: 738  FISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVTGEKPADVYSGIAARVSNIMQRDAQ 797

Query: 1134 KDPAIYPDALRARILINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGTAIEDAEL 955
            KDPA++ DAL AR L+NQVDRKLVKQTVMTSVYGVTYIGAR+QIKRRLKER    +D EL
Sbjct: 798  KDPAVFRDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERNAISDDKEL 857

Query: 954  YGASCYAAKTTLTALGEMFEAARSIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKL 775
            +GASCYAAK TLTAL EMF+ AR IMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKL
Sbjct: 858  FGASCYAAKVTLTALEEMFQGARGIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKL 917

Query: 774  GRHLIKTSLQVLTLQRETEKIMVKRQRTAFPPNFVHSLDGSHMMMTAVACNKAGLNFAGV 595
            G+H+IKTSLQ+LTLQRET+K+MV RQRTAFPPNFVHSLDGSHMMMTAVAC K GL+FAGV
Sbjct: 918  GKHIIKTSLQILTLQRETDKVMVTRQRTAFPPNFVHSLDGSHMMMTAVACKKEGLSFAGV 977

Query: 594  HDSYWTHACDVDEMSRILREKFVELYEAPILENLLESFQQSFPTLTFPPLPERGDFDLRE 415
            HDSYWTHACDVD+M+RILREKFVELYE P+LENLLESFQ SFP+L+FP LPERGDFDL+E
Sbjct: 978  HDSYWTHACDVDKMNRILREKFVELYETPVLENLLESFQSSFPSLSFPSLPERGDFDLKE 1037

Query: 414  VLKSPYFFN 388
            VL+SPYFFN
Sbjct: 1038 VLESPYFFN 1046


>ref|XP_003530460.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like isoform X1 [Glycine max]
          Length = 1015

 Score = 1376 bits (3562), Expect = 0.0
 Identities = 670/849 (78%), Positives = 751/849 (88%), Gaps = 4/849 (0%)
 Frame = -2

Query: 2922 MGQGKYQFLRRRQVKIETEAWEQAANEYKDLLKDMCEQKLAPNLPYIKSLFLGWFEPLCN 2743
            +GQ +YQ LRRRQVKIETE WE+AA EY++LL DMCE KLAPNLPY+KSLFLGWFEPL +
Sbjct: 167  VGQCRYQELRRRQVKIETETWEEAAKEYRELLMDMCEHKLAPNLPYMKSLFLGWFEPLRD 226

Query: 2742 AITAEQELCRQGKNRAAYARYFDLLPADMMSVITMHKLMGLVMIGGEH---GSARVVQAA 2572
            AI  EQE+  +GKNR AY  YF  LPAD M+VI MHKLMGL+M G EH   G+ARVVQAA
Sbjct: 227  AIVKEQEMYGEGKNRTAYVPYFVQLPADKMAVIAMHKLMGLLMTGTEHATVGTARVVQAA 286

Query: 2571 CMLGEAIEQEVRIHKFLEXXXXXKVDRDK-NAGDRSEIVIQEQDKLRKKVTNLIKKQKLQ 2395
            C +G+AIE EVRIHKFLE     K DR K N    S   I+E+ KLRKKV +L+KKQKL 
Sbjct: 287  CGIGDAIENEVRIHKFLEKTKKKKGDRSKKNKASESVADIKEEQKLRKKVIDLMKKQKLV 346

Query: 2394 AVRQIVKGHDDLKPWGPEVRAKVGSRLIELLLQTAYIQPPADQLADGPPDIRPAFVHTSK 2215
            AVR +VKG DD KPWG  ++ KVGSRLIELL+QTAYIQPP DQL D  PDIRPAFVH+ +
Sbjct: 347  AVRGLVKGKDDTKPWGAAIKTKVGSRLIELLMQTAYIQPPPDQLLDAAPDIRPAFVHSFR 406

Query: 2214 TMVKETKKISRRYGIIQCDPLVLKGLEKTARHMVIPYIPMLVPPVKWTGYDKGAHLFLPS 2035
            T+ K + K S+RYGI+QCDPL+LKGLE+TA++MVIPY+PMLVPPV W+GYDKG HLFLPS
Sbjct: 407  TVAKVSAKASKRYGIVQCDPLILKGLERTAKNMVIPYMPMLVPPVNWSGYDKGGHLFLPS 466

Query: 2034 YVMRTHGSRQQREAVKRAPKKQLEPIFEALDTLGNTKWRVNKRVLSVVDRIWAGGGRLAD 1855
            YVMRTHG+RQQREAVKRAP+KQLEP+FEALDTLG+TKWRVNK+VLSVVDRIWA GGR+AD
Sbjct: 467  YVMRTHGARQQREAVKRAPRKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRIAD 526

Query: 1854 LVDRKDIPLPERPDTEDEEQLXXXXXXXXXXXKENGEKHSQRCDIELKLAVARKMKDEDG 1675
            LVDR D+PLP++P T+DEE++           KEN E++SQRCDIELKLAVARKMKDE+G
Sbjct: 527  LVDRDDVPLPDKPVTDDEEKIKKWKWKCKSLQKENRERYSQRCDIELKLAVARKMKDEEG 586

Query: 1674 FFYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFADGRPLGESGLRWLKIHLANLYAGGV 1495
            F+YPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFA+GR LG+SGL+WLKIHLANLYAGGV
Sbjct: 587  FYYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRFLGKSGLQWLKIHLANLYAGGV 646

Query: 1494 DKLSHDGRIAFTENHLDDIFDSSDKPLEGRRWWLKAEDPLQCLAVCINLSEALRSSSPET 1315
            DKLSH+GR+ FTENH +DIFDS+DKPL+GRRWWLKAEDPLQCLAVCI L+EALRSSSPET
Sbjct: 647  DKLSHEGRLVFTENHFEDIFDSADKPLQGRRWWLKAEDPLQCLAVCITLTEALRSSSPET 706

Query: 1314 FYSHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMRQDAQ 1135
            F SHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG+KPADVYSGIAARV +IM++DAQ
Sbjct: 707  FISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVSNIMQRDAQ 766

Query: 1134 KDPAIYPDALRARILINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGTAIEDAEL 955
            KDPAI+PDAL AR L+NQVDRKLVKQTVMTSVYGVTYIGAR+QIKRRLKER    +D EL
Sbjct: 767  KDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERNAISDDTEL 826

Query: 954  YGASCYAAKTTLTALGEMFEAARSIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKL 775
            +GASCYAAK TLTAL EMF+ AR IM+WLGDCAKVIASENQPVRWTTPLGLPVVQPYRKL
Sbjct: 827  FGASCYAAKVTLTALEEMFQGARGIMNWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKL 886

Query: 774  GRHLIKTSLQVLTLQRETEKIMVKRQRTAFPPNFVHSLDGSHMMMTAVACNKAGLNFAGV 595
            G+H+IKTSLQ+LTLQRET+K+MV RQRTAFPPNFVHSLDGSHMMMTAVAC K GLNFAGV
Sbjct: 887  GKHIIKTSLQMLTLQRETDKVMVTRQRTAFPPNFVHSLDGSHMMMTAVACKKEGLNFAGV 946

Query: 594  HDSYWTHACDVDEMSRILREKFVELYEAPILENLLESFQQSFPTLTFPPLPERGDFDLRE 415
            HDSYWTHACDVD+M+RILREKFVELYE P+LENLLESFQ SFP+L+FP LPERGDFDLRE
Sbjct: 947  HDSYWTHACDVDKMNRILREKFVELYETPVLENLLESFQSSFPSLSFPSLPERGDFDLRE 1006

Query: 414  VLKSPYFFN 388
            VL+SPYFFN
Sbjct: 1007 VLESPYFFN 1015


>ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like [Solanum
            tuberosum]
          Length = 993

 Score = 1374 bits (3556), Expect = 0.0
 Identities = 666/847 (78%), Positives = 753/847 (88%), Gaps = 2/847 (0%)
 Frame = -2

Query: 2922 MGQGKYQFLRRRQVKIETEAWEQAANEYKDLLKDMCEQKLAPNLPYIKSLFLGWFEPLCN 2743
            MG GKY  LRRRQ+K+ETEAWE AA EY++LL DMCEQKLAPNLPYIKSLFLGWFEPL +
Sbjct: 153  MGIGKYNLLRRRQIKVETEAWEDAAKEYQELLMDMCEQKLAPNLPYIKSLFLGWFEPLRD 212

Query: 2742 AITAEQELCRQGKNRAAYARYFDLLPADMMSVITMHKLMGLVMIGGEHGSARVVQAACML 2563
            AI AEQ+LC +GKNR AYA +FD LPA+MM+VITMHKLMGL+M GG  GSARVVQAA  +
Sbjct: 213  AIAAEQKLCDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGSGSARVVQAASHI 272

Query: 2562 GEAIEQEVRIHKFLEXXXXXKVDR--DKNAGDRSEIVIQEQDKLRKKVTNLIKKQKLQAV 2389
            GEAIE E RIH+FLE      +D   ++ AGD    +++E+++LRKKV  L+KKQKLQ V
Sbjct: 273  GEAIEHEARIHRFLEKTKKNALDGSLEETAGD----IMKERERLRKKVKILMKKQKLQQV 328

Query: 2388 RQIVKGHDDLKPWGPEVRAKVGSRLIELLLQTAYIQPPADQLADGPPDIRPAFVHTSKTM 2209
            R+IVK  DD KPWG +   KVG +LI++L++TAYIQPP DQL D PPDIRPAF+HT KT+
Sbjct: 329  RKIVKQQDDEKPWGQDNLVKVGCKLIQILIETAYIQPPNDQLDDCPPDIRPAFMHTLKTV 388

Query: 2208 VKETKKISRRYGIIQCDPLVLKGLEKTARHMVIPYIPMLVPPVKWTGYDKGAHLFLPSYV 2029
              ET K SRRYG+IQCDPLV KGL+KTARHMVIPY+PMLVPP  W+GYD+GA+LFLPSY+
Sbjct: 389  --ETVKGSRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQNWSGYDRGAYLFLPSYI 446

Query: 2028 MRTHGSRQQREAVKRAPKKQLEPIFEALDTLGNTKWRVNKRVLSVVDRIWAGGGRLADLV 1849
            MRTHG++QQREAVKR PKKQLEP+F+ALDTLGNTKWRVNKRVL ++DRIWA GGRLADLV
Sbjct: 447  MRTHGAKQQREAVKRVPKKQLEPVFQALDTLGNTKWRVNKRVLGILDRIWASGGRLADLV 506

Query: 1848 DRKDIPLPERPDTEDEEQLXXXXXXXXXXXKENGEKHSQRCDIELKLAVARKMKDEDGFF 1669
            DR+D+PLPE PDTEDEE++           KEN E+HSQRCDIELKLAVARKMKDE+GF+
Sbjct: 507  DREDVPLPEEPDTEDEEEIKKWKWKVKAAKKENCERHSQRCDIELKLAVARKMKDEEGFY 566

Query: 1668 YPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFADGRPLGESGLRWLKIHLANLYAGGVDK 1489
            YPHNLDFRGRAYPMHP+LNHLGSDLCRGILEF++GRPLG+SGLRWLKIHLAN+Y GGVDK
Sbjct: 567  YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFSEGRPLGKSGLRWLKIHLANVYGGGVDK 626

Query: 1488 LSHDGRIAFTENHLDDIFDSSDKPLEGRRWWLKAEDPLQCLAVCINLSEALRSSSPETFY 1309
            LS++GR AF+ENH++DIFDS+D+PLEGRRWWL AEDP QCLA CIN+SEALRS SPET  
Sbjct: 627  LSYEGRAAFSENHVEDIFDSADRPLEGRRWWLGAEDPFQCLATCINISEALRSPSPETSI 686

Query: 1308 SHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMRQDAQKD 1129
            SH+P+HQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIM++DA KD
Sbjct: 687  SHMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDADKD 746

Query: 1128 PAIYPDALRARILINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGTAIEDAELYG 949
            PA  P+ +RAR+LINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERG   +D EL+ 
Sbjct: 747  PATDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIEDDNELFS 806

Query: 948  ASCYAAKTTLTALGEMFEAARSIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGR 769
            A+CYAAKTTLTALGEMFEAARSIMSWLGDCAK+IA ENQPVRWTTPLGLPVVQPYRKLGR
Sbjct: 807  AACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENQPVRWTTPLGLPVVQPYRKLGR 866

Query: 768  HLIKTSLQVLTLQRETEKIMVKRQRTAFPPNFVHSLDGSHMMMTAVACNKAGLNFAGVHD 589
            HLIKTSLQ+LTLQRET+K+MVKRQRTAFPPNFVHSLDGSHMMMTA+ C +AGL+FAGVHD
Sbjct: 867  HLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAITCKEAGLSFAGVHD 926

Query: 588  SYWTHACDVDEMSRILREKFVELYEAPILENLLESFQQSFPTLTFPPLPERGDFDLREVL 409
            SYWTHA DVD+M++ILREKFVELY+APILENLLESFQQSFP L FPPLPERGDFDLREVL
Sbjct: 927  SYWTHASDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVL 986

Query: 408  KSPYFFN 388
            +SPYFFN
Sbjct: 987  ESPYFFN 993


>ref|XP_007225383.1| hypothetical protein PRUPE_ppa000780mg [Prunus persica]
            gi|462422319|gb|EMJ26582.1| hypothetical protein
            PRUPE_ppa000780mg [Prunus persica]
          Length = 1006

 Score = 1371 bits (3548), Expect = 0.0
 Identities = 663/860 (77%), Positives = 747/860 (86%), Gaps = 15/860 (1%)
 Frame = -2

Query: 2922 MGQGKYQFLRRRQVKIETEAWEQAANEYKDLLKDMCEQKLAPNLPYIKSLFLGWFEPLCN 2743
            MG GKY  LR+RQ+K+ETEAW++AA EY++LL DMCEQKLAPNLPYIKSLFLGWFEPL +
Sbjct: 147  MGVGKYNLLRKRQIKLETEAWQEAAKEYQELLADMCEQKLAPNLPYIKSLFLGWFEPLRD 206

Query: 2742 AITAEQELCRQGKNRAAYARYFDLLPADMMSVITMHKLMGLVMIG-GEHGSARVVQAACM 2566
            AI A+Q+ C+Q  +R ++A YFD LPAD M+VITMHKLMGL+M   G  GS RVVQAAC 
Sbjct: 207  AIAADQDSCKQPNSRQSHAPYFDHLPADKMAVITMHKLMGLLMTNNGGIGSVRVVQAACA 266

Query: 2565 LGEAIEQEVRIHKFLEXXXXXKVDRDKNA--------------GDRSEIVIQEQDKLRKK 2428
            +GEAIE EVRIH+FLE     K   DK A               D  E + +EQ++LRKK
Sbjct: 267  IGEAIEHEVRIHRFLEKTKKKKNTIDKKAEADSVPVTIEQEKLADEQEKLTKEQERLRKK 326

Query: 2427 VTNLIKKQKLQAVRQIVKGHDDLKPWGPEVRAKVGSRLIELLLQTAYIQPPADQLADGPP 2248
            V  LIK+QK+Q VR IVK  +DLKPWG E   KVG RLI+LL+ TAYIQPP DQ+ DGPP
Sbjct: 327  VNKLIKRQKMQQVRGIVKEQEDLKPWGQEAHVKVGCRLIQLLMDTAYIQPPVDQIGDGPP 386

Query: 2247 DIRPAFVHTSKTMVKETKKISRRYGIIQCDPLVLKGLEKTARHMVIPYIPMLVPPVKWTG 2068
            DIRPAFVH  KT+ ++T+K SRRYG+I+CDP+V KG+EKTARHMV+PY+PMLVPP+ WTG
Sbjct: 387  DIRPAFVHNLKTITRDTQKTSRRYGVIECDPIVRKGMEKTARHMVMPYMPMLVPPINWTG 446

Query: 2067 YDKGAHLFLPSYVMRTHGSRQQREAVKRAPKKQLEPIFEALDTLGNTKWRVNKRVLSVVD 1888
            YD+GA+LFLPSYVMRTHG++QQRE VKR P+KQLEP+FEALDTLG+TKWRVNKRVL V+D
Sbjct: 447  YDRGAYLFLPSYVMRTHGAKQQREVVKRTPRKQLEPVFEALDTLGSTKWRVNKRVLGVID 506

Query: 1887 RIWAGGGRLADLVDRKDIPLPERPDTEDEEQLXXXXXXXXXXXKENGEKHSQRCDIELKL 1708
            RIWA GGRLADLVDR+D+PLPE PDTEDE ++           KEN E+HSQRCDIELKL
Sbjct: 507  RIWASGGRLADLVDREDVPLPEEPDTEDEAEIRKWKWKLKAAKKENSERHSQRCDIELKL 566

Query: 1707 AVARKMKDEDGFFYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFADGRPLGESGLRWLK 1528
            A +RKMKDE+GF+YPHNLDFRGRAYPMHP+LNHLGSD+CRGILEF++GR LG+SGLRWLK
Sbjct: 567  AASRKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDMCRGILEFSEGRHLGKSGLRWLK 626

Query: 1527 IHLANLYAGGVDKLSHDGRIAFTENHLDDIFDSSDKPLEGRRWWLKAEDPLQCLAVCINL 1348
            IHLANLYAGGVDKLS D R AFTENH+D+IFDS+D+PLEGRRWWL AEDP QCLA CINL
Sbjct: 627  IHLANLYAGGVDKLSFDDRAAFTENHVDEIFDSADRPLEGRRWWLGAEDPFQCLAACINL 686

Query: 1347 SEALRSSSPETFYSHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAA 1168
             EALRS SPET  S++PVHQDGSCNGLQHYAALGRDKLGAAAVNLV GDKPADVYSGIAA
Sbjct: 687  CEALRSPSPETTISYMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVGGDKPADVYSGIAA 746

Query: 1167 RVLDIMRQDAQKDPAIYPDALRARILINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK 988
            RVLDIMR DA+KDPA  P+AL AR+LINQVDRKLVKQTVMTSVYGVTY+GARDQIKRRLK
Sbjct: 747  RVLDIMRNDAEKDPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLK 806

Query: 987  ERGTAIEDAELYGASCYAAKTTLTALGEMFEAARSIMSWLGDCAKVIASENQPVRWTTPL 808
            ERG+  +D  L+ A+CYAA+TTLTALGEMFEAARSIMSWLG+CAKVIASENQPVRW TPL
Sbjct: 807  ERGSIADDTALFAAACYAARTTLTALGEMFEAARSIMSWLGECAKVIASENQPVRWITPL 866

Query: 807  GLPVVQPYRKLGRHLIKTSLQVLTLQRETEKIMVKRQRTAFPPNFVHSLDGSHMMMTAVA 628
            GLPVVQPYR+LGRHLIKTSLQVLTLQRET+K+MVKRQRTAFPPNFVHSLDGSHMMMTAVA
Sbjct: 867  GLPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVA 926

Query: 627  CNKAGLNFAGVHDSYWTHACDVDEMSRILREKFVELYEAPILENLLESFQQSFPTLTFPP 448
            C KAGLNFAGVHDSYWTHACD+DEM+RILREKFVELYEAPILENLLE FQQSFPTLTFPP
Sbjct: 927  CKKAGLNFAGVHDSYWTHACDIDEMNRILREKFVELYEAPILENLLEGFQQSFPTLTFPP 986

Query: 447  LPERGDFDLREVLKSPYFFN 388
            LP+RGDFDLR+VL+SPYFFN
Sbjct: 987  LPDRGDFDLRDVLESPYFFN 1006


>sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymerase 1B, mitochondrial; AltName:
            Full=NictaRpoT1-tom; AltName: Full=T7 bacteriophage-type
            single subunit RNA polymerase 1B; Flags: Precursor
          Length = 1002

 Score = 1371 bits (3548), Expect = 0.0
 Identities = 663/848 (78%), Positives = 752/848 (88%), Gaps = 3/848 (0%)
 Frame = -2

Query: 2922 MGQGKYQFLRRRQVKIETEAWEQAANEYKDLLKDMCEQKLAPNLPYIKSLFLGWFEPLCN 2743
            MG GKY FLRRRQ+K+ETEAWE+AA EY++LL DMCEQKLAPNLPY+KSLFLGWFEPL +
Sbjct: 161  MGVGKYNFLRRRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRD 220

Query: 2742 AITAEQELCRQGKNRAAYARYFDLLPADMMSVITMHKLMGLVMIGGEHGSARVVQAACML 2563
            AI AEQ+LC +GKNR AYA +FD LPA+MM+VITMHKLMGL+M GG  GSARVVQAA  +
Sbjct: 221  AIAAEQKLCDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASYI 280

Query: 2562 GEAIEQEVRIHKFLEXXXXXKV---DRDKNAGDRSEIVIQEQDKLRKKVTNLIKKQKLQA 2392
            GEAIE E RIH+FLE          D ++  GD    +++E+++LRKKV  L+KKQKL+ 
Sbjct: 281  GEAIEHEARIHRFLEKTKKSNALSGDLEETPGD----MMKERERLRKKVKILMKKQKLRQ 336

Query: 2391 VRQIVKGHDDLKPWGPEVRAKVGSRLIELLLQTAYIQPPADQLADGPPDIRPAFVHTSKT 2212
            VR+IVK  DD KPWG +   KVG RLI++L++TAYIQPP DQL DGPPDIRPAFVHT KT
Sbjct: 337  VRKIVKQQDDEKPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDGPPDIRPAFVHTLKT 396

Query: 2211 MVKETKKISRRYGIIQCDPLVLKGLEKTARHMVIPYIPMLVPPVKWTGYDKGAHLFLPSY 2032
            +  ET K SRRYG+IQCDPLV KGL+KTARHMVIPY+PMLVPP  W GYDKG +LFLPSY
Sbjct: 397  V--ETMKGSRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSY 454

Query: 2031 VMRTHGSRQQREAVKRAPKKQLEPIFEALDTLGNTKWRVNKRVLSVVDRIWAGGGRLADL 1852
            +MRTHG++QQREAVKR PKKQLEP+F+ALDTLGNTKWRVN++VL +VDRIWA GGRLADL
Sbjct: 455  IMRTHGAKQQREAVKRVPKKQLEPVFQALDTLGNTKWRVNRKVLGIVDRIWASGGRLADL 514

Query: 1851 VDRKDIPLPERPDTEDEEQLXXXXXXXXXXXKENGEKHSQRCDIELKLAVARKMKDEDGF 1672
            VDR+D+PLPE PDTEDE ++           KEN E+HSQRCDIELKLAVARKMKDEDGF
Sbjct: 515  VDREDVPLPEAPDTEDEAEIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGF 574

Query: 1671 FYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFADGRPLGESGLRWLKIHLANLYAGGVD 1492
            +YPHNLDFRGRAYPMHP+LNHLGSDLCRGILEFA+GRPLG SGLRWLKIHLAN+Y GGVD
Sbjct: 575  YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVD 634

Query: 1491 KLSHDGRIAFTENHLDDIFDSSDKPLEGRRWWLKAEDPLQCLAVCINLSEALRSSSPETF 1312
            KLS++GR+AF+ENHL+DIFDS+++PLEG+RWWL AEDP QCLA CIN++EALRS SPET 
Sbjct: 635  KLSYEGRVAFSENHLEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETA 694

Query: 1311 YSHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMRQDAQK 1132
             S++P+HQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIM++DA K
Sbjct: 695  ISYMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAK 754

Query: 1131 DPAIYPDALRARILINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGTAIEDAELY 952
            DPA  P+ +RAR+LINQVDRKLVKQTVMTSVYGVTYIGARDQIK+RLKERG   +D EL+
Sbjct: 755  DPANDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNELF 814

Query: 951  GASCYAAKTTLTALGEMFEAARSIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLG 772
             A+CYAAKTTLTALGEMFEAARSIMSWLGDCAK+IA EN PVRWTTPLGLPVVQPYRKLG
Sbjct: 815  AAACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLG 874

Query: 771  RHLIKTSLQVLTLQRETEKIMVKRQRTAFPPNFVHSLDGSHMMMTAVACNKAGLNFAGVH 592
            RHLIKTSLQ+LTLQRET+K+MVKRQRTAFPPNFVHSLDGSHMMMTA+AC ++GL+FAGVH
Sbjct: 875  RHLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVH 934

Query: 591  DSYWTHACDVDEMSRILREKFVELYEAPILENLLESFQQSFPTLTFPPLPERGDFDLREV 412
            DSYWTHACDVD+M++ILREKFVELY+APILENLLESFQQSFP L FPPLPERGDFDLREV
Sbjct: 935  DSYWTHACDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREV 994

Query: 411  LKSPYFFN 388
            L+SPYFFN
Sbjct: 995  LESPYFFN 1002


>ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like [Solanum
            lycopersicum]
          Length = 993

 Score = 1370 bits (3546), Expect = 0.0
 Identities = 665/847 (78%), Positives = 753/847 (88%), Gaps = 2/847 (0%)
 Frame = -2

Query: 2922 MGQGKYQFLRRRQVKIETEAWEQAANEYKDLLKDMCEQKLAPNLPYIKSLFLGWFEPLCN 2743
            MG GKY  LRRRQ+K+ETEAWE AA EY++LL DMCEQKLAPNLPYIKSLFLGWFEPL +
Sbjct: 153  MGIGKYNLLRRRQIKVETEAWEDAAKEYQELLMDMCEQKLAPNLPYIKSLFLGWFEPLKD 212

Query: 2742 AITAEQELCRQGKNRAAYARYFDLLPADMMSVITMHKLMGLVMIGGEHGSARVVQAACML 2563
            AI AEQ+LC +GKNR AYA +FD LPA+MM+VITMHKLMGL+M GG  GSARVVQAA  +
Sbjct: 213  AIAAEQKLCDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGSGSARVVQAASHI 272

Query: 2562 GEAIEQEVRIHKFLEXXXXXKVDR--DKNAGDRSEIVIQEQDKLRKKVTNLIKKQKLQAV 2389
            GEAIE E RIH+FLE      +D   ++ AGD    +++E+++LRKKV  L+KKQKLQ V
Sbjct: 273  GEAIEHEARIHRFLEKTKKNALDGSLEETAGD----IMKERERLRKKVKILMKKQKLQQV 328

Query: 2388 RQIVKGHDDLKPWGPEVRAKVGSRLIELLLQTAYIQPPADQLADGPPDIRPAFVHTSKTM 2209
            R+IVK  DD KPWG +   KVG RLI++L++TAYIQPP DQL D PPDIRPAF+HT KT+
Sbjct: 329  RKIVKQQDDEKPWGQDNLVKVGCRLIQILIETAYIQPPNDQLEDCPPDIRPAFMHTLKTV 388

Query: 2208 VKETKKISRRYGIIQCDPLVLKGLEKTARHMVIPYIPMLVPPVKWTGYDKGAHLFLPSYV 2029
              +T K SRRYG+IQCDPLV KGL+KTARHMVIPY+PMLVPP  W+GYD+GA+LFLPSY+
Sbjct: 389  --DTVKGSRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQNWSGYDRGAYLFLPSYI 446

Query: 2028 MRTHGSRQQREAVKRAPKKQLEPIFEALDTLGNTKWRVNKRVLSVVDRIWAGGGRLADLV 1849
            MRTHG++QQREAVKR PKKQLEP+F+ALDTLGNTKWRVNKRVL ++DRIWA GGRLADLV
Sbjct: 447  MRTHGAKQQREAVKRVPKKQLEPVFQALDTLGNTKWRVNKRVLGILDRIWASGGRLADLV 506

Query: 1848 DRKDIPLPERPDTEDEEQLXXXXXXXXXXXKENGEKHSQRCDIELKLAVARKMKDEDGFF 1669
            DR+D+PLPE PDTE+EE++           KEN E+HSQRCDIELKLAVARKMKDE+GF+
Sbjct: 507  DREDVPLPEEPDTENEEEIKKWKWKVKAAKKENCERHSQRCDIELKLAVARKMKDEEGFY 566

Query: 1668 YPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFADGRPLGESGLRWLKIHLANLYAGGVDK 1489
            YPHNLDFRGRAYPMHP+LNHLGSDLCRGILEF++GRPLG+SGLRWLKIHLAN+Y GGVDK
Sbjct: 567  YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFSEGRPLGKSGLRWLKIHLANVYGGGVDK 626

Query: 1488 LSHDGRIAFTENHLDDIFDSSDKPLEGRRWWLKAEDPLQCLAVCINLSEALRSSSPETFY 1309
            LS +GR AF+ENH++DIFDS+D+PLEGRRWWL AEDP QCLA CI++SEALRS SPET  
Sbjct: 627  LSCEGRAAFSENHVEDIFDSADRPLEGRRWWLGAEDPFQCLATCISISEALRSPSPETSI 686

Query: 1308 SHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMRQDAQKD 1129
            SH+P+HQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIM++DA KD
Sbjct: 687  SHMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDADKD 746

Query: 1128 PAIYPDALRARILINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGTAIEDAELYG 949
            PA  P+ +RAR+LINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERG   +D EL+ 
Sbjct: 747  PATDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIEDDNELFA 806

Query: 948  ASCYAAKTTLTALGEMFEAARSIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGR 769
            A+CYAAKTTLTALGEMFEAARSIMSWLGDCAK+IA ENQPVRWTTPLGLPVVQPYRKLGR
Sbjct: 807  AACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENQPVRWTTPLGLPVVQPYRKLGR 866

Query: 768  HLIKTSLQVLTLQRETEKIMVKRQRTAFPPNFVHSLDGSHMMMTAVACNKAGLNFAGVHD 589
            HLIKTSLQ+LTLQRET+K+MVKRQRTAFPPNFVHSLDGSHMMMTA+AC +AGL+FAGVHD
Sbjct: 867  HLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKEAGLSFAGVHD 926

Query: 588  SYWTHACDVDEMSRILREKFVELYEAPILENLLESFQQSFPTLTFPPLPERGDFDLREVL 409
            SYWTHA DVD+M++ILREKFVELY+APILENLLESFQQSFP L FPPLPERGDFDLREVL
Sbjct: 927  SYWTHASDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVL 986

Query: 408  KSPYFFN 388
            +SPYFFN
Sbjct: 987  ESPYFFN 993


>emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]
          Length = 1002

 Score = 1369 bits (3543), Expect = 0.0
 Identities = 662/848 (78%), Positives = 752/848 (88%), Gaps = 3/848 (0%)
 Frame = -2

Query: 2922 MGQGKYQFLRRRQVKIETEAWEQAANEYKDLLKDMCEQKLAPNLPYIKSLFLGWFEPLCN 2743
            MG GKY FLRRRQ+K+ETEAWE+AA EY++LL DMCEQKLAPNLPY+KSLFLGWFEPL +
Sbjct: 161  MGVGKYNFLRRRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRD 220

Query: 2742 AITAEQELCRQGKNRAAYARYFDLLPADMMSVITMHKLMGLVMIGGEHGSARVVQAACML 2563
            AI AEQ+LC +GKNR AYA +FD LPA+MM+VITMHKLMGL+M GG  GSARVVQAA  +
Sbjct: 221  AIAAEQKLCDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASYI 280

Query: 2562 GEAIEQEVRIHKFLEXXXXXKV---DRDKNAGDRSEIVIQEQDKLRKKVTNLIKKQKLQA 2392
            GEAIE E RIH+FLE          D ++  GD    +++E+++LRKKV  L+KKQKL+ 
Sbjct: 281  GEAIEHEARIHRFLEKTKKSNALSGDLEETPGD----MMKERERLRKKVKILMKKQKLRQ 336

Query: 2391 VRQIVKGHDDLKPWGPEVRAKVGSRLIELLLQTAYIQPPADQLADGPPDIRPAFVHTSKT 2212
            VR+IVK  DD KPWG +   KVG RLI++L++TAYIQPP DQL DGPPDIRPAFVHT KT
Sbjct: 337  VRKIVKQQDDEKPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDGPPDIRPAFVHTLKT 396

Query: 2211 MVKETKKISRRYGIIQCDPLVLKGLEKTARHMVIPYIPMLVPPVKWTGYDKGAHLFLPSY 2032
            +  ET K SRRYG+IQCDPLV KGL+KTARHMVIPY+PMLVPP  W GYDKG +LFLPSY
Sbjct: 397  V--ETMKGSRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSY 454

Query: 2031 VMRTHGSRQQREAVKRAPKKQLEPIFEALDTLGNTKWRVNKRVLSVVDRIWAGGGRLADL 1852
            +MRTHG++QQREAVKR PKKQLEP+F+ALDTLGNTKWRVN++VL +V+RIWA GGRLADL
Sbjct: 455  IMRTHGAKQQREAVKRVPKKQLEPVFQALDTLGNTKWRVNRKVLGIVNRIWASGGRLADL 514

Query: 1851 VDRKDIPLPERPDTEDEEQLXXXXXXXXXXXKENGEKHSQRCDIELKLAVARKMKDEDGF 1672
            VDR+D+PLPE PDTEDE ++           KEN E+HSQRCDIELKLAVARKMKDEDGF
Sbjct: 515  VDREDVPLPEAPDTEDEAEIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGF 574

Query: 1671 FYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFADGRPLGESGLRWLKIHLANLYAGGVD 1492
            +YPHNLDFRGRAYPMHP+LNHLGSDLCRGILEFA+GRPLG SGLRWLKIHLAN+Y GGVD
Sbjct: 575  YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVD 634

Query: 1491 KLSHDGRIAFTENHLDDIFDSSDKPLEGRRWWLKAEDPLQCLAVCINLSEALRSSSPETF 1312
            KLS++GR+AF+ENHL+DIFDS+++PLEG+RWWL AEDP QCLA CIN++EALRS SPET 
Sbjct: 635  KLSYEGRVAFSENHLEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETA 694

Query: 1311 YSHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMRQDAQK 1132
             S++P+HQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIM++DA K
Sbjct: 695  ISYMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAK 754

Query: 1131 DPAIYPDALRARILINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGTAIEDAELY 952
            DPA  P+ +RAR+LINQVDRKLVKQTVMTSVYGVTYIGARDQIK+RLKERG   +D EL+
Sbjct: 755  DPANDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNELF 814

Query: 951  GASCYAAKTTLTALGEMFEAARSIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLG 772
             A+CYAAKTTLTALGEMFEAARSIMSWLGDCAK+IA EN PVRWTTPLGLPVVQPYRKLG
Sbjct: 815  AAACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLG 874

Query: 771  RHLIKTSLQVLTLQRETEKIMVKRQRTAFPPNFVHSLDGSHMMMTAVACNKAGLNFAGVH 592
            RHLIKTSLQ+LTLQRET+K+MVKRQRTAFPPNFVHSLDGSHMMMTA+AC ++GL+FAGVH
Sbjct: 875  RHLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVH 934

Query: 591  DSYWTHACDVDEMSRILREKFVELYEAPILENLLESFQQSFPTLTFPPLPERGDFDLREV 412
            DSYWTHACDVD+M++ILREKFVELY+APILENLLESFQQSFP L FPPLPERGDFDLREV
Sbjct: 935  DSYWTHACDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREV 994

Query: 411  LKSPYFFN 388
            L+SPYFFN
Sbjct: 995  LESPYFFN 1002