BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00008906
         (365 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...   100   4e-19
gb|AAR13295.1| retrovirus-related pol polyprotein [Phaseolus vul...    99   8e-19
emb|CAN70013.1| hypothetical protein VITISV_017116 [Vitis vinifera]    75   7e-12
emb|CAN84102.1| hypothetical protein VITISV_041248 [Vitis vinifera]    75   9e-12
emb|CAN63293.1| hypothetical protein VITISV_025722 [Vitis vinifera]    75   9e-12
emb|CAN75921.1| hypothetical protein VITISV_030750 [Vitis vinifera]    74   2e-11
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...    74   2e-11
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc...    71   1e-10
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]                70   4e-10
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]                 70   4e-10
gb|ABA93547.1| retrotransposon protein, putative, Ty1-copia subc...    69   7e-10
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]      69   9e-10
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...    69   9e-10
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]         68   1e-09
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]                   68   1e-09
emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera]    68   1e-09
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]      68   2e-09
gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-...    67   3e-09
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707...    66   6e-09
gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subc...    66   6e-09

>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score = 99.8 bits (247), Expect = 4e-19
 Identities = 57/122 (46%), Positives = 72/122 (59%), Gaps = 6/122 (4%)
 Frame = +2

Query: 17  RKPVKSNERGRSCSKLRGEISRRRPAKDECAYCHQKRHWKKDYPKKDKS-----NANMVQ 181
           R+  ++ ER R  SK +G    R  AKDECA+CH+K HWKKD PK  K      +AN+ +
Sbjct: 147 RQQSQTKER-RGMSKSKG----RAVAKDECAFCHEKGHWKKDCPKLQKKEKVLQDANVAE 201

Query: 182 KTKD-EDDLAFSVSPANNLSTNNLSDIWFLDFTCSYHMCPDCEWFSSFKETDGGVVLMGK 358
              D E D++  VS    LS +   D W LD  C+YHMCP  +WF  F+E DGGVV MG 
Sbjct: 202 CKSDVESDISLIVS----LSASLYLDEWILDSGCTYHMCPIRDWFFEFQELDGGVVYMGN 257

Query: 359 DN 364
           DN
Sbjct: 258 DN 259


>gb|AAR13295.1| retrovirus-related pol polyprotein [Phaseolus vulgaris]
          Length = 324

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 54/118 (45%), Positives = 70/118 (59%), Gaps = 6/118 (5%)
 Frame = +2

Query: 29  KSNERGRSCSKLRGEISRRRPAKDECAYCHQKRHWKKDYPKKDKS-----NANMVQKTKD 193
           ++ ER   C K +G +     AKDECA+CH+K HWKKD PK  K      +AN+ +   D
Sbjct: 190 QTKERRGMC-KSKGRVV----AKDECAFCHEKGHWKKDCPKLQKKEKVPQDANVAECKSD 244

Query: 194 -EDDLAFSVSPANNLSTNNLSDIWFLDFTCSYHMCPDCEWFSSFKETDGGVVLMGKDN 364
            E D++  VS    LS ++  D W LD  C+YHMCP  +WF  F+E DGGVV MG DN
Sbjct: 245 VESDISLIVS----LSASSYPDEWILDSGCTYHMCPIRDWFFEFQELDGGVVYMGNDN 298


>emb|CAN70013.1| hypothetical protein VITISV_017116 [Vitis vinifera]
          Length = 947

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 39/114 (34%), Positives = 64/114 (56%), Gaps = 5/114 (4%)
 Frame = +2

Query: 35  NERGRSCSKLRGEISRRRPAKDECAYCHQKRHWKKDYPKKDKSNANMVQKTKDEDDLAFS 214
           ++R + C  L+ + S+    K +C  CH++ H+KKD   K +   N ++KT +E D A  
Sbjct: 249 DKREKKCKNLKAK-SKSNTKKFKCFICHKEGHFKKDCSDKRQ---NTIKKTVNEGDAAVI 304

Query: 215 VSPANNLSTNNLSDI-----WFLDFTCSYHMCPDCEWFSSFKETDGGVVLMGKD 361
           +   ++    N++++     W LD  CS+HMCP   WF  FKE +GG VL+G +
Sbjct: 305 LDGYDSAKVLNVAEMDSGKEWILDSGCSFHMCPIKAWFEDFKEANGGHVLLGNN 358


>emb|CAN84102.1| hypothetical protein VITISV_041248 [Vitis vinifera]
          Length = 894

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 42/123 (34%), Positives = 62/123 (50%), Gaps = 5/123 (4%)
 Frame = +2

Query: 8   KNNRKPVKSNERGRSCSKLRGEISRRRPAKDECAYCHQKRHWKKDYPKKDKSNANMVQKT 187
           K   K   +N + RS SK +         K +C  CH++ H+KKD P   +   N  +KT
Sbjct: 205 KKREKKKGNNSKSRSKSKTK---------KFKCFICHKEGHFKKDCPDMRQ---NTXKKT 252

Query: 188 KDEDDLAFSVSPANNLSTNNLSDI-----WFLDFTCSYHMCPDCEWFSSFKETDGGVVLM 352
            +E D    +   +N    N++++     W LD  CS+HMCP   WF  FKE +GG VL+
Sbjct: 253 MNEGDATMILDGYDNAGVLNVAEVDSGKEWILDSGCSFHMCPIKAWFEDFKEANGGHVLL 312

Query: 353 GKD 361
           G +
Sbjct: 313 GNN 315


>emb|CAN63293.1| hypothetical protein VITISV_025722 [Vitis vinifera]
          Length = 347

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 12/130 (9%)
 Frame = +2

Query: 8   KNNRKPVKSNERGRSCSKLRGEISRRRPAKDECAYCHQKRHWKKDYPKKDK--------- 160
           +N  +   SN + RS SK R +I        +C  C +K H K+D P+K K         
Sbjct: 99  RNKFRSESSNNKSRSKSKKRKDI--------QCYKCGKKGHMKRDCPEKKKRGSVSENKE 150

Query: 161 ---SNANMVQKTKDEDDLAFSVSPANNLSTNNLSDIWFLDFTCSYHMCPDCEWFSSFKET 331
               +AN+V +   E      +S ++  S+++L+D W LD TCSYHM P+ +WF++++  
Sbjct: 151 GSSKSANVVTEEDSESGDGDMLSVSS--SSDHLTDSWILDSTCSYHMTPNKDWFNTYRSV 208

Query: 332 DGGVVLMGKD 361
           + G +LMG D
Sbjct: 209 NSGSILMGSD 218


>emb|CAN75921.1| hypothetical protein VITISV_030750 [Vitis vinifera]
          Length = 437

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 42/125 (33%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
 Frame = +2

Query: 2   GRKNNRKPVKSNERGRSCSKLRGEISRRRPAKDECAYCHQKRHWKKDYPKKDKSNANMVQ 181
           GR + R+    N + R  SK R         K +C  CH++ H+ KD P + +   N V+
Sbjct: 39  GRFDKREKKGKNSKARLKSKTR---------KFKCFICHKEGHFNKDCPNRRQ---NTVK 86

Query: 182 KTKDEDDLAFSVSPANNLSTNNLSDI-----WFLDFTCSYHMCPDCEWFSSFKETDGGVV 346
           K  +E D    +   ++    N++++     W LD  CS+HMCP   WF +FKE DGG V
Sbjct: 87  KIVNEGDAVVILDGYDSAELLNMTEVDSGKEWILDSGCSFHMCPIKAWFENFKEADGGHV 146

Query: 347 LMGKD 361
           L+G +
Sbjct: 147 LLGNN 151


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
           copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 41/119 (34%), Positives = 60/119 (50%), Gaps = 8/119 (6%)
 Frame = +2

Query: 32  SNERGR-SCSKLRGEISRRRPAKDECAYCHQKRHWKKDYPKKDK-------SNANMVQKT 187
           S+ +GR +  K    +S+     D C YC +K HWK D PKK K       S A   + T
Sbjct: 200 SSRKGRKNGGKKNKPMSKGAKPDDVCNYCKEKGHWKFDCPKKKKQSEKQSVSAAVAEEDT 259

Query: 188 KDEDDLAFSVSPANNLSTNNLSDIWFLDFTCSYHMCPDCEWFSSFKETDGGVVLMGKDN 364
             E+D+A            + SD+W LD   SYH+CP  EWF+++++ DGG + M   +
Sbjct: 260 NSEEDIALVAD-----EHTHHSDVWVLDSGASYHICPRREWFTTYEQVDGGSISMANSS 313


>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1138

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 42/132 (31%), Positives = 60/132 (45%), Gaps = 14/132 (10%)
 Frame = +2

Query: 8   KNNRKPVKSNERGRSCSKLRGEISRRRPAKDECAYCHQKRH-----WKKDYPKKDKSNAN 172
           +  +K  K+  R +S S  RG  S+ R     C YC +  H     WK     KDK    
Sbjct: 147 RQQKKNTKNQSRDKSSSSYRGR-SKSRGRYKSCKYCKRDGHDISECWKLQ--DKDKRTRK 203

Query: 173 MVQKTKDEDDLAFSVSPANNLSTNNL---------SDIWFLDFTCSYHMCPDCEWFSSFK 325
            + K K E++   ++          L         SD W LD  C+YHMCP+ +WF++++
Sbjct: 204 YIPKGKKEEEGKAAIVTDEKSDAELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYE 263

Query: 326 ETDGGVVLMGKD 361
              GG VLMG D
Sbjct: 264 AVQGGTVLMGDD 275


>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
          Length = 1037

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 43/128 (33%), Positives = 57/128 (44%), Gaps = 14/128 (10%)
 Frame = +2

Query: 20  KPVKSNERGRSCSKLRGEISRRRPAKDECAYCHQKRH-----WKKDYPKKDKSNANMVQK 184
           K   +  R +S S  RG  S+ R     C YC +  H     WK     KDK     + K
Sbjct: 26  KNTNNKSRDKSSSSYRGR-SKSRGRYKSCKYCKRDGHDISKCWKLQ--DKDKRTGKYIPK 82

Query: 185 TKDEDDLAFSVSPANNLSTNNL---------SDIWFLDFTCSYHMCPDCEWFSSFKETDG 337
            K ED+   +V          L         SD W LD  C+YHMCP+ +WF++++   G
Sbjct: 83  GKKEDEGKAAVVTDEKSDAELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYEVVQG 142

Query: 338 GVVLMGKD 361
           G VLMG D
Sbjct: 143 GTVLMGDD 150


>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
          Length = 1205

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 43/128 (33%), Positives = 57/128 (44%), Gaps = 14/128 (10%)
 Frame = +2

Query: 20  KPVKSNERGRSCSKLRGEISRRRPAKDECAYCHQKRH-----WKKDYPKKDKSNANMVQK 184
           K   +  R +S S  RG  S+ R     C YC +  H     WK     KDK     + K
Sbjct: 194 KNTNNKSRDKSSSSYRGR-SKSRGRYKSCKYCKRDGHDISKCWKLQ--DKDKRTGKYIPK 250

Query: 185 TKDEDDLAFSVSPANNLSTNNL---------SDIWFLDFTCSYHMCPDCEWFSSFKETDG 337
            K ED+   +V          L         SD W LD  C+YHMCP+ +WF++++   G
Sbjct: 251 GKKEDEGKAAVVTDEKSDAELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYEVVQG 310

Query: 338 GVVLMGKD 361
           G VLMG D
Sbjct: 311 GTVLMGDD 318


>gb|ABA93547.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 546

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 43/128 (33%), Positives = 57/128 (44%), Gaps = 14/128 (10%)
 Frame = +2

Query: 20  KPVKSNERGRSCSKLRGEISRRRPAKDECAYCHQKRH-----WKKDYPKKDKSNANMVQK 184
           K  K+  R +S S  RG  S+ R     C YC +  H     WK     KDK     + K
Sbjct: 26  KNTKNQSRDKSSSSYRGR-SKSRGRYRSCKYCKRDGHDISECWKLQ--DKDKRTGKYIPK 82

Query: 185 TKDEDDLAFSVSPANNLSTNNL---------SDIWFLDFTCSYHMCPDCEWFSSFKETDG 337
            K E++   +V          L         SD W LD  C+YHMCP+ +WF +++   G
Sbjct: 83  GKKEEEGKAAVVTDEKSDAELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFVTYEAVQG 142

Query: 338 GVVLMGKD 361
           G VLMG D
Sbjct: 143 GTVLMGDD 150


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 43/132 (32%), Positives = 59/132 (44%), Gaps = 14/132 (10%)
 Frame = +2

Query: 8   KNNRKPVKSNERGRSCSKLRGEISRRRPAKDECAYCHQKRH-----WKKDYPKKDKSNAN 172
           +   K  K+  R +S S  RG  S+ R     C YC +  H     WK     KDK    
Sbjct: 240 RQQEKNTKNQSRDKSSSSYRGR-SKSRGRYKSCKYCKRDGHDISECWKLQ--DKDKRTGK 296

Query: 173 MVQKTKDEDDLAFSVSPANNLSTNNL---------SDIWFLDFTCSYHMCPDCEWFSSFK 325
            + K K E++   +V       T  L         SD W LD   +YHMCP+ +WF++++
Sbjct: 297 YIPKGKKEEEGKAAVVTDEKSDTELLVAYAGCAQTSDQWILDTAWTYHMCPNRDWFATYE 356

Query: 326 ETDGGVVLMGKD 361
              GG VLMG D
Sbjct: 357 ALQGGTVLMGDD 368


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1312

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 43/132 (32%), Positives = 59/132 (44%), Gaps = 14/132 (10%)
 Frame = +2

Query: 8   KNNRKPVKSNERGRSCSKLRGEISRRRPAKDECAYCHQKRH-----WKKDYPKKDKSNAN 172
           +   K  K+  R +S S  RG  S+ R     C YC +  H     WK     KDK    
Sbjct: 240 RQQEKNTKNQSRDKSSSSYRGR-SKSRGRYKSCKYCKRDGHDISECWKLQ--DKDKRTGK 296

Query: 173 MVQKTKDEDDLAFSVSPANNLSTNNL---------SDIWFLDFTCSYHMCPDCEWFSSFK 325
            + K K E++   +V       T  L         SD W LD   +YHMCP+ +WF++++
Sbjct: 297 YIPKGKKEEEGKAAVVTDEKSDTELLVAYAGCAQTSDQWILDTAWTYHMCPNRDWFATYE 356

Query: 326 ETDGGVVLMGKD 361
              GG VLMG D
Sbjct: 357 ALQGGTVLMGDD 368


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 42/128 (32%), Positives = 57/128 (44%), Gaps = 14/128 (10%)
 Frame = +2

Query: 20  KPVKSNERGRSCSKLRGEISRRRPAKDECAYCHQKRH-----WKKDYPKKDKSNANMVQK 184
           K   +  R +S S  RG  S+ R     C YC +  H     WK     KDK     + K
Sbjct: 209 KNTNNKSRDKSSSSYRGR-SKSRGRYKSCKYCKRDGHDISKCWKLQ--DKDKRTGKYIPK 265

Query: 185 TKDEDDLAFSVSPANNLSTNNL---------SDIWFLDFTCSYHMCPDCEWFSSFKETDG 337
            K E++   +V          L         SD W LD  C+YHMCP+ +WF++++   G
Sbjct: 266 GKKEEEGKAAVVTDEKSDAELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYEVVQG 325

Query: 338 GVVLMGKD 361
           G VLMG D
Sbjct: 326 GTVLMGDD 333


>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
          Length = 1305

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 9/121 (7%)
 Frame = +2

Query: 29  KSNERGRSCSKLRGEISRRRPAKDECAYCHQKRHWKKDYPKKDKS---------NANMVQ 181
           +S ERG S S+  G  + RR    +C  C ++ H KKD     KS         +   V 
Sbjct: 205 RSTERGPSGSQNHGRSTSRRKTNLKCYNCGKRGHLKKDCWSNKKSGEKSSEASTSQGCVA 264

Query: 182 KTKDEDDLAFSVSPANNLSTNNLSDIWFLDFTCSYHMCPDCEWFSSFKETDGGVVLMGKD 361
            T D+ ++ +S +  +    N L+D+W +D   ++HM P  +WF +++    G V MG D
Sbjct: 265 STSDDGEVLYSEAAVSTKGKNRLTDVWIVDSGATWHMTPRRDWFCTYEPVSEGNVFMGND 324

Query: 362 N 364
           +
Sbjct: 325 H 325


>emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera]
          Length = 344

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 43/123 (34%), Positives = 63/123 (51%), Gaps = 6/123 (4%)
 Frame = +2

Query: 5   RKNNRKPVKSNERGRSCSKLRGEISRRRPAKDECAYCHQKRHWKKDYP-KKDKSNANMVQ 181
           +KNN +      RGRS SK RG         ++C  C ++ H+ K+ P +K K N    +
Sbjct: 162 KKNNGR------RGRSRSKSRGN--------NKCFKCKKEGHYVKNXPDRKGKEN----K 203

Query: 182 KTKDEDDLAFSVSPANN-----LSTNNLSDIWFLDFTCSYHMCPDCEWFSSFKETDGGVV 346
           +  +  D  F+   +N      +   N  D W LD  CSYHM P+ +WFS+++  DGG V
Sbjct: 204 RNYNSGDATFAKENSNTTDVLLVXVTNSDDEWILDSGCSYHMSPNGDWFSTYQPIDGGKV 263

Query: 347 LMG 355
           LMG
Sbjct: 264 LMG 266


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 42/132 (31%), Positives = 58/132 (43%), Gaps = 14/132 (10%)
 Frame = +2

Query: 8   KNNRKPVKSNERGRSCSKLRGEISRRRPAKDECAYCHQKRH-----WKKDYPKKDKSNAN 172
           +   K   +  R +S S  RG  S+ R     C YC +  H     WK     KDK    
Sbjct: 114 RQQEKNTNNKSRDKSSSIYRGR-SKSRGRYKSCKYCKRDGHDISECWKLQ--DKDKRTRK 170

Query: 173 MVQKTKDEDDLAFSVSPANNLSTNNL---------SDIWFLDFTCSYHMCPDCEWFSSFK 325
            + K K E++   +V          L         SD W LD  C+YHMCP+ +WF++++
Sbjct: 171 YIPKGKKEEEGKAAVVTDEKSDAELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYE 230

Query: 326 ETDGGVVLMGKD 361
              GG VLMG D
Sbjct: 231 AVQGGTVLMGDD 242


>gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77549746|gb|ABA92543.1|
           retrotransposon protein, putative, Ty1-copia subclass,
           expressed [Oryza sativa Japonica Group]
          Length = 1170

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 42/132 (31%), Positives = 58/132 (43%), Gaps = 14/132 (10%)
 Frame = +2

Query: 8   KNNRKPVKSNERGRSCSKLRGEISRRRPAKDECAYCHQKRH-----WKKDYPKKDKSNAN 172
           +   K  K+  R +S S  RG  S+ R     C YC +        WK     KDK    
Sbjct: 157 RQQEKNRKNQSRDKSSSSYRGR-SKSRGNYKSCKYCKRDGRDISECWKLQ--DKDKRTEK 213

Query: 173 MVQKTKDEDDLAFSVSPANNLSTNNL---------SDIWFLDFTCSYHMCPDCEWFSSFK 325
            + K K E++   +V          L         SD W LD  C+YHMCP+ +WF++++
Sbjct: 214 YISKGKKEEEGKAAVVTDEKSDAELLVAYADCAQTSDQWILDTACTYHMCPNRDWFATYE 273

Query: 326 ETDGGVVLMGKD 361
              GG VLMG D
Sbjct: 274 AVQGGTVLMGDD 285


>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
          Length = 1773

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 42/130 (32%), Positives = 58/130 (44%), Gaps = 14/130 (10%)
 Frame = +2

Query: 8   KNNRKPVKSNERGRSCSKLRGEISRRRPAKDECAYCHQKRH-----WKKDYPKKDKSNAN 172
           +   K   +  R +S S  RG  S+ R     C YC +  H     WK     K+K   N
Sbjct: 147 RQQEKNTDNKSRDKSSSGYRGR-SKSRGRYKSCKYCKRGGHDISDCWKLQ--NKEKHKGN 203

Query: 173 MVQKTKDEDDLAFSVSPANNLSTNNL---------SDIWFLDFTCSYHMCPDCEWFSSFK 325
              K K E+    +V+  N      L         SD W LD  C+YHMCP+ +WF++++
Sbjct: 204 YKPKGKQEEQGKAAVATDNKPDAELLVAYAGCVQTSDEWLLDTGCTYHMCPNRDWFTTYE 263

Query: 326 ETDGGVVLMG 355
              GG VLMG
Sbjct: 264 PVQGGNVLMG 273


>gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1262

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 42/134 (31%), Positives = 57/134 (42%), Gaps = 14/134 (10%)
 Frame = +2

Query: 2   GRKNNRKPVKSNERGRSCSKLRGEISRRRPAKDECAYCHQKRH-----WKKDYPKKDKSN 166
           G +   K   S  R +S S   G  S+ R     C YC +  +     WK     KDK  
Sbjct: 257 GNRQQEKNTNSKSRDKSSSSYHGR-SKSRGRYKSCKYCKRDGYDISKCWKLQ--DKDKRT 313

Query: 167 ANMVQKTKDEDDLAFSVSPANNLSTNNL---------SDIWFLDFTCSYHMCPDCEWFSS 319
              V K K E++   +V          L         SD W LD  C+YHMC + +WF++
Sbjct: 314 GKYVPKGKKEEEGKAAVVTDEKSDAKLLVAYAGCAQTSDQWILDTACTYHMCSNRDWFAT 373

Query: 320 FKETDGGVVLMGKD 361
           ++   GG VLMG D
Sbjct: 374 YEAVQGGTVLMGDD 387