BLASTX nr result
ID: Paeonia23_contig00012678
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia23_contig00012678
(634 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFY98072.1| ORF1 [Ngewotan virus] 88 2e-15
gb|AGL80610.1| RNA-dependent RNA polymerase, partial [Plum bark ... 87 3e-15
emb|CCV01575.1| polymerase, partial [Negev-like virus #174] 87 3e-15
gb|AGL80617.1| RNA-dependent RNA polymerase, partial [Plum bark ... 86 7e-15
ref|YP_001552324.1| RNA-dependent RNA polymerase [Plum bark necr... 86 7e-15
ref|YP_004928118.1| polyprotein [Hibiscus green spot virus] gi|3... 86 1e-14
emb|CDM63857.1| polyprotein [Plum bark necrosis stem pitting-ass... 85 2e-14
gb|AFI24684.1| hypothetical protein 1 [Negev virus] 83 8e-14
gb|AFI24681.1| hypothetical protein 1 [Negev virus] 83 8e-14
gb|AFI24672.1| hypothetical protein 1 [Negev virus] 83 8e-14
gb|AAZ06770.1| RNA-dependent RNA polymerase [Grapevine leafroll-... 81 2e-13
gb|AAC40856.1| RNA-dependent RNA polymerase [grapevine leafroll-... 79 9e-13
gb|AFG26694.1| RNA-dependent RNA polymerase, partial [Grapevine ... 79 9e-13
gb|ACJ54664.1| RNA-dependent RNA polymerase [Grapevine leafroll-... 79 9e-13
ref|YP_337912.1| RNA-dependent RNA polymerase [Grapevine leafrol... 79 1e-12
gb|AFI24678.1| hypothetical protein 1 [Piura virus] 78 3e-12
ref|YP_008858531.1| RdRp, partial [Carnation yellow fleck virus]... 77 3e-12
ref|NP_835244.2| polyprotein [Grapevine rootstock stem lesion as... 77 6e-12
ref|NP_835337.1| replicase [Grapevine rootstock stem lesion asso... 77 6e-12
gb|AAN63467.1|AF314061_2 RNA-dependent RNA polymerase [grapevine... 77 6e-12
>gb|AFY98072.1| ORF1 [Ngewotan virus]
Length = 2282
Score = 87.8 bits (216), Expect = 2e-15
Identities = 67/207 (32%), Positives = 94/207 (45%), Gaps = 3/207 (1%)
Frame = -1
Query: 634 LEGDSSMYDKSQSLLAMLIEVVMFEELGCAVTVIEMLKNTFV-GGVTASSAGLAFIIALQ 458
LE D S YDKSQ LA+ E + + G ++E+ N V V + L+ +++ Q
Sbjct: 2039 LEIDISKYDKSQRELALEFECKLMKRFGVDDDLVELWFNAHVLSQVYDKTTKLSALVSYQ 2098
Query: 457 RKSGHGDTMLGNLAYNFTSIGHSVGYENMRGCIGKGDDNVVL--LLSQLFEGEHAAVVAK 284
RKSG T +GN + + + ++ + GDD+++ L Q +H
Sbjct: 2099 RKSGDASTFIGNTLFLMAVVCDLIPVSSLELALFSGDDSLLYGHSLGQFKNAQH------ 2152
Query: 283 KMGLYFNLETKMILHDVPAFSSGGFVPVGNRVVFFPDPLKLVELLGERQVDASRTIREQF 104
GL FNLE K + F S +PV R F PDPLK + LG + S + E
Sbjct: 2153 -FGLKFNLEIKFFEFEHSYFCSKFLLPVDGRWTFTPDPLKFMTKLGRHDLVNSLHVEEYR 2211
Query: 103 ISFQDRVSAYAEEGVPEAVHEWTRRRY 23
ISF D V Y E V AV R RY
Sbjct: 2212 ISFVDIVKNYREYSVCTAVALALRERY 2238
>gb|AGL80610.1| RNA-dependent RNA polymerase, partial [Plum bark necrosis stem
pitting-associated virus]
Length = 524
Score = 87.4 bits (215), Expect = 3e-15
Identities = 59/189 (31%), Positives = 88/189 (46%), Gaps = 1/189 (0%)
Frame = -1
Query: 631 EGDSSMYDKSQSLLAMLIEVVMFEELGCAVTVIEM-LKNTFVGGVTASSAGLAFIIALQR 455
E D S YDKSQ+ IE ++ LG +++ + F V ++S G + I QR
Sbjct: 272 EVDLSKYDKSQNDFTKGIEHEIYRRLGMDTELLDYWCASDFSSQVGSTSRGFSLSIGSQR 331
Query: 454 KSGHGDTMLGNLAYNFTSIGHSVGYENMRGCIGKGDDNVVLLLSQLFEGEHAAVVAKKMG 275
++G T LGN N + +G EN GDD++ LF +
Sbjct: 332 RTGTATTWLGNTVVNMALMARVLGCENFSSMAFSGDDSI------LFHHSPLDLDISNYE 385
Query: 274 LYFNLETKMILHDVPAFSSGGFVPVGNRVVFFPDPLKLVELLGERQVDASRTIREQFISF 95
L+F + K+ VP F S FV + + F PDP+KL LG + DA +RE+F+SF
Sbjct: 386 LHFAFDVKLFRMTVPYFCSKFFVVGSSGLNFVPDPVKLFVSLGSEKNDAESVMRERFVSF 445
Query: 94 QDRVSAYAE 68
D +Y +
Sbjct: 446 LDLTKSYED 454
>emb|CCV01575.1| polymerase, partial [Negev-like virus #174]
Length = 261
Score = 87.4 bits (215), Expect = 3e-15
Identities = 67/207 (32%), Positives = 92/207 (44%), Gaps = 3/207 (1%)
Frame = -1
Query: 634 LEGDSSMYDKSQSLLAMLIEVVMFEELGCAVTVIEMLKNTFV-GGVTASSAGLAFIIALQ 458
LE D S YDKSQ LA+ E + G A ++E+ N V V + L +++ Q
Sbjct: 18 LEIDISKYDKSQRELALEFECKLMLRFGVAPDIVELWFNAHVLTRVYDKTTKLKALVSYQ 77
Query: 457 RKSGHGDTMLGNLAYNFTSIGHSVGYENMRGCIGKGDDNVVL--LLSQLFEGEHAAVVAK 284
RKSG T +GN + + + + + GDD+++ LSQ +H
Sbjct: 78 RKSGDASTFIGNTLFLMAVVCDLIPVSQLELALFSGDDSLLYGHSLSQFKNAQH------ 131
Query: 283 KMGLYFNLETKMILHDVPAFSSGGFVPVGNRVVFFPDPLKLVELLGERQVDASRTIREQF 104
GL FNLE K D F S + V + F PDPLK + LG + S + E
Sbjct: 132 -FGLKFNLEIKFFEFDKSYFCSKFLLVVNDHWTFTPDPLKFITKLGRHDLVNSLHVEEYR 190
Query: 103 ISFQDRVSAYAEEGVPEAVHEWTRRRY 23
ISF D V Y V AV + R RY
Sbjct: 191 ISFVDTVKNYKNYAVCIAVADALRERY 217
>gb|AGL80617.1| RNA-dependent RNA polymerase, partial [Plum bark necrosis stem
pitting-associated virus] gi|500154691|gb|AGL80624.1|
RNA-dependent RNA polymerase, partial [Plum bark
necrosis stem pitting-associated virus]
Length = 525
Score = 86.3 bits (212), Expect = 7e-15
Identities = 59/189 (31%), Positives = 87/189 (46%), Gaps = 1/189 (0%)
Frame = -1
Query: 631 EGDSSMYDKSQSLLAMLIEVVMFEELGCAVTVIEMLK-NTFVGGVTASSAGLAFIIALQR 455
E D S YDKSQ+ IE ++ LG ++++ + F V ++S G + I QR
Sbjct: 272 EVDLSKYDKSQNDFTKGIEHEIYRRLGLDTELLDLWSASDFSSQVGSTSRGFSLSIGSQR 331
Query: 454 KSGHGDTMLGNLAYNFTSIGHSVGYENMRGCIGKGDDNVVLLLSQLFEGEHAAVVAKKMG 275
++G T LGN N + +G E GDD++ LF +
Sbjct: 332 RTGTATTWLGNTVVNMALMARVLGCEKFSSMAFSGDDSI------LFHHSPLDLDISNYE 385
Query: 274 LYFNLETKMILHDVPAFSSGGFVPVGNRVVFFPDPLKLVELLGERQVDASRTIREQFISF 95
L+F + K+ VP F S FV + + F PDP+KL LG + D +RE+FISF
Sbjct: 386 LHFAFDVKLFRMTVPYFCSKFFVVGSSGLQFVPDPVKLFVSLGSEKNDEESVMRERFISF 445
Query: 94 QDRVSAYAE 68
D AY +
Sbjct: 446 LDLTKAYED 454
>ref|YP_001552324.1| RNA-dependent RNA polymerase [Plum bark necrosis and stem
pitting-associated virus] gi|158828623|gb|ABW81235.1|
RNA-dependent RNA polymerase [Plum bark necrosis stem
pitting-associated virus]
Length = 524
Score = 86.3 bits (212), Expect = 7e-15
Identities = 59/189 (31%), Positives = 87/189 (46%), Gaps = 1/189 (0%)
Frame = -1
Query: 631 EGDSSMYDKSQSLLAMLIEVVMFEELGCAVTVIEM-LKNTFVGGVTASSAGLAFIIALQR 455
E D S YDKSQ+ IE ++ LG ++E + F V ++S G + I QR
Sbjct: 272 EVDLSKYDKSQNDFTKGIEHEIYRRLGMDTELLEYWCASDFSSQVGSTSRGFSLSIGSQR 331
Query: 454 KSGHGDTMLGNLAYNFTSIGHSVGYENMRGCIGKGDDNVVLLLSQLFEGEHAAVVAKKMG 275
++G T LGN N + +G EN GDD++ LF +
Sbjct: 332 RTGTATTWLGNTVVNMALMARVLGCENFSSMAFSGDDSI------LFHHSPLDLDISNYE 385
Query: 274 LYFNLETKMILHDVPAFSSGGFVPVGNRVVFFPDPLKLVELLGERQVDASRTIREQFISF 95
L+F + K+ VP F S FV + + F PDP+KL LG + D +RE+F+SF
Sbjct: 386 LHFAFDVKLFRMTVPYFCSKFFVVGSSGLNFVPDPVKLFVSLGSEKNDDESVMRERFVSF 445
Query: 94 QDRVSAYAE 68
D +Y +
Sbjct: 446 LDLTKSYED 454
>ref|YP_004928118.1| polyprotein [Hibiscus green spot virus] gi|353703574|gb|AER13445.1|
polyprotein [Hibiscus green spot virus]
Length = 2645
Score = 85.5 bits (210), Expect = 1e-14
Identities = 62/203 (30%), Positives = 96/203 (47%), Gaps = 5/203 (2%)
Frame = -1
Query: 634 LEGDSSMYDKSQSLLAMLIEVVMFEELGCAVTVIEMLKNTFV-GGVTASSAGLAFIIALQ 458
LE D S YDKSQ L+A+L E + G ++++ + + V L F + LQ
Sbjct: 2401 LEIDISKYDKSQGLIALLFECKIMRWFGVEEHLVQLWFDMHMCSRVDDRHTSLKFEVRLQ 2460
Query: 457 RKSGHGDTMLGNLAYNFTSIGHSVGYENMRGCIGKGDDNVVLLLSQLFEGEHAAVVAKKM 278
R+SG T+LGN + I + E M C GDD++++ + L + + A +
Sbjct: 2461 RRSGDAATLLGNTMFLMAVIAYHYKVEEMDLCAFAGDDSLLIGANHLLDTD-----ATEF 2515
Query: 277 GLYFNLETKMILHDVPAFSSGGFVPVGNRVVFFPDPLKLVELLGERQVDASRTIREQFIS 98
FNLE K ++ F S +PVG+R F PDP+KL+ L + I +S
Sbjct: 2516 TDLFNLEVKFFRYEYYHFCSKFLIPVGDRWYFVPDPVKLLVKLARCDLRNRVHIERYRVS 2575
Query: 97 FQDRVSAYAEEGV----PEAVHE 41
+ D V + + V +AVHE
Sbjct: 2576 YMDSVQFFCNDEVLLVLEKAVHE 2598
>emb|CDM63857.1| polyprotein [Plum bark necrosis stem pitting-associated virus]
Length = 2866
Score = 85.1 bits (209), Expect = 2e-14
Identities = 58/189 (30%), Positives = 87/189 (46%), Gaps = 1/189 (0%)
Frame = -1
Query: 631 EGDSSMYDKSQSLLAMLIEVVMFEELGCAVTVIEM-LKNTFVGGVTASSAGLAFIIALQR 455
E D S YDKSQ+ IE ++ LG ++E + F V ++S G + I QR
Sbjct: 2614 EVDLSKYDKSQNDFTKGIEHEIYRRLGMGTELLEYWCASDFSSQVGSTSRGCSLSIGSQR 2673
Query: 454 KSGHGDTMLGNLAYNFTSIGHSVGYENMRGCIGKGDDNVVLLLSQLFEGEHAAVVAKKMG 275
++G T LGN N + ++G EN GDD++ LF +
Sbjct: 2674 RTGTATTWLGNTVVNMALMARALGCENFSSMAFSGDDSI------LFHHSPLDLDISNYE 2727
Query: 274 LYFNLETKMILHDVPAFSSGGFVPVGNRVVFFPDPLKLVELLGERQVDASRTIREQFISF 95
+F + K+ VP F S FV + + F PD +KL LG + D +RE+F+SF
Sbjct: 2728 FHFAFDVKLFRMTVPYFCSKFFVVGSSGLNFVPDAVKLFVSLGSEKNDDESVMRERFVSF 2787
Query: 94 QDRVSAYAE 68
D +YA+
Sbjct: 2788 LDLTKSYAD 2796
>gb|AFI24684.1| hypothetical protein 1 [Negev virus]
Length = 2368
Score = 82.8 bits (203), Expect = 8e-14
Identities = 65/207 (31%), Positives = 90/207 (43%), Gaps = 3/207 (1%)
Frame = -1
Query: 634 LEGDSSMYDKSQSLLAMLIEVVMFEELGCAVTVIEMLKNTFV-GGVTASSAGLAFIIALQ 458
LE D S YDKSQ LA+ E + G A ++E+ N V V + L +++ Q
Sbjct: 2125 LEIDISKYDKSQRELALEFECKLMLRFGVAPDIVELWFNAHVLTRVYDKTTKLKALVSYQ 2184
Query: 457 RKSGHGDTMLGNLAYNFTSIGHSVGYENMRGCIGKGDDNVVL--LLSQLFEGEHAAVVAK 284
RKSG T +GN + + + + + GDD+++ LSQ +H
Sbjct: 2185 RKSGDASTFIGNTLFLMAVVCDLIPVSQLELALFSGDDSLLYGHSLSQFKNAQH------ 2238
Query: 283 KMGLYFNLETKMILHDVPAFSSGGFVPVGNRVVFFPDPLKLVELLGERQVDASRTIREQF 104
GL FNLE K D F S + V + F PDPLK + LG + + E
Sbjct: 2239 -FGLKFNLEIKFFEFDKSYFCSKFLLVVNDHWTFTPDPLKFITKLGRHDLVNPLHVEEYR 2297
Query: 103 ISFQDRVSAYAEEGVPEAVHEWTRRRY 23
ISF D V Y V AV + RY
Sbjct: 2298 ISFVDTVKNYKNYAVCVAVADALCERY 2324
>gb|AFI24681.1| hypothetical protein 1 [Negev virus]
Length = 2368
Score = 82.8 bits (203), Expect = 8e-14
Identities = 65/207 (31%), Positives = 90/207 (43%), Gaps = 3/207 (1%)
Frame = -1
Query: 634 LEGDSSMYDKSQSLLAMLIEVVMFEELGCAVTVIEMLKNTFV-GGVTASSAGLAFIIALQ 458
LE D S YDKSQ LA+ E + G A ++E+ N V V + L +++ Q
Sbjct: 2125 LEIDISKYDKSQRELALEFECKLMLRFGVAPDIVELWFNAHVLTRVYDKTTKLKALVSYQ 2184
Query: 457 RKSGHGDTMLGNLAYNFTSIGHSVGYENMRGCIGKGDDNVVL--LLSQLFEGEHAAVVAK 284
RKSG T +GN + + + + + GDD+++ LSQ +H
Sbjct: 2185 RKSGDASTFIGNTLFLMAVVCDLIPVSQLELALFSGDDSLLYGHSLSQFKNAQH------ 2238
Query: 283 KMGLYFNLETKMILHDVPAFSSGGFVPVGNRVVFFPDPLKLVELLGERQVDASRTIREQF 104
GL FNLE K D F S + V + F PDPLK + LG + + E
Sbjct: 2239 -FGLKFNLEIKFFEFDKSYFCSKFLLVVNDHWTFTPDPLKFITKLGRHDLVNPLHVEEYR 2297
Query: 103 ISFQDRVSAYAEEGVPEAVHEWTRRRY 23
ISF D V Y V AV + RY
Sbjct: 2298 ISFVDTVKNYKNYAVCVAVADALCERY 2324
>gb|AFI24672.1| hypothetical protein 1 [Negev virus]
Length = 2368
Score = 82.8 bits (203), Expect = 8e-14
Identities = 65/207 (31%), Positives = 90/207 (43%), Gaps = 3/207 (1%)
Frame = -1
Query: 634 LEGDSSMYDKSQSLLAMLIEVVMFEELGCAVTVIEMLKNTFV-GGVTASSAGLAFIIALQ 458
LE D S YDKSQ LA+ E + G A ++E+ N V V + L +++ Q
Sbjct: 2125 LEIDISKYDKSQRELALEFECKLMLRFGVAPDIVELWFNAHVLTRVYDKTTKLKALVSYQ 2184
Query: 457 RKSGHGDTMLGNLAYNFTSIGHSVGYENMRGCIGKGDDNVVL--LLSQLFEGEHAAVVAK 284
RKSG T +GN + + + + + GDD+++ LSQ +H
Sbjct: 2185 RKSGDASTFIGNTLFLMAVVCDLIPVSQLELALFSGDDSLLYGHSLSQFKNAQH------ 2238
Query: 283 KMGLYFNLETKMILHDVPAFSSGGFVPVGNRVVFFPDPLKLVELLGERQVDASRTIREQF 104
GL FNLE K D F S + V + F PDPLK + LG + + E
Sbjct: 2239 -FGLKFNLEIKFFEFDKSYFCSKFLLVVNDHWTFTPDPLKFITKLGRHDLVNPLHVEEYR 2297
Query: 103 ISFQDRVSAYAEEGVPEAVHEWTRRRY 23
ISF D V Y V AV + RY
Sbjct: 2298 ISFVDTVKNYKNYAVCVAVADALCERY 2324
>gb|AAZ06770.1| RNA-dependent RNA polymerase [Grapevine leafroll-associated virus
2]
Length = 459
Score = 81.3 bits (199), Expect = 2e-13
Identities = 68/210 (32%), Positives = 96/210 (45%), Gaps = 6/210 (2%)
Frame = -1
Query: 631 EGDSSMYDKSQSLLAMLIEVVMFEELGCAVTVIEMLKNTFVGGVTASSAG-----LAFII 467
E D S YDKSQ E VM++ELG V E L ++ G S A L+F I
Sbjct: 191 EVDFSKYDKSQDAFVKAFEEVMYKELG----VDEELLAIWMCGERLSIANTLDGQLSFTI 246
Query: 466 ALQRKSGHGDTMLGNLAYNFTSIGHSVGYENMRGCIGKGDDNVVLLLSQLFEGEHAAVVA 287
QRKSG +T +GN + N GDD+++ S++ +A +
Sbjct: 247 ENQRKSGASNTWIGNSLVTLGILSLYYDVRNFEALYVSGDDSLIFSRSEI--SNYADDIC 304
Query: 286 KKMGLYFNLETKMILHDVPAFSSGGFVPVGNRVVFFPDPLKLVELLGERQVDASRT-IRE 110
MG ETK + VP F S V G++ F PDP KL LG + DAS + E
Sbjct: 305 TDMGF----ETKFMSPSVPYFCSKFVVMCGHKTFFVPDPYKLFVKLGAVKEDASMDFLFE 360
Query: 109 QFISFQDRVSAYAEEGVPEAVHEWTRRRYK 20
F SF+D S + +E + + + E +Y+
Sbjct: 361 TFTSFKDLTSDFNDERLIQKLAELVALKYE 390
>gb|AAC40856.1| RNA-dependent RNA polymerase [grapevine leafroll-associated virus
2]
Length = 459
Score = 79.3 bits (194), Expect = 9e-13
Identities = 67/210 (31%), Positives = 95/210 (45%), Gaps = 6/210 (2%)
Frame = -1
Query: 631 EGDSSMYDKSQSLLAMLIEVVMFEELGCAVTVIEMLKNTFVGGVTASSAG-----LAFII 467
E D S YDKSQ E VM++ELG V E L ++ G S A L+F I
Sbjct: 191 EVDFSKYDKSQDAFVKAFEEVMYKELG----VDEELLAIWMCGERLSIANTLDGQLSFTI 246
Query: 466 ALQRKSGHGDTMLGNLAYNFTSIGHSVGYENMRGCIGKGDDNVVLLLSQLFEGEHAAVVA 287
QRKSG +T +GN + N GDD+++ S++ +A +
Sbjct: 247 ENQRKSGASNTWIGNSLVTLGILSLYYDVRNFEALYISGDDSLIFSRSEI--SNYADDIC 304
Query: 286 KKMGLYFNLETKMILHDVPAFSSGGFVPVGNRVVFFPDPLKLVELLGERQVDASRT-IRE 110
MG ETK + VP F S V G++ F PDP KL LG + D S + E
Sbjct: 305 TDMGF----ETKFMSPSVPYFCSKFVVMCGHKTFFVPDPYKLFVKLGAVKEDVSMDFLFE 360
Query: 109 QFISFQDRVSAYAEEGVPEAVHEWTRRRYK 20
F SF+D S + +E + + + E +Y+
Sbjct: 361 TFTSFKDLTSDFNDERLIQKLAELVALKYE 390
>gb|AFG26694.1| RNA-dependent RNA polymerase, partial [Grapevine
leafroll-associated virus 2]
Length = 459
Score = 79.3 bits (194), Expect = 9e-13
Identities = 67/210 (31%), Positives = 95/210 (45%), Gaps = 6/210 (2%)
Frame = -1
Query: 631 EGDSSMYDKSQSLLAMLIEVVMFEELGCAVTVIEMLKNTFVGGVTASSAG-----LAFII 467
E D S YDKSQ E VM++ELG V E L ++ G S A L+F I
Sbjct: 191 EVDFSKYDKSQDAFVKAFEEVMYKELG----VDEELLAIWMCGERLSIANTLDGQLSFTI 246
Query: 466 ALQRKSGHGDTMLGNLAYNFTSIGHSVGYENMRGCIGKGDDNVVLLLSQLFEGEHAAVVA 287
QRKSG +T +GN + N GDD+++ S++ +A +
Sbjct: 247 ENQRKSGASNTWIGNSLVTLGILSLYYDVRNFEALYISGDDSLIFSRSEI--SNYADDIC 304
Query: 286 KKMGLYFNLETKMILHDVPAFSSGGFVPVGNRVVFFPDPLKLVELLGERQVDASRT-IRE 110
MG ETK + VP F S V G++ F PDP KL LG + D S + E
Sbjct: 305 TDMGF----ETKFMSPSVPYFCSKFVVMCGHKTFFVPDPYKLFVKLGAVKEDVSMDFLFE 360
Query: 109 QFISFQDRVSAYAEEGVPEAVHEWTRRRYK 20
F SF+D S + +E + + + E +Y+
Sbjct: 361 TFTSFKDLTSDFNDERLIQKLAELVALKYE 390
>gb|ACJ54664.1| RNA-dependent RNA polymerase [Grapevine leafroll-associated virus
2] gi|410519399|gb|AFV73371.1| RNA-dependent RNA
polymerase, partial [Grapevine leafroll-associated virus
2]
Length = 459
Score = 79.3 bits (194), Expect = 9e-13
Identities = 67/210 (31%), Positives = 95/210 (45%), Gaps = 6/210 (2%)
Frame = -1
Query: 631 EGDSSMYDKSQSLLAMLIEVVMFEELGCAVTVIEMLKNTFVGGVTASSAG-----LAFII 467
E D S YDKSQ E VM++ELG V E L ++ G S A L+F I
Sbjct: 191 EVDFSKYDKSQDAFVKAFEEVMYKELG----VDEELLAIWMCGERLSIANTLDGQLSFTI 246
Query: 466 ALQRKSGHGDTMLGNLAYNFTSIGHSVGYENMRGCIGKGDDNVVLLLSQLFEGEHAAVVA 287
QRKSG +T +GN + N GDD+++ S++ +A +
Sbjct: 247 ENQRKSGASNTWIGNSLVTLGILSLYYDVRNFEALYISGDDSLIFSRSEI--SNYADDIC 304
Query: 286 KKMGLYFNLETKMILHDVPAFSSGGFVPVGNRVVFFPDPLKLVELLGERQVDASRT-IRE 110
MG ETK + VP F S V G++ F PDP KL LG + D S + E
Sbjct: 305 TDMGF----ETKFMSPSVPYFCSKFVVMCGHKTFFVPDPYKLFVKLGAVKEDVSMDFLFE 360
Query: 109 QFISFQDRVSAYAEEGVPEAVHEWTRRRYK 20
F SF+D S + +E + + + E +Y+
Sbjct: 361 TFTSFKDLTSDFNDERLIQKLAELVALKYE 390
>ref|YP_337912.1| RNA-dependent RNA polymerase [Grapevine leafroll-associated virus
2] gi|60651024|gb|AAX31604.1| RNA-dependent RNA
polymerase [Grapevine leafroll-associated virus 2]
Length = 459
Score = 79.0 bits (193), Expect = 1e-12
Identities = 67/210 (31%), Positives = 96/210 (45%), Gaps = 6/210 (2%)
Frame = -1
Query: 631 EGDSSMYDKSQSLLAMLIEVVMFEELGCAVTVIEMLKNTFVGGVTASSAG-----LAFII 467
E D S YDKSQ E VM++ELG V E L ++ G S A L+F I
Sbjct: 191 EVDFSKYDKSQDAFVKAFEEVMYKELG----VDEELLAIWMCGERLSIANTLDGQLSFTI 246
Query: 466 ALQRKSGHGDTMLGNLAYNFTSIGHSVGYENMRGCIGKGDDNVVLLLSQLFEGEHAAVVA 287
QRKSG +T +GN + N GDD+++ S++ +A +
Sbjct: 247 ENQRKSGASNTWIGNSLVTLGILSLYYDVRNFEALYISGDDSLIFSRSEI--SNYADDIC 304
Query: 286 KKMGLYFNLETKMILHDVPAFSSGGFVPVGNRVVFFPDPLKLVELLGERQVDASRT-IRE 110
MG ETK + VP F S V G++ F PDP KL LG + DAS + E
Sbjct: 305 TDMGF----ETKFMSPSVPYFCSKFVVMCGHKTFFVPDPYKLFVKLGAVKEDASMDFLFE 360
Query: 109 QFISFQDRVSAYAEEGVPEAVHEWTRRRYK 20
F SF+D + + +E + + + E +Y+
Sbjct: 361 VFTSFKDLTTDFNDERLIQKLAELVAVKYE 390
>gb|AFI24678.1| hypothetical protein 1 [Piura virus]
Length = 2336
Score = 77.8 bits (190), Expect = 3e-12
Identities = 62/212 (29%), Positives = 92/212 (43%), Gaps = 3/212 (1%)
Frame = -1
Query: 634 LEGDSSMYDKSQSLLAMLIEVVMFEELGCAVTVIEMLKNTFV-GGVTASSAGLAFIIALQ 458
LE D S YDKSQ LA+ E + G ++E+ N V V + + +I Q
Sbjct: 2093 LEIDISKYDKSQRELALDFECKLMSYFGVDADIVELWFNAHVLTEVYDKTTKMKALIPYQ 2152
Query: 457 RKSGHGDTMLGNLAYNFTSIGHSVGYENMRGCIGKGDDNVVLL--LSQLFEGEHAAVVAK 284
RKSG T +GN + + + + + GDD+++ + + + +H
Sbjct: 2153 RKSGDASTFIGNTLFLMAVVCDLIPVSELEMALFSGDDSLLYGHDMDRYRDSQH------ 2206
Query: 283 KMGLYFNLETKMILHDVPAFSSGGFVPVGNRVVFFPDPLKLVELLGERQVDASRTIREQF 104
GL FNLE K ++ F S + V +R F PDP+K + LG + + E
Sbjct: 2207 -FGLKFNLEIKFFEFELSYFCSKFLLAVRDRWTFTPDPVKFMTKLGRHDLVNPLHVEEYR 2265
Query: 103 ISFQDRVSAYAEEGVPEAVHEWTRRRYKTDAD 8
ISF D V Y V +AV R RY D
Sbjct: 2266 ISFVDTVRNYRSYHVCKAVAVALRERYGVRTD 2297
>ref|YP_008858531.1| RdRp, partial [Carnation yellow fleck virus]
gi|318101892|gb|ADV40938.1| RdRp [Carnation yellow fleck
virus]
Length = 492
Score = 77.4 bits (189), Expect = 3e-12
Identities = 58/205 (28%), Positives = 92/205 (44%), Gaps = 2/205 (0%)
Frame = -1
Query: 631 EGDSSMYDKSQSLLAMLIEVVMFEELGCAVTVIEM-LKNTFVGGVTASSAGLAFIIALQR 455
E D S YDKSQ E +++E G ++++ ++ + T L+F + QR
Sbjct: 222 EIDFSKYDKSQDAFIKSFERTLYKEFGFDEELLDVWMQGEYTSNATTLDGQLSFSVDHQR 281
Query: 454 KSGHGDTMLGNLAYNFTSIGHSVGYENMRGCIGKGDDNVVLLLSQLFEGEHAAVVAKKMG 275
KSG +T +GN + N + GDD+++ S + A + ++G
Sbjct: 282 KSGASNTWIGNSIVTLGILSMFYHTCNFKALFVSGDDSLIFSESPIKNSADA--MCSELG 339
Query: 274 LYFNLETKMILHDVPAFSSGGFVPVGNRVVFFPDPLKLVELLGERQVDAS-RTIREQFIS 98
ETK + VP F S FV G+ V F PDP KL+ LG + D S + E F S
Sbjct: 340 F----ETKFLTPSVPYFCSKFFVMTGHDVFFVPDPYKLLVKLGASKDDVSDEFLFEGFTS 395
Query: 97 FQDRVSAYAEEGVPEAVHEWTRRRY 23
F+D +E V + + + +Y
Sbjct: 396 FRDLTKDLVDERVIQLLTHFVHSKY 420
>ref|NP_835244.2| polyprotein [Grapevine rootstock stem lesion associated virus]
Length = 3390
Score = 76.6 bits (187), Expect = 6e-12
Identities = 66/209 (31%), Positives = 94/209 (44%), Gaps = 6/209 (2%)
Frame = -1
Query: 631 EGDSSMYDKSQSLLAMLIEVVMFEELGCAVTVIEMLKNTFVGGVTASSAG-----LAFII 467
E D S YDKSQ E VM++ELG V E L ++ G S A L+F I
Sbjct: 3122 EVDFSKYDKSQDAFVKSFEEVMYKELG----VDEELLAIWMCGERLSIANTLDGQLSFTI 3177
Query: 466 ALQRKSGHGDTMLGNLAYNFTSIGHSVGYENMRGCIGKGDDNVVLLLSQLFEGEHAAVVA 287
QRKSG +T +GN + + GDD+++ +++ +A +
Sbjct: 3178 ENQRKSGASNTWIGNSLVTLGILSLYYDVRHFEALYVSGDDSLIFSRNKI--SNYADDIC 3235
Query: 286 KKMGLYFNLETKMILHDVPAFSSGGFVPVGNRVVFFPDPLKLVELLGERQVDASRT-IRE 110
MG ETK + VP F S V G++ F PDP KL LG + D S + E
Sbjct: 3236 ADMGF----ETKFMSPSVPYFCSKFVVMCGHKTFFVPDPYKLFVKLGAVKEDVSMDFLFE 3291
Query: 109 QFISFQDRVSAYAEEGVPEAVHEWTRRRY 23
F SF+D S + +E V + + E +Y
Sbjct: 3292 TFTSFKDLTSDFNDERVIQKLAELVALKY 3320
>ref|NP_835337.1| replicase [Grapevine rootstock stem lesion associated virus]
Length = 2549
Score = 76.6 bits (187), Expect = 6e-12
Identities = 66/209 (31%), Positives = 94/209 (44%), Gaps = 6/209 (2%)
Frame = -1
Query: 631 EGDSSMYDKSQSLLAMLIEVVMFEELGCAVTVIEMLKNTFVGGVTASSAG-----LAFII 467
E D S YDKSQ E VM++ELG V E L ++ G S A L+F I
Sbjct: 2281 EVDFSKYDKSQDAFVKSFEEVMYKELG----VDEELLAIWMCGERLSIANTLDGQLSFTI 2336
Query: 466 ALQRKSGHGDTMLGNLAYNFTSIGHSVGYENMRGCIGKGDDNVVLLLSQLFEGEHAAVVA 287
QRKSG +T +GN + + GDD+++ +++ +A +
Sbjct: 2337 ENQRKSGASNTWIGNSLVTLGILSLYYDVRHFEALYVSGDDSLIFSRNKI--SNYADDIC 2394
Query: 286 KKMGLYFNLETKMILHDVPAFSSGGFVPVGNRVVFFPDPLKLVELLGERQVDASRT-IRE 110
MG ETK + VP F S V G++ F PDP KL LG + D S + E
Sbjct: 2395 ADMGF----ETKFMSPSVPYFCSKFVVMCGHKTFFVPDPYKLFVKLGAVKEDVSMDFLFE 2450
Query: 109 QFISFQDRVSAYAEEGVPEAVHEWTRRRY 23
F SF+D S + +E V + + E +Y
Sbjct: 2451 TFTSFKDLTSDFNDERVIQKLAELVALKY 2479
>gb|AAN63467.1|AF314061_2 RNA-dependent RNA polymerase [grapevine rootstock stem lesion
associated virus]
Length = 459
Score = 76.6 bits (187), Expect = 6e-12
Identities = 66/209 (31%), Positives = 94/209 (44%), Gaps = 6/209 (2%)
Frame = -1
Query: 631 EGDSSMYDKSQSLLAMLIEVVMFEELGCAVTVIEMLKNTFVGGVTASSAG-----LAFII 467
E D S YDKSQ E VM++ELG V E L ++ G S A L+F I
Sbjct: 191 EVDFSKYDKSQDAFVKSFEEVMYKELG----VDEELLAIWMCGERLSIANTLDGQLSFTI 246
Query: 466 ALQRKSGHGDTMLGNLAYNFTSIGHSVGYENMRGCIGKGDDNVVLLLSQLFEGEHAAVVA 287
QRKSG +T +GN + + GDD+++ +++ +A +
Sbjct: 247 ENQRKSGASNTWIGNSLVTLGILSLYYDVRHFEALYVSGDDSLIFSRNKI--SNYADDIC 304
Query: 286 KKMGLYFNLETKMILHDVPAFSSGGFVPVGNRVVFFPDPLKLVELLGERQVDASRT-IRE 110
MG ETK + VP F S V G++ F PDP KL LG + D S + E
Sbjct: 305 ADMGF----ETKFMSPSVPYFCSKFVVMCGHKTFFVPDPYKLFVKLGAVKEDVSMDFLFE 360
Query: 109 QFISFQDRVSAYAEEGVPEAVHEWTRRRY 23
F SF+D S + +E V + + E +Y
Sbjct: 361 TFTSFKDLTSDFNDERVIQKLAELVALKY 389