BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00008549
         (1490 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37506.3| unnamed protein product [Vitis vinifera]              635   e-179
ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcr...   630   e-178
ref|XP_006483466.1| PREDICTED: RNA polymerase I-specific transcr...   616   e-174
ref|XP_006483561.1| PREDICTED: RNA polymerase I-specific transcr...   614   e-173
ref|XP_006483559.1| PREDICTED: RNA polymerase I-specific transcr...   614   e-173
gb|EXB36892.1| hypothetical protein L484_016497 [Morus notabilis]     583   e-164
ref|XP_004155826.1| PREDICTED: RNA polymerase I-specific transcr...   568   e-159
ref|XP_004133864.1| PREDICTED: RNA polymerase I-specific transcr...   568   e-159
ref|XP_007046443.1| Major facilitator superfamily protein isofor...   561   e-157
ref|XP_003547884.1| PREDICTED: RNA polymerase I-specific transcr...   545   e-152
ref|XP_003534228.1| PREDICTED: RNA polymerase I-specific transcr...   537   e-150
ref|XP_006483467.1| PREDICTED: RNA polymerase I-specific transcr...   531   e-148
ref|XP_006483560.1| PREDICTED: RNA polymerase I-specific transcr...   530   e-148
ref|XP_007134114.1| hypothetical protein PHAVU_010G020100g [Phas...   528   e-147
ref|XP_002524432.1| transcription initiation factor ia, putative...   524   e-146
ref|XP_004508346.1| PREDICTED: RNA polymerase I-specific transcr...   518   e-144
ref|XP_002307198.2| RNA polymerase 1 specific transcription init...   502   e-139
ref|XP_007204094.1| hypothetical protein PRUPE_ppa002914mg [Prun...   494   e-137
ref|XP_002881355.1| RNA polymerase I specific transcription init...   484   e-134
ref|NP_850236.1| RNA polymerase I specific transcription initiat...   479   e-132

>emb|CBI37506.3| unnamed protein product [Vitis vinifera]
          Length = 607

 Score =  635 bits (1639), Expect = e-179
 Identities = 339/502 (67%), Positives = 404/502 (80%), Gaps = 7/502 (1%)
 Frame = +1

Query: 4    MEDVNVSDLELVHLVRDALISDPR-ESDSYGQLVEVLHRKVNLTPDDVALIVTTLKALSG 180
            ME+VN SD ELV+ VR AL S P  +SDSY QL+ VLH K  L PD+VAL+VT+LKALSG
Sbjct: 15   MEEVNFSDSELVYHVRHALQSVPLGDSDSYDQLIGVLHHKERLAPDEVALLVTSLKALSG 74

Query: 181  AVSCIDIDRHESLLSAIFGMSMWSYGPDVSDALAELIVSLASSSGKFLVSCLEMLVGHFI 360
            AVSCID+  H+SLLS+IFGMS+W+YGPDV DAL ELI+SLA+SSG +L   L+MLV +F+
Sbjct: 75   AVSCIDMVHHKSLLSSIFGMSLWNYGPDVMDALLELILSLAASSGNYLDCSLDMLVSNFM 134

Query: 361  PPKNVQDLLKQSRGLARKDRVLSQVHSALKDISDLVPLAPDKLCPIVLGRMPKMSQKEPL 540
            PP ++ D LKQ RGLARKD+VLS+VHS LKDI+DLVPLAP +L PIV+ RMP +  KEPL
Sbjct: 135  PPYSLLDFLKQPRGLARKDQVLSRVHSTLKDIADLVPLAPSRLVPIVIQRMPNVFTKEPL 194

Query: 541  IVIMVYVESMLRLESGAIGELVGSEMLKELVYRLIELDVEIKWSHILRDDSSKGIFDMEL 720
              IM+YVE+MLRLE GAI ELVG+ ML  L+ RL++LDVEI W  +L+DD SKGIF+MEL
Sbjct: 195  --IMIYVENMLRLEGGAIRELVGNMMLVALMDRLVDLDVEIAWEEVLQDDCSKGIFEMEL 252

Query: 721  EDVEETADDAENDGGEFPGESSSR-----TVVAEKLDSLMVLTFEHLKSCAVGGRLVKVF 885
            ED+EE ADD ENDGGE    S SR      ++AEKLDSLMVLTFEHL+SC  GGRL++VF
Sbjct: 253  EDMEEPADDVENDGGELHRGSLSRKSLGGNLIAEKLDSLMVLTFEHLESCEAGGRLIEVF 312

Query: 886  DILVESFRITVLNAYKSKFAQFVMFYACSLDPEKCGVTFAVMLEDIFF-SNDPPNTRMSA 1062
            + LV SF+ TVLNA+KSKFAQFVMFYAC+LDPE CGV FA +L D F  S  PP  RMSA
Sbjct: 313  ETLVLSFQTTVLNAFKSKFAQFVMFYACALDPENCGVRFARVLADFFVCSTFPPLNRMSA 372

Query: 1063 VAYLASYLSRGKFLSPSLVVSSLKRLVDWCLSYCQAQGGGDINPKSHSVFYSGCQAIMYV 1242
            VAYLASYLSRGKFL+ S V + L+RLV WCL YC+    GDINPK+H VFYSGCQAIMYV
Sbjct: 373  VAYLASYLSRGKFLTASFVANILERLVVWCLEYCKIH-DGDINPKAHQVFYSGCQAIMYV 431

Query: 1243 LCFRMRSLIDVPRLKSELLLMPIQLILKHPLNPLKVCFPCIVDEFLQQAKAAGLFTESAG 1422
            LCFRMRS+++VP L+S+LLL+P++ ILKHPL+PLKVC P IV+EFL+QAKAA LFT S  
Sbjct: 432  LCFRMRSMMNVPHLRSQLLLLPLETILKHPLSPLKVCLPSIVEEFLRQAKAARLFTVS-- 489

Query: 1423 TETFIFNEHLLVGSELSRAFGG 1488
             ETFIF++  L+ SELSRAFGG
Sbjct: 490  -ETFIFSD--LLESELSRAFGG 508


>ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like [Vitis vinifera]
          Length = 636

 Score =  630 bits (1626), Expect = e-178
 Identities = 338/509 (66%), Positives = 403/509 (79%), Gaps = 14/509 (2%)
 Frame = +1

Query: 4    MEDVNVSDLELVHLVRDALISDPR-ESDSYGQLVEVLHRKVNLTPDDVALIVTTLKALSG 180
            ME+VN SD ELV+ VR AL S P  +SDSY QL+ VLH K  L PD+VAL+VT+LKALSG
Sbjct: 15   MEEVNFSDSELVYHVRHALQSVPLGDSDSYDQLIGVLHHKERLAPDEVALLVTSLKALSG 74

Query: 181  AVSCIDIDRHESLLSAIFGMSMWSYGPDVSDALAELIVSLASSSGKFLVSCLEMLVGHFI 360
            AVSCID+  H+SLLS+IFGMS+W+YGPDV DAL ELI+SLA+SSG +L   L+MLV +F+
Sbjct: 75   AVSCIDMVHHKSLLSSIFGMSLWNYGPDVMDALLELILSLAASSGNYLDCSLDMLVSNFM 134

Query: 361  PPKNVQDLLKQSRGLARKDRVLSQVHSALKDISDLVPLAPDKLCPIVLGRMPKMSQKEP- 537
            PP ++ D LKQ RGLARKD+VLS+VHS LKDI+DLVPLAP +L PIV+ RMP +  KEP 
Sbjct: 135  PPYSLLDFLKQPRGLARKDQVLSRVHSTLKDIADLVPLAPSRLVPIVIQRMPNVFTKEPV 194

Query: 538  ------LIVIMVYVESMLRLESGAIGELVGSEMLKELVYRLIELDVEIKWSHILRDDSSK 699
                  L  I +YVE+MLRLE GAI ELVG+ ML  L+ RL++LDVEI W  +L+DD SK
Sbjct: 195  SSICSTLFRIQIYVENMLRLEGGAIRELVGNMMLVALMDRLVDLDVEIAWEEVLQDDCSK 254

Query: 700  GIFDMELEDVEETADDAENDGGEFPGESSSR-----TVVAEKLDSLMVLTFEHLKSCAVG 864
            GIF+MELED+EE ADD ENDGGE    S SR      ++AEKLDSLMVLTFEHL+SC  G
Sbjct: 255  GIFEMELEDMEEPADDVENDGGELHRGSLSRKSLGGNLIAEKLDSLMVLTFEHLESCEAG 314

Query: 865  GRLVKVFDILVESFRITVLNAYKSKFAQFVMFYACSLDPEKCGVTFAVMLEDIFF-SNDP 1041
            GRL++VF+ LV SF+ TVLNA+KSKFAQFVMFYAC+LDPE CGV FA +L D F  S  P
Sbjct: 315  GRLIEVFETLVLSFQTTVLNAFKSKFAQFVMFYACALDPENCGVRFARVLADFFVCSTFP 374

Query: 1042 PNTRMSAVAYLASYLSRGKFLSPSLVVSSLKRLVDWCLSYCQAQGGGDINPKSHSVFYSG 1221
            P  RMSAVAYLASYLSRGKFL+ S V + L+RLV WCL YC+    GDINPK+H VFYSG
Sbjct: 375  PLNRMSAVAYLASYLSRGKFLTASFVANILERLVVWCLEYCKIH-DGDINPKAHQVFYSG 433

Query: 1222 CQAIMYVLCFRMRSLIDVPRLKSELLLMPIQLILKHPLNPLKVCFPCIVDEFLQQAKAAG 1401
            CQAIMYVLCFRMRS+++VP L+S+LLL+P++ ILKHPL+PLKVC P IV+EFL+QAKAA 
Sbjct: 434  CQAIMYVLCFRMRSMMNVPHLRSQLLLLPLETILKHPLSPLKVCLPSIVEEFLRQAKAAR 493

Query: 1402 LFTESAGTETFIFNEHLLVGSELSRAFGG 1488
            LFT S   ETFIF++  L+ SELSRAFGG
Sbjct: 494  LFTVS---ETFIFSD--LLESELSRAFGG 517


>ref|XP_006483466.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like isoform X1 [Citrus sinensis]
          Length = 628

 Score =  616 bits (1588), Expect = e-174
 Identities = 330/503 (65%), Positives = 394/503 (78%), Gaps = 8/503 (1%)
 Frame = +1

Query: 4    MEDVNVSDLELVHLVRDALIS-DPRESDSYGQLVEVLHRKVNLTPDDVALIVTTLKALSG 180
            MEDVN+SDLELV+ VR+AL S    ++D+Y QLV V+H    L PD+ AL+ T+LKALSG
Sbjct: 15   MEDVNISDLELVYHVREALTSVQSGDNDNYNQLVAVMHLSGRLDPDNRALLETSLKALSG 74

Query: 181  AVSCIDIDRHESLLSAIFGMSMWSYGPDVSDALAELIVSLASSSGKFLVSCLEMLVGHFI 360
            AVS IDI  HESLL +IFGMSMW+Y PDV DAL  LI+SLA+S+GK++ SCL MLV +F 
Sbjct: 75   AVSYIDISHHESLLVSIFGMSMWNYDPDVMDALKGLIISLAASNGKYVDSCLTMLVSNFT 134

Query: 361  PPKNVQDLLKQSRGLARKDRVLSQVHSALKDISDLVPLAPDKLCPIVLGRMPKMSQK-EP 537
            PP    D LK+  GL RK +VLS+VH+ALK I DLVPLAP +L PIV+ RMP +  K E 
Sbjct: 135  PPSYFLDKLKEPHGLERKHQVLSRVHAALKSIFDLVPLAPTRLLPIVVQRMPTVHNKHER 194

Query: 538  LIVIMVYVESMLRLESGAIGELVGSEMLKELVYRLIELDVEIKWSHILRDDSSKGIFDME 717
            L +I+VY E+ML+LES A+GELV S +L  +V RLI+LD+EI W  IL DD SKGIF+ME
Sbjct: 195  LKMIVVYTENMLKLESSAMGELVRSTLLMAVVDRLIDLDMEIGWDDILHDDFSKGIFEME 254

Query: 718  LEDVEETADDAENDGGEFPGESSSR-----TVVAEKLDSLMVLTFEHLKSCAVGGRLVKV 882
            LEDVEE ADDAE  G E P  S SR      ++AE LDSLMVLTFEHL+SC   GRL++V
Sbjct: 255  LEDVEEAADDAEQVGDELPSGSLSRKSLSGNLIAELLDSLMVLTFEHLESCEGTGRLIEV 314

Query: 883  FDILVESFRITVLNAYKSKFAQFVMFYACSLDPEKCGVTFAVMLEDIFFSN-DPPNTRMS 1059
            F+IL++SF+ITVLNAYKSKFAQFVMFYAC+LDPE CG+ FA ML D+F S   PP TRMS
Sbjct: 315  FEILLQSFQITVLNAYKSKFAQFVMFYACALDPENCGLRFATMLADVFVSGLYPPLTRMS 374

Query: 1060 AVAYLASYLSRGKFLSPSLVVSSLKRLVDWCLSYCQAQGGGDINPKSHSVFYSGCQAIMY 1239
            AV+YLAS+LSR +FLSP  +VS LKRLVDWCL YC    GGDINPK+H VFYSGCQAIMY
Sbjct: 375  AVSYLASFLSRARFLSPCFIVSLLKRLVDWCLEYCNIL-GGDINPKAHRVFYSGCQAIMY 433

Query: 1240 VLCFRMRSLIDVPRLKSELLLMPIQLILKHPLNPLKVCFPCIVDEFLQQAKAAGLFTESA 1419
            VLCFRMRS++D+PRLKS+LLLMP++ +LKH LNPLKVC P +V EFLQQ+KAA LFT S 
Sbjct: 434  VLCFRMRSIMDIPRLKSQLLLMPLETVLKHDLNPLKVCLPSVVSEFLQQSKAARLFTVS- 492

Query: 1420 GTETFIFNEHLLVGSELSRAFGG 1488
              ETF+FN+  L+ SELSRAFGG
Sbjct: 493  --ETFVFND--LLESELSRAFGG 511


>ref|XP_006483561.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            rrn3-like isoform X3 [Citrus sinensis]
          Length = 534

 Score =  614 bits (1583), Expect = e-173
 Identities = 330/503 (65%), Positives = 394/503 (78%), Gaps = 8/503 (1%)
 Frame = +1

Query: 4    MEDVNVSDLELVHLVRDALIS-DPRESDSYGQLVEVLHRKVNLTPDDVALIVTTLKALSG 180
            MEDVN+SDLELV+ VR+AL S    ++D+Y QLV V+H    L PD+ AL+ T+LKALSG
Sbjct: 15   MEDVNISDLELVYHVREALTSVQSGDNDNYNQLVAVMHLSGRLDPDNRALLETSLKALSG 74

Query: 181  AVSCIDIDRHESLLSAIFGMSMWSYGPDVSDALAELIVSLASSSGKFLVSCLEMLVGHFI 360
            AVS IDI  HESLL +IFGMSMW+Y PD+ DAL  LI+SLA+SSGK++ SCL MLVG+F 
Sbjct: 75   AVSYIDISHHESLLVSIFGMSMWNYDPDIMDALKGLIISLAASSGKYVDSCLTMLVGNFT 134

Query: 361  PPKNVQDLLKQSRGLARKDRVLSQVHSALKDISDLVPLAPDKLCPIVLGRMPKMSQK-EP 537
            PP    D LK+  GL RK +VLS+VH+ALK I DLVPLAP +L PIV+ RMP +  K E 
Sbjct: 135  PPSYFLDKLKEPHGLERKHQVLSRVHAALKSIFDLVPLAPMRLLPIVVQRMPTVHNKHER 194

Query: 538  LIVIMVYVESMLRLESGAIGELVGSEMLKELVYRLIELDVEIKWSHILRDDSSKGIFDME 717
            L +I+VY E+ML+LES A+GELV S +L  +V RLI+LD+EI W  IL DD SKGIF+ME
Sbjct: 195  LKLIVVYTENMLKLESSAMGELVRSTLLMAVVDRLIDLDMEIGWDDILHDDFSKGIFEME 254

Query: 718  LEDVEETADDAENDGGEFPGESSSR-----TVVAEKLDSLMVLTFEHLKSCAVGGRLVKV 882
            LEDVEE ADDAE  G E P  S SR      ++AE LDSL+VLTFEHL+SC   GRL++V
Sbjct: 255  LEDVEEAADDAEQVGDELPSGSISRKSLSGNLIAELLDSLLVLTFEHLESCEGTGRLIEV 314

Query: 883  FDILVESFRITVLNAYKSKFAQFVMFYACSLDPEKCGVTFAVMLEDIFFSN-DPPNTRMS 1059
            F+IL++SF+ITVLNAYKSKFAQFVMFYAC+LDPE CG+ FA ML D+F S   PP TRMS
Sbjct: 315  FEILLQSFQITVLNAYKSKFAQFVMFYACALDPENCGLRFATMLADVFVSGLYPPLTRMS 374

Query: 1060 AVAYLASYLSRGKFLSPSLVVSSLKRLVDWCLSYCQAQGGGDINPKSHSVFYSGCQAIMY 1239
            +V+YLASYLSR +FLSP  +VS LKRLVDWCL YC    GG+INPK+H VFYSGCQAIMY
Sbjct: 375  SVSYLASYLSRARFLSPCFIVSLLKRLVDWCLEYCNIP-GGNINPKAHRVFYSGCQAIMY 433

Query: 1240 VLCFRMRSLIDVPRLKSELLLMPIQLILKHPLNPLKVCFPCIVDEFLQQAKAAGLFTESA 1419
            VLCFRMRS++DVPRLKS+LLLMP++ +LKH LNPLKVC P +V EFLQQ+KAA LFT S 
Sbjct: 434  VLCFRMRSIMDVPRLKSQLLLMPLETVLKHNLNPLKVCLPSVVSEFLQQSKAARLFTVS- 492

Query: 1420 GTETFIFNEHLLVGSELSRAFGG 1488
              ETFIFN+  L+ SELSR FGG
Sbjct: 493  --ETFIFND--LLESELSRDFGG 511


>ref|XP_006483559.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            rrn3-like isoform X1 [Citrus sinensis]
          Length = 628

 Score =  614 bits (1583), Expect = e-173
 Identities = 330/503 (65%), Positives = 394/503 (78%), Gaps = 8/503 (1%)
 Frame = +1

Query: 4    MEDVNVSDLELVHLVRDALIS-DPRESDSYGQLVEVLHRKVNLTPDDVALIVTTLKALSG 180
            MEDVN+SDLELV+ VR+AL S    ++D+Y QLV V+H    L PD+ AL+ T+LKALSG
Sbjct: 15   MEDVNISDLELVYHVREALTSVQSGDNDNYNQLVAVMHLSGRLDPDNRALLETSLKALSG 74

Query: 181  AVSCIDIDRHESLLSAIFGMSMWSYGPDVSDALAELIVSLASSSGKFLVSCLEMLVGHFI 360
            AVS IDI  HESLL +IFGMSMW+Y PD+ DAL  LI+SLA+SSGK++ SCL MLVG+F 
Sbjct: 75   AVSYIDISHHESLLVSIFGMSMWNYDPDIMDALKGLIISLAASSGKYVDSCLTMLVGNFT 134

Query: 361  PPKNVQDLLKQSRGLARKDRVLSQVHSALKDISDLVPLAPDKLCPIVLGRMPKMSQK-EP 537
            PP    D LK+  GL RK +VLS+VH+ALK I DLVPLAP +L PIV+ RMP +  K E 
Sbjct: 135  PPSYFLDKLKEPHGLERKHQVLSRVHAALKSIFDLVPLAPMRLLPIVVQRMPTVHNKHER 194

Query: 538  LIVIMVYVESMLRLESGAIGELVGSEMLKELVYRLIELDVEIKWSHILRDDSSKGIFDME 717
            L +I+VY E+ML+LES A+GELV S +L  +V RLI+LD+EI W  IL DD SKGIF+ME
Sbjct: 195  LKLIVVYTENMLKLESSAMGELVRSTLLMAVVDRLIDLDMEIGWDDILHDDFSKGIFEME 254

Query: 718  LEDVEETADDAENDGGEFPGESSSR-----TVVAEKLDSLMVLTFEHLKSCAVGGRLVKV 882
            LEDVEE ADDAE  G E P  S SR      ++AE LDSL+VLTFEHL+SC   GRL++V
Sbjct: 255  LEDVEEAADDAEQVGDELPSGSISRKSLSGNLIAELLDSLLVLTFEHLESCEGTGRLIEV 314

Query: 883  FDILVESFRITVLNAYKSKFAQFVMFYACSLDPEKCGVTFAVMLEDIFFSN-DPPNTRMS 1059
            F+IL++SF+ITVLNAYKSKFAQFVMFYAC+LDPE CG+ FA ML D+F S   PP TRMS
Sbjct: 315  FEILLQSFQITVLNAYKSKFAQFVMFYACALDPENCGLRFATMLADVFVSGLYPPLTRMS 374

Query: 1060 AVAYLASYLSRGKFLSPSLVVSSLKRLVDWCLSYCQAQGGGDINPKSHSVFYSGCQAIMY 1239
            +V+YLASYLSR +FLSP  +VS LKRLVDWCL YC    GG+INPK+H VFYSGCQAIMY
Sbjct: 375  SVSYLASYLSRARFLSPCFIVSLLKRLVDWCLEYCNIP-GGNINPKAHRVFYSGCQAIMY 433

Query: 1240 VLCFRMRSLIDVPRLKSELLLMPIQLILKHPLNPLKVCFPCIVDEFLQQAKAAGLFTESA 1419
            VLCFRMRS++DVPRLKS+LLLMP++ +LKH LNPLKVC P +V EFLQQ+KAA LFT S 
Sbjct: 434  VLCFRMRSIMDVPRLKSQLLLMPLETVLKHNLNPLKVCLPSVVSEFLQQSKAARLFTVS- 492

Query: 1420 GTETFIFNEHLLVGSELSRAFGG 1488
              ETFIFN+  L+ SELSR FGG
Sbjct: 493  --ETFIFND--LLESELSRDFGG 511


>gb|EXB36892.1| hypothetical protein L484_016497 [Morus notabilis]
          Length = 616

 Score =  583 bits (1502), Expect = e-164
 Identities = 313/501 (62%), Positives = 385/501 (76%), Gaps = 6/501 (1%)
 Frame = +1

Query: 4    MEDVNVSDLELVHLVRDALIS-DPRESDSYGQLVEVLHRKVNLTPDDVALIVTTLKALSG 180
            ++D + +D +LV+ VRDAL S    +SD Y +LV V+H +  L PD+VAL+VT+LKALSG
Sbjct: 15   LDDADFTDYDLVYHVRDALTSVSMGDSDKYNELVAVMHHRGPLAPDEVALLVTSLKALSG 74

Query: 181  AVSCIDIDRHESLLSAIFGMSMWSYGPDVSDALAELIVSLASSSGKFLVSCLEMLVGHFI 360
            AVS ID   HESLLS+IF M+MW+Y PDV DAL ELI+SLA+S+G ++ SCL+MLVG+F 
Sbjct: 75   AVSYIDSVLHESLLSSIFSMNMWNYRPDVMDALLELIISLAASNGTYIDSCLDMLVGNFT 134

Query: 361  PPKNVQDLLKQSRGLARKDRVLSQVHSALKDISDLVPLAPDKLCPIVLGRMPKMSQKEPL 540
            PP    D+LKQ RG+ARKD+VLS+VHS+LK ++DLVPL+P +L PI++ R P    KE  
Sbjct: 135  PPNYFTDMLKQPRGIARKDQVLSRVHSSLKVLADLVPLSPMRLLPIIIQRKPHYCSKE-- 192

Query: 541  IVIMVYVESMLRLESGAIGELVGSEMLKELVYRLIELDVEIKWSHILRDDSSKGIFDMEL 720
            I++++YVE+ML+LESG  GELVGS ML  LV  L++LDVEI W  IL+D+S+KGIF MEL
Sbjct: 193  IILVIYVENMLKLESGIFGELVGSAMLSGLVDLLLDLDVEIGWDDILQDESAKGIFSMEL 252

Query: 721  EDVEETADDAENDGGEFPGESSSRTVV----AEKLDSLMVLTFEHLKSCAVGGRLVKVFD 888
            EDV+E  DD   DGGE P E S +++V    A KLDSLMVL FEHL+SC VG RLV+VF+
Sbjct: 253  EDVDEDIDDELMDGGELPRELSRKSLVGNLFARKLDSLMVLIFEHLESCEVGRRLVEVFE 312

Query: 889  ILVESFRITVLNAYKSKFAQFVMFYACSLDPEKCGVTFAVMLEDIFFSND-PPNTRMSAV 1065
             L++ F+ TVL AYKSKF+QFVMFYAC+LDPE CGV FA ML D F SN  PP  RMSAV
Sbjct: 313  TLLQPFQKTVLTAYKSKFSQFVMFYACALDPENCGVRFANMLGDTFISNSHPPLLRMSAV 372

Query: 1066 AYLASYLSRGKFLSPSLVVSSLKRLVDWCLSYCQAQGGGDINPKSHSVFYSGCQAIMYVL 1245
            AYLASYLSRGKFLS SL+  +LKRLVDWCL YC  Q  G+INPK+H +FYSGCQAIMY L
Sbjct: 373  AYLASYLSRGKFLSTSLIADTLKRLVDWCLDYCTIQ-EGEINPKAHRIFYSGCQAIMYAL 431

Query: 1246 CFRMRSLIDVPRLKSELLLMPIQLILKHPLNPLKVCFPCIVDEFLQQAKAAGLFTESAGT 1425
            CFRMRS++ VP  KS+ LLMPI LIL H L+PLKVC P IV EFL+Q+KAAGLF  S   
Sbjct: 432  CFRMRSIMGVPWFKSQ-LLMPINLILSHKLSPLKVCLPSIVTEFLRQSKAAGLFITS--- 487

Query: 1426 ETFIFNEHLLVGSELSRAFGG 1488
            E F F+++L   SELS+ FGG
Sbjct: 488  ERFNFDDYL--ESELSKGFGG 506


>ref|XP_004155826.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like [Cucumis sativus]
          Length = 625

 Score =  568 bits (1463), Expect = e-159
 Identities = 309/501 (61%), Positives = 379/501 (75%), Gaps = 6/501 (1%)
 Frame = +1

Query: 4    MEDVNVSDLELVHLVRDALIS-DPRESDSYGQLVEVLHRKVNLTPDDVALIVTTLKALSG 180
            MEDVN++D +LV  +R  L S    + D Y QLV V+H +  L+PD+VAL+VT LKALSG
Sbjct: 15   MEDVNLTDAQLVDFIRGFLSSVSLGDIDGYNQLVGVIHHRDRLSPDEVALLVTCLKALSG 74

Query: 181  AVSCIDIDRHESLLSAIFGMSMWSYGPDVSDALAELIVSLASSSGKFLVSCLEMLVGHFI 360
            AVSCIDI  HESLL+AIF MS+W YG +V DAL ELI+SLA S+GK++ SCL+MLV +F+
Sbjct: 75   AVSCIDIILHESLLAAIFKMSLWDYGSNVMDALIELIISLAVSNGKYVDSCLDMLVNNFM 134

Query: 361  PPKNVQDLLKQSRGLARKDRVLSQVHSALKDISDLVPLAPDKLCPIVLGRMPKMSQKEPL 540
            PP +  DLLK+  GL RK+ VLS+VH+ALKDISDLVPLAP +L   V+ +M ++   E L
Sbjct: 135  PPNSYMDLLKKPHGLTRKEEVLSRVHTALKDISDLVPLAPLRLEQKVVHKMQRVFFNESL 194

Query: 541  IVIMVYVESMLRLESGAIGELVGSEMLKELVYRLIELDVEIKWSHILRDDSSKGIFDMEL 720
              I  YVE+MLRLE GA+ E VG ++L  LV +L++LDVEI W  IL+DD SKGIF+MEL
Sbjct: 195  TTI--YVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMEL 252

Query: 721  EDVEETADDAENDGGEFPGESSSRT----VVAEKLDSLMVLTFEHLKSCAVGGRLVKVFD 888
            ED ++T DD   D  E P E S R+    V+AE LDSL+VLTFEHL+SC   GRL +VFD
Sbjct: 253  EDDDDTTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLESCERDGRLNEVFD 312

Query: 889  ILVESFRITVLNAYKSKFAQFVMFYACSLDPEKCGVTFAVMLEDIFFS-NDPPNTRMSAV 1065
            IL+ SF+ TVL AYKSKFAQF++FYACSLDPE CG  FA+ L D+F S NDPP  RMSAV
Sbjct: 313  ILLLSFQRTVLTAYKSKFAQFIVFYACSLDPEVCGARFAISLADMFVSCNDPPLIRMSAV 372

Query: 1066 AYLASYLSRGKFLSPSLVVSSLKRLVDWCLSYCQAQGGGDINPKSHSVFYSGCQAIMYVL 1245
            +YLAS+LSRGKFL+ SLV + LKRLVDWCL Y +     D NPK+H VFYSGCQAIMYVL
Sbjct: 373  SYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGKTL-NVDPNPKAHKVFYSGCQAIMYVL 431

Query: 1246 CFRMRSLIDVPRLKSELLLMPIQLILKHPLNPLKVCFPCIVDEFLQQAKAAGLFTESAGT 1425
            CFRMRS++++PRLKS+LLLMPI  +L H L+PLKVC P IV+EFL+QAK A LFT S   
Sbjct: 432  CFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLRQAKVANLFTPS--- 488

Query: 1426 ETFIFNEHLLVGSELSRAFGG 1488
            E FIFN   L+ S+ SR+FGG
Sbjct: 489  ENFIFNG--LLESDYSRSFGG 507


>ref|XP_004133864.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like [Cucumis sativus]
          Length = 626

 Score =  568 bits (1463), Expect = e-159
 Identities = 309/501 (61%), Positives = 379/501 (75%), Gaps = 6/501 (1%)
 Frame = +1

Query: 4    MEDVNVSDLELVHLVRDALIS-DPRESDSYGQLVEVLHRKVNLTPDDVALIVTTLKALSG 180
            MEDVN++D +LV  +R  L S    + D Y QLV V+H +  L+PD+VAL+VT LKALSG
Sbjct: 15   MEDVNLTDAQLVDFIRGFLSSVSLGDIDGYNQLVGVIHHRDRLSPDEVALLVTCLKALSG 74

Query: 181  AVSCIDIDRHESLLSAIFGMSMWSYGPDVSDALAELIVSLASSSGKFLVSCLEMLVGHFI 360
            AVSCIDI  HESLL+AIF MS+W YG +V DAL ELI+SLA S+GK++ SCL+MLV +F+
Sbjct: 75   AVSCIDIILHESLLAAIFKMSLWDYGSNVMDALIELIISLAVSNGKYVDSCLDMLVNNFM 134

Query: 361  PPKNVQDLLKQSRGLARKDRVLSQVHSALKDISDLVPLAPDKLCPIVLGRMPKMSQKEPL 540
            PP +  DLLK+  GL RK+ VLS+VH+ALKDISDLVPLAP +L   V+ +M ++   E L
Sbjct: 135  PPNSYMDLLKKPHGLTRKEEVLSRVHTALKDISDLVPLAPLRLEQKVVHKMQRVFFNESL 194

Query: 541  IVIMVYVESMLRLESGAIGELVGSEMLKELVYRLIELDVEIKWSHILRDDSSKGIFDMEL 720
              I  YVE+MLRLE GA+ E VG ++L  LV +L++LDVEI W  IL+DD SKGIF+MEL
Sbjct: 195  TTI--YVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMEL 252

Query: 721  EDVEETADDAENDGGEFPGESSSRT----VVAEKLDSLMVLTFEHLKSCAVGGRLVKVFD 888
            ED ++T DD   D  E P E S R+    V+AE LDSL+VLTFEHL+SC   GRL +VFD
Sbjct: 253  EDDDDTTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLESCERDGRLNEVFD 312

Query: 889  ILVESFRITVLNAYKSKFAQFVMFYACSLDPEKCGVTFAVMLEDIFFS-NDPPNTRMSAV 1065
            IL+ SF+ TVL AYKSKFAQF++FYACSLDPE CG  FA+ L D+F S NDPP  RMSAV
Sbjct: 313  ILLLSFQRTVLTAYKSKFAQFIVFYACSLDPEVCGARFAISLADMFVSCNDPPLIRMSAV 372

Query: 1066 AYLASYLSRGKFLSPSLVVSSLKRLVDWCLSYCQAQGGGDINPKSHSVFYSGCQAIMYVL 1245
            +YLAS+LSRGKFL+ SLV + LKRLVDWCL Y +     D NPK+H VFYSGCQAIMYVL
Sbjct: 373  SYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGKTL-NVDPNPKAHKVFYSGCQAIMYVL 431

Query: 1246 CFRMRSLIDVPRLKSELLLMPIQLILKHPLNPLKVCFPCIVDEFLQQAKAAGLFTESAGT 1425
            CFRMRS++++PRLKS+LLLMPI  +L H L+PLKVC P IV+EFL+QAK A LFT S   
Sbjct: 432  CFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLRQAKVANLFTPS--- 488

Query: 1426 ETFIFNEHLLVGSELSRAFGG 1488
            E FIFN   L+ S+ SR+FGG
Sbjct: 489  ENFIFNG--LLESDYSRSFGG 507


>ref|XP_007046443.1| Major facilitator superfamily protein isoform 1 [Theobroma cacao]
            gi|590701668|ref|XP_007046444.1| Major facilitator
            superfamily protein isoform 1 [Theobroma cacao]
            gi|590701672|ref|XP_007046445.1| Major facilitator
            superfamily protein isoform 1 [Theobroma cacao]
            gi|508698704|gb|EOX90600.1| Major facilitator superfamily
            protein isoform 1 [Theobroma cacao]
            gi|508698705|gb|EOX90601.1| Major facilitator superfamily
            protein isoform 1 [Theobroma cacao]
            gi|508698706|gb|EOX90602.1| Major facilitator superfamily
            protein isoform 1 [Theobroma cacao]
          Length = 628

 Score =  561 bits (1445), Expect = e-157
 Identities = 314/502 (62%), Positives = 376/502 (74%), Gaps = 6/502 (1%)
 Frame = +1

Query: 1    MMED--VNVSDLELVHLVRDALISD-PRESDSYGQLVEVLHRKVNLTPDDVALIVTTLKA 171
            M ED  VN +D E+V  V+DAL S    +S+SY QLV V+H    L PD+VAL+ TTLKA
Sbjct: 11   MEEDNFVNFTDSEIVSHVKDALTSVLSGDSNSYNQLVAVMHHSKRLAPDEVALLETTLKA 70

Query: 172  LSGAVSCIDIDRHESLLSAIFGMSMWSYGPDVSDALAELIVSLASSSGKFLVSCLEMLVG 351
            L GAVSCID   H+SLLSAIF MSMW+YGP V+DALAELIVSLA S+GK+L  CL MLV 
Sbjct: 71   LGGAVSCIDTTLHDSLLSAIFSMSMWNYGPHVADALAELIVSLAISNGKYLDLCLGMLVS 130

Query: 352  HFIPPKNVQDLLKQSRGLARKDRVLSQVHSALKDISDLVPLAPDKLCPIVLGRMPKMSQK 531
            +F PP    D LK  RGL RK +VLS VH+A K ISD +PLAP +L  IVL  MP +  K
Sbjct: 131  NFTPPPYFLDKLKLPRGLERKGQVLSLVHAAFKKISDYIPLAPLRLSNIVLQGMPTIYHK 190

Query: 532  EPLIVIMVYVESMLRLESGAIGELVGSEMLKELVYRLIELDVEIKWSHILRDDSSKGIFD 711
            +  IVI  YVE+ML+LESG IGELVGS ML  +V +LIELD+EI W  IL+DD SKGIF+
Sbjct: 191  DRAIVI--YVENMLKLESGEIGELVGSTMLMAVVDQLIELDLEIGWDAILQDDFSKGIFE 248

Query: 712  MELEDVEETADDAENDGGEF--PGESSSRTVVAEKLDSLMVLTFEHLKSCAVGGRLVKVF 885
            MELEDV+E  + AE D GEF    +S +   +AE LD+L+VLTFEHL+SC   GRL KVF
Sbjct: 249  MELEDVDEVEESAEQDTGEFRLSRKSLAGNSIAELLDNLLVLTFEHLESCERAGRLAKVF 308

Query: 886  DILVESFRITVLNAYKSKFAQFVMFYACSLDPEKCGVTFAVMLEDIFFSNDPPN-TRMSA 1062
            + L++SF+ITV++AYKSKF QFVMFYAC+LDP+ CG+ FA ML D+F  +  P   RMSA
Sbjct: 309  ETLLQSFQITVMSAYKSKFTQFVMFYACALDPDYCGMRFATMLADLFVQDSHPQPIRMSA 368

Query: 1063 VAYLASYLSRGKFLSPSLVVSSLKRLVDWCLSYCQAQGGGDINPKSHSVFYSGCQAIMYV 1242
            VAYLASYLSR KFLS SL+ S LKRLVDWCL Y +    GDINP +H VFYSGCQAIMYV
Sbjct: 369  VAYLASYLSRAKFLSASLISSMLKRLVDWCLEYGKTP-DGDINPNAHRVFYSGCQAIMYV 427

Query: 1243 LCFRMRSLIDVPRLKSELLLMPIQLILKHPLNPLKVCFPCIVDEFLQQAKAAGLFTESAG 1422
            LCFRM+  +DVPRLK + LLMP++ ILKH LNPLKVC P +V+EFL+Q+KAA LFT S  
Sbjct: 428  LCFRMKVFMDVPRLKMQ-LLMPMEQILKHKLNPLKVCLPSVVEEFLRQSKAACLFTVS-- 484

Query: 1423 TETFIFNEHLLVGSELSRAFGG 1488
             +TF+F+   L+ SELSRAFGG
Sbjct: 485  -KTFVFDG--LLESELSRAFGG 503


>ref|XP_003547884.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like isoform X1 [Glycine max]
            gi|571527491|ref|XP_006599254.1| PREDICTED: RNA
            polymerase I-specific transcription initiation factor
            RRN3-like isoform X2 [Glycine max]
          Length = 627

 Score =  545 bits (1405), Expect = e-152
 Identities = 297/502 (59%), Positives = 381/502 (75%), Gaps = 7/502 (1%)
 Frame = +1

Query: 4    MEDVNVSDLELVHLVRDALIS-DPRESDSYGQLVEVLHRKVNLTPDDVALIVTTLKALSG 180
            ME+ + SD +LV   R  L++    + ++Y +LV  LH K NL PD+VA++VTTLKALSG
Sbjct: 15   MENDDFSDSQLVRHFRGVLVAVTTGDRENYDELVGYLHPKKNLNPDEVAILVTTLKALSG 74

Query: 181  AVSCIDIDRHESLLSAIFGMSMWSYGPDVSDALAELIVSLASSSGKFLVSCLEMLVGHFI 360
            AVS ID   HESLL A+  MS+W+YG D+ DAL ELI+SLA+S+GK++  CLEMLV HF+
Sbjct: 75   AVSYIDSVHHESLLFAVSRMSLWNYGIDIMDALLELIISLAASNGKYIDWCLEMLVKHFV 134

Query: 361  PPKNVQDLLKQSRGLARKDRVLSQVHSALKDISDLVPLAPDKLCPIVLGRMPKMSQKEPL 540
            PP  + D L+Q  G+ RK++VLS+VH+ALK+I+DLVPLAP +L PIV+ +MP +  KE  
Sbjct: 135  PPFYLLDSLRQENGIDRKNKVLSRVHAALKEIADLVPLAPLRLSPIVIQKMPSVFSKETE 194

Query: 541  IVIMVYVESMLRLESGAIGELVGSEMLKELVYRLIELDVEIKWSHILRDDSSKGIFDMEL 720
            IV  +YVE+MLRLESGAIGE VGS ML  LV RL+ELDVEI W  IL++D +KGIF+MEL
Sbjct: 195  IV--MYVENMLRLESGAIGETVGSIMLPALVDRLLELDVEIGWDGILQED-AKGIFEMEL 251

Query: 721  EDVEETADDAENDGGEFPGESSSR-----TVVAEKLDSLMVLTFEHLKSCAVGGRLVKVF 885
            EDV E AD+ EN     P E  +R      +V EKLDSLMVL F HL+SC   GRL +VF
Sbjct: 252  EDVTEFADEDENCDSMPPSELLNRKNLQGNLVVEKLDSLMVLAFLHLESCQSSGRLTEVF 311

Query: 886  DILVESFRITVLNAYKSKFAQFVMFYACSLDPEKCGVTFAVMLEDIFFSN-DPPNTRMSA 1062
            D L+ SF+ TVLNAYKSKF Q+VMFYAC+LDPE CGV FA++L D+F  + +PP TRMSA
Sbjct: 312  DTLLASFQRTVLNAYKSKFTQYVMFYACALDPEGCGVKFAMVLADMFGCDVNPPITRMSA 371

Query: 1063 VAYLASYLSRGKFLSPSLVVSSLKRLVDWCLSYCQAQGGGDINPKSHSVFYSGCQAIMYV 1242
             AYLASYL+R KFLS +LV + ++ LVDWC +YC+ +   D+NP++H VFYSGCQAIMY+
Sbjct: 372  AAYLASYLTRAKFLSAALVTNIIQSLVDWCYAYCKLR-DFDMNPRAHQVFYSGCQAIMYI 430

Query: 1243 LCFRMRSLIDVPRLKSELLLMPIQLILKHPLNPLKVCFPCIVDEFLQQAKAAGLFTESAG 1422
            LCFRMRSL+D+PRLK +LL MP++ ILKH L+PLKVC P +V EFL+QAKAA LF  S  
Sbjct: 431  LCFRMRSLMDIPRLKLQLLNMPMEAILKHKLSPLKVCLPTVVVEFLRQAKAAQLFMAS-- 488

Query: 1423 TETFIFNEHLLVGSELSRAFGG 1488
             E+F+F++  ++ S+LS+AFGG
Sbjct: 489  -ESFVFDD--MLESDLSKAFGG 507


>ref|XP_003534228.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like [Glycine max]
          Length = 628

 Score =  537 bits (1384), Expect = e-150
 Identities = 294/502 (58%), Positives = 379/502 (75%), Gaps = 7/502 (1%)
 Frame = +1

Query: 4    MEDVNVSDLELVHLVRDALIS-DPRESDSYGQLVEVLHRKVNLTPDDVALIVTTLKALSG 180
            ME+ + SD +LVH  R  L++    + ++Y +LV  LH K +L PD+VA++VTTLKALSG
Sbjct: 15   MENNDFSDSQLVHHFRGVLVAVTTGDRENYDELVGYLHPKKHLNPDEVAILVTTLKALSG 74

Query: 181  AVSCIDIDRHESLLSAIFGMSMWSYGPDVSDALAELIVSLASSSGKFLVSCLEMLVGHFI 360
            AVS ID   HESLL A+  MS+W+ G D+ DAL ELI+SLA S+GK++  CLEMLV +F+
Sbjct: 75   AVSYIDSVHHESLLFAVSRMSLWNCGIDIMDALLELIISLAVSNGKYIDWCLEMLVKNFV 134

Query: 361  PPKNVQDLLKQSRGLARKDRVLSQVHSALKDISDLVPLAPDKLCPIVLGRMPKMSQKEPL 540
            PP  + D L+Q  G+ RK++VLS+VH+ALK+I+DLVPLAP +L PIV+ +MP +  KE  
Sbjct: 135  PPFYLLDSLRQENGIDRKNKVLSRVHAALKEIADLVPLAPLRLSPIVIQKMPSVFSKETE 194

Query: 541  IVIMVYVESMLRLESGAIGELVGSEMLKELVYRLIELDVEIKWSHILRDDSSKGIFDMEL 720
            IV  +YVE+MLRLESGA+GE VGS ML  LV RL+ELDVEI W  IL++D +KGIF+MEL
Sbjct: 195  IV--MYVENMLRLESGALGETVGSTMLPALVDRLLELDVEIGWDGILQED-AKGIFEMEL 251

Query: 721  EDVEETADDAENDGGEFPGESSSR-----TVVAEKLDSLMVLTFEHLKSCAVGGRLVKVF 885
            EDV E  D+ EN       E  +R      +V EKLDSLMVL F HL+SC   GRL +VF
Sbjct: 252  EDVTEFTDEDENCDSMLSSELLNRKNLQGNLVVEKLDSLMVLAFLHLESCQNSGRLAEVF 311

Query: 886  DILVESFRITVLNAYKSKFAQFVMFYACSLDPEKCGVTFAVMLEDIFFSN-DPPNTRMSA 1062
            + L+ SF+ TVLNAYKSKF QFVMFYAC+LDPE CGV FA++L D+F  + +PP TRMSA
Sbjct: 312  NTLLASFQRTVLNAYKSKFTQFVMFYACALDPEGCGVKFAMVLADMFGGDANPPITRMSA 371

Query: 1063 VAYLASYLSRGKFLSPSLVVSSLKRLVDWCLSYCQAQGGGDINPKSHSVFYSGCQAIMYV 1242
            VAYLASYL+R KFLS +LV S ++ LVDWC +YC+ +   D+NP++H VFYSGCQAIMY+
Sbjct: 372  VAYLASYLTRAKFLSAALVTSIIQSLVDWCYAYCKFR-DFDMNPRAHQVFYSGCQAIMYI 430

Query: 1243 LCFRMRSLIDVPRLKSELLLMPIQLILKHPLNPLKVCFPCIVDEFLQQAKAAGLFTESAG 1422
            +CFRMRSL+DVPRLK +LL MP++ ILKH L+PLKVC P +V EFL+QAKAA LF  S  
Sbjct: 431  MCFRMRSLMDVPRLKLQLLNMPMEAILKHKLSPLKVCLPTVVVEFLRQAKAAQLFMAS-- 488

Query: 1423 TETFIFNEHLLVGSELSRAFGG 1488
             E+F+F++  ++ S+LS+AFGG
Sbjct: 489  -ESFVFDD--MLESDLSKAFGG 507


>ref|XP_006483467.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like isoform X2 [Citrus sinensis]
          Length = 535

 Score =  531 bits (1369), Expect = e-148
 Identities = 281/424 (66%), Positives = 334/424 (78%), Gaps = 7/424 (1%)
 Frame = +1

Query: 238  MSMWSYGPDVSDALAELIVSLASSSGKFLVSCLEMLVGHFIPPKNVQDLLKQSRGLARKD 417
            MSMW+Y PDV DAL  LI+SLA+S+GK++ SCL MLV +F PP    D LK+  GL RK 
Sbjct: 1    MSMWNYDPDVMDALKGLIISLAASNGKYVDSCLTMLVSNFTPPSYFLDKLKEPHGLERKH 60

Query: 418  RVLSQVHSALKDISDLVPLAPDKLCPIVLGRMPKMSQK-EPLIVIMVYVESMLRLESGAI 594
            +VLS+VH+ALK I DLVPLAP +L PIV+ RMP +  K E L +I+VY E+ML+LES A+
Sbjct: 61   QVLSRVHAALKSIFDLVPLAPTRLLPIVVQRMPTVHNKHERLKMIVVYTENMLKLESSAM 120

Query: 595  GELVGSEMLKELVYRLIELDVEIKWSHILRDDSSKGIFDMELEDVEETADDAENDGGEFP 774
            GELV S +L  +V RLI+LD+EI W  IL DD SKGIF+MELEDVEE ADDAE  G E P
Sbjct: 121  GELVRSTLLMAVVDRLIDLDMEIGWDDILHDDFSKGIFEMELEDVEEAADDAEQVGDELP 180

Query: 775  GESSSR-----TVVAEKLDSLMVLTFEHLKSCAVGGRLVKVFDILVESFRITVLNAYKSK 939
              S SR      ++AE LDSLMVLTFEHL+SC   GRL++VF+IL++SF+ITVLNAYKSK
Sbjct: 181  SGSLSRKSLSGNLIAELLDSLMVLTFEHLESCEGTGRLIEVFEILLQSFQITVLNAYKSK 240

Query: 940  FAQFVMFYACSLDPEKCGVTFAVMLEDIFFSN-DPPNTRMSAVAYLASYLSRGKFLSPSL 1116
            FAQFVMFYAC+LDPE CG+ FA ML D+F S   PP TRMSAV+YLAS+LSR +FLSP  
Sbjct: 241  FAQFVMFYACALDPENCGLRFATMLADVFVSGLYPPLTRMSAVSYLASFLSRARFLSPCF 300

Query: 1117 VVSSLKRLVDWCLSYCQAQGGGDINPKSHSVFYSGCQAIMYVLCFRMRSLIDVPRLKSEL 1296
            +VS LKRLVDWCL YC   GG DINPK+H VFYSGCQAIMYVLCFRMRS++D+PRLKS+L
Sbjct: 301  IVSLLKRLVDWCLEYCNILGG-DINPKAHRVFYSGCQAIMYVLCFRMRSIMDIPRLKSQL 359

Query: 1297 LLMPIQLILKHPLNPLKVCFPCIVDEFLQQAKAAGLFTESAGTETFIFNEHLLVGSELSR 1476
            LLMP++ +LKH LNPLKVC P +V EFLQQ+KAA LFT S   ETF+FN+  L+ SELSR
Sbjct: 360  LLMPLETVLKHDLNPLKVCLPSVVSEFLQQSKAARLFTVS---ETFVFND--LLESELSR 414

Query: 1477 AFGG 1488
            AFGG
Sbjct: 415  AFGG 418


>ref|XP_006483560.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            rrn3-like isoform X2 [Citrus sinensis]
          Length = 535

 Score =  530 bits (1364), Expect = e-148
 Identities = 281/424 (66%), Positives = 334/424 (78%), Gaps = 7/424 (1%)
 Frame = +1

Query: 238  MSMWSYGPDVSDALAELIVSLASSSGKFLVSCLEMLVGHFIPPKNVQDLLKQSRGLARKD 417
            MSMW+Y PD+ DAL  LI+SLA+SSGK++ SCL MLVG+F PP    D LK+  GL RK 
Sbjct: 1    MSMWNYDPDIMDALKGLIISLAASSGKYVDSCLTMLVGNFTPPSYFLDKLKEPHGLERKH 60

Query: 418  RVLSQVHSALKDISDLVPLAPDKLCPIVLGRMPKMSQK-EPLIVIMVYVESMLRLESGAI 594
            +VLS+VH+ALK I DLVPLAP +L PIV+ RMP +  K E L +I+VY E+ML+LES A+
Sbjct: 61   QVLSRVHAALKSIFDLVPLAPMRLLPIVVQRMPTVHNKHERLKLIVVYTENMLKLESSAM 120

Query: 595  GELVGSEMLKELVYRLIELDVEIKWSHILRDDSSKGIFDMELEDVEETADDAENDGGEFP 774
            GELV S +L  +V RLI+LD+EI W  IL DD SKGIF+MELEDVEE ADDAE  G E P
Sbjct: 121  GELVRSTLLMAVVDRLIDLDMEIGWDDILHDDFSKGIFEMELEDVEEAADDAEQVGDELP 180

Query: 775  GESSSR-----TVVAEKLDSLMVLTFEHLKSCAVGGRLVKVFDILVESFRITVLNAYKSK 939
              S SR      ++AE LDSL+VLTFEHL+SC   GRL++VF+IL++SF+ITVLNAYKSK
Sbjct: 181  SGSISRKSLSGNLIAELLDSLLVLTFEHLESCEGTGRLIEVFEILLQSFQITVLNAYKSK 240

Query: 940  FAQFVMFYACSLDPEKCGVTFAVMLEDIFFSN-DPPNTRMSAVAYLASYLSRGKFLSPSL 1116
            FAQFVMFYAC+LDPE CG+ FA ML D+F S   PP TRMS+V+YLASYLSR +FLSP  
Sbjct: 241  FAQFVMFYACALDPENCGLRFATMLADVFVSGLYPPLTRMSSVSYLASYLSRARFLSPCF 300

Query: 1117 VVSSLKRLVDWCLSYCQAQGGGDINPKSHSVFYSGCQAIMYVLCFRMRSLIDVPRLKSEL 1296
            +VS LKRLVDWCL YC   GG +INPK+H VFYSGCQAIMYVLCFRMRS++DVPRLKS+L
Sbjct: 301  IVSLLKRLVDWCLEYCNIPGG-NINPKAHRVFYSGCQAIMYVLCFRMRSIMDVPRLKSQL 359

Query: 1297 LLMPIQLILKHPLNPLKVCFPCIVDEFLQQAKAAGLFTESAGTETFIFNEHLLVGSELSR 1476
            LLMP++ +LKH LNPLKVC P +V EFLQQ+KAA LFT S   ETFIFN+  L+ SELSR
Sbjct: 360  LLMPLETVLKHNLNPLKVCLPSVVSEFLQQSKAARLFTVS---ETFIFND--LLESELSR 414

Query: 1477 AFGG 1488
             FGG
Sbjct: 415  DFGG 418


>ref|XP_007134114.1| hypothetical protein PHAVU_010G020100g [Phaseolus vulgaris]
            gi|561007159|gb|ESW06108.1| hypothetical protein
            PHAVU_010G020100g [Phaseolus vulgaris]
          Length = 620

 Score =  528 bits (1360), Expect = e-147
 Identities = 287/503 (57%), Positives = 374/503 (74%), Gaps = 7/503 (1%)
 Frame = +1

Query: 1    MMEDVNVSDLELVHLVRDALISDPR-ESDSYGQLVEVLHRKVNLTPDDVALIVTTLKALS 177
            +ME+   SD +LV   R  L    + +  +Y +LV  LH K NL PD+VA++VTTL+ALS
Sbjct: 14   VMENGGYSDYQLVRHFRSVLEEVTKGDRGNYDELVGYLHPKKNLNPDEVAILVTTLRALS 73

Query: 178  GAVSCIDIDRHESLLSAIFGMSMWSYGPDVSDALAELIVSLASSSGKFLVSCLEMLVGHF 357
            GAV CID + HESLL A+  MS+W+YG +V DAL ELI+SLA+S+GK++  CLEMLV HF
Sbjct: 74   GAVCCIDPNHHESLLFAVSRMSLWNYGTEVMDALLELIISLAASNGKYIDWCLEMLVKHF 133

Query: 358  IPPKNVQDLLKQSRGLARKDRVLSQVHSALKDISDLVPLAPDKLCPIVLGRMPKMSQKEP 537
            +PP  + D L    G+ RK++VLS+VH+ALK+I+DLVPLAP +LCPIV+  MP +  KE 
Sbjct: 134  VPPFYLIDSLNNENGIDRKNKVLSRVHAALKEIADLVPLAPLRLCPIVVQNMPNVFSKER 193

Query: 538  LIVIMVYVESMLRLESGAIGELVGSEMLKELVYRLIELDVEIKWSHILRDDSSKGIFDME 717
             IVI  Y E+M +LE GAIGE+VG+ +L  LV RL+ELDVEI W  IL++D S+GIFDME
Sbjct: 194  EIVI--YFENMFKLEGGAIGEIVGATILPALVDRLLELDVEIGWDGILQED-SRGIFDME 250

Query: 718  LEDVEETADDAENDGGEFPGESSSR-----TVVAEKLDSLMVLTFEHLKSCAVGGRLVKV 882
            LED+ + AD+ +N       E  +R       V EKLDSL+VL   HL+SC   GRL +V
Sbjct: 251  LEDIIKLADEDDNCHNMPQSELLNRKNLQGNQVVEKLDSLIVLALLHLESCQSSGRLTEV 310

Query: 883  FDILVESFRITVLNAYKSKFAQFVMFYACSLDPEKCGVTFAVMLEDIFFSN-DPPNTRMS 1059
            FD+L+ SF+ TVLNAYKSKF QFVMFYAC+LDPE CGV FA++L D+F S+ +PP TRMS
Sbjct: 311  FDVLLPSFQKTVLNAYKSKFTQFVMFYACALDPEGCGVKFAMVLADMFASDLNPPITRMS 370

Query: 1060 AVAYLASYLSRGKFLSPSLVVSSLKRLVDWCLSYCQAQGGGDINPKSHSVFYSGCQAIMY 1239
            AVAYLASYLSR KFLS +LV + ++ LVD C +YC+ +   D+NP++H VFYSGCQAIMY
Sbjct: 371  AVAYLASYLSRAKFLSAALVTTIIQSLVDLCYAYCKFR-DSDLNPRAHQVFYSGCQAIMY 429

Query: 1240 VLCFRMRSLIDVPRLKSELLLMPIQLILKHPLNPLKVCFPCIVDEFLQQAKAAGLFTESA 1419
            ++CFRM+SL+DVPRLK +LL MP++ I KH L+PLKVC P +V EFL+QAKAA LF  S 
Sbjct: 430  IMCFRMKSLMDVPRLKLQLLNMPMEAIWKHKLSPLKVCLPTVVVEFLRQAKAAKLFMAS- 488

Query: 1420 GTETFIFNEHLLVGSELSRAFGG 1488
              E+F+F++  ++ S+LS+AFGG
Sbjct: 489  --ESFVFDD--MLESDLSKAFGG 507


>ref|XP_002524432.1| transcription initiation factor ia, putative [Ricinus communis]
            gi|223536316|gb|EEF37967.1| transcription initiation
            factor ia, putative [Ricinus communis]
          Length = 640

 Score =  524 bits (1349), Expect = e-146
 Identities = 291/513 (56%), Positives = 371/513 (72%), Gaps = 18/513 (3%)
 Frame = +1

Query: 4    MED--VNVSDLELVHLVRDALIS-DPRESDSYGQLVEVLHRKVNLTPDDVALIVTTLKAL 174
            MED  VN +D +LV+ VRDAL S    +++SY QLV V+H    LTPDDVAL++T+LKAL
Sbjct: 16   MEDDGVNYTDSDLVYHVRDALHSVQYGDTNSYDQLVGVMHHSQRLTPDDVALLLTSLKAL 75

Query: 175  SGAVSCIDIDRHESLLSAIFGMSMWSYGPDVSDALAELIVSLASSSGKFLVSCLEMLVGH 354
            SGAVS ID   H+ LL +IFGMS+W+YGPDV +AL ELI++LA+S+GK++  CL+MLV +
Sbjct: 76   SGAVSYIDECHHDRLLQSIFGMSIWNYGPDVMEALLELIIALAASNGKYIDPCLKMLVTN 135

Query: 355  FIPPKNVQDLLKQSRGLARKDRVLSQVHSALKDISDLVPLAPDKLCPIVLG---RMPKMS 525
            F+PP  + D+LK  RG A+K++VLS++H+AL+DI+ L+P+A  +L   V+    R+P   
Sbjct: 136  FVPPMYLIDILKLPRGQAKKEQVLSRLHTALEDIAHLIPMAASRLSTEVVSEIQRIPTTF 195

Query: 526  QKEPL-------IVIMVYVESMLRLESGAIGELVGSEMLKELVYRLIELDVEIKWSHILR 684
            +K+             +YVE+MLRLESGAI E VGS ML  +V +LI+LDV I W  ILR
Sbjct: 196  KKDQYHEKDRVKYRTEIYVENMLRLESGAIREFVGSRMLMAVVDKLIDLDVAIGWDDILR 255

Query: 685  DDSSKGIFDMELEDVEETADDAE-NDGGEFP----GESSSRTVVAEKLDSLMVLTFEHLK 849
            DDS KGIF +ELED +E +DD E ND GE P     +S    V A+ LDSLMV  FEHL+
Sbjct: 256  DDSCKGIFAIELEDADEVSDDDEYNDYGELPRTLSHKSLGENVAADLLDSLMVRIFEHLE 315

Query: 850  SCAVGGRLVKVFDILVESFRITVLNAYKSKFAQFVMFYACSLDPEKCGVTFAVMLEDIFF 1029
             CA   RL  VF+ L++SF +T+LN YKSKFAQFVMFYAC+LDPE CGV FA  L D F 
Sbjct: 316  LCANNKRLNDVFETLLDSFMLTILNTYKSKFAQFVMFYACALDPENCGVEFAERLRDRFT 375

Query: 1030 SNDPPNTRMSAVAYLASYLSRGKFLSPSLVVSSLKRLVDWCLSYCQAQGGGDINPKSHSV 1209
              + P TRMSAVAYLASYL+R KFL  + V S+LKRLVDWC  YC+ Q  GD+NPK+H V
Sbjct: 376  YGENPLTRMSAVAYLASYLARAKFLPIAFVASTLKRLVDWCSEYCRNQ-DGDMNPKAHRV 434

Query: 1210 FYSGCQAIMYVLCFRMRSLIDVPRLKSELLLMPIQLILKHPLNPLKVCFPCIVDEFLQQA 1389
            FYSGCQAI+YVLCFRM S++D+P LKS+LL MP++ I+KH L PLKVC P IV+EFL+QA
Sbjct: 435  FYSGCQAILYVLCFRMSSMMDIPWLKSQLLHMPLEQIMKHKLGPLKVCLPSIVEEFLKQA 494

Query: 1390 KAAGLFTESAGTETFIFNEHLLVGSELSRAFGG 1488
            KAA LFT S   +T  F +  ++ SE S+ FGG
Sbjct: 495  KAAHLFTTS---QTSSFED--VLESEFSKDFGG 522


>ref|XP_004508346.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like isoform X1 [Cicer arietinum]
            gi|502151248|ref|XP_004508347.1| PREDICTED: RNA
            polymerase I-specific transcription initiation factor
            RRN3-like isoform X2 [Cicer arietinum]
            gi|502151250|ref|XP_004508348.1| PREDICTED: RNA
            polymerase I-specific transcription initiation factor
            RRN3-like isoform X3 [Cicer arietinum]
          Length = 620

 Score =  518 bits (1334), Expect = e-144
 Identities = 287/505 (56%), Positives = 375/505 (74%), Gaps = 10/505 (1%)
 Frame = +1

Query: 4    MEDVNVSDLELVHLVRDALISDPRE-SDSYGQLVEVLHRKVNLTPDDVALIVTTLKALSG 180
            ME  +VSDL+L++ VRD L+       ++Y +LV  LH K N + ++ A +VTTL+ LSG
Sbjct: 16   METTDVSDLQLIYSVRDTLVEVTLGVRENYDELVRYLHPKRNPSAEEFAALVTTLRGLSG 75

Query: 181  AVSCIDIDRHESLLSAIFGMSMWSYGPDVSDALAELIVSLASSSGKFLVSCLEMLVGHFI 360
            AVS ID   H++LL A+  +S+W+Y   V DAL ELIVSLA S+G ++  CLEMLV HF+
Sbjct: 76   AVSYIDPAHHDALLFALSRLSLWNYATVVMDALLELIVSLAVSNGMYIDWCLEMLVKHFV 135

Query: 361  PPKNVQDLLKQSRGLARKDRVLSQVHSALKDISDLVPLAPDKLCPIVLGRMP---KMSQK 531
            PP  + D LK++ G+ +K++VLS+VH+AL+ ISDLVPLAP +L PIV+ +MP   KMS+ 
Sbjct: 136  PPIYLFDFLKETNGIEKKNKVLSRVHAALEQISDLVPLAPLRLSPIVVQKMPKSCKMSEP 195

Query: 532  EPLIVIMVYVESMLRLESGAIGELVGSEMLKELVYRLIELDVEIKWSHILRDDSSKGIFD 711
            E    I++YVE+MLRLESGAIGE+VG  ML  LV RLIELDV I W   L++D  K IF+
Sbjct: 196  E----IVMYVENMLRLESGAIGEIVGGTMLPALVDRLIELDVGIGWDGNLQED-VKCIFE 250

Query: 712  MELEDVEETADDAENDGGEFPGESSSR-----TVVAEKLDSLMVLTFEHLKSCAVGGRLV 876
            +ELE++ E AD+ EN       +  +R       VAE+LDSL+VL F HL+SC   GR+ 
Sbjct: 251  LELEEIAEFADEDENIFNMSTTDMLNRNNLQGNKVAEQLDSLIVLIFLHLESCQSSGRIA 310

Query: 877  KVFDILVESFRITVLNAYKSKFAQFVMFYACSLDPEKCGVTFAVMLEDIFFSN-DPPNTR 1053
            +VFDIL++SF  TVLNAYKSKF QFVMFYAC+LDPE CGV FA++L ++F S+ +PP TR
Sbjct: 311  EVFDILLKSFERTVLNAYKSKFTQFVMFYACALDPEGCGVKFAMVLTEMFGSDVNPPITR 370

Query: 1054 MSAVAYLASYLSRGKFLSPSLVVSSLKRLVDWCLSYCQAQGGGDINPKSHSVFYSGCQAI 1233
            MSAVAYLASYLSR KFLS +LV S ++RLVDWC SYC      D+NP++H VFYSGCQAI
Sbjct: 371  MSAVAYLASYLSRAKFLSSALVASVIQRLVDWCFSYCMLH-DVDMNPQAHQVFYSGCQAI 429

Query: 1234 MYVLCFRMRSLIDVPRLKSELLLMPIQLILKHPLNPLKVCFPCIVDEFLQQAKAAGLFTE 1413
            MY+LCFRMRSL+DVPRL+ +L+ MP++ +LKH L+PLKVC P +V+EFL+QAKAA LF  
Sbjct: 430  MYLLCFRMRSLVDVPRLRMQLIKMPLEPMLKHKLSPLKVCLPSVVEEFLRQAKAARLFMT 489

Query: 1414 SAGTETFIFNEHLLVGSELSRAFGG 1488
            S   E+F+FN+  L+ S+LS+AFGG
Sbjct: 490  S---ESFVFND--LLESDLSKAFGG 509


>ref|XP_002307198.2| RNA polymerase 1 specific transcription initiation factor RRN3 family
            protein [Populus trichocarpa] gi|550338523|gb|EEE94194.2|
            RNA polymerase 1 specific transcription initiation factor
            RRN3 family protein [Populus trichocarpa]
          Length = 637

 Score =  502 bits (1292), Expect = e-139
 Identities = 281/506 (55%), Positives = 361/506 (71%), Gaps = 12/506 (2%)
 Frame = +1

Query: 7    EDVNVSDLELVHLVRDALIS-DPRESDSYGQLVEVLHRKVNLTPDDVALIVTTLKALSGA 183
            E V+++D +LV+ VRDAL+S    +  SY QLV VLH +    PD VAL++T+LKALSGA
Sbjct: 23   EGVSITDWDLVYHVRDALLSVKTGDRSSYHQLVGVLHHRDRSAPDKVALLLTSLKALSGA 82

Query: 184  VSCIDIDRHESLLSAIFGMSMWSYGPDVSDALAELIVSLASSSGKFLVSCLEMLVGHFIP 363
            VS I+   H SLL +IFGMSMW+  PDV DAL ELI+ LA+S+GK++  CL+MLV +F+P
Sbjct: 83   VSYINDVDHVSLLQSIFGMSMWNCAPDVMDALLELIICLAASNGKYVDLCLDMLVNNFMP 142

Query: 364  PKNVQDLLKQSRGLARKDRVLSQVHSALKDISDLVPLAPDKLCPIVLGRMPKMSQKEPLI 543
            P    D+L+  RG A+KD+VL +VH+ L+ I DLVPLA  KL   V+ + P   +K+  +
Sbjct: 143  PME-SDMLRHPRGQAKKDQVLPRVHTGLEVIVDLVPLAALKLSTNVVQKRPMFFRKDFNM 201

Query: 544  VIM-----VYVESMLRLESGAIGELVGSEMLKELVYRLIELDVEIKWSHILRDDSSKGIF 708
              +     +Y+++ML LE GAI E VG  ML E+V  ++ELDV I W  +LRDD SKGIF
Sbjct: 202  DRLKCRMEIYLKNMLMLEGGAIREFVGHSMLVEVVNMMLELDVAIGWDELLRDDPSKGIF 261

Query: 709  DMELEDVEETA-DDAENDGGEFPGESSSRT----VVAEKLDSLMVLTFEHLKSCAVGGRL 873
             MELED EE A DD + + GE P   + R     V A+ LDSLM+   EHL++CA   RL
Sbjct: 262  TMELEDEEEEAGDDGQANDGELPSTLTLRNLGKNVTADLLDSLMIQFLEHLEACADKKRL 321

Query: 874  VKVFDILVESFRITVLNAYKSKFAQFVMFYACSLDPEKCGVTFAVMLEDIFFSN-DPPNT 1050
             +VF+ L+ SF  T+LN YKSKF+QF +FYAC+LDPE CGV FA  L D+F S  +PP T
Sbjct: 322  SEVFETLLSSFMATILNTYKSKFSQFTIFYACALDPENCGVKFAQTLVDLFISTCNPPVT 381

Query: 1051 RMSAVAYLASYLSRGKFLSPSLVVSSLKRLVDWCLSYCQAQGGGDINPKSHSVFYSGCQA 1230
            RMSAVAYL+SYL+RGKFLS + V++ LKRLVDWCL YC+ Q   D+NPK+H VFYS CQ 
Sbjct: 382  RMSAVAYLSSYLARGKFLSAAFVMNMLKRLVDWCLRYCEEQDS-DMNPKAHQVFYSACQG 440

Query: 1231 IMYVLCFRMRSLIDVPRLKSELLLMPIQLILKHPLNPLKVCFPCIVDEFLQQAKAAGLFT 1410
            IMYVLCF M+S+++VP LKS+LLLMPI+ ILKH L PL+VC P IV+EFL+QAKAA LFT
Sbjct: 441  IMYVLCFHMKSIMNVPTLKSQLLLMPIEPILKHKLGPLEVCLPSIVNEFLKQAKAAHLFT 500

Query: 1411 ESAGTETFIFNEHLLVGSELSRAFGG 1488
             S   + FIF +  L+ S+LSR FGG
Sbjct: 501  IS---KAFIFED--LLESDLSRDFGG 521


>ref|XP_007204094.1| hypothetical protein PRUPE_ppa002914mg [Prunus persica]
            gi|462399625|gb|EMJ05293.1| hypothetical protein
            PRUPE_ppa002914mg [Prunus persica]
          Length = 622

 Score =  494 bits (1272), Expect = e-137
 Identities = 281/502 (55%), Positives = 362/502 (72%), Gaps = 7/502 (1%)
 Frame = +1

Query: 4    MEDVNVSDLELVHLVRDALIS-DPRESDSYGQLVEVLHRKVNLTPDDVALIVTTLKALSG 180
            M D ++ D  LV+  RD L S    +++ Y QL+  ++ +  L  ++VA++VT LKAL+G
Sbjct: 15   MGDHDLIDSYLVYRARDTLCSVSSGDTEDYRQLLSAMNPE-ELGANEVAMLVTNLKALAG 73

Query: 181  AVSCIDIDRHESLLSAIFGMSMWSYGPDVSDALAELIVSLASSSGKFLVSCLEMLVGHFI 360
            AV+ ID   H  LLSAIF MS+W+Y PDV DAL E I SLA+SSGK++  CL ML   F 
Sbjct: 74   AVAYIDNVLHNELLSAIFKMSLWNYKPDVMDALIEFIESLATSSGKYVDDCLAMLTCQFF 133

Query: 361  PPKNVQDLLKQSRGLARKDRVLSQVHSALKDISDLVPLAPDKLCPIVLGRMPKMS-QKEP 537
            PP +    L   + LARKD VLS+VHS+LK I+DLVPL+P +L PIVL   P+       
Sbjct: 134  PPGS----LPLPKILARKDGVLSRVHSSLKYIADLVPLSPVRLVPIVLDGKPQYRFNNTS 189

Query: 538  LIVIMVYVESMLRLESGAIGELVGSEMLKELVYRLIELDVEIKWSHILRDDSSKGIFDME 717
             + +++YVE+ML+LESG +GE+V   ML  +V  L++LDVEI W  I ++DSSKGIF+ME
Sbjct: 190  TLSLVIYVENMLKLESGVLGEVVRIPMLAGVVDLLLDLDVEIGWEDI-KNDSSKGIFEME 248

Query: 718  LEDVEETADDAENDGGEFPGESSSRTV----VAEKLDSLMVLTFEHLKSCAVGGRLVKVF 885
            LEDV+E+ DD  ND  E P + S +T+     AEKLDSLMVLTFEHL+SC V  RL+++F
Sbjct: 249  LEDVDESRDDDLNDDSELPRQLSRKTLGGNSFAEKLDSLMVLTFEHLESCQVADRLIEIF 308

Query: 886  DILVESFRITVLNAYKSKFAQFVMFYACSLDPEKCGVTFAVMLE-DIFFSNDPPNTRMSA 1062
            D L+ESF+ TVL AYKSKFAQFV+FYACSLDP+ CGVTFA+MLE   FFS +PP  RMSA
Sbjct: 309  DTLLESFKKTVLTAYKSKFAQFVIFYACSLDPKNCGVTFALMLEHTFFFSTNPPLLRMSA 368

Query: 1063 VAYLASYLSRGKFLSPSLVVSSLKRLVDWCLSYCQAQGGGDINPKSHSVFYSGCQAIMYV 1242
            VAYLASYLSR KFLS  +V  +L+RLVDWC+ Y + Q   +INP++H +FYSGCQAIMY+
Sbjct: 369  VAYLASYLSRAKFLSVFVVAGTLERLVDWCVKYVKMQ-DDEINPEAHRIFYSGCQAIMYL 427

Query: 1243 LCFRMRSLIDVPRLKSELLLMPIQLILKHPLNPLKVCFPCIVDEFLQQAKAAGLFTESAG 1422
            LCFRMRS++D P+LK  L+ +P++ IL + L+PLKVC P IV EFL+QAKAA LF  S  
Sbjct: 428  LCFRMRSMMDDPQLKPWLVRLPLESILNNKLSPLKVCLPSIVLEFLRQAKAARLFMTS-- 485

Query: 1423 TETFIFNEHLLVGSELSRAFGG 1488
             E F F+++L   SELSR FGG
Sbjct: 486  -EKFNFDDYL--ESELSREFGG 504


>ref|XP_002881355.1| RNA polymerase I specific transcription initiation factor RRN3 family
            protein [Arabidopsis lyrata subsp. lyrata]
            gi|297327194|gb|EFH57614.1| RNA polymerase I specific
            transcription initiation factor RRN3 family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 614

 Score =  484 bits (1247), Expect = e-134
 Identities = 270/504 (53%), Positives = 357/504 (70%), Gaps = 9/504 (1%)
 Frame = +1

Query: 4    MEDVNVSDLELVHLVRDALIS-DPRESDSYGQLVEVLHRKVN--LTPDDVALIVTTLKAL 174
            +++V++SD +LV  VR+AL S    + D Y +LV V+++ +     PD VA + T LKAL
Sbjct: 19   VDNVDLSDTDLVQTVRNALTSVKTGDPDLYSELVGVINKDIKEFRDPDAVAQLETVLKAL 78

Query: 175  SGAVSCIDIDRHESLLSAIFGMSMWSYGPDVSDALAELIVSLASSSGKFLVSCLEMLVGH 354
            SG+V+CIDI  H+ LLS++FGM +W + P V DAL  L++SLA + GK+L  CL MLV +
Sbjct: 79   SGSVACIDIVHHQKLLSSLFGMKLWDHRPVVMDALVNLVISLAVTRGKYLDPCLNMLVSN 138

Query: 355  FIPPKNVQDLLKQSRGLARKDRVLSQVHSALKDISDLVPLAPDKLCPIVLGRMPKMSQKE 534
            F+PP +V + L   R L +K  VLS+VH+AL  IS LVPL P +L P++   MPK+ +K+
Sbjct: 139  FVPPPSVVNNLSHPRVLNKKIEVLSRVHAALLKISILVPLTPSRLVPMLFQEMPKIHKKD 198

Query: 535  PLIVIMVYVESMLRLESGAIGELVGSEMLKELVYRLIELDVEIKWSHILRDDSSKGIFDM 714
              IVI  YVES+L+LE+  IG++ GS +L  ++ RL +LD+EI W  I +DDSS+G+FDM
Sbjct: 199  HSIVI--YVESLLKLENSPIGQVGGSMILGVVMERLRDLDLEIGWDDIPQDDSSRGMFDM 256

Query: 715  ELEDVEETADDAENDGGEFP-----GESSSRTVVAEKLDSLMVLTFEHLKSCAVGGRLVK 879
            ELED  E      N+G E P      ++S  +VV++ LD LMV+ FEHL+SC   GRL +
Sbjct: 257  ELEDAVE---GTINEGDELPVGPLKQDTSDGSVVSKLLDKLMVVAFEHLESCQNDGRLDQ 313

Query: 880  VFDILVESFRITVLNAYKSKFAQFVMFYACSLDPEKCGVTFAVMLEDIFF-SNDPPNTRM 1056
            VFDIL+ESF   +LN YKSKF QF+MFYACSLDPE CGV FA  L +IF  SN  P+TRM
Sbjct: 314  VFDILLESFENFILNTYKSKFTQFLMFYACSLDPENCGVKFASKLVEIFLSSNKHPSTRM 373

Query: 1057 SAVAYLASYLSRGKFLSPSLVVSSLKRLVDWCLSYCQAQGGGDINPKSHSVFYSGCQAIM 1236
            SAVAYLAS+L+RGKFL  S V S LKRL+D C+ YC+     DI P+ H +F+SGCQAIM
Sbjct: 374  SAVAYLASFLARGKFLPVSFVASMLKRLIDECVGYCRT-CNDDIRPEEHQIFFSGCQAIM 432

Query: 1237 YVLCFRMRSLIDVPRLKSELLLMPIQLILKHPLNPLKVCFPCIVDEFLQQAKAAGLFTES 1416
            YVLCFRMRS++DVPR +S+  L P++ IL H LNPL+VC P +V EFL+QAKA GLF  S
Sbjct: 433  YVLCFRMRSILDVPRFRSQ--LTPLESILMHKLNPLRVCLPSVVAEFLRQAKAGGLFIVS 490

Query: 1417 AGTETFIFNEHLLVGSELSRAFGG 1488
               ++FIF++  L+ SELSRAFGG
Sbjct: 491  ---DSFIFDD--LLESELSRAFGG 509


>ref|NP_850236.1| RNA polymerase I specific transcription initiation factor RRN3
            protein [Arabidopsis thaliana] gi|20465617|gb|AAM20140.1|
            unknown protein [Arabidopsis thaliana]
            gi|23296957|gb|AAN13210.1| unknown protein [Arabidopsis
            thaliana] gi|330253924|gb|AEC09018.1| RNA polymerase I
            specific transcription initiation factor RRN3 protein
            [Arabidopsis thaliana]
          Length = 613

 Score =  479 bits (1232), Expect = e-132
 Identities = 269/504 (53%), Positives = 356/504 (70%), Gaps = 9/504 (1%)
 Frame = +1

Query: 4    MEDVNVSDLELVHLVRDALIS-DPRESDSYGQLVEVLHRKVN--LTPDDVALIVTTLKAL 174
            +++V++SD +LV  VR AL S    +SD Y ++V V+ R +     PD VA + T LKAL
Sbjct: 20   VDNVDLSDTQLVQTVRKALTSVKTGDSDLYSEMVGVMARDIKEFKDPDVVAQLETVLKAL 79

Query: 175  SGAVSCIDIDRHESLLSAIFGMSMWSYGPDVSDALAELIVSLASSSGKFLVSCLEMLVGH 354
            SGAV+CID+  H+ LLSA+F M +W + PDV DAL  L++SLA +SGK+L SCL MLV +
Sbjct: 80   SGAVACIDVLHHQKLLSALFRMKLWDHRPDVMDALVNLVISLAVTSGKYLDSCLNMLVSN 139

Query: 355  FIPPKNVQDLLKQSRGLARKDRVLSQVHSALKDISDLVPLAPDKLCPIVLGRMPKMSQKE 534
            F+PP  V + L  SR L +K  VLS+VH+AL  IS LVPL P +L P++  +MPKM +K+
Sbjct: 140  FVPPPWVVNNLSHSRILNKKIDVLSRVHAALLKISILVPLTPSRLVPMLFQQMPKMHKKD 199

Query: 535  PLIVIMVYVESMLRLESGAIGELVGSEMLKELVYRLIELDVEIKWSHILRDDSSKGIFDM 714
              IVI  YVES+L+LE+ +IG++ GS +L  ++ RL +LD+EI+W  I +DDSS+G+FDM
Sbjct: 200  HSIVI--YVESLLKLENSSIGQVGGSMILGMVMERLRDLDLEIEWDDIPQDDSSRGMFDM 257

Query: 715  ELEDVEETADDAENDGGEFP-----GESSSRTVVAEKLDSLMVLTFEHLKSCAVGGRLVK 879
            ELED    A+   NDG E P      ++S  ++V++ LD LMV+ FEHL+SC   GRL +
Sbjct: 258  ELED---AAEGTMNDGDELPVGPLKQDTSDGSIVSKLLDKLMVVAFEHLESCQNDGRLDQ 314

Query: 880  VFDILVESFRITVLNAYKSKFAQFVMFYACSLDPEKCGVTFAVMLEDIFF-SNDPPNTRM 1056
            VF+ L +SF   +LN YKSKF QF++FYACSLDPE CGV FA  L +IF  SN    TRM
Sbjct: 315  VFESLFKSFENFILNTYKSKFTQFLIFYACSLDPENCGVKFASKLVEIFLSSNKHVATRM 374

Query: 1057 SAVAYLASYLSRGKFLSPSLVVSSLKRLVDWCLSYCQAQGGGDINPKSHSVFYSGCQAIM 1236
            SAVAYLAS+L+RGKFL  S V S LKRL+D C+ YC+     D  P++H +F+SGCQAIM
Sbjct: 375  SAVAYLASFLARGKFLPVSFVASMLKRLIDECVGYCRT-CNDDTRPEAHQIFFSGCQAIM 433

Query: 1237 YVLCFRMRSLIDVPRLKSELLLMPIQLILKHPLNPLKVCFPCIVDEFLQQAKAAGLFTES 1416
            YVLCFRMRS++DVPR +S+  L P++ IL H LNPL VC P +V EFL+QAK  GLF  S
Sbjct: 434  YVLCFRMRSILDVPRFRSQ--LTPLESILMHKLNPLMVCLPSVVAEFLRQAKEGGLFIVS 491

Query: 1417 AGTETFIFNEHLLVGSELSRAFGG 1488
               ++FIF++  L+ SELSRAFGG
Sbjct: 492  ---DSFIFDD--LLESELSRAFGG 510