BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00012884
         (997 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   467   e-129
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V...   461   e-127
gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]       460   e-127
ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [...   459   e-126
emb|CBI26821.3| unnamed protein product [Vitis vinifera]              450   e-124
ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   450   e-124
ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   447   e-123
ref|XP_004498237.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   443   e-122
ref|XP_004498236.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   443   e-122
gb|EXB32317.1| RNA-dependent RNA polymerase 1 [Morus notabilis]       434   e-119
ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   434   e-119
gb|AAT38687.2| RNA-directed RNA polymerase, putative [Solanum de...   431   e-118
ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Th...   430   e-118
gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus...   429   e-118
gb|ABO93004.1| putative RNA-dependent RNA-polymerase [Solanum tu...   429   e-118
gb|AAT38751.2| RNA-directed RNA polymerase, putative [Solanum de...   429   e-117
ref|XP_002315849.2| hypothetical protein POPTR_0010s11560g [Popu...   428   e-117
ref|NP_001267682.1| RNA-dependent RNA polymerase 1-like [Cucumis...   428   e-117
gb|AAT38754.2| RNA-directed RNA polymerase, putative [Solanum de...   428   e-117
ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   427   e-117

>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
          Length = 1132

 Score =  467 bits (1202), Expect = e-129
 Identities = 233/335 (69%), Positives = 279/335 (83%), Gaps = 6/335 (1%)
 Frame = +1

Query: 10   IGQSSALCLELPQGRELPDFGESFADFEAKDGKFSLESGSTFSKNLDLVPIIGPPQGVVL 189
            IGQS+ LC+ELP   ELPDF E+FA ++  + +F LE+GS +S++LDLVPI+GPP G+ L
Sbjct: 221  IGQSTGLCMELPYRLELPDFKENFAYYKESEDRFVLETGSAYSRSLDLVPIVGPPDGIAL 280

Query: 190  PYEILFKVSCLVQYGCLSGPTLDVSFFRLVDP--AKIDIACIEYALEKLYHLKNCCYDPV 363
            PYEILFK++ LVQ GC++GP LD +F+RLVDP  A + I+CIE+AL+KLYHLK CCY+P 
Sbjct: 281  PYEILFKINLLVQNGCVAGPLLDSNFYRLVDPYRAPVSISCIEHALDKLYHLKECCYEPS 340

Query: 364  KWLNDQYRKYLTSDQPLKAPAISLDAGLVYVRRVQITPTKVYFSGPEINVSNRVLRNYLD 543
            +WL DQYRKY+TS     +PAISLD GLVYV RVQ+TP++VYF GPEINVSNRVLR++  
Sbjct: 341  RWLTDQYRKYMTSRSKPSSPAISLDDGLVYVHRVQVTPSRVYFCGPEINVSNRVLRHFRR 400

Query: 544  HIDNFIRISFIDEDLEKLHSTDLSPRTASADGDKRTGIFRRILSILRNGIVIGSKKFEFL 723
             IDNF+RISFIDEDL+K+HSTDLSPR +SA    RT I+ RILS LRNGI+IG +KFEFL
Sbjct: 401  DIDNFLRISFIDEDLDKIHSTDLSPRGSSATDITRTRIYTRILSTLRNGILIGDRKFEFL 460

Query: 724  AFSSSQLRENSAWMFASSLGLNASVIREWMGNFRQIRNVAKYAARLGQSFGSSKETLSVR 903
            AFSSSQLRE+SAWMFAS  GL A+ IREWMGNFR+IRNVAKYAARLGQSF SSKETLSV 
Sbjct: 461  AFSSSQLRESSAWMFASRYGLTAAEIREWMGNFREIRNVAKYAARLGQSFSSSKETLSVH 520

Query: 904  RDEIEIIPDV--EVG--TYVFSDGIGKISAEFAQR 996
             DEIEIIPDV  E+G   YVFSDGIGK+SAEFA++
Sbjct: 521  MDEIEIIPDVKIEIGKTKYVFSDGIGKVSAEFARK 555


>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
          Length = 1121

 Score =  461 bits (1186), Expect = e-127
 Identities = 235/334 (70%), Positives = 279/334 (83%), Gaps = 5/334 (1%)
 Frame = +1

Query: 10   IGQSSALCLELPQGRELPDFGESFADFEAKDGKFSLESGSTFSKNLDLVPIIGPPQGVVL 189
            IGQS ALCLELP G +LP+F E+FA ++  DGKF LESGS++S NL LVPI+GPPQG  L
Sbjct: 211  IGQSFALCLELPYGSQLPNFRENFAYYKENDGKFILESGSSYSHNLHLVPILGPPQGSSL 270

Query: 190  PYEILFKVSCLVQYGCLSGPTLDVSFFRLVDPAKIDIACIEYALEKLYHLKNCCYDPVKW 369
            P++ILFK++ LVQ GCLSGPTLD SFFRLVDP +  I+ IE+ALEKLYHLK CCY+PV+W
Sbjct: 271  PFQILFKINTLVQNGCLSGPTLDTSFFRLVDPERFPISFIEHALEKLYHLKECCYEPVRW 330

Query: 370  LNDQYRKYLTSDQPLK-APAISLDAGLVYVRRVQITPTKVYFSGPEINVSNRVLRNYLDH 546
            L++QYR Y+   +P+  +PAISLD GLVYVRRVQITP KVYF GPE+NVSNRVLRNY + 
Sbjct: 331  LSEQYRTYV--KKPVAGSPAISLDTGLVYVRRVQITPCKVYFCGPEVNVSNRVLRNYPED 388

Query: 547  IDNFIRISFIDEDLEKLHSTDLSPRTASADGDKRTGIFRRILSILRNGIVIGSKKFEFLA 726
            IDNF+R+SF+DE+LEK+HST +SPR  S +G +RTG++RRILSIL+NGIVIG KKF+FLA
Sbjct: 389  IDNFLRVSFLDENLEKIHSTVISPR-MSKEG-RRTGVYRRILSILQNGIVIGDKKFDFLA 446

Query: 727  FSSSQLRENSAWMFASSLGLNASVIREWMGNFRQIRNVAKYAARLGQSFGSSKETLSVRR 906
            FSSSQLR+NSAWMFAS  GL A+ IR WMG+F QIRNVAKYAARLGQSF SSKETL V +
Sbjct: 447  FSSSQLRDNSAWMFASRPGLTAAEIRSWMGDFSQIRNVAKYAARLGQSFSSSKETLKVAK 506

Query: 907  DEIEIIPDVEV----GTYVFSDGIGKISAEFAQR 996
            DEIE IPD+E+     TYVFSDGIGKIS + A R
Sbjct: 507  DEIENIPDIEIHKGRTTYVFSDGIGKISPQLAHR 540


>gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]
          Length = 1133

 Score =  460 bits (1184), Expect = e-127
 Identities = 226/337 (67%), Positives = 280/337 (83%), Gaps = 5/337 (1%)
 Frame = +1

Query: 1    SYCIGQSSALCLELPQGRELPDFGESFADFEAKDGKFSLESGSTFSKNLDLVPIIGPPQG 180
            S CIG SSAL LELP G +LPD  E+F  ++  + +F LESGS+FS+NLDLVPI+GPP G
Sbjct: 216  SCCIGHSSALYLELPYGVDLPDLRENFVYYKESEERFILESGSSFSRNLDLVPIVGPPSG 275

Query: 181  VVLPYEILFKVSCLVQYGCLSGPTLDVSFFRLVDPAKI-DIACIEYALEKLYHLKNCCYD 357
            + LP+E +FK++ L+Q GCLSGPTLDV F+RLVDP +I ++ CI YALEKL++LK C Y+
Sbjct: 276  INLPFETVFKINMLLQNGCLSGPTLDVDFYRLVDPQRIRNVDCINYALEKLFNLKECPYE 335

Query: 358  PVKWLNDQYRKYLTSDQPLKAPAISLDAGLVYVRRVQITPTKVYFSGPEINVSNRVLRNY 537
            P  WLN+QYRKYLT+ +P K PAI+LD+GLVYVRRVQ+TP+KVYF GPEINVSNRVLR Y
Sbjct: 336  PAAWLNEQYRKYLTAPRPPKPPAIALDSGLVYVRRVQVTPSKVYFCGPEINVSNRVLREY 395

Query: 538  LDHIDNFIRISFIDEDLEKLHSTDLSPRTASADGDKRTGIFRRILSILRNGIVIGSKKFE 717
            +D+ID F+R+SF+DE+LEKL STDLSPRT++A+ D+RTGI+RRILS+LRNGI IG +KFE
Sbjct: 396  IDYIDYFLRVSFVDEELEKLFSTDLSPRTSNANEDRRTGIYRRILSVLRNGIEIGDRKFE 455

Query: 718  FLAFSSSQLRENSAWMFASSLGLNASVIREWMGNFRQIRNVAKYAARLGQSFGSSKETLS 897
            FLAFSSSQLR+NS WMFA+  G +A  IR+W+G+FR IRNVAKYAARLGQSFGSS ETL+
Sbjct: 456  FLAFSSSQLRDNSLWMFAAVDGHSADTIRQWIGDFRSIRNVAKYAARLGQSFGSSTETLT 515

Query: 898  VRRDEIEIIPDVEVG----TYVFSDGIGKISAEFAQR 996
            V   E E+I D+E+      YVFSDGIGKIS+ FA+R
Sbjct: 516  VDESETEVISDIEIERGAVKYVFSDGIGKISSTFAKR 552


>ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [Populus trichocarpa]
            gi|222851356|gb|EEE88903.1| RNA-directed RNA Polymerase
            family protein [Populus trichocarpa]
          Length = 1133

 Score =  459 bits (1180), Expect = e-126
 Identities = 228/333 (68%), Positives = 273/333 (81%), Gaps = 4/333 (1%)
 Frame = +1

Query: 10   IGQSSALCLELPQGRELPDFGESFADFEAKDGKFSLESGSTFSKNLDLVPIIGPPQGVVL 189
            IG SS+LCLELP   +LP+F E+F  ++  +G F LESG TFS+N DLVPI+GP  GV L
Sbjct: 219  IGHSSSLCLELPNHLQLPNFNENFFYYKENEGTFVLESGLTFSRNPDLVPIVGPSSGVNL 278

Query: 190  PYEILFKVSCLVQYGCLSGPTLDVSFFRLVDPAKIDIACIEYALEKLYHLKNCCYDPVKW 369
            PY ILF+V+ LVQ GCL+G  LD  F+RLVDP ++ + CIEYALEKLYHLK CCY+P KW
Sbjct: 279  PYNILFRVNLLVQNGCLAGSMLDDIFYRLVDPNRMPVRCIEYALEKLYHLKECCYEPSKW 338

Query: 370  LNDQYRKYLTSDQPLKAPAISLDAGLVYVRRVQITPTKVYFSGPEINVSNRVLRNYLDHI 549
             N+QY+KYLTS  P ++P +SLDAGLVYV +VQITP KV+F GPE+NVSNRVLR Y + I
Sbjct: 339  FNEQYKKYLTSGNPPRSPVLSLDAGLVYVYKVQITPCKVFFCGPEVNVSNRVLRQYREDI 398

Query: 550  DNFIRISFIDEDLEKLHSTDLSPRTASADGDKRTGIFRRILSILRNGIVIGSKKFEFLAF 729
            DNF+R+SF+DE+LEK+HSTD+SPRT+S +  +RT I+ RILS L+NGIVIG KKFEFLAF
Sbjct: 399  DNFLRVSFVDEELEKIHSTDVSPRTSSRNELRRTAIYNRILSTLQNGIVIGDKKFEFLAF 458

Query: 730  SSSQLRENSAWMFASSLGLNASVIREWMGNFRQIRNVAKYAARLGQSFGSSKETLSVRRD 909
            SSSQLRENS WMFAS LGL A+ IR WMG+F +IRNVA+YAARLGQSFGSS ETLSV   
Sbjct: 459  SSSQLRENSCWMFASRLGLTAADIRAWMGSFHKIRNVARYAARLGQSFGSSTETLSVSSH 518

Query: 910  EIEIIPDVEV---GT-YVFSDGIGKISAEFAQR 996
            EIEIIPD+EV   GT Y+FSDGIGKISAEFA++
Sbjct: 519  EIEIIPDIEVSRGGTRYLFSDGIGKISAEFARK 551


>emb|CBI26821.3| unnamed protein product [Vitis vinifera]
          Length = 943

 Score =  450 bits (1158), Expect = e-124
 Identities = 231/336 (68%), Positives = 276/336 (82%), Gaps = 4/336 (1%)
 Frame = +1

Query: 1    SYCIGQSSALCLELPQGRELPDFGESFADFEAKDGKFSLESGSTFSKNLDLVPIIGPPQG 180
            S  IGQSSALCLELP G +LP+F E+FA ++  D KF LESG++FS NL LVPI+GPPQG
Sbjct: 173  SCSIGQSSALCLELPHGSQLPNFCENFARYKENDRKFILESGASFSGNLHLVPIVGPPQG 232

Query: 181  VVLPYEILFKVSCLVQYGCLSGPTLDVSFFRLVDPAKIDIACIEYALEKLYHLKNCCYDP 360
              LP++ILFK++ LVQ GCLSGPTLD +FFR VDP +I+I+ IE+ALEKLY+L+ CCY+P
Sbjct: 233  SNLPFKILFKINTLVQNGCLSGPTLDTNFFRWVDPQRINISFIEHALEKLYYLEECCYEP 292

Query: 361  VKWLNDQYRKYLTSDQPLKAPAISLDAGLVYVRRVQITPTKVYFSGPEINVSNRVLRNYL 540
            V+WL++QYR Y+ S Q   +PAISLD GLVYVRRVQITP KVYF GPE+NVSNRVLRNY 
Sbjct: 293  VRWLHEQYRTYI-SKQVAGSPAISLDTGLVYVRRVQITPCKVYFCGPEVNVSNRVLRNYP 351

Query: 541  DHIDNFIRISFIDEDLEKLHSTDLSPRTASADGDKRTGIFRRILSILRNGIVIGSKKFEF 720
            + IDNF+R+SF+DE+ EK+HST +SPR ++    +RTG++RRILSIL+NGIVIG KKF+F
Sbjct: 352  EDIDNFLRVSFLDENSEKIHSTVISPRMSNE--GRRTGVYRRILSILQNGIVIGDKKFDF 409

Query: 721  LAFSSSQLRENSAWMFASSLGLNASVIREWMGNFRQIRNVAKYAARLGQSFGSSKETLSV 900
            LA SSSQLR+NSAWMFAS  GL A+ IR  MG+F QIRNVAKYAARLGQSF SSKETL V
Sbjct: 410  LAVSSSQLRDNSAWMFASRPGLTAADIRSRMGDFSQIRNVAKYAARLGQSFSSSKETLKV 469

Query: 901  RRDEIEIIPDVEV----GTYVFSDGIGKISAEFAQR 996
             + EIEIIPD+E      TYVFSDGIGKISAE A R
Sbjct: 470  AKHEIEIIPDIETHRDGTTYVFSDGIGKISAELAHR 505


>ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Vitis vinifera]
          Length = 1109

 Score =  450 bits (1158), Expect = e-124
 Identities = 231/336 (68%), Positives = 276/336 (82%), Gaps = 4/336 (1%)
 Frame = +1

Query: 1    SYCIGQSSALCLELPQGRELPDFGESFADFEAKDGKFSLESGSTFSKNLDLVPIIGPPQG 180
            S  IGQSSALCLELP G +LP+F E+FA ++  D KF LESG++FS NL LVPI+GPPQG
Sbjct: 206  SCSIGQSSALCLELPHGSQLPNFCENFARYKENDRKFILESGASFSGNLHLVPIVGPPQG 265

Query: 181  VVLPYEILFKVSCLVQYGCLSGPTLDVSFFRLVDPAKIDIACIEYALEKLYHLKNCCYDP 360
              LP++ILFK++ LVQ GCLSGPTLD +FFR VDP +I+I+ IE+ALEKLY+L+ CCY+P
Sbjct: 266  SNLPFKILFKINTLVQNGCLSGPTLDTNFFRWVDPQRINISFIEHALEKLYYLEECCYEP 325

Query: 361  VKWLNDQYRKYLTSDQPLKAPAISLDAGLVYVRRVQITPTKVYFSGPEINVSNRVLRNYL 540
            V+WL++QYR Y+ S Q   +PAISLD GLVYVRRVQITP KVYF GPE+NVSNRVLRNY 
Sbjct: 326  VRWLHEQYRTYI-SKQVAGSPAISLDTGLVYVRRVQITPCKVYFCGPEVNVSNRVLRNYP 384

Query: 541  DHIDNFIRISFIDEDLEKLHSTDLSPRTASADGDKRTGIFRRILSILRNGIVIGSKKFEF 720
            + IDNF+R+SF+DE+ EK+HST +SPR ++    +RTG++RRILSIL+NGIVIG KKF+F
Sbjct: 385  EDIDNFLRVSFLDENSEKIHSTVISPRMSNE--GRRTGVYRRILSILQNGIVIGDKKFDF 442

Query: 721  LAFSSSQLRENSAWMFASSLGLNASVIREWMGNFRQIRNVAKYAARLGQSFGSSKETLSV 900
            LA SSSQLR+NSAWMFAS  GL A+ IR  MG+F QIRNVAKYAARLGQSF SSKETL V
Sbjct: 443  LAVSSSQLRDNSAWMFASRPGLTAADIRSRMGDFSQIRNVAKYAARLGQSFSSSKETLKV 502

Query: 901  RRDEIEIIPDVEV----GTYVFSDGIGKISAEFAQR 996
             + EIEIIPD+E      TYVFSDGIGKISAE A R
Sbjct: 503  AKHEIEIIPDIETHRDGTTYVFSDGIGKISAELAHR 538


>ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Fragaria vesca subsp.
            vesca]
          Length = 1119

 Score =  447 bits (1149), Expect = e-123
 Identities = 223/334 (66%), Positives = 274/334 (82%), Gaps = 4/334 (1%)
 Frame = +1

Query: 7    CIGQSSALCLELPQGRELPDFGESFADFEAKDGKFSLESGSTFSKNLDLVPIIGPPQGVV 186
            CIGQSS+LCL L    ELPDF E+FA ++  DG+F LE+GSTFS+N DLVPI+G P G+ 
Sbjct: 213  CIGQSSSLCLVLTSDGELPDFEENFAYYKKTDGQFILENGSTFSRNRDLVPIVGSPAGID 272

Query: 187  LPYEILFKVSCLVQYGCLSGPTLDVSFFRLVDPAKIDIACIEYALEKLYHLKNCCYDPVK 366
            LPY+ILFK++ LVQ GCLSGPTLD +F+RLVDP +I   CIE+AL+KL +LK  CY+P  
Sbjct: 273  LPYDILFKINLLVQQGCLSGPTLDNNFYRLVDPRRISRPCIEFALDKLSNLKESCYEPAV 332

Query: 367  WLNDQYRKYLTSDQPLKAPAISLDAGLVYVRRVQITPTKVYFSGPEINVSNRVLRNYLDH 546
            WLN++YRKY+ S +P K   ISLD+GLVYVRRVQITP+KVYFSGPE+NVSNR+LR Y   
Sbjct: 333  WLNEEYRKYMMSKKPPKPALISLDSGLVYVRRVQITPSKVYFSGPEVNVSNRILRQYSSD 392

Query: 547  IDNFIRISFIDEDLEKLHSTDLSPRTASADGDKRTGIFRRILSILRNGIVIGSKKFEFLA 726
            IDNF+R+SF+DE++EKL+STDLSPRT++    ++T I+ R+LS+LR+GIV+G KKFEFLA
Sbjct: 393  IDNFLRVSFVDEEMEKLYSTDLSPRTST----RKTRIYNRVLSVLRDGIVVGKKKFEFLA 448

Query: 727  FSSSQLRENSAWMFASSLGLNASVIREWMGNFRQIRNVAKYAARLGQSFGSSKETLSVRR 906
            FSSSQLRENS WMFA +   +A  IR  MG+FRQIRNVAKYAARLGQSFGSS ETLSV R
Sbjct: 449  FSSSQLRENSLWMFAPTDEDSADTIRAGMGDFRQIRNVAKYAARLGQSFGSSTETLSVGR 508

Query: 907  DEIEIIPDVEVGT----YVFSDGIGKISAEFAQR 996
            +E+E+IPDV V +    YVFSDGIGKISA+FA+R
Sbjct: 509  NEMEVIPDVTVNSCGIKYVFSDGIGKISADFAER 542


>ref|XP_004498237.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X2 [Cicer
            arietinum]
          Length = 1100

 Score =  443 bits (1140), Expect = e-122
 Identities = 222/335 (66%), Positives = 273/335 (81%), Gaps = 5/335 (1%)
 Frame = +1

Query: 7    CIGQSSALCLELPQGRELPDFGESFADFEAKDGKFSLESGSTFSKNLDLVPIIGPPQGVV 186
            CIGQSSA+CLELP  R+ P+  E F  ++  +G+++LESGS FS NLD+VPI+ PPQG+ 
Sbjct: 225  CIGQSSAICLELPCDRDFPNIREYFVHYQENEGQYTLESGSPFSHNLDVVPIVAPPQGIY 284

Query: 187  LPYEILFKVSCLVQYGCLSGPTLDVSFFRLVDPAKIDIACIEYALEKLYHLKNCCYDPVK 366
            +P++ILFKV+ LVQ+GCLSG  LD +F+ LVDP +I++  IE+ALEK+Y+ K+ CY+P +
Sbjct: 285  IPFDILFKVNSLVQHGCLSGSELDNAFYCLVDPLRINVDFIEHALEKMYYSKDFCYEPAR 344

Query: 367  WLNDQYRKYLTSDQPLKAPAISLDAGLVYVRRVQITPTKVYFSGPEINVSNRVLRNYLDH 546
            WL DQYR YL S+ PL++P+ISLD GLVYVRRVQITP KVYF GPEINVSNRV+R++ +H
Sbjct: 345  WLKDQYRMYLNSNYPLQSPSISLDNGLVYVRRVQITPCKVYFCGPEINVSNRVVRHFHEH 404

Query: 547  IDNFIRISFIDEDLEKLHSTDLSPRTASADGDKRTGIFRRILSILRNGIVIGSKKFEFLA 726
            IDNF+R+SF+DE+L+KL+STDLS R +      RT ++ RILSILRNGIVIG KKFEFLA
Sbjct: 405  IDNFLRVSFVDEELDKLYSTDLSSRISVG---VRTEVYNRILSILRNGIVIGDKKFEFLA 461

Query: 727  FSSSQLRENSAWMFA-SSLGLNASVIREWMGNFRQIRNVAKYAARLGQSFGSSKETLSVR 903
            FSSSQLRENS WMFA ++ GL A  IR WMG+F QIRNVAKYAARLGQSFGSS ETLSV 
Sbjct: 462  FSSSQLRENSLWMFAPTATGLTAQFIRAWMGDFSQIRNVAKYAARLGQSFGSSTETLSVN 521

Query: 904  RDEIEIIPDVEVG----TYVFSDGIGKISAEFAQR 996
            R+EIEIIPD +V      YVFSDGIGKIS EFA+R
Sbjct: 522  RNEIEIIPDAQVKHDTIEYVFSDGIGKISLEFARR 556


>ref|XP_004498236.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Cicer
            arietinum]
          Length = 1126

 Score =  443 bits (1140), Expect = e-122
 Identities = 222/335 (66%), Positives = 273/335 (81%), Gaps = 5/335 (1%)
 Frame = +1

Query: 7    CIGQSSALCLELPQGRELPDFGESFADFEAKDGKFSLESGSTFSKNLDLVPIIGPPQGVV 186
            CIGQSSA+CLELP  R+ P+  E F  ++  +G+++LESGS FS NLD+VPI+ PPQG+ 
Sbjct: 225  CIGQSSAICLELPCDRDFPNIREYFVHYQENEGQYTLESGSPFSHNLDVVPIVAPPQGIY 284

Query: 187  LPYEILFKVSCLVQYGCLSGPTLDVSFFRLVDPAKIDIACIEYALEKLYHLKNCCYDPVK 366
            +P++ILFKV+ LVQ+GCLSG  LD +F+ LVDP +I++  IE+ALEK+Y+ K+ CY+P +
Sbjct: 285  IPFDILFKVNSLVQHGCLSGSELDNAFYCLVDPLRINVDFIEHALEKMYYSKDFCYEPAR 344

Query: 367  WLNDQYRKYLTSDQPLKAPAISLDAGLVYVRRVQITPTKVYFSGPEINVSNRVLRNYLDH 546
            WL DQYR YL S+ PL++P+ISLD GLVYVRRVQITP KVYF GPEINVSNRV+R++ +H
Sbjct: 345  WLKDQYRMYLNSNYPLQSPSISLDNGLVYVRRVQITPCKVYFCGPEINVSNRVVRHFHEH 404

Query: 547  IDNFIRISFIDEDLEKLHSTDLSPRTASADGDKRTGIFRRILSILRNGIVIGSKKFEFLA 726
            IDNF+R+SF+DE+L+KL+STDLS R +      RT ++ RILSILRNGIVIG KKFEFLA
Sbjct: 405  IDNFLRVSFVDEELDKLYSTDLSSRISVG---VRTEVYNRILSILRNGIVIGDKKFEFLA 461

Query: 727  FSSSQLRENSAWMFA-SSLGLNASVIREWMGNFRQIRNVAKYAARLGQSFGSSKETLSVR 903
            FSSSQLRENS WMFA ++ GL A  IR WMG+F QIRNVAKYAARLGQSFGSS ETLSV 
Sbjct: 462  FSSSQLRENSLWMFAPTATGLTAQFIRAWMGDFSQIRNVAKYAARLGQSFGSSTETLSVN 521

Query: 904  RDEIEIIPDVEVG----TYVFSDGIGKISAEFAQR 996
            R+EIEIIPD +V      YVFSDGIGKIS EFA+R
Sbjct: 522  RNEIEIIPDAQVKHDTIEYVFSDGIGKISLEFARR 556


>gb|EXB32317.1| RNA-dependent RNA polymerase 1 [Morus notabilis]
          Length = 862

 Score =  434 bits (1116), Expect = e-119
 Identities = 213/335 (63%), Positives = 265/335 (79%), Gaps = 4/335 (1%)
 Frame = +1

Query: 1    SYCIGQSSALCLELPQGRELPDFGESFADFEAKDGKFSLESGSTFSKNLDLVPIIGPPQG 180
            S CIGQSSALCLE+P  R+LP+  + F  ++  +G+FSL+ G  FS + DLVP++ PP+G
Sbjct: 197  SCCIGQSSALCLEIPNWRQLPNLRDVFVYYKEDEGQFSLQQGCPFSSSSDLVPMVVPPKG 256

Query: 181  VVLPYEILFKVSCLVQYGCLSGPTLDVSFFRLVDPAKIDIACIEYALEKLYHLKNCCYDP 360
            ++LPY+ILFKV+ LVQ+GCL    LD++FFRLVDP++I + CIE AL+KLYHLK+CCYDP
Sbjct: 257  IILPYKILFKVNSLVQHGCLPAEVLDLNFFRLVDPSRIPLECIESALDKLYHLKDCCYDP 316

Query: 361  VKWLNDQYRKYLTSDQPLKAPAISLDAGLVYVRRVQITPTKVYFSGPEINVSNRVLRNYL 540
            ++WL  QY KY TS Q  K P I+L+ GLVYV RVQ+TPTKVYF GPEIN+SNRVLRNY 
Sbjct: 317  LRWLKKQYIKYNTSGQIPKMPTIALEDGLVYVHRVQVTPTKVYFCGPEINLSNRVLRNYP 376

Query: 541  DHIDNFIRISFIDEDLEKLHSTDLSPRTASADGDKRTGIFRRILSILRNGIVIGSKKFEF 720
              IDNF+R+SF+DE+L+KL STDL  R +SA+G +RT ++ RIL  LRNGI+IG KKFEF
Sbjct: 377  KDIDNFLRVSFVDENLDKLSSTDLCARGSSANGKRRTRLYDRILFTLRNGILIGDKKFEF 436

Query: 721  LAFSSSQLRENSAWMFASSLGLNASVIREWMGNFRQIRNVAKYAARLGQSFGSSKETLSV 900
            LAFSSSQL+E S WMFAS  GL A+ IR WMG+F  I+NVA+YAARLGQSFGSS ET  V
Sbjct: 437  LAFSSSQLKEGSLWMFASRDGLTAADIRNWMGDFHDIKNVARYAARLGQSFGSSHETFRV 496

Query: 901  RRDEIEIIPDVEV----GTYVFSDGIGKISAEFAQ 993
             RDE+E+IPD+EV      Y FSDGIGKIS +FA+
Sbjct: 497  GRDEVELIPDIEVKRDGKNYCFSDGIGKISEDFAK 531


>ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Glycine
            max] gi|571439308|ref|XP_006574822.1| PREDICTED:
            RNA-dependent RNA polymerase 1-like isoform X2 [Glycine
            max] gi|571439310|ref|XP_006574823.1| PREDICTED:
            RNA-dependent RNA polymerase 1-like isoform X3 [Glycine
            max]
          Length = 1125

 Score =  434 bits (1116), Expect = e-119
 Identities = 220/335 (65%), Positives = 268/335 (80%), Gaps = 6/335 (1%)
 Frame = +1

Query: 10   IGQSSALCLELPQGRELPDFGESFADFEAKDGKFSLESGSTFSKNLDLVPIIGPPQGVVL 189
            IGQSSA+CLELP GR+LP+F E+FA +E  + +++L++G  FS+N  LVPI+ PP GV +
Sbjct: 222  IGQSSAICLELPNGRQLPNFRENFAYYEESERQYTLQTGVPFSQNWGLVPIVAPPLGVKI 281

Query: 190  PYEILFKVSCLVQYGCLSGPTLDVSFFRLVDPAKIDIACIEYALEKLYHLKNCCYDPVKW 369
             Y+ILFKV+ LVQ+ CL+GP LD  F+RLVDP ++    IEYALEK+Y+ K  CY+P KW
Sbjct: 282  SYDILFKVNSLVQHACLAGPALDGDFYRLVDPRRMPREFIEYALEKIYYSKEFCYEPTKW 341

Query: 370  LNDQYRKYLTSDQPLKAPAISLDAGLVYVRRVQITPTKVYFSGPEINVSNRVLRNYLDHI 549
            L DQY+ YL S    ++PAISLD GLVYVRRVQITP KVYF GPE+NVSNRVLR++ +HI
Sbjct: 342  LTDQYKTYLESKNHPRSPAISLDTGLVYVRRVQITPCKVYFCGPEMNVSNRVLRHFREHI 401

Query: 550  DNFIRISFIDEDLEKLHSTDLSPRTASADGDKRTGIFRRILSILRNGIVIGSKKFEFLAF 729
            DNF+R+SF+DE+L+KL STDLS R+     +K+T I+ RILSIL+NGIV+G KKFEFLAF
Sbjct: 402  DNFLRVSFVDEELDKLFSTDLSSRSQ----NKKTEIYTRILSILKNGIVVGDKKFEFLAF 457

Query: 730  SSSQLRENSAWMFA-SSLGLNASVIREWMGNFRQIRNVAKYAARLGQSFGSSKETLSVRR 906
            SSSQLRENS WMFA +  G  A+ IR+WMGNF QIRNVAKYAARLGQSFGSS ETLSV R
Sbjct: 458  SSSQLRENSLWMFAPTETGCTAAYIRKWMGNFSQIRNVAKYAARLGQSFGSSTETLSVHR 517

Query: 907  DEIEIIPDVEVGT-----YVFSDGIGKISAEFAQR 996
            DE+EIIPDV+  T     YVFSDGIGKIS EFAQ+
Sbjct: 518  DEVEIIPDVKKLTYDGNEYVFSDGIGKISLEFAQK 552


>gb|AAT38687.2| RNA-directed RNA polymerase, putative [Solanum demissum]
          Length = 1139

 Score =  431 bits (1108), Expect = e-118
 Identities = 218/333 (65%), Positives = 267/333 (80%), Gaps = 4/333 (1%)
 Frame = +1

Query: 10   IGQSSALCLELPQGRELPDFGESFADFEAKDGKFSLESGSTF--SKNLDLVPIIGPPQGV 183
            IG SS+LCL+  +G  LP+F ESF  +  ++   +L++G TF  S+   LVP + PP+G+
Sbjct: 199  IGLSSSLCLQFRRGVHLPNFQESFFHYTERENNITLQTGFTFFVSQKSALVPNVQPPEGI 258

Query: 184  VLPYEILFKVSCLVQYGCLSGPTLDVSFFRLVDPAKIDIACIEYALEKLYHLKNCCYDPV 363
             +PY+ILFK+S LVQ+GC+ GP LDV FFRLVDP + ++ACIE ALEKLY+LK CCYDPV
Sbjct: 259  AIPYKILFKISSLVQHGCIPGPALDVYFFRLVDPQRRNVACIEQALEKLYYLKECCYDPV 318

Query: 364  KWLNDQYRKYLTSDQPLKAPAISLDAGLVYVRRVQITPTKVYFSGPEINVSNRVLRNYLD 543
            +WL +QY  YL   QP K+P+I+LD GLVYVRRV +TP KVYF GPE+NVSNRVLRNY +
Sbjct: 319  RWLTEQYDGYLKGRQPPKSPSITLDDGLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSE 378

Query: 544  HIDNFIRISFIDEDLEKLHSTDLSPRTASADGDKRTGIFRRILSILRNGIVIGSKKFEFL 723
             IDNF+R+SF+DE+ EKL+STDL P+ ++ +G  RT I+ RILS LR G VIG KKFEFL
Sbjct: 379  DIDNFLRVSFVDEEWEKLYSTDLLPKASTGNG-IRTNIYERILSTLRKGFVIGDKKFEFL 437

Query: 724  AFSSSQLRENSAWMFASSLGLNASVIREWMGNFRQIRNVAKYAARLGQSFGSSKETLSVR 903
            AFSSSQLR+NS WMFAS  GL A+ IR WMG+F QI+NVAKYAARLGQSFGSSKETLSV 
Sbjct: 438  AFSSSQLRDNSVWMFASRPGLTANDIRTWMGDFSQIKNVAKYAARLGQSFGSSKETLSVL 497

Query: 904  RDEIEIIPDVEV-GT-YVFSDGIGKISAEFAQR 996
            R EIE+IPDV+V GT YVFSDGIGKISA+FA+R
Sbjct: 498  RHEIEVIPDVKVHGTSYVFSDGIGKISADFARR 530


>ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
            gi|590697846|ref|XP_007045553.1| RNA-dependent RNA
            polymerase 1 isoform 1 [Theobroma cacao]
            gi|590697850|ref|XP_007045554.1| RNA-dependent RNA
            polymerase 1 isoform 1 [Theobroma cacao]
            gi|508709487|gb|EOY01384.1| RNA-dependent RNA polymerase
            1 isoform 1 [Theobroma cacao] gi|508709488|gb|EOY01385.1|
            RNA-dependent RNA polymerase 1 isoform 1 [Theobroma
            cacao] gi|508709489|gb|EOY01386.1| RNA-dependent RNA
            polymerase 1 isoform 1 [Theobroma cacao]
          Length = 1109

 Score =  430 bits (1105), Expect = e-118
 Identities = 219/336 (65%), Positives = 269/336 (80%), Gaps = 4/336 (1%)
 Frame = +1

Query: 1    SYCIGQSSALCLELPQGRELPDFGESFADFEAKDGKFSLESGSTFSKNLDLVPIIGPPQG 180
            S CIGQSS LCLELP   +LP+F E+FA ++  +GKF LESGS++S+NL+LVPI+GP  G
Sbjct: 215  SSCIGQSSVLCLELPYYLQLPNFRENFAYYKESEGKFVLESGSSYSRNLNLVPIVGPSLG 274

Query: 181  VVLPYEILFKVSCLVQYGCLSGPTLDVSFFRLVDPAKIDIACIEYALEKLYHLKNCCYDP 360
            + LPYEILFK++ LVQ GC+ GP LD +F+RLV+P +ID   I++ALEKLY+LK CC++P
Sbjct: 275  IDLPYEILFKINLLVQNGCIPGPALDANFYRLVNPCRIDKVYIDHALEKLYYLKECCFEP 334

Query: 361  VKWLNDQYRKYLTSDQPLKAPAISLDAGLVYVRRVQITPTKVYFSGPEINVSNRVLRNYL 540
             KWL +QY+ Y+ S +   +P ISLD GLV VRRVQITP++VYF GPEINVSNRVLR++ 
Sbjct: 335  SKWLLEQYKGYIASKKNPGSPVISLDDGLVNVRRVQITPSRVYFCGPEINVSNRVLRHFH 394

Query: 541  DHIDNFIRISFIDEDLEKLHSTDLSPRTASADGDKRTGIFRRILSILRNGIVIGSKKFEF 720
            D IDNF+RI+F+DE+LEK+HSTDL  R      ++ T I+ RILS L+NGIVIG K+FEF
Sbjct: 395  DDIDNFLRITFVDEELEKIHSTDLLTR------NRITEIYGRILSTLKNGIVIGDKQFEF 448

Query: 721  LAFSSSQLRENSAWMFASSLGLNASVIREWMGNFRQIRNVAKYAARLGQSFGSSKETLSV 900
            LAFSSSQLRENSAWMFAS  GL A+ IR WMG F +IRNVAKYAARLGQSF SS ETLSV
Sbjct: 449  LAFSSSQLRENSAWMFASREGLTAADIRTWMGEFSKIRNVAKYAARLGQSFSSSTETLSV 508

Query: 901  RRDEIEIIPDVEVG----TYVFSDGIGKISAEFAQR 996
             +DEIEII DVE+      YVFSDGIGKISA+FA++
Sbjct: 509  AKDEIEIIDDVEIKRDGINYVFSDGIGKISAKFAKK 544


>gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus guttatus]
          Length = 1110

 Score =  429 bits (1103), Expect = e-118
 Identities = 213/330 (64%), Positives = 263/330 (79%), Gaps = 1/330 (0%)
 Frame = +1

Query: 10   IGQSSALCLELPQGRELPDFGESFADFEAKDGKFSLESGSTFSKNLDLVPIIGPPQGVVL 189
            IGQSS+LCL+LP G  LP+F ++F  ++  +  F LE+G  FS N DLVPI+ PP  + L
Sbjct: 209  IGQSSSLCLQLPYGMRLPNFRDNFLYYKESETPFRLETGVPFSHNSDLVPIVRPPIDIKL 268

Query: 190  PYEILFKVSCLVQYGCLSGPTLDVSFFRLVDPAKIDIACIEYALEKLYHLKNCCYDPVKW 369
            PY +LFKV  LVQ GCL GP LD SFF LV+PAK DI  IE+ALEKLY+LK CCY+P  W
Sbjct: 269  PYTLLFKVCSLVQTGCLPGPKLDRSFFDLVNPAKHDIRYIEHALEKLYYLKECCYNPAAW 328

Query: 370  LNDQYRKYLTSDQPLKAPAISLDAGLVYVRRVQITPTKVYFSGPEINVSNRVLRNYLDHI 549
            L +QY +Y TS +  K+PAI LD GLVYV RVQ+TPT+VYFSGPE+NVSNRVLR+Y D+I
Sbjct: 329  LKEQYERYRTSKEHPKSPAICLDDGLVYVHRVQVTPTRVYFSGPEVNVSNRVLRHYRDYI 388

Query: 550  DNFIRISFIDEDLEKLHSTDLSPRTASADGDKRTGIFRRILSILRNGIVIGSKKFEFLAF 729
            DNF+R+SF+DE+ +K++STDLSPR A+ D +KRT ++ R++SILR+G+ IG +KF+FLAF
Sbjct: 389  DNFLRVSFVDEEWDKMYSTDLSPRVAAGDENKRTKLYERVISILRDGVRIGDRKFDFLAF 448

Query: 730  SSSQLRENSAWMFASSLGLNASVIREWMGNFRQIRNVAKYAARLGQSFGSSKETLSVRRD 909
            SSSQLR+NS WMFA + GLNA  IREWMG+F  IRNVAKYAARLGQSFGSS ETLSV + 
Sbjct: 449  SSSQLRDNSLWMFAPTDGLNADGIREWMGDFSSIRNVAKYAARLGQSFGSSTETLSVSKR 508

Query: 910  EIEIIPDVEVGT-YVFSDGIGKISAEFAQR 996
            EIE I DV+ GT Y FSDGIGKIS +FA++
Sbjct: 509  EIEEIQDVKNGTEYTFSDGIGKISEDFARQ 538


>gb|ABO93004.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 841

 Score =  429 bits (1103), Expect = e-118
 Identities = 217/333 (65%), Positives = 267/333 (80%), Gaps = 4/333 (1%)
 Frame = +1

Query: 10   IGQSSALCLELPQGRELPDFGESFADFEAKDGKFSLESGSTF--SKNLDLVPIIGPPQGV 183
            IG SS+LCL+  +G  LP+F ESF  +  ++   +L++G TF  S+   LVP + PP+G+
Sbjct: 207  IGLSSSLCLQFRRGVHLPNFQESFFHYTERENNITLQTGFTFFVSQKSALVPNVQPPEGI 266

Query: 184  VLPYEILFKVSCLVQYGCLSGPTLDVSFFRLVDPAKIDIACIEYALEKLYHLKNCCYDPV 363
             +PY+ILFK+S LVQ+GC+ GP L+V FFRLVDP + ++ACIE ALEKLY+LK CCYDPV
Sbjct: 267  AIPYKILFKISSLVQHGCIPGPALNVYFFRLVDPQRRNVACIEQALEKLYYLKECCYDPV 326

Query: 364  KWLNDQYRKYLTSDQPLKAPAISLDAGLVYVRRVQITPTKVYFSGPEINVSNRVLRNYLD 543
            +WL +QY  YL   QP K+P+I+LD GLVYVRRV +TP KVYF GPE+NVSNRVLRNY +
Sbjct: 327  RWLTEQYDGYLKGRQPPKSPSITLDDGLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSE 386

Query: 544  HIDNFIRISFIDEDLEKLHSTDLSPRTASADGDKRTGIFRRILSILRNGIVIGSKKFEFL 723
             IDNF+R+SF+DE+ EKL+STDL P+ ++ +G  RT I+ RILS LR G VIG KKFEFL
Sbjct: 387  DIDNFLRVSFVDEEWEKLYSTDLLPKASTGNG-IRTNIYERILSTLRKGFVIGDKKFEFL 445

Query: 724  AFSSSQLRENSAWMFASSLGLNASVIREWMGNFRQIRNVAKYAARLGQSFGSSKETLSVR 903
            AFSSSQLR+NS WMFAS  GL A+ IR WMG+F QI+NVAKYAARLGQSFGSSKETLSV 
Sbjct: 446  AFSSSQLRDNSVWMFASRPGLTANDIRTWMGDFSQIKNVAKYAARLGQSFGSSKETLSVL 505

Query: 904  RDEIEIIPDVEV-GT-YVFSDGIGKISAEFAQR 996
            R EIE+IPDV+V GT YVFSDGIGKISA+FA+R
Sbjct: 506  RHEIEVIPDVKVHGTSYVFSDGIGKISADFARR 538


>gb|AAT38751.2| RNA-directed RNA polymerase, putative [Solanum demissum]
          Length = 1180

 Score =  429 bits (1102), Expect = e-117
 Identities = 217/333 (65%), Positives = 266/333 (79%), Gaps = 4/333 (1%)
 Frame = +1

Query: 10   IGQSSALCLELPQGRELPDFGESFADFEAKDGKFSLESGSTF--SKNLDLVPIIGPPQGV 183
            IG SS+LCL+  +G  LP+F E F  +  ++   +L++G TF  S+   LVP + PP+G+
Sbjct: 173  IGLSSSLCLQFRRGVHLPNFQEIFFHYTERENNITLQTGFTFFVSQKSALVPNVQPPEGI 232

Query: 184  VLPYEILFKVSCLVQYGCLSGPTLDVSFFRLVDPAKIDIACIEYALEKLYHLKNCCYDPV 363
             +PY+ILFK+S LVQ+GC+ GP LDV FFRLVDP + ++ACIE ALEKLY+LK CCYDPV
Sbjct: 233  AIPYKILFKISSLVQHGCIPGPALDVYFFRLVDPQRRNVACIEQALEKLYYLKECCYDPV 292

Query: 364  KWLNDQYRKYLTSDQPLKAPAISLDAGLVYVRRVQITPTKVYFSGPEINVSNRVLRNYLD 543
            +WL +QY  YL   QP K+P+I+LD GLVYVRRV +TP KVYF GPE+NVSNRVLRNY +
Sbjct: 293  RWLTEQYDGYLKGRQPPKSPSITLDDGLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSE 352

Query: 544  HIDNFIRISFIDEDLEKLHSTDLSPRTASADGDKRTGIFRRILSILRNGIVIGSKKFEFL 723
             IDNF+R+SF+DE+ EKL+STDL P+ ++ +G  RT I+ RILS LR G VIG KKFEFL
Sbjct: 353  DIDNFLRVSFVDEEWEKLYSTDLLPKASTGNG-IRTNIYERILSTLRKGFVIGDKKFEFL 411

Query: 724  AFSSSQLRENSAWMFASSLGLNASVIREWMGNFRQIRNVAKYAARLGQSFGSSKETLSVR 903
            AFSSSQLR+NS WMFAS  GL A+ IR WMG+F QI+NVAKYAARLGQSFGSSKETLSV 
Sbjct: 412  AFSSSQLRDNSVWMFASRPGLTANDIRTWMGDFSQIKNVAKYAARLGQSFGSSKETLSVL 471

Query: 904  RDEIEIIPDVEV-GT-YVFSDGIGKISAEFAQR 996
            R EIE+IPDV+V GT YVFSDGIGKISA+FA+R
Sbjct: 472  RHEIEVIPDVKVHGTSYVFSDGIGKISADFARR 504


>ref|XP_002315849.2| hypothetical protein POPTR_0010s11560g [Populus trichocarpa]
            gi|550329580|gb|EEF02020.2| hypothetical protein
            POPTR_0010s11560g [Populus trichocarpa]
          Length = 1119

 Score =  428 bits (1101), Expect = e-117
 Identities = 214/336 (63%), Positives = 266/336 (79%), Gaps = 6/336 (1%)
 Frame = +1

Query: 1    SYCIGQSSALCLELPQGRELPDFGESFADFEAKDGKFSLESGSTFSKNLDLVPIIGPPQG 180
            SYCIGQSSALCLELP   +LP+F E+F  ++  +G F LE GSTF    DLVPI+   QG
Sbjct: 211  SYCIGQSSALCLELPPNSQLPNFQENFVCYKEDEGHFILEKGSTFCCKSDLVPILSAAQG 270

Query: 181  VVLPYEILFKVSCLVQYGCLSGPTLDVSFFRLVDPAKIDIA--CIEYALEKLYHLKNCCY 354
              LPY+I+FKV+ LVQ+GCL GP LD  FFRL++P+KI IA   I++ALEKL HLK CCY
Sbjct: 271  SELPYDIVFKVNSLVQHGCLPGPALDARFFRLINPSKIRIAHAYIQHALEKLSHLKECCY 330

Query: 355  DPVKWLNDQYRKYLTSDQPLKAPAISLDAGLVYVRRVQITPTKVYFSGPEINVSNRVLRN 534
            DP +WL +QY+KYLT+ +    PAI++D GLV++RRVQITPTK+YF GP++N+SNRVLR 
Sbjct: 331  DPARWLREQYQKYLTTGRLPTPPAIAVDDGLVFLRRVQITPTKLYFCGPDVNLSNRVLRK 390

Query: 535  YLDHIDNFIRISFIDEDLEKLHSTDLSPRTASADGDKRTGIFRRILSILRNGIVIGSKKF 714
            Y   IDNF+R+SF+DEDL+KL S ++SPRT SA   ++T I++RILS+ RNGI IGSKKF
Sbjct: 391  YPGDIDNFLRVSFVDEDLDKLFSANISPRTFSAIEGRQTNIYQRILSVQRNGITIGSKKF 450

Query: 715  EFLAFSSSQLRENSAWMFASSLGLNASVIREWMGNFRQIRNVAKYAARLGQSFGSSKETL 894
            EFL FS SQ+RE+S WMFAS  GL A+ IREWMG+FR+I+NVAKYAARLGQSF SS+E+ 
Sbjct: 451  EFLGFSQSQVRESSLWMFASRPGLTAADIREWMGDFREIKNVAKYAARLGQSFSSSRESF 510

Query: 895  SVRRDEIEIIPDVEVGT----YVFSDGIGKISAEFA 990
            ++ R EIEIIPD+EV +    YVFSDGIGKISAE A
Sbjct: 511  NIDRHEIEIIPDIEVKSGGVNYVFSDGIGKISAELA 546


>ref|NP_001267682.1| RNA-dependent RNA polymerase 1-like [Cucumis sativus]
            gi|316989901|gb|ADU77016.1| RNA-dependent RNA polymerase
            1b [Cucumis sativus]
          Length = 1115

 Score =  428 bits (1100), Expect = e-117
 Identities = 207/337 (61%), Positives = 269/337 (79%), Gaps = 5/337 (1%)
 Frame = +1

Query: 1    SYCIGQSSALCLELPQGRELPDFGESFADFEAKDGKFSLESGSTFSKNLDLVPIIGPPQG 180
            S  IGQS+ALCLE+P GR+LP+F + FA F+   GKF+L SGST+S N++LVP++ PP+ 
Sbjct: 215  SCSIGQSAALCLEIPYGRQLPNFHDKFAYFKEIKGKFTLVSGSTYSSNVNLVPVVTPPRT 274

Query: 181  VVLPYEILFKVSCLVQYGCLSGPTLDVSFFRLVDPAKIDIACIEYALEKLYHLKNCCYDP 360
            + LPY ILFK++ LVQ GCL GP LD+SF+++VD    + A I++AL+KL HLK CCY+P
Sbjct: 275  INLPYTILFKINLLVQQGCLPGPALDISFYQMVDSQIYNTAVIDHALKKLLHLKECCYNP 334

Query: 361  VKWLNDQYRKYLTSDQPLKAPAISLDAGLVYVRRVQITPTKVYFSGPEINVSNRVLRNYL 540
             KWL+++YRKY     P + P ++L+ GLVYV RVQ+TP KVYF GPE+N+SNRVLR Y 
Sbjct: 335  SKWLDEEYRKYFKLKNPPQPPILTLNEGLVYVHRVQVTPCKVYFCGPEVNISNRVLRRYP 394

Query: 541  DHIDNFIRISFIDEDLEKLHSTDLSPRTASADGDKRTGIFRRILSILRNGIVIGSKKFEF 720
            D+IDNF+R+SF+DE+L K++ST+LSPR +S+  D +T IF+RILS+LR+GI IG KKFEF
Sbjct: 395  DYIDNFLRVSFVDEELGKMYSTELSPRASSSLEDGKTKIFKRILSVLRDGITIGDKKFEF 454

Query: 721  LAFSSSQLRENSAWMFASSLGLNASVIREWMGNFRQIRNVAKYAARLGQSFGSSKETLSV 900
            LA+SSSQLREN+AWMFA    L A+ IR+WMG+F  IRNVAKYAARLGQSFGSS ETLSV
Sbjct: 455  LAYSSSQLRENAAWMFAPKNELTAAKIRQWMGDFHNIRNVAKYAARLGQSFGSSTETLSV 514

Query: 901  RRDEIEIIPDVEVGT-----YVFSDGIGKISAEFAQR 996
             R E+++IPD+EV +     YVFSDGIGKI+A FA++
Sbjct: 515  SRREVKVIPDIEVESGSGVNYVFSDGIGKIAASFARK 551


>gb|AAT38754.2| RNA-directed RNA polymerase, putative [Solanum demissum]
          Length = 1021

 Score =  428 bits (1100), Expect = e-117
 Identities = 216/333 (64%), Positives = 268/333 (80%), Gaps = 4/333 (1%)
 Frame = +1

Query: 10   IGQSSALCLELPQGRELPDFGESFADFEAKDGKFSLESGSTF--SKNLDLVPIIGPPQGV 183
            IG SS+LCL+  +G  LP+F ESF  +  ++   +L++G TF  S+   LVP + PP+G+
Sbjct: 55   IGLSSSLCLQFRRGVHLPNFQESFFHYAERENNITLQTGFTFFISQKSALVPNVQPPEGI 114

Query: 184  VLPYEILFKVSCLVQYGCLSGPTLDVSFFRLVDPAKIDIACIEYALEKLYHLKNCCYDPV 363
             +PY+ILFK+S LVQ+GC+ GP+L+V FFRLVDP + ++ACIE ALEKLY+LK CCYDPV
Sbjct: 115  AIPYKILFKISSLVQHGCIPGPSLNVYFFRLVDPQRRNVACIEQALEKLYYLKECCYDPV 174

Query: 364  KWLNDQYRKYLTSDQPLKAPAISLDAGLVYVRRVQITPTKVYFSGPEINVSNRVLRNYLD 543
            +WL +QY  YL   QP K+P+I+LD GLVYVRRV +TP KVYF GPE+NVSNRVLRNY +
Sbjct: 175  RWLTEQYDGYLKGRQPPKSPSITLDDGLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSE 234

Query: 544  HIDNFIRISFIDEDLEKLHSTDLSPRTASADGDKRTGIFRRILSILRNGIVIGSKKFEFL 723
             IDNF+R+SF+DE+ EKL+ST+L P+ ++ +G  RT I+ RILS LR G VIG KKFEFL
Sbjct: 235  DIDNFLRVSFVDEEWEKLYSTELLPKASTGNG-IRTNIYERILSTLRKGFVIGDKKFEFL 293

Query: 724  AFSSSQLRENSAWMFASSLGLNASVIREWMGNFRQIRNVAKYAARLGQSFGSSKETLSVR 903
            AFSSSQLR+NS WMFAS  GL A+ IR WMG+F QI+NVAKYAARLGQSFGSSKETLSV 
Sbjct: 294  AFSSSQLRDNSVWMFASRPGLTANDIRTWMGDFSQIKNVAKYAARLGQSFGSSKETLSVL 353

Query: 904  RDEIEIIPDVEV-GT-YVFSDGIGKISAEFAQR 996
            R EIE+IPDV+V GT YVFSDGIGKISA+FA+R
Sbjct: 354  RHEIEVIPDVKVHGTSYVFSDGIGKISADFARR 386


>ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Solanum tuberosum]
          Length = 1115

 Score =  427 bits (1097), Expect = e-117
 Identities = 217/333 (65%), Positives = 267/333 (80%), Gaps = 4/333 (1%)
 Frame = +1

Query: 10   IGQSSALCLELPQGRELPDFGESFADFEAKDGKFSLESGSTF--SKNLDLVPIIGPPQGV 183
            IG SS+LCL+  +G  LP+F ESF  +  ++   +L++G TF  S+   LVP + PP+G+
Sbjct: 207  IGLSSSLCLQFRRGVHLPNFQESFFHYAERENNITLQTGFTFFVSQKSALVPNVQPPEGI 266

Query: 184  VLPYEILFKVSCLVQYGCLSGPTLDVSFFRLVDPAKIDIACIEYALEKLYHLKNCCYDPV 363
             +PY+ILFK+S LVQ+GC+ GP L+V+FFRLVDP + ++ACIE ALEKLY+LK CCYDPV
Sbjct: 267  AIPYKILFKISSLVQHGCIPGPALNVNFFRLVDPQRRNVACIEQALEKLYYLKECCYDPV 326

Query: 364  KWLNDQYRKYLTSDQPLKAPAISLDAGLVYVRRVQITPTKVYFSGPEINVSNRVLRNYLD 543
            +WL +QY  YL   QP K+P+I+LD GLVYVRRV +TP KVYF GPE+NVSNRVLRNY +
Sbjct: 327  RWLTEQYDGYLKGRQPPKSPSINLDDGLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSE 386

Query: 544  HIDNFIRISFIDEDLEKLHSTDLSPRTASADGDKRTGIFRRILSILRNGIVIGSKKFEFL 723
             IDNF+R+SF+DE+ EKL+STDL P+ ++ +G  RT I+ RILS L+ G VIG KKFEFL
Sbjct: 387  DIDNFLRVSFVDEEWEKLYSTDLLPKASTGNG-IRTNIYVRILSTLQKGFVIGDKKFEFL 445

Query: 724  AFSSSQLRENSAWMFASSLGLNASVIREWMGNFRQIRNVAKYAARLGQSFGSSKETLSVR 903
            AFSSSQLR+NS WMFAS  GL A  IR WMG+F QI+NVAKYAARLGQSFGSSKETLSV 
Sbjct: 446  AFSSSQLRDNSVWMFASRPGLTAIDIRTWMGDFSQIKNVAKYAARLGQSFGSSKETLSVL 505

Query: 904  RDEIEIIPDVEV-GT-YVFSDGIGKISAEFAQR 996
            R EIEIIPDV+V GT YVFSDGIGKISA+FA+R
Sbjct: 506  RHEIEIIPDVKVHGTSYVFSDGIGKISADFARR 538