BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00011016
         (1513 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278958.1| PREDICTED: photosystem II stability/assembly...   649   0.0  
ref|XP_007043300.1| Photosystem II stability/assembly factor, ch...   642   0.0  
ref|XP_004297743.1| PREDICTED: photosystem II stability/assembly...   629   e-178
ref|XP_006437570.1| hypothetical protein CICLE_v10031672mg [Citr...   622   e-175
gb|EXB55168.1| hypothetical protein L484_018094 [Morus notabilis]     622   e-175
ref|XP_003540641.1| PREDICTED: photosystem II stability/assembly...   620   e-175
ref|XP_004135957.1| PREDICTED: photosystem II stability/assembly...   619   e-174
ref|XP_002520925.1| Photosystem II stability/assembly factor HCF...   619   e-174
ref|XP_006847864.1| hypothetical protein AMTR_s00029p00083110 [A...   617   e-174
ref|XP_003607248.1| Photosystem II stability/assembly factor HCF...   612   e-172
ref|XP_002310654.1| hypothetical protein POPTR_0007s07780g [Popu...   611   e-172
gb|AHM26647.1| photosystem II stability/assembly factor protein ...   610   e-172
ref|XP_007131634.1| hypothetical protein PHAVU_011G029800g [Phas...   608   e-171
ref|XP_007222695.1| hypothetical protein PRUPE_ppa006376mg [Prun...   608   e-171
ref|XP_004505712.1| PREDICTED: LOW QUALITY PROTEIN: photosystem ...   601   e-169
ref|XP_006394580.1| hypothetical protein EUTSA_v10004338mg [Eutr...   599   e-169
ref|XP_004966550.1| PREDICTED: photosystem II stability/assembly...   597   e-168
ref|XP_002439075.1| hypothetical protein SORBIDRAFT_10g031120 [S...   597   e-168
ref|NP_197703.1| photosystem II stability/assembly factor HCF136...   595   e-167
ref|XP_006354977.1| PREDICTED: photosystem II stability/assembly...   593   e-167

>ref|XP_002278958.1| PREDICTED: photosystem II stability/assembly factor HCF136,
            chloroplastic [Vitis vinifera]
            gi|297737938|emb|CBI27139.3| unnamed protein product
            [Vitis vinifera]
          Length = 404

 Score =  649 bits (1675), Expect = 0.0
 Identities = 324/407 (79%), Positives = 351/407 (86%), Gaps = 8/407 (1%)
 Frame = +3

Query: 78   MATLQLTDYSNPSTTALRLKPSLTSVFSTNSHRQCKPHSRFT-------PKASLSRRQLV 236
            MATLQL+DY NP    + LKPSL S F    HR C   SR          K SL+RR L+
Sbjct: 1    MATLQLSDYCNP---VVALKPSLKSFFIKTDHRNCCGASRVRVVPRACLQKPSLTRRHLL 57

Query: 237  SQAATFSLTPLVVVFDLPAKSEEAL-SDWERVYLPIDPGVVLLDISFVPDDSNHGFLLGT 413
            ++ A  S+ PL++  + PAKSEE L S+WERVYLPIDPGVVLLDI+FVPDD +HGFLLGT
Sbjct: 58   AETAAISVAPLILGIEPPAKSEEPLLSEWERVYLPIDPGVVLLDIAFVPDDLSHGFLLGT 117

Query: 414  RQTLLETKDGGNTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESW 593
            RQT++ETKDGGNTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKP+ILLYTSDAGESW
Sbjct: 118  RQTIMETKDGGNTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPSILLYTSDAGESW 177

Query: 594  ERIPLSNQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNRGYNWKAAIQETVSATLNRTVS 773
            ERIPLS QLPGD+VYIKATGEKSAEMVTDEGAIYVTSNRGYNW+AA+QETVSATLNRTVS
Sbjct: 178  ERIPLSAQLPGDIVYIKATGEKSAEMVTDEGAIYVTSNRGYNWRAAVQETVSATLNRTVS 237

Query: 774  SGISGASYYTGTFNTVNRSPDGNYVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQNMGW 953
            SGISGASYYTGTFNTVNRSPDG+YVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQNMGW
Sbjct: 238  SGISGASYYTGTFNTVNRSPDGSYVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQNMGW 297

Query: 954  RADXXXXXXXXXXXXXXSKGKGITEEFEEVPVQSRGFGILDVGYRSQAEAWAAGGSGILL 1133
            RAD              SKG GI+E+FEE+PVQSRGFGILDVGYRS+ EAWAAGGSG+LL
Sbjct: 298  RADGGLWLLVRGGGLYLSKGTGISEDFEEIPVQSRGFGILDVGYRSKEEAWAAGGSGVLL 357

Query: 1134 RTTNGGKTWTRDKAADNIAANLYSVKFINDRKGFVLGNDGVLLRYLG 1274
            RTTNGGKTWTRDKAADNIAANLYSVKFI+D KGFVLGNDGVLLR+LG
Sbjct: 358  RTTNGGKTWTRDKAADNIAANLYSVKFIDDTKGFVLGNDGVLLRFLG 404


>ref|XP_007043300.1| Photosystem II stability/assembly factor, chloroplast (HCF136)
            isoform 1 [Theobroma cacao] gi|508707235|gb|EOX99131.1|
            Photosystem II stability/assembly factor, chloroplast
            (HCF136) isoform 1 [Theobroma cacao]
          Length = 411

 Score =  642 bits (1657), Expect = 0.0
 Identities = 328/416 (78%), Positives = 351/416 (84%), Gaps = 17/416 (4%)
 Frame = +3

Query: 78   MATLQLTDYSNPSTTALRLKPSLTSVFSTNS-HR-QCKPHSRFTPKASL----------- 218
            M  LQ++D SN       LKPSLTS+FS    HR Q +PH R   KASL           
Sbjct: 3    MPNLQVSDCSN-------LKPSLTSLFSPRFLHRSQTQPHPRLICKASLQQPHHSSSSSP 55

Query: 219  ---SRRQLVSQAATFSLTPLVV-VFDLPAKSEEALSDWERVYLPIDPGVVLLDISFVPDD 386
               +RRQL+SQ A+ SL+   +    LPAKSEE LS+WERVYLPIDPGVVLLDI+FVPDD
Sbjct: 56   TLVNRRQLISQTASLSLSVATLSALQLPAKSEEVLSEWERVYLPIDPGVVLLDIAFVPDD 115

Query: 387  SNHGFLLGTRQTLLETKDGGNTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILL 566
             NHGFLLGTRQT+LETKDGGNTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILL
Sbjct: 116  PNHGFLLGTRQTILETKDGGNTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILL 175

Query: 567  YTSDAGESWERIPLSNQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNRGYNWKAAIQETV 746
            YTSDAGESWERIPLS QLPGDMVYIKAT EKSAEMVTD+GAIYVTSNRG+NW+AA+QETV
Sbjct: 176  YTSDAGESWERIPLSAQLPGDMVYIKATDEKSAEMVTDQGAIYVTSNRGFNWRAAVQETV 235

Query: 747  SATLNRTVSSGISGASYYTGTFNTVNRSPDGNYVAVSSRGNFYLTWEPGQPYWQPHNRAV 926
            SATLNRTVSSGISGASYYTGTFNTVNRSPDG YVAVSSRGNFYLTWEPGQP+WQPHNRAV
Sbjct: 236  SATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAV 295

Query: 927  ARRIQNMGWRADXXXXXXXXXXXXXXSKGKGITEEFEEVPVQSRGFGILDVGYRSQAEAW 1106
            ARRIQNMGWRAD              SKG GITE+FEE+PVQSRGFGILDVGYRS  EAW
Sbjct: 296  ARRIQNMGWRADGGLWLLVRGGGLFLSKGTGITEDFEEIPVQSRGFGILDVGYRSMEEAW 355

Query: 1107 AAGGSGILLRTTNGGKTWTRDKAADNIAANLYSVKFINDRKGFVLGNDGVLLRYLG 1274
            AAGGSG+LLRTTNGGK+WTRDKAADNIAANLYSVKFI+D+KGFVLGNDGVLLRYLG
Sbjct: 356  AAGGSGVLLRTTNGGKSWTRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG 411


>ref|XP_004297743.1| PREDICTED: photosystem II stability/assembly factor HCF136,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 406

 Score =  629 bits (1623), Expect = e-178
 Identities = 321/403 (79%), Positives = 343/403 (85%), Gaps = 6/403 (1%)
 Frame = +3

Query: 84   TLQLTDYSNPSTTALRLKPSLTSVFSTNSHRQCKPHS--RFTPKASLSRRQLVSQAATFS 257
            TLQL      S   L LKPSLTS+F +   R     S  RF P+ASL+RR LVS  A  S
Sbjct: 4    TLQLLSTDFSSNPMLLLKPSLTSLFVSTPPRHFPTTSLPRFIPRASLTRRHLVSDTAALS 63

Query: 258  LT---PLVVVFDLPAKSEE-ALSDWERVYLPIDPGVVLLDISFVPDDSNHGFLLGTRQTL 425
            L    PL+    LPAKSEE ALS+WE+V LPIDPGVVLLDI+FVPDD  HGFLLGTRQTL
Sbjct: 64   LALTVPLLGSSALPAKSEEPALSEWEKVSLPIDPGVVLLDIAFVPDDPKHGFLLGTRQTL 123

Query: 426  LETKDGGNTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWERIP 605
            LETKDGG +W PRSIPSAEDEDFNYRFN+ISFKGKEGWIVGKPAILL+TSDAG+SWERIP
Sbjct: 124  LETKDGGQSWAPRSIPSAEDEDFNYRFNAISFKGKEGWIVGKPAILLHTSDAGDSWERIP 183

Query: 606  LSNQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNRGYNWKAAIQETVSATLNRTVSSGIS 785
            LS+QLPGDMVYIKATG+KSAEMVTDEGAIYVTSNRGYNWKAA+QETVSATLNRTVSSGIS
Sbjct: 184  LSSQLPGDMVYIKATGDKSAEMVTDEGAIYVTSNRGYNWKAAVQETVSATLNRTVSSGIS 243

Query: 786  GASYYTGTFNTVNRSPDGNYVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQNMGWRADX 965
            GASYYTGTFN VNRSPDG+YVAVSSRGNF+LTWEPGQPYWQPHNR+VARRIQNMGWRAD 
Sbjct: 244  GASYYTGTFNAVNRSPDGSYVAVSSRGNFFLTWEPGQPYWQPHNRSVARRIQNMGWRADG 303

Query: 966  XXXXXXXXXXXXXSKGKGITEEFEEVPVQSRGFGILDVGYRSQAEAWAAGGSGILLRTTN 1145
                         SKG GITEEFEEVPVQSRGFGILDVGYRS+ EAWAAGGSGILLRTTN
Sbjct: 304  GLWLLVRGGGLFLSKGTGITEEFEEVPVQSRGFGILDVGYRSKDEAWAAGGSGILLRTTN 363

Query: 1146 GGKTWTRDKAADNIAANLYSVKFINDRKGFVLGNDGVLLRYLG 1274
            GGK+W RDKAADNIAANLYSVKFI+D +GFVLGNDGVLLRYLG
Sbjct: 364  GGKSWVRDKAADNIAANLYSVKFIDDNQGFVLGNDGVLLRYLG 406


>ref|XP_006437570.1| hypothetical protein CICLE_v10031672mg [Citrus clementina]
            gi|567890101|ref|XP_006437571.1| hypothetical protein
            CICLE_v10031672mg [Citrus clementina]
            gi|568862130|ref|XP_006484542.1| PREDICTED: photosystem
            II stability/assembly factor HCF136, chloroplastic-like
            isoform X1 [Citrus sinensis]
            gi|568862132|ref|XP_006484543.1| PREDICTED: photosystem
            II stability/assembly factor HCF136, chloroplastic-like
            isoform X2 [Citrus sinensis] gi|557539766|gb|ESR50810.1|
            hypothetical protein CICLE_v10031672mg [Citrus
            clementina] gi|557539767|gb|ESR50811.1| hypothetical
            protein CICLE_v10031672mg [Citrus clementina]
          Length = 415

 Score =  622 bits (1605), Expect = e-175
 Identities = 313/409 (76%), Positives = 345/409 (84%), Gaps = 21/409 (5%)
 Frame = +3

Query: 111  PSTTALRLKPSLTSVFST---------------NSHRQCKPHSR--FTPKASLSRRQLVS 239
            PS   + +KPSL+S+F+                ++ R C   S    +  +SLSRRQ VS
Sbjct: 7    PSEPIMLVKPSLSSLFAPRLSRANAQAQQPRFISTSRACSLPSSDSSSSSSSLSRRQFVS 66

Query: 240  QAATFSLTPLVV----VFDLPAKSEEALSDWERVYLPIDPGVVLLDISFVPDDSNHGFLL 407
            Q AT SL+  +     +++ PAKSEEALS WERVY+P+DPGVVLLDI+FVPDD NHGFLL
Sbjct: 67   QTATLSLSISLAATTGLYEQPAKSEEALSAWERVYIPVDPGVVLLDIAFVPDDLNHGFLL 126

Query: 408  GTRQTLLETKDGGNTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGE 587
            GTRQTLLETKDGG TW PRSIPSAE+EDFNYRFNSISFKGKEGWIVGKPAILL+TSDAGE
Sbjct: 127  GTRQTLLETKDGGKTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLHTSDAGE 186

Query: 588  SWERIPLSNQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNRGYNWKAAIQETVSATLNRT 767
            SWERIPLS+QLPGDMVYIKATGEKSAEMVTDEGAIY+TSNRGYNW+AA+QETVSATLNRT
Sbjct: 187  SWERIPLSSQLPGDMVYIKATGEKSAEMVTDEGAIYITSNRGYNWRAAVQETVSATLNRT 246

Query: 768  VSSGISGASYYTGTFNTVNRSPDGNYVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQNM 947
            VSSGISGASYYTGTFNTVNRSPDG+YVAVSSRGNFYLTW+PGQ +WQPHNRAVARRIQNM
Sbjct: 247  VSSGISGASYYTGTFNTVNRSPDGSYVAVSSRGNFYLTWQPGQAFWQPHNRAVARRIQNM 306

Query: 948  GWRADXXXXXXXXXXXXXXSKGKGITEEFEEVPVQSRGFGILDVGYRSQAEAWAAGGSGI 1127
            GWRAD              SKG GITEEFEEVPVQSRGFGILDVGYRSQ EAWAAGGSG+
Sbjct: 307  GWRADGGLWLLVRGGGLFLSKGTGITEEFEEVPVQSRGFGILDVGYRSQDEAWAAGGSGV 366

Query: 1128 LLRTTNGGKTWTRDKAADNIAANLYSVKFINDRKGFVLGNDGVLLRYLG 1274
            LL+TTNGGKTW R+KAADNIAANLYSVKFIN++KGFVLGNDGVLL+YLG
Sbjct: 367  LLKTTNGGKTWIREKAADNIAANLYSVKFINEKKGFVLGNDGVLLQYLG 415


>gb|EXB55168.1| hypothetical protein L484_018094 [Morus notabilis]
          Length = 415

 Score =  622 bits (1603), Expect = e-175
 Identities = 319/415 (76%), Positives = 343/415 (82%), Gaps = 19/415 (4%)
 Frame = +3

Query: 87   LQLTDYSNPSTTALRLKPSLTSVFSTNS-----HRQCKPHSRFTPKAS-----------L 218
            LQL D S P    + LKPS TS+F  N+      R  +P  RF PKAS           L
Sbjct: 5    LQLPDCSKP---VILLKPSFTSLFFNNTTSPRHFRSSQPPPRFIPKASSSSSSSSSSSLL 61

Query: 219  SRRQLVSQAATFSLT---PLVVVFDLPAKSEEALSDWERVYLPIDPGVVLLDISFVPDDS 389
             RR+ +++ A  SL+   P +     PAKSE+ALS+WER YLPIDPGVVLLDI+FVPDD 
Sbjct: 62   CRRRFIAETAAVSLSLASPFLGPVQ-PAKSEDALSEWERCYLPIDPGVVLLDIAFVPDDL 120

Query: 390  NHGFLLGTRQTLLETKDGGNTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLY 569
            NHGFLLGTRQT+LETKDGGNTWVPRSIPSAEDEDFNYRFNSISF GKEGWIVGKPAILLY
Sbjct: 121  NHGFLLGTRQTILETKDGGNTWVPRSIPSAEDEDFNYRFNSISFIGKEGWIVGKPAILLY 180

Query: 570  TSDAGESWERIPLSNQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNRGYNWKAAIQETVS 749
            TSDAGE+WERI LS QLPGDMVYIKATGEK AEMVTD+GAIYVTSN+GYNW+AA+QETVS
Sbjct: 181  TSDAGENWERIALSAQLPGDMVYIKATGEKGAEMVTDQGAIYVTSNKGYNWRAAVQETVS 240

Query: 750  ATLNRTVSSGISGASYYTGTFNTVNRSPDGNYVAVSSRGNFYLTWEPGQPYWQPHNRAVA 929
            ATLNRTVSSGISGASYYTGTFNTVNRSPDG YVAVSSRGNFYLTWEPGQP+WQPHNRAVA
Sbjct: 241  ATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAVA 300

Query: 930  RRIQNMGWRADXXXXXXXXXXXXXXSKGKGITEEFEEVPVQSRGFGILDVGYRSQAEAWA 1109
            RRIQNMGWRAD              SKG GITE+FEEV VQSRGFGILDVGYRSQ EAWA
Sbjct: 301  RRIQNMGWRADGGLWLLVRGGGLFLSKGTGITEDFEEVAVQSRGFGILDVGYRSQEEAWA 360

Query: 1110 AGGSGILLRTTNGGKTWTRDKAADNIAANLYSVKFINDRKGFVLGNDGVLLRYLG 1274
            AGGSGILLRTTNGGK+W RDKAADNIAANLYSVKFI+D+KGFVLGNDGVLLRYLG
Sbjct: 361  AGGSGILLRTTNGGKSWIRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG 415


>ref|XP_003540641.1| PREDICTED: photosystem II stability/assembly factor HCF136,
            chloroplastic-like [Glycine max]
          Length = 393

 Score =  620 bits (1599), Expect = e-175
 Identities = 312/399 (78%), Positives = 339/399 (84%)
 Frame = +3

Query: 78   MATLQLTDYSNPSTTALRLKPSLTSVFSTNSHRQCKPHSRFTPKASLSRRQLVSQAATFS 257
            MATL+LT   + STT  R     T  FS N     K  S     +  SRR+ +++ A  S
Sbjct: 1    MATLRLT--FSDSTTLFRPSLPSTRTFSRNRSLIVKASSSEDDFSRSSRRRFIAETAALS 58

Query: 258  LTPLVVVFDLPAKSEEALSDWERVYLPIDPGVVLLDISFVPDDSNHGFLLGTRQTLLETK 437
            ++    +  L A+SE+ALS+WERVYLPIDPGVVLLDI+FVPDD NHGFLLGTRQT+LETK
Sbjct: 59   VS----LPQLTARSEDALSEWERVYLPIDPGVVLLDIAFVPDDPNHGFLLGTRQTILETK 114

Query: 438  DGGNTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWERIPLSNQ 617
            DGGNTW PRSIPSAEDEDFNYRFNSISFKGKEGWIVGKP+ILLYTSDAG+SWERIPLS +
Sbjct: 115  DGGNTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPSILLYTSDAGDSWERIPLSAE 174

Query: 618  LPGDMVYIKATGEKSAEMVTDEGAIYVTSNRGYNWKAAIQETVSATLNRTVSSGISGASY 797
            LPGDMVYIKATGEKSAEMVTDEGAIYVT+NRGYNW+AA+QETVSATLNRTVSSGISGASY
Sbjct: 175  LPGDMVYIKATGEKSAEMVTDEGAIYVTANRGYNWRAAVQETVSATLNRTVSSGISGASY 234

Query: 798  YTGTFNTVNRSPDGNYVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQNMGWRADXXXXX 977
            YTGTFNTVNRSPDG YVAVSSRGNFYLTWEPGQP+WQPHNRAVARRIQNMGWRAD     
Sbjct: 235  YTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAVARRIQNMGWRADGGLWL 294

Query: 978  XXXXXXXXXSKGKGITEEFEEVPVQSRGFGILDVGYRSQAEAWAAGGSGILLRTTNGGKT 1157
                     SKGKG+TEEFEEVPVQSRGFGILDVGYRS  EAWAAGGSGILLRTTNGGK+
Sbjct: 295  LVRGGGLYLSKGKGLTEEFEEVPVQSRGFGILDVGYRSTDEAWAAGGSGILLRTTNGGKS 354

Query: 1158 WTRDKAADNIAANLYSVKFINDRKGFVLGNDGVLLRYLG 1274
            W RDKAADNIAANLYSVKFI+++KGFVLGNDGVLLRYLG
Sbjct: 355  WIRDKAADNIAANLYSVKFIDEKKGFVLGNDGVLLRYLG 393


>ref|XP_004135957.1| PREDICTED: photosystem II stability/assembly factor HCF136,
            chloroplastic-like [Cucumis sativus]
            gi|449488796|ref|XP_004158174.1| PREDICTED: photosystem
            II stability/assembly factor HCF136, chloroplastic-like
            [Cucumis sativus]
          Length = 406

 Score =  619 bits (1596), Expect = e-174
 Identities = 319/409 (77%), Positives = 344/409 (84%), Gaps = 10/409 (2%)
 Frame = +3

Query: 78   MATLQLTDYSNPSTTALRLKPSLTSVFSTNSHRQCKPH--SRFTPKASL-----SRRQLV 236
            MATLQ      PS T+  L  S TS   + S  Q  P   S  TPKASL     +RR  V
Sbjct: 1    MATLQ-QQLLKPSWTS-SLFASSTSPRHSLSQPQLLPRTLSSTTPKASLHNSSINRRHFV 58

Query: 237  SQAA---TFSLTPLVVVFDLPAKSEEALSDWERVYLPIDPGVVLLDISFVPDDSNHGFLL 407
            +  A   + SL+P +     PAKSEE+LS+WER+YLPIDPGVVLLDI+FVPDD NHGFLL
Sbjct: 59   ADTAAAVSLSLSPFIAPVQ-PAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDMNHGFLL 117

Query: 408  GTRQTLLETKDGGNTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGE 587
            GTRQT+LETKDGG TW PRSIPSAE+EDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGE
Sbjct: 118  GTRQTILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGE 177

Query: 588  SWERIPLSNQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNRGYNWKAAIQETVSATLNRT 767
            SWERIPLS QLPGDMVYIKATGEKSAEMVTDEGAIYVTSN+GYNWKAA+QETVSATLNRT
Sbjct: 178  SWERIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRT 237

Query: 768  VSSGISGASYYTGTFNTVNRSPDGNYVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQNM 947
            VSSGISGASYYTGTFNTVNRSPDG YVAVSSRGNFYLTWEPGQP+WQPHNRA+ARRIQNM
Sbjct: 238  VSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNM 297

Query: 948  GWRADXXXXXXXXXXXXXXSKGKGITEEFEEVPVQSRGFGILDVGYRSQAEAWAAGGSGI 1127
            GWRAD              SKG GI+EEFEEVPVQSRGFGILDVGYRS+ EAWAAGGSG+
Sbjct: 298  GWRADGGLWLLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGV 357

Query: 1128 LLRTTNGGKTWTRDKAADNIAANLYSVKFINDRKGFVLGNDGVLLRYLG 1274
            LL+TTNGG++WTRDKAADNIAANLYSVKFIND+KGFVLGNDGVLL+YLG
Sbjct: 358  LLKTTNGGRSWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 406


>ref|XP_002520925.1| Photosystem II stability/assembly factor HCF136, chloroplast
            precursor, putative [Ricinus communis]
            gi|223539891|gb|EEF41470.1| Photosystem II
            stability/assembly factor HCF136, chloroplast precursor,
            putative [Ricinus communis]
          Length = 397

 Score =  619 bits (1595), Expect = e-174
 Identities = 314/396 (79%), Positives = 336/396 (84%), Gaps = 18/396 (4%)
 Frame = +3

Query: 141  SLTSVFSTNSHRQCKPHS----RFTPKASLS-----------RRQLVSQAATFSLTPLV- 272
            S TS F+ N     K HS    RF PKASL+           RRQ +SQ AT SL PL+ 
Sbjct: 3    SSTSAFTANIPFLNKSHSHSQSRFVPKASLNNVHLPHHHSLNRRQFLSQTATVSL-PLLS 61

Query: 273  --VVFDLPAKSEEALSDWERVYLPIDPGVVLLDISFVPDDSNHGFLLGTRQTLLETKDGG 446
              ++   PA +EE LS+WERVYLP DPGVVLLDI+FVPDD NHGFLLGTRQT+LETKDGG
Sbjct: 62   SPLIIQQPANAEETLSEWERVYLPSDPGVVLLDIAFVPDDMNHGFLLGTRQTILETKDGG 121

Query: 447  NTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWERIPLSNQLPG 626
            NTWV RSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAG+SW+RIPLS QLPG
Sbjct: 122  NTWVSRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGDSWQRIPLSAQLPG 181

Query: 627  DMVYIKATGEKSAEMVTDEGAIYVTSNRGYNWKAAIQETVSATLNRTVSSGISGASYYTG 806
            DMVYIKATGEKSAEMVTD+GAIY+TSN GYNW+AA+QETVSATLNRTVSSGISGASYYTG
Sbjct: 182  DMVYIKATGEKSAEMVTDQGAIYITSNGGYNWRAAVQETVSATLNRTVSSGISGASYYTG 241

Query: 807  TFNTVNRSPDGNYVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQNMGWRADXXXXXXXX 986
            TFNTVNRSPDGNYVAVSSRGNFYLTWEPGQP+WQPHNRAVARRIQNMGWRAD        
Sbjct: 242  TFNTVNRSPDGNYVAVSSRGNFYLTWEPGQPFWQPHNRAVARRIQNMGWRADGGLWLLVR 301

Query: 987  XXXXXXSKGKGITEEFEEVPVQSRGFGILDVGYRSQAEAWAAGGSGILLRTTNGGKTWTR 1166
                  SKG GI+E+FEE+ VQSRGFGILDVGYRS+ EAWAAGGSGILLRTTNGGKTWTR
Sbjct: 302  GGGLYLSKGTGISEDFEEISVQSRGFGILDVGYRSKDEAWAAGGSGILLRTTNGGKTWTR 361

Query: 1167 DKAADNIAANLYSVKFINDRKGFVLGNDGVLLRYLG 1274
            DKAAD+IAANLYSVKFIND KGFVLGNDGVLLRYLG
Sbjct: 362  DKAADSIAANLYSVKFINDSKGFVLGNDGVLLRYLG 397


>ref|XP_006847864.1| hypothetical protein AMTR_s00029p00083110 [Amborella trichopoda]
            gi|548851169|gb|ERN09445.1| hypothetical protein
            AMTR_s00029p00083110 [Amborella trichopoda]
          Length = 412

 Score =  617 bits (1591), Expect = e-174
 Identities = 315/411 (76%), Positives = 342/411 (83%), Gaps = 12/411 (2%)
 Frame = +3

Query: 78   MATLQLTD-----YSNPSTTALRLKPSLTSVFSTNSHRQCKP------HSRFTPKASLSR 224
            MATL L       Y  P  + + ++    SVF T S   C+P        R    ASLSR
Sbjct: 7    MATLHLQGLNYLLYKKPQASKMVIR----SVFLTRSGH-CQPPRAQLGEPRSQNLASLSR 61

Query: 225  RQLVSQAATFSLT-PLVVVFDLPAKSEEALSDWERVYLPIDPGVVLLDISFVPDDSNHGF 401
            R  +S+ A  S+  P +V F+  AK+++ LS+WERVYLPIDPGVVLLDI+FVPD+ NHGF
Sbjct: 62   RLFLSETAAISVALPSLVRFEGEAKADDGLSEWERVYLPIDPGVVLLDIAFVPDELNHGF 121

Query: 402  LLGTRQTLLETKDGGNTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDA 581
            LLGTRQT+LETKDGGNTW PRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTS+A
Sbjct: 122  LLGTRQTILETKDGGNTWFPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSNA 181

Query: 582  GESWERIPLSNQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNRGYNWKAAIQETVSATLN 761
            GESWERIPLSNQLPGDMVYIKATGEKSAEMVTD+GAIYVTSNRGYNWKAA+QETVSATLN
Sbjct: 182  GESWERIPLSNQLPGDMVYIKATGEKSAEMVTDQGAIYVTSNRGYNWKAAVQETVSATLN 241

Query: 762  RTVSSGISGASYYTGTFNTVNRSPDGNYVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQ 941
            RTVSSGISGASYYTGTFNTVNRSPDGNYVAVSSRGNFYLTWEPGQPYWQPHNRA ARRIQ
Sbjct: 242  RTVSSGISGASYYTGTFNTVNRSPDGNYVAVSSRGNFYLTWEPGQPYWQPHNRAAARRIQ 301

Query: 942  NMGWRADXXXXXXXXXXXXXXSKGKGITEEFEEVPVQSRGFGILDVGYRSQAEAWAAGGS 1121
            NMGWRAD              SKG GITE+FEE+PVQSRGFGILDVGYRS+ EAWAAGGS
Sbjct: 302  NMGWRADGGLWLLVRGGGLYLSKGTGITEDFEEIPVQSRGFGILDVGYRSKDEAWAAGGS 361

Query: 1122 GILLRTTNGGKTWTRDKAADNIAANLYSVKFINDRKGFVLGNDGVLLRYLG 1274
            GILLRT NGGKTW RDKAAD+IAANLYSVKFI+++ GFVLGNDGVLLRYLG
Sbjct: 362  GILLRTMNGGKTWIRDKAADSIAANLYSVKFIDEKTGFVLGNDGVLLRYLG 412


>ref|XP_003607248.1| Photosystem II stability/assembly factor HCF136 [Medicago truncatula]
            gi|355508303|gb|AES89445.1| Photosystem II
            stability/assembly factor HCF136 [Medicago truncatula]
          Length = 396

 Score =  612 bits (1577), Expect = e-172
 Identities = 316/403 (78%), Positives = 336/403 (83%), Gaps = 4/403 (0%)
 Frame = +3

Query: 78   MATLQLTDYSNPSTTALRLKPSLTSVFSTNSHRQCKPHSRFTPKASL----SRRQLVSQA 245
            MATLQ T +S+ +TT  R    L S  ST  H   +P S F  KASL    +RRQ +++ 
Sbjct: 1    MATLQFT-FSDSTTTLCRPLSQLPSSKSTIIHSP-RPRS-FVVKASLEPSRTRRQFIAET 57

Query: 246  ATFSLTPLVVVFDLPAKSEEALSDWERVYLPIDPGVVLLDISFVPDDSNHGFLLGTRQTL 425
               S    V++    AKSEE LS+WERVYLPIDPGVVLLDI+FVP D NHGFLLGTRQTL
Sbjct: 58   TAIS----VLLPSQLAKSEETLSEWERVYLPIDPGVVLLDIAFVPQDPNHGFLLGTRQTL 113

Query: 426  LETKDGGNTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWERIP 605
            LETKDGG TW PRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYT DAGESWERIP
Sbjct: 114  LETKDGGRTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTPDAGESWERIP 173

Query: 606  LSNQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNRGYNWKAAIQETVSATLNRTVSSGIS 785
            LS +LPGDMVYIKAT EKSAEMVTDEGAIYVTSNRGYNWKAA+QE+VSATLNRTVSSGIS
Sbjct: 174  LSAELPGDMVYIKATNEKSAEMVTDEGAIYVTSNRGYNWKAAVQESVSATLNRTVSSGIS 233

Query: 786  GASYYTGTFNTVNRSPDGNYVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQNMGWRADX 965
            GASYYTGTFNTVNRSPDG YVAVSSRGNFY+TWEPGQ YWQPHNRAVARRIQNMGWRAD 
Sbjct: 234  GASYYTGTFNTVNRSPDGRYVAVSSRGNFYMTWEPGQAYWQPHNRAVARRIQNMGWRADG 293

Query: 966  XXXXXXXXXXXXXSKGKGITEEFEEVPVQSRGFGILDVGYRSQAEAWAAGGSGILLRTTN 1145
                         SKG GITEEFEE+PVQSRGFGILDVGYRS  EAWAAGGSGILLRT N
Sbjct: 294  GLWLLVRGGSLFLSKGTGITEEFEEIPVQSRGFGILDVGYRSTDEAWAAGGSGILLRTNN 353

Query: 1146 GGKTWTRDKAADNIAANLYSVKFINDRKGFVLGNDGVLLRYLG 1274
            GGK+W RDKAADNIAANLYSVKFI+D+KGFVLGNDGVLLRYLG
Sbjct: 354  GGKSWIRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG 396


>ref|XP_002310654.1| hypothetical protein POPTR_0007s07780g [Populus trichocarpa]
            gi|566180140|ref|XP_006380512.1| hypothetical protein
            POPTR_0007s07780g [Populus trichocarpa]
            gi|566180148|ref|XP_006380516.1| hypothetical protein
            POPTR_0007s07780g [Populus trichocarpa]
            gi|222853557|gb|EEE91104.1| hypothetical protein
            POPTR_0007s07780g [Populus trichocarpa]
            gi|550334364|gb|ERP58309.1| hypothetical protein
            POPTR_0007s07780g [Populus trichocarpa]
            gi|550334368|gb|ERP58313.1| hypothetical protein
            POPTR_0007s07780g [Populus trichocarpa]
          Length = 394

 Score =  611 bits (1576), Expect = e-172
 Identities = 303/392 (77%), Positives = 337/392 (85%), Gaps = 14/392 (3%)
 Frame = +3

Query: 141  SLTS-VFSTNSHRQCKPHSRFTP--------KASLSRRQLVSQAATFSLTPLVVVFDLP- 290
            SLTS  F+TN+    +P +  +P        +  L+RR  +SQ A+ S  PL+    L  
Sbjct: 3    SLTSPTFTTNTRCLQRPQNSHSPSQQPRLSQRPELNRRHFISQTASLSSLPLLSPLILNP 62

Query: 291  ----AKSEEALSDWERVYLPIDPGVVLLDISFVPDDSNHGFLLGTRQTLLETKDGGNTWV 458
                A +E++LS+WERVYLPIDPGVVLLDI+FVPDD+NHGFLLGTRQT++ETKDGGNTWV
Sbjct: 63   QQANAAAEDSLSEWERVYLPIDPGVVLLDIAFVPDDTNHGFLLGTRQTIMETKDGGNTWV 122

Query: 459  PRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWERIPLSNQLPGDMVY 638
             RSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYT+D+GE+WERIPLS QLPGDMVY
Sbjct: 123  QRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTADSGETWERIPLSAQLPGDMVY 182

Query: 639  IKATGEKSAEMVTDEGAIYVTSNRGYNWKAAIQETVSATLNRTVSSGISGASYYTGTFNT 818
            IKATGEKSAEMVTDEGAIY+TSNRGYNW+AA+QE+VSATLNRTVSSGISGASYYTGTFNT
Sbjct: 183  IKATGEKSAEMVTDEGAIYITSNRGYNWRAAVQESVSATLNRTVSSGISGASYYTGTFNT 242

Query: 819  VNRSPDGNYVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQNMGWRADXXXXXXXXXXXX 998
            VNRSP+GNYVAVSSRGNFYLTWEPGQ +WQPHNRA+ARRIQNMGWRAD            
Sbjct: 243  VNRSPNGNYVAVSSRGNFYLTWEPGQAFWQPHNRAIARRIQNMGWRADGGLWLLVRGGGL 302

Query: 999  XXSKGKGITEEFEEVPVQSRGFGILDVGYRSQAEAWAAGGSGILLRTTNGGKTWTRDKAA 1178
              SKG GI+EEFEE+PVQSRGFGILDVGYRS+ EAWAAGGSG+LLRTTNGGKTWTRDKAA
Sbjct: 303  YLSKGTGISEEFEEIPVQSRGFGILDVGYRSKEEAWAAGGSGVLLRTTNGGKTWTRDKAA 362

Query: 1179 DNIAANLYSVKFINDRKGFVLGNDGVLLRYLG 1274
            DNIAANLYSVKFI+D+KGFVLGNDGVLLRYLG
Sbjct: 363  DNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG 394


>gb|AHM26647.1| photosystem II stability/assembly factor protein [Pyrus x
            bretschneideri]
          Length = 408

 Score =  610 bits (1574), Expect = e-172
 Identities = 312/411 (75%), Positives = 344/411 (83%), Gaps = 9/411 (2%)
 Frame = +3

Query: 69   LQQMATLQLT-DYSNPSTTALRLKPSLTSVFSTNSHRQCKPHSRFTPKAS----LSRRQL 233
            ++   TLQLT D+S P+   + LKPSL    +    R      R +  +S    +SRR  
Sbjct: 1    MKMAPTLQLTTDFSKPT---IHLKPSLEFATTPRHFRTSLSIPRASSSSSDSSLVSRRHF 57

Query: 234  VSQAATFSLTPLVVVFD---LPAKSEE-ALSDWERVYLPIDPGVVLLDISFVPDDSNHGF 401
            VS+ A  SL+   +      LPAK+E+ ALS+WE+V LPIDPGVVLLDI+FVP+D  HGF
Sbjct: 58   VSETAALSLSLTTLPLFGSVLPAKAEDPALSEWEKVSLPIDPGVVLLDIAFVPEDPKHGF 117

Query: 402  LLGTRQTLLETKDGGNTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDA 581
            LLGTRQTLLETKDGG TWVPRSIPSAEDEDFNYRFN+ISFKGKEGWIVGKPAILL+TSD+
Sbjct: 118  LLGTRQTLLETKDGGETWVPRSIPSAEDEDFNYRFNAISFKGKEGWIVGKPAILLHTSDS 177

Query: 582  GESWERIPLSNQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNRGYNWKAAIQETVSATLN 761
            G+SWERIPLS+QLPGDMVYIKATGEKSAEMVTDEGAIYVTSNRGYNW+AA+QETVSATLN
Sbjct: 178  GDSWERIPLSSQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNRGYNWRAAVQETVSATLN 237

Query: 762  RTVSSGISGASYYTGTFNTVNRSPDGNYVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQ 941
            RTVSSGISGASYYTGTFN+VNRSPDG YVAVSSRGNFYLTWEPGQPYWQPHNR VARRIQ
Sbjct: 238  RTVSSGISGASYYTGTFNSVNRSPDGKYVAVSSRGNFYLTWEPGQPYWQPHNRTVARRIQ 297

Query: 942  NMGWRADXXXXXXXXXXXXXXSKGKGITEEFEEVPVQSRGFGILDVGYRSQAEAWAAGGS 1121
            NMGWRAD              SKG G+TE+FEEVPVQSRGFGILDVGYRS+ EAWAAGGS
Sbjct: 298  NMGWRADGGLWLLVRGGGLYLSKGTGLTEDFEEVPVQSRGFGILDVGYRSKDEAWAAGGS 357

Query: 1122 GILLRTTNGGKTWTRDKAADNIAANLYSVKFINDRKGFVLGNDGVLLRYLG 1274
            GILL+TTNGGKTWTRDKAADNIAANLYSVKFI+D+KGFVLGNDGVLLRYLG
Sbjct: 358  GILLQTTNGGKTWTRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG 408


>ref|XP_007131634.1| hypothetical protein PHAVU_011G029800g [Phaseolus vulgaris]
            gi|561004634|gb|ESW03628.1| hypothetical protein
            PHAVU_011G029800g [Phaseolus vulgaris]
          Length = 395

 Score =  608 bits (1569), Expect = e-171
 Identities = 305/399 (76%), Positives = 334/399 (83%)
 Frame = +3

Query: 78   MATLQLTDYSNPSTTALRLKPSLTSVFSTNSHRQCKPHSRFTPKASLSRRQLVSQAATFS 257
            MATLQ T   + S     L  S T   + +   +    S  +   S SRR+ +++    S
Sbjct: 1    MATLQFTFTDSTSLFRPSLPSSRTFPRNRSLVVKASSSSSSSDDISRSRRRFLAETTAIS 60

Query: 258  LTPLVVVFDLPAKSEEALSDWERVYLPIDPGVVLLDISFVPDDSNHGFLLGTRQTLLETK 437
            ++    +  L A++E+ LS+WERVYLPIDPGVVLLDISFVPDD NHGFLLGTRQT+LETK
Sbjct: 61   VS----LPHLAARAEDTLSEWERVYLPIDPGVVLLDISFVPDDPNHGFLLGTRQTILETK 116

Query: 438  DGGNTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWERIPLSNQ 617
            DGGNTW PRSIPSAEDEDFNYRFNSISFKG+EGWIVGKPAILLYT+DAG+SWERIPLS +
Sbjct: 117  DGGNTWAPRSIPSAEDEDFNYRFNSISFKGREGWIVGKPAILLYTADAGDSWERIPLSAE 176

Query: 618  LPGDMVYIKATGEKSAEMVTDEGAIYVTSNRGYNWKAAIQETVSATLNRTVSSGISGASY 797
            LPGDMVYIKATGEKSAEMVTDEGAIYVT+NRGYNW+AA+QETVSATLNRTVSSGISGASY
Sbjct: 177  LPGDMVYIKATGEKSAEMVTDEGAIYVTANRGYNWRAAVQETVSATLNRTVSSGISGASY 236

Query: 798  YTGTFNTVNRSPDGNYVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQNMGWRADXXXXX 977
            YTGTFNTVNRSP+G YVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQNMGWRAD     
Sbjct: 237  YTGTFNTVNRSPEGKYVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQNMGWRADGGLWL 296

Query: 978  XXXXXXXXXSKGKGITEEFEEVPVQSRGFGILDVGYRSQAEAWAAGGSGILLRTTNGGKT 1157
                     SKG G+TEEFEEVPVQSRGFGILDVGYRS  EAWAAGGSGILLRTTNGGK+
Sbjct: 297  LVRGGGLYLSKGTGLTEEFEEVPVQSRGFGILDVGYRSTEEAWAAGGSGILLRTTNGGKS 356

Query: 1158 WTRDKAADNIAANLYSVKFINDRKGFVLGNDGVLLRYLG 1274
            W RDKAADNIAANLYSVKFI+D+KGFVLGNDGVLLRYLG
Sbjct: 357  WIRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG 395


>ref|XP_007222695.1| hypothetical protein PRUPE_ppa006376mg [Prunus persica]
            gi|462419631|gb|EMJ23894.1| hypothetical protein
            PRUPE_ppa006376mg [Prunus persica]
          Length = 414

 Score =  608 bits (1569), Expect = e-171
 Identities = 316/418 (75%), Positives = 343/418 (82%), Gaps = 16/418 (3%)
 Frame = +3

Query: 69   LQQMATLQLT-DYSNPSTTALRLKPSL----------TSVFSTNSHRQCKPHSRFTPKAS 215
            ++   TLQLT D S P    + +KPSL          TS+     +   +  S  +  + 
Sbjct: 1    MKMATTLQLTTDLSKP---IIVVKPSLEFASTPRHCRTSLSLPRFNNIARASSSSSDSSL 57

Query: 216  LSRRQLVSQAATFSLT----PLVVVFDLPAKSEE-ALSDWERVYLPIDPGVVLLDISFVP 380
            +SRR  VS+ A  SLT    PL      PAKSEE ALS+WE+V LPIDPGVVLLDI+FVP
Sbjct: 58   VSRRHFVSETAALSLTLTTLPLFGSIQ-PAKSEESALSEWEKVSLPIDPGVVLLDIAFVP 116

Query: 381  DDSNHGFLLGTRQTLLETKDGGNTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAI 560
            +D  HGFLLGTRQT+LETKDGG+TWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAI
Sbjct: 117  EDPKHGFLLGTRQTILETKDGGDTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAI 176

Query: 561  LLYTSDAGESWERIPLSNQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNRGYNWKAAIQE 740
            LL+TSD+G SWERIPLS+QLPGDMVYIKATGEKSAEMVTDEGAIY+TSNRGYNWKAA+QE
Sbjct: 177  LLHTSDSGNSWERIPLSSQLPGDMVYIKATGEKSAEMVTDEGAIYITSNRGYNWKAAVQE 236

Query: 741  TVSATLNRTVSSGISGASYYTGTFNTVNRSPDGNYVAVSSRGNFYLTWEPGQPYWQPHNR 920
            TVSATLNRTVSSGISGASYYTGTFN+VNRSPDGNYVAVSSRGNFYLTWEPGQP+WQPHNR
Sbjct: 237  TVSATLNRTVSSGISGASYYTGTFNSVNRSPDGNYVAVSSRGNFYLTWEPGQPFWQPHNR 296

Query: 921  AVARRIQNMGWRADXXXXXXXXXXXXXXSKGKGITEEFEEVPVQSRGFGILDVGYRSQAE 1100
             VARRIQNMGWRAD              SKG G+TEEFEEVPVQSRGFGILDVGYRS+ E
Sbjct: 297  TVARRIQNMGWRADGGLWLLVRGGGLYLSKGTGLTEEFEEVPVQSRGFGILDVGYRSKDE 356

Query: 1101 AWAAGGSGILLRTTNGGKTWTRDKAADNIAANLYSVKFINDRKGFVLGNDGVLLRYLG 1274
            AWAAGGSGILLRTTNGGKTWTRDKAADNIAANLYSVKFI+D  GFVLGNDGVLLRYLG
Sbjct: 357  AWAAGGSGILLRTTNGGKTWTRDKAADNIAANLYSVKFIDDSTGFVLGNDGVLLRYLG 414


>ref|XP_004505712.1| PREDICTED: LOW QUALITY PROTEIN: photosystem II stability/assembly
            factor HCF136, chloroplastic-like [Cicer arietinum]
          Length = 391

 Score =  601 bits (1550), Expect = e-169
 Identities = 313/403 (77%), Positives = 332/403 (82%), Gaps = 4/403 (0%)
 Frame = +3

Query: 78   MATLQLTDYSNPSTTALRLKPSLTSVFSTNSHRQCKPHSRFTPKASL----SRRQLVSQA 245
            MATLQ T     S+T  +  P L S    +S  +      F  KASL    +RRQ +++ 
Sbjct: 1    MATLQFT--FTDSSTFCKPLPQLPSKSVLHSRTRS-----FVVKASLELSRTRRQFIAET 53

Query: 246  ATFSLTPLVVVFDLPAKSEEALSDWERVYLPIDPGVVLLDISFVPDDSNHGFLLGTRQTL 425
               S    V+V    AKSEE LSD  RVYLPIDPGVVLLDI+FVPDD NHGFLLGTRQTL
Sbjct: 54   TAIS----VLVPSQLAKSEETLSDX-RVYLPIDPGVVLLDIAFVPDDPNHGFLLGTRQTL 108

Query: 426  LETKDGGNTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWERIP 605
            LETKDGGNTW PRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAG+SWERIP
Sbjct: 109  LETKDGGNTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGDSWERIP 168

Query: 606  LSNQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNRGYNWKAAIQETVSATLNRTVSSGIS 785
            LS +LPGDMVYIKATGEK AEMVTDEGAIYVTSNRGYNW+AA+QE+VSATLNRTVSSGIS
Sbjct: 169  LSAELPGDMVYIKATGEKGAEMVTDEGAIYVTSNRGYNWRAAVQESVSATLNRTVSSGIS 228

Query: 786  GASYYTGTFNTVNRSPDGNYVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQNMGWRADX 965
            GASYYTGTFNTVNRSPDG YVAVSSRGNFYLTWEPGQ YWQPHNRAVARRIQNMGWRAD 
Sbjct: 229  GASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQAYWQPHNRAVARRIQNMGWRADG 288

Query: 966  XXXXXXXXXXXXXSKGKGITEEFEEVPVQSRGFGILDVGYRSQAEAWAAGGSGILLRTTN 1145
                         SKG GITEEFEEVPVQSRGFGILDVGYRS  EAWAAGGSG+LLRT N
Sbjct: 289  GLWLLVRGGGLYLSKGTGITEEFEEVPVQSRGFGILDVGYRSTEEAWAAGGSGVLLRTNN 348

Query: 1146 GGKTWTRDKAADNIAANLYSVKFINDRKGFVLGNDGVLLRYLG 1274
            GGK+W RDKAADNIAANLYSVKFI+D+KGFVLGNDGVLLRYLG
Sbjct: 349  GGKSWIRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG 391


>ref|XP_006394580.1| hypothetical protein EUTSA_v10004338mg [Eutrema salsugineum]
            gi|557091219|gb|ESQ31866.1| hypothetical protein
            EUTSA_v10004338mg [Eutrema salsugineum]
          Length = 404

 Score =  599 bits (1545), Expect = e-169
 Identities = 306/411 (74%), Positives = 342/411 (83%), Gaps = 12/411 (2%)
 Frame = +3

Query: 78   MATLQLTDYSNPSTTALRLKPSLTSVFSTN--SHRQC--------KPHSRFTPKASLSRR 227
            MA+LQL D        L  KPS++  F  N  SHR           P S  +   SL+RR
Sbjct: 1    MASLQLCD------GYLLFKPSVSPRFLPNRISHRLIPKASASSPSPSSSSSSSLSLNRR 54

Query: 228  QLVSQAATFSLTPLVVVFD--LPAKSEEALSDWERVYLPIDPGVVLLDISFVPDDSNHGF 401
            QL+ Q+A  SL+ L  +F     AK++E LS+WERV+LPIDPGVVLLDI+FVPDD + GF
Sbjct: 55   QLLYQSAAVSLS-LSSIFGPVKEAKADEQLSEWERVFLPIDPGVVLLDIAFVPDDPSRGF 113

Query: 402  LLGTRQTLLETKDGGNTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDA 581
            LLGTRQTLLETKDGGNTW PRSIPSAE+EDFNYRFNSISFKGKEGWI+GKPAILLYT+DA
Sbjct: 114  LLGTRQTLLETKDGGNTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIIGKPAILLYTADA 173

Query: 582  GESWERIPLSNQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNRGYNWKAAIQETVSATLN 761
            GE+W+RIPLS+QLPGDMV+I+ATG+KSAEMVTDEGAIYVTSN+GYNWKAAIQETVSATLN
Sbjct: 174  GENWDRIPLSSQLPGDMVFIEATGDKSAEMVTDEGAIYVTSNKGYNWKAAIQETVSATLN 233

Query: 762  RTVSSGISGASYYTGTFNTVNRSPDGNYVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQ 941
            RTVSSGISGASYYTGTF+ VNRSPDG YVAVSSRGNF+LTWEPGQPYWQPHNRAVARRIQ
Sbjct: 234  RTVSSGISGASYYTGTFSAVNRSPDGKYVAVSSRGNFFLTWEPGQPYWQPHNRAVARRIQ 293

Query: 942  NMGWRADXXXXXXXXXXXXXXSKGKGITEEFEEVPVQSRGFGILDVGYRSQAEAWAAGGS 1121
            NMGWRAD              SKG GI+EEF+EVPVQSRGFGILDVGYRS+ EAWAAGGS
Sbjct: 294  NMGWRADGGLWLLVRGGGLYLSKGTGISEEFDEVPVQSRGFGILDVGYRSEEEAWAAGGS 353

Query: 1122 GILLRTTNGGKTWTRDKAADNIAANLYSVKFINDRKGFVLGNDGVLLRYLG 1274
            GILLRT NGGK+W RDKAADNIAANLY+VKF++D+KGFVLGNDGVLLRY+G
Sbjct: 354  GILLRTRNGGKSWNRDKAADNIAANLYAVKFVDDKKGFVLGNDGVLLRYVG 404


>ref|XP_004966550.1| PREDICTED: photosystem II stability/assembly factor HCF136,
            chloroplastic-like [Setaria italica]
          Length = 395

 Score =  597 bits (1540), Expect = e-168
 Identities = 295/365 (80%), Positives = 317/365 (86%), Gaps = 3/365 (0%)
 Frame = +3

Query: 189  HSRFTPKASLSRRQLVSQAATFSLTPLVVVFDLP---AKSEEALSDWERVYLPIDPGVVL 359
            HS   P A   RR +   AA  ++ PLV+    P   A    ALS+WERV+LPIDPGVVL
Sbjct: 31   HSNSDPTAVDRRRFIAHTAAAAAVAPLVLPRWTPTARADDAPALSEWERVFLPIDPGVVL 90

Query: 360  LDISFVPDDSNHGFLLGTRQTLLETKDGGNTWVPRSIPSAEDEDFNYRFNSISFKGKEGW 539
            LDI+FVPDD +HGFLLGTRQT+LETKDGGNTW PRSIPSAEDEDFNYRFNS+SFKGKEGW
Sbjct: 91   LDIAFVPDDPSHGFLLGTRQTILETKDGGNTWFPRSIPSAEDEDFNYRFNSVSFKGKEGW 150

Query: 540  IVGKPAILLYTSDAGESWERIPLSNQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNRGYN 719
            I+GKPAILL+TS+AGESWERIPLS QLPG+MVYIKATGE+SAEMVTDEGAIYVTSNRGYN
Sbjct: 151  IIGKPAILLHTSNAGESWERIPLSAQLPGNMVYIKATGEQSAEMVTDEGAIYVTSNRGYN 210

Query: 720  WKAAIQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGNYVAVSSRGNFYLTWEPGQP 899
            WKAA+QETVSATLNRTVSSGISGASYYTGTFNTVNRSPDG YVAVSSRGNFYLTWEPGQP
Sbjct: 211  WKAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQP 270

Query: 900  YWQPHNRAVARRIQNMGWRADXXXXXXXXXXXXXXSKGKGITEEFEEVPVQSRGFGILDV 1079
            +WQPHNRAVARRIQNMGWRAD              SKG GITE+FEEV VQSRGFGILDV
Sbjct: 271  FWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLFLSKGTGITEDFEEVQVQSRGFGILDV 330

Query: 1080 GYRSQAEAWAAGGSGILLRTTNGGKTWTRDKAADNIAANLYSVKFINDRKGFVLGNDGVL 1259
            GYRSQ EAWAAGGSG+LL+TTNGGK W RDKAADNIAANLYSVKF++DRKGFVLGNDGVL
Sbjct: 331  GYRSQDEAWAAGGSGVLLKTTNGGKNWVRDKAADNIAANLYSVKFLDDRKGFVLGNDGVL 390

Query: 1260 LRYLG 1274
            LRYLG
Sbjct: 391  LRYLG 395


>ref|XP_002439075.1| hypothetical protein SORBIDRAFT_10g031120 [Sorghum bicolor]
            gi|241917298|gb|EER90442.1| hypothetical protein
            SORBIDRAFT_10g031120 [Sorghum bicolor]
          Length = 397

 Score =  597 bits (1540), Expect = e-168
 Identities = 296/368 (80%), Positives = 323/368 (87%), Gaps = 6/368 (1%)
 Frame = +3

Query: 189  HSRFTPK--ASLSRRQLVSQ-AATFSLTPLVVVFDLPAKSEE---ALSDWERVYLPIDPG 350
            HS  TP   AS+ RR+ ++  AA  +++PLV+    PA   +   ALS+WERV+LPIDPG
Sbjct: 30   HSESTPPGAASVDRRRFIAHTAAAAAVSPLVLPRWTPAARADGAPALSEWERVFLPIDPG 89

Query: 351  VVLLDISFVPDDSNHGFLLGTRQTLLETKDGGNTWVPRSIPSAEDEDFNYRFNSISFKGK 530
            VVLLDI+FVPDD +HGFLLGTRQT+LETKDGGNTW PRSIPSAEDEDFNYRFNS+SFKGK
Sbjct: 90   VVLLDIAFVPDDPSHGFLLGTRQTILETKDGGNTWFPRSIPSAEDEDFNYRFNSVSFKGK 149

Query: 531  EGWIVGKPAILLYTSDAGESWERIPLSNQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNR 710
            EGWI+GKPAILL+TSDAGESWERIPLS QLPG+MVYIKATGE+SAEMVTDEGAIYVTSNR
Sbjct: 150  EGWIIGKPAILLHTSDAGESWERIPLSAQLPGNMVYIKATGEQSAEMVTDEGAIYVTSNR 209

Query: 711  GYNWKAAIQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGNYVAVSSRGNFYLTWEP 890
            GYNWKAA+QETVSATLNRTVSSGISGASYYTGTFNTVNRSPDG YVAVSSRGNFYLTWEP
Sbjct: 210  GYNWKAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEP 269

Query: 891  GQPYWQPHNRAVARRIQNMGWRADXXXXXXXXXXXXXXSKGKGITEEFEEVPVQSRGFGI 1070
            GQP+WQPHNRAVARRIQNMGWRAD              SKG GI+E+FEEV VQSRGFGI
Sbjct: 270  GQPFWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLFLSKGTGISEDFEEVQVQSRGFGI 329

Query: 1071 LDVGYRSQAEAWAAGGSGILLRTTNGGKTWTRDKAADNIAANLYSVKFINDRKGFVLGND 1250
            LDVGYRSQ EAWAAGGSG+LL+TTNGGK W RDKAADNIAANLYSVKF++D KGFVLGND
Sbjct: 330  LDVGYRSQEEAWAAGGSGVLLKTTNGGKNWVRDKAADNIAANLYSVKFLDDSKGFVLGND 389

Query: 1251 GVLLRYLG 1274
            GVLLRYLG
Sbjct: 390  GVLLRYLG 397


>ref|NP_197703.1| photosystem II stability/assembly factor HCF136 [Arabidopsis
            thaliana] gi|6016183|sp|O82660.1|P2SAF_ARATH RecName:
            Full=Photosystem II stability/assembly factor HCF136,
            chloroplastic; Flags: Precursor
            gi|3559807|emb|CAA75723.1| HCF136 protein [Arabidopsis
            thaliana] gi|9759370|dbj|BAB09829.1| photosystem II
            stability/assembly factor HCF136 [Arabidopsis thaliana]
            gi|15010780|gb|AAK74049.1| AT5g23120/MYJ24_11
            [Arabidopsis thaliana] gi|28416529|gb|AAO42795.1|
            At5g23120/MYJ24_11 [Arabidopsis thaliana]
            gi|332005741|gb|AED93124.1| photosystem II
            stability/assembly factor HCF136 [Arabidopsis thaliana]
          Length = 403

 Score =  595 bits (1534), Expect = e-167
 Identities = 304/411 (73%), Positives = 340/411 (82%), Gaps = 12/411 (2%)
 Frame = +3

Query: 78   MATLQLTDYSNPSTTALRLKPSLTSVFSTN--SHRQCKPHSRFTPKA----------SLS 221
            MA+LQL D        L  KPS++  F +   SHR     S   P +          S S
Sbjct: 1    MASLQLCD------GYLLFKPSVSPRFLSQRISHRLIPKASSSPPPSPSPSSSSSSLSFS 54

Query: 222  RRQLVSQAATFSLTPLVVVFDLPAKSEEALSDWERVYLPIDPGVVLLDISFVPDDSNHGF 401
            RR+L+ Q+A  SL+   +V   PA+++E LS+WERV+LPIDPGVVLLDI+FVPD+ + GF
Sbjct: 55   RRELLYQSAAVSLSLSSIVG--PARADEQLSEWERVFLPIDPGVVLLDIAFVPDEPSRGF 112

Query: 402  LLGTRQTLLETKDGGNTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDA 581
            LLGTRQTLLETKDGG+TW PRSIPSAE+EDFNYRFNSISFKGKEGWI+GKPAILLYT+DA
Sbjct: 113  LLGTRQTLLETKDGGSTWNPRSIPSAEEEDFNYRFNSISFKGKEGWIIGKPAILLYTADA 172

Query: 582  GESWERIPLSNQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNRGYNWKAAIQETVSATLN 761
            GE+W+RIPLS+QLPGDMV+IKAT +KSAEMVTDEGAIYVTSNRGYNWKAAIQETVSATLN
Sbjct: 173  GENWDRIPLSSQLPGDMVFIKATEDKSAEMVTDEGAIYVTSNRGYNWKAAIQETVSATLN 232

Query: 762  RTVSSGISGASYYTGTFNTVNRSPDGNYVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQ 941
            RTVSSGISGASYYTGTF+ VNRSPDG YVAVSSRGNF+LTWEPGQPYWQPHNRAVARRIQ
Sbjct: 233  RTVSSGISGASYYTGTFSAVNRSPDGRYVAVSSRGNFFLTWEPGQPYWQPHNRAVARRIQ 292

Query: 942  NMGWRADXXXXXXXXXXXXXXSKGKGITEEFEEVPVQSRGFGILDVGYRSQAEAWAAGGS 1121
            NMGWRAD              SKG GITEEFEEVPVQSRGFGILDVGYRS+ EAWAAGGS
Sbjct: 293  NMGWRADGGLWLLVRGGGLYLSKGTGITEEFEEVPVQSRGFGILDVGYRSEEEAWAAGGS 352

Query: 1122 GILLRTTNGGKTWTRDKAADNIAANLYSVKFINDRKGFVLGNDGVLLRYLG 1274
            GILLRT NGGK+W RDKAADNIAANLY+VKF++D+KGFVLGNDGVLLRY+G
Sbjct: 353  GILLRTRNGGKSWNRDKAADNIAANLYAVKFVDDKKGFVLGNDGVLLRYVG 403


>ref|XP_006354977.1| PREDICTED: photosystem II stability/assembly factor HCF136,
            chloroplastic-like [Solanum tuberosum]
          Length = 402

 Score =  593 bits (1530), Expect = e-167
 Identities = 299/382 (78%), Positives = 332/382 (86%), Gaps = 11/382 (2%)
 Frame = +3

Query: 162  TNSHRQCKPHSRFTPK------ASLSRRQLVSQ-AATFSLTPLVVVFDLP---AKSEEA- 308
            T + R   PH+ F P+      A+++RRQL+++ AA  +L PL+ V   P   AK+EE  
Sbjct: 22   TTTPRPLLPHN-FPPRLPLCRAANINRRQLIAETAAAIALPPLLGVSLSPIPVAKAEETP 80

Query: 309  LSDWERVYLPIDPGVVLLDISFVPDDSNHGFLLGTRQTLLETKDGGNTWVPRSIPSAEDE 488
            LS+WERV+LPI+PGVVLLDI+FVPDD NHGF+LGTRQT+LETKDGG TWVPRSI SAE+E
Sbjct: 81   LSEWERVFLPINPGVVLLDIAFVPDDPNHGFVLGTRQTILETKDGGTTWVPRSIASAEEE 140

Query: 489  DFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWERIPLSNQLPGDMVYIKATGEKSAE 668
            DFNYRFNSISFKGKEGWI+GKPAILL+TSDAGE+WERIPLS+QLPGDMVYIKATGE+SAE
Sbjct: 141  DFNYRFNSISFKGKEGWIIGKPAILLHTSDAGENWERIPLSSQLPGDMVYIKATGEQSAE 200

Query: 669  MVTDEGAIYVTSNRGYNWKAAIQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGNYV 848
            MVTDEGAIY+TSN+GYNWKAAIQETVSATLNRTVSSGISGASYYTGTF+TVNRSPDG YV
Sbjct: 201  MVTDEGAIYITSNKGYNWKAAIQETVSATLNRTVSSGISGASYYTGTFSTVNRSPDGRYV 260

Query: 849  AVSSRGNFYLTWEPGQPYWQPHNRAVARRIQNMGWRADXXXXXXXXXXXXXXSKGKGITE 1028
            AVSSRGNFYLTWEPGQ YWQPHNRAVARRIQ+MGWRAD              SKG G+TE
Sbjct: 261  AVSSRGNFYLTWEPGQAYWQPHNRAVARRIQSMGWRADGGLWLLVRGGGLYLSKGTGLTE 320

Query: 1029 EFEEVPVQSRGFGILDVGYRSQAEAWAAGGSGILLRTTNGGKTWTRDKAADNIAANLYSV 1208
            +FEEV VQSRGFGILDVGYRSQ EAWAAGGSGILL+TTNGGKTW RDKAADNIAANLYSV
Sbjct: 321  DFEEVSVQSRGFGILDVGYRSQDEAWAAGGSGILLKTTNGGKTWIRDKAADNIAANLYSV 380

Query: 1209 KFINDRKGFVLGNDGVLLRYLG 1274
            KFIND +GFVLGNDGVLL+YLG
Sbjct: 381  KFINDNQGFVLGNDGVLLKYLG 402