BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00005826
         (822 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]              201   3e-71
ref|XP_004295686.1| PREDICTED: uncharacterized mitochondrial pro...   185   3e-68
emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]   176   2e-59
gb|ACY72569.1| unknown [Oryza sativa Japonica Group]                  168   6e-59
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]   179   8e-59
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni...   167   8e-59
ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group] g...   167   8e-59
emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera]   166   8e-59
gb|AAB82754.1| retrofit [Oryza longistaminata]                        165   4e-58
gb|AAR88589.1| putative copia-like retrotransposon protein [Oryz...   167   4e-58
gb|EEC76475.1| hypothetical protein OsI_14210 [Oryza sativa Indi...   167   4e-58
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group...   162   7e-58
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p...   164   2e-57
emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]   160   2e-57
emb|CAN67546.1| hypothetical protein VITISV_027734 [Vitis vinifera]   173   3e-57
gb|ABA95366.1| retrotransposon protein, putative, Ty1-copia subc...   161   3e-57
emb|CAN69851.1| hypothetical protein VITISV_009554 [Vitis vinifera]   174   4e-57
emb|CAN63683.1| hypothetical protein VITISV_030301 [Vitis vinifera]   159   4e-57
emb|CAN67073.1| hypothetical protein VITISV_011746 [Vitis vinifera]   163   4e-57
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop...   164   6e-57

>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score =  201 bits (512), Expect(2) = 3e-71
 Identities = 98/155 (63%), Positives = 116/155 (74%)
 Frame = +3

Query: 144  LYKKLGRLFSMKDLGPLNFFLGLEVVSKSSGMTLTQTKYTLDLLHRTKFQEVKPISIPVR 323
            L   L  LFSMKDLG +++FLG+E V     + LTQ KY +DLL +TK  + +P   PV 
Sbjct: 1084 LIHNLNSLFSMKDLGSVHYFLGIETVYNGDHLHLTQHKYIVDLLKKTKLHDSRPYPTPVL 1143

Query: 324  SGKKLSLYDGDPLADPTEYRSVVGALQYLTLTRPDISFAVNQFCQFMHQPTTTHWTVVKR 503
            SGKKLS+YDG  L DP+EYRS+VGALQYLTLTRPDI +AVNQ CQFMH PT  HW  VKR
Sbjct: 1144 SGKKLSVYDGVKLEDPSEYRSIVGALQYLTLTRPDICYAVNQVCQFMHSPTNVHWVAVKR 1203

Query: 504  IPRYLKHTPDYGLLYKPGSLSLQAYSDADYAEDPD 608
            I RYLK+T ++GL+Y+PGS  L AYSDADYA DPD
Sbjct: 1204 ILRYLKYTLNHGLVYQPGSHKLVAYSDADYAGDPD 1238



 Score = 94.7 bits (234), Expect(2) = 3e-71
 Identities = 47/70 (67%), Positives = 53/70 (75%)
 Frame = +1

Query: 613  HSTGGFCIFLGSNLISWSAKKQRTVSRSSTEAEYRQLAYTAAEISWIRLLLQDLQVFLTP 792
            HSTGGFC          S+KK +TVSRSS EAEYRQLAYTAAE+SW+R L +DL VFL+ 
Sbjct: 1241 HSTGGFC----------SSKKHKTVSRSSAEAEYRQLAYTAAELSWLRSLFRDLNVFLSC 1290

Query: 793  PHIWCDNISS 822
            P IWCDNISS
Sbjct: 1291 PRIWCDNISS 1300


>ref|XP_004295686.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
           [Fragaria vesca subsp. vesca]
          Length = 261

 Score =  185 bits (469), Expect(2) = 3e-68
 Identities = 89/149 (59%), Positives = 110/149 (73%)
 Frame = +3

Query: 165 LFSMKDLGPLNFFLGLEVVSKSSGMTLTQTKYTLDLLHRTKFQEVKPISIPVRSGKKLSL 344
           +FSMKDLG +++FLG+E         LTQ KY +DLL RTK  +  P + P  +G+KLSL
Sbjct: 1   MFSMKDLGRIHYFLGIEATYDGPSPYLTQKKYIVDLLTRTKMLDANPCATPAATGQKLSL 60

Query: 345 YDGDPLADPTEYRSVVGALQYLTLTRPDISFAVNQFCQFMHQPTTTHWTVVKRIPRYLKH 524
           + G  L+DPTEYRSVVGALQYLTLTRPDIS++VNQ C+FMH PTT HW  VK I RYLK 
Sbjct: 61  HSGKKLSDPTEYRSVVGALQYLTLTRPDISYSVNQVCKFMHSPTTIHWIAVKPILRYLKF 120

Query: 525 TPDYGLLYKPGSLSLQAYSDADYAEDPDS 611
           + ++GL Y+P SL + AY DADYA DPD+
Sbjct: 121 SLNHGLKYQPSSLFISAYFDADYAGDPDN 149



 Score =  101 bits (251), Expect(2) = 3e-68
 Identities = 46/69 (66%), Positives = 55/69 (79%)
 Frame = +1

Query: 616 STGGFCIFLGSNLISWSAKKQRTVSRSSTEAEYRQLAYTAAEISWIRLLLQDLQVFLTPP 795
           STGG+C++LG NLISWS K  RTVSRS  EAEYRQLA+TAAEISW+R +  DL +FL  P
Sbjct: 152 STGGYCVYLGPNLISWSYKTHRTVSRSCAEAEYRQLAFTAAEISWLRSMFCDLSLFLQCP 211

Query: 796 HIWCDNISS 822
            IWCD +S+
Sbjct: 212 RIWCDYLSA 220


>emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]
          Length = 1172

 Score =  176 bits (446), Expect(2) = 2e-59
 Identities = 91/159 (57%), Positives = 112/159 (70%), Gaps = 8/159 (5%)
 Frame = +3

Query: 156  LGRLFSMKDLGPLNFFLGLEVVSKSSGMTLTQTKYTLDLLHRTKFQEVKPISIPVRSGKK 335
            L   FS+KDLG L++FLG+E+V  S G  L+Q +Y LDLL RT   E KP+  P+ SG K
Sbjct: 870  LANRFSLKDLGKLSYFLGVEIVPNSQGFLLSQRRYLLDLLARTHMSEAKPVQTPLPSGTK 929

Query: 336  LSLYDGDPLADPTEYRSVVGALQYLTLTRPDISFAVNQFCQFMHQPTTTHWTVVKRIPRY 515
            +SL+ GD L+DPTE+R+VVG+LQYL LTR DI+FA N+  QFMH PTT HWT+VKR+ RY
Sbjct: 930  ISLHSGDKLSDPTEFRAVVGSLQYLLLTRLDIAFAANKLSQFMHTPTTEHWTLVKRLLRY 989

Query: 516  LKHTPDYGL-LYKPGSLS-------LQAYSDADYAEDPD 608
            L  TPD+ L LY    LS       L AYSDAD+A DPD
Sbjct: 990  LCGTPDHSLQLYCDSPLSLHAFSDALHAYSDADWAGDPD 1028



 Score = 80.9 bits (198), Expect(2) = 2e-59
 Identities = 39/70 (55%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
 Frame = +1

Query: 616  STGGFCIFLGSNLISWSAKKQRTVSRSSTEAEYRQLAYTAAEISWIRLLLQDLQVFL-TP 792
            STG + ++LG N ISWS+KKQ+ ++RSSTEAEYR +A TAAE++W+  LL DL + L T 
Sbjct: 1032 STGAYIVYLGRNPISWSSKKQKNIARSSTEAEYRFVANTAAELNWVSSLLCDLGIQLPTC 1091

Query: 793  PHIWCDNISS 822
            P I+CDN+ +
Sbjct: 1092 PVIYCDNVGA 1101


>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
          Length = 1436

 Score =  168 bits (425), Expect(2) = 6e-59
 Identities = 84/158 (53%), Positives = 108/158 (68%), Gaps = 3/158 (1%)
 Frame = +3

Query: 144  LYKKLGRLFSMKDLGPLNFFLGLEVVSKSSGMTLTQTKYTLDLLHRTKFQEVKPISIPVR 323
            L K L + F++KDLG L++FLG+EV    +G+ LTQ KY  DLL R      KP+S P+ 
Sbjct: 1138 LLKDLNKEFALKDLGDLHYFLGIEVTKVPNGIVLTQEKYANDLLKRVNMSNCKPVSTPLS 1197

Query: 324  SGKKLSLYDGDPLA--DPTEYRSVVGALQYLTLTRPDISFAVNQFCQFMHQPTTTHWTVV 497
              +KL+LY+G PL   D T+YRS+VGALQYLTLTRPDI+++VN+ CQF+H PTT HWT V
Sbjct: 1198 VSEKLTLYEGSPLGPNDATQYRSIVGALQYLTLTRPDIAYSVNKVCQFLHAPTTDHWTAV 1257

Query: 498  KRIPRYLKHTPDYGL-LYKPGSLSLQAYSDADYAEDPD 608
            KRI RYL      GL ++K  S  +  YSDAD+A   D
Sbjct: 1258 KRILRYLNQCTSLGLNIHKSASTLVHGYSDADWAGSVD 1295



 Score = 87.0 bits (214), Expect(2) = 6e-59
 Identities = 41/70 (58%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
 Frame = +1

Query: 616  STGGFCIFLGSNLISWSAKKQRTVSRSSTEAEYRQLAYTAAEISWIRLLLQDLQV-FLTP 792
            STGGF +FLGSNL+SWSA+KQ TVSRSSTEAEY+ +A T AE+ W++ LL++L +     
Sbjct: 1299 STGGFAVFLGSNLVSWSARKQPTVSRSSTEAEYKAVANTTAELIWVQTLLRELGIDSPKA 1358

Query: 793  PHIWCDNISS 822
              IWCDN+ +
Sbjct: 1359 AKIWCDNLGA 1368


>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
          Length = 1432

 Score =  179 bits (453), Expect(2) = 8e-59
 Identities = 89/156 (57%), Positives = 112/156 (71%), Gaps = 1/156 (0%)
 Frame = +3

Query: 144  LYKKLGRLFSMKDLGPLNFFLGLEVVSKSSGMTLTQTKYTLDLLHRTKFQEVKPISIPVR 323
            L  KL  +F+++DLG L+FFLG+EV      MTL+QTKY  DLLHRT+  + KP + P  
Sbjct: 1098 LIAKLDSVFALRDLGQLSFFLGIEVSYNEGSMTLSQTKYISDLLHRTELFDTKPANTPGA 1157

Query: 324  SGKKLSLYDGDPLADPTEYRSVVGALQYLTLTRPDISFAVNQFCQFMHQPTTTHWTVVKR 503
             GK LS +DGDP+ D T YRSVVGALQY+TLTRPDI+FAVN+ CQFM QPTT HW  VKR
Sbjct: 1158 VGKNLSKFDGDPMTDVTHYRSVVGALQYVTLTRPDIAFAVNKACQFMQQPTTAHWLSVKR 1217

Query: 504  IPRYLKHTPDYGLLYKPGS-LSLQAYSDADYAEDPD 608
            I RYL+ T   GLL+ P S L+++ ++DAD+    D
Sbjct: 1218 ILRYLRGTMQDGLLFSPSSNLTIEGFTDADWGAHLD 1253



 Score = 75.9 bits (185), Expect(2) = 8e-59
 Identities = 36/70 (51%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
 Frame = +1

Query: 616  STGGFCIFLGSNLISWSAKKQRTVSRSSTEAEYRQLAYTAAEISWIRLLLQDLQVFLTP- 792
            S+ G+ ++LG NL+SWS+ KQ+ VSRSS E+EYR L +  AEI W++ LLQ+L V +   
Sbjct: 1257 SSSGYLVYLGGNLVSWSSTKQKVVSRSSAESEYRGLVFATAEIVWMQALLQELCVPIPAI 1316

Query: 793  PHIWCDNISS 822
            P +W DNIS+
Sbjct: 1317 PLLWYDNISA 1326


>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|108706314|gb|ABF94109.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1247

 Score =  167 bits (424), Expect(2) = 8e-59
 Identities = 88/158 (55%), Positives = 109/158 (68%), Gaps = 3/158 (1%)
 Frame = +3

Query: 144  LYKKLGRLFSMKDLGPLNFFLGLEVVSKSSGMTLTQTKYTLDLLHRTKFQEVKPISIPVR 323
            L + L + F++KDLG L++FLG+EV   S G+ LTQ KY  DLL R    + KP+S P+ 
Sbjct: 949  LLRDLQKEFALKDLGDLHYFLGIEVTKVSGGIVLTQDKYVNDLLRRVNMFDCKPVSTPLS 1008

Query: 324  SGKKLSLYDGDPLA--DPTEYRSVVGALQYLTLTRPDISFAVNQFCQFMHQPTTTHWTVV 497
            + +KLS+ +GDPL   D T YRSVVGALQYLTLTRPDI+F VN+ CQF+H PTT HW  V
Sbjct: 1009 TSEKLSINEGDPLGPNDATHYRSVVGALQYLTLTRPDIAFPVNKVCQFLHAPTTHHWAAV 1068

Query: 498  KRIPRYLKHTPDYGL-LYKPGSLSLQAYSDADYAEDPD 608
            KRI RYLK     GL L K  S+ + AYSDAD+A   D
Sbjct: 1069 KRILRYLKQCTRLGLKLSKSRSMLVSAYSDADWAGSLD 1106



 Score = 87.0 bits (214), Expect(2) = 8e-59
 Identities = 41/70 (58%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
 Frame = +1

Query: 616  STGGFCIFLGSNLISWSAKKQRTVSRSSTEAEYRQLAYTAAEISWIRLLLQDLQV-FLTP 792
            STGGF +FLG NL+SWSA+KQ TVSRSSTE+EY+ LA   AEI W++ LL +LQV   + 
Sbjct: 1110 STGGFAVFLGDNLVSWSARKQATVSRSSTESEYKALANATAEIMWVQTLLAELQVESPSM 1169

Query: 793  PHIWCDNISS 822
              +WCDN+ +
Sbjct: 1170 AKLWCDNLGA 1179


>ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group]
           gi|255678617|dbj|BAH94406.1| Os08g0544300 [Oryza sativa
           Japonica Group]
          Length = 821

 Score =  167 bits (424), Expect(2) = 8e-59
 Identities = 85/158 (53%), Positives = 113/158 (71%), Gaps = 3/158 (1%)
 Frame = +3

Query: 144 LYKKLGRLFSMKDLGPLNFFLGLEVVSKSSGMTLTQTKYTLDLLHRTKFQEVKPISIPVR 323
           L ++L + F++KDLG L++FLG+EV     G+ L+Q KY  DLL R    E KP+S P+ 
Sbjct: 517 LLQELSKDFALKDLGDLHYFLGIEVHKVKDGLMLSQEKYASDLLRRVGMYECKPVSTPLS 576

Query: 324 SGKKLSLYDGDPLA--DPTEYRSVVGALQYLTLTRPDISFAVNQFCQFMHQPTTTHWTVV 497
           + +KLS+ +G  L   D T+YRSVVGALQYLTLTRPDISF++N+ CQF+H PTTTHW  V
Sbjct: 577 TSEKLSVNEGTLLGPQDSTQYRSVVGALQYLTLTRPDISFSINKVCQFLHAPTTTHWAAV 636

Query: 498 KRIPRYLKHTPDYGLLY-KPGSLSLQAYSDADYAEDPD 608
           KRI RY+K+T D GL + +  SL +  +SDAD+A  PD
Sbjct: 637 KRILRYVKYTVDTGLKFCRNPSLLVSGFSDADWAGSPD 674



 Score = 87.0 bits (214), Expect(2) = 8e-59
 Identities = 42/70 (60%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
 Frame = +1

Query: 616 STGGFCIFLGSNLISWSAKKQRTVSRSSTEAEYRQLAYTAAEISWIRLLLQDLQV-FLTP 792
           STGGF +FLG NL+SWSA+KQ TVSRSSTEAEY+ LA   AEI W++ LLQ+L V     
Sbjct: 678 STGGFAVFLGPNLVSWSARKQATVSRSSTEAEYKALANATAEIMWVQTLLQELGVESPRA 737

Query: 793 PHIWCDNISS 822
             +WCDN+ +
Sbjct: 738 AKLWCDNLGA 747


>emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera]
          Length = 431

 Score =  166 bits (419), Expect(2) = 8e-59
 Identities = 84/156 (53%), Positives = 108/156 (69%), Gaps = 1/156 (0%)
 Frame = +3

Query: 144 LYKKLGRLFSMKDLGPLNFFLGLEVVSKSSGMTLTQTKYTLDLLHRTKFQEVKPISIPVR 323
           L   L   F++KDL PLNFFLG+EV++  S + L+Q KY  D L R    E K ++ P+ 
Sbjct: 24  LISSLNSCFALKDLSPLNFFLGIEVLNSRSSLHLSQAKYICDFLQRAGLSESKSMASPMA 83

Query: 324 SGKKLSLYDGDPLADPTEYRSVVGALQYLTLTRPDISFAVNQFCQFMHQPTTTHWTVVKR 503
           +G  LS+ DG  L DPT YRS+VGALQY T+TRPDI++ VN+ CQFMH PT+TH  VVKR
Sbjct: 84  AGPVLSIADGTRLEDPTLYRSLVGALQYCTITRPDIAYTVNKLCQFMHAPTSTHLQVVKR 143

Query: 504 IPRYLKHTPDYGLLYKP-GSLSLQAYSDADYAEDPD 608
           + RYLK +  YGL ++P  SL L AY+DAD+A  PD
Sbjct: 144 VLRYLKGSLFYGLSFQPSSSLDLIAYTDADWASCPD 179



 Score = 89.0 bits (219), Expect(2) = 8e-59
 Identities = 41/70 (58%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
 Frame = +1

Query: 616 STGGFCIFLGSNLISWSAKKQRTVSRSSTEAEYRQLAYTAAEISWIRLLLQDLQV-FLTP 792
           ST G+CIF G NL+SWSA KQ+ VSRSSTE+EYR LA  AAE++WI+ LL++L +    P
Sbjct: 183 STSGYCIFFGGNLVSWSASKQKVVSRSSTESEYRGLANAAAELTWIQSLLKELFIPLFQP 242

Query: 793 PHIWCDNISS 822
           P ++CDN+S+
Sbjct: 243 PVLYCDNLST 252


>gb|AAB82754.1| retrofit [Oryza longistaminata]
          Length = 1445

 Score =  165 bits (418), Expect(2) = 4e-58
 Identities = 83/158 (52%), Positives = 108/158 (68%), Gaps = 3/158 (1%)
 Frame = +3

Query: 144  LYKKLGRLFSMKDLGPLNFFLGLEVVSKSSGMTLTQTKYTLDLLHRTKFQEVKPISIPVR 323
            L K L + F++KDLG L++FLG+EV   S+G+ LTQ KY  DLL R      KP+S P+ 
Sbjct: 1147 LLKDLNKEFALKDLGDLHYFLGIEVTKVSNGVILTQEKYANDLLKRVNMSNCKPVSTPLS 1206

Query: 324  SGKKLSLYDGDPLA--DPTEYRSVVGALQYLTLTRPDISFAVNQFCQFMHQPTTTHWTVV 497
              +KL+LY+G PL   D  +YRS+VGALQYLTLTRPDI+++VN+ CQF+H PTT+HW  V
Sbjct: 1207 VSEKLTLYEGSPLGPNDAIQYRSIVGALQYLTLTRPDIAYSVNKVCQFLHAPTTSHWIAV 1266

Query: 498  KRIPRYLKHTPDYGL-LYKPGSLSLQAYSDADYAEDPD 608
            KRI RYL      GL ++K  S  +  YSDAD+A   D
Sbjct: 1267 KRILRYLNQCTSLGLHIHKSASTLVHGYSDADWAGSID 1304



 Score = 87.0 bits (214), Expect(2) = 4e-58
 Identities = 41/70 (58%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
 Frame = +1

Query: 616  STGGFCIFLGSNLISWSAKKQRTVSRSSTEAEYRQLAYTAAEISWIRLLLQDLQV-FLTP 792
            STGGF +FLGSNL+SWSA+KQ TVSRSSTEAEY+ +A T AE+ W++ LL++L +     
Sbjct: 1308 STGGFAVFLGSNLVSWSARKQPTVSRSSTEAEYKAVANTTAELIWVQTLLKELGIESPKA 1367

Query: 793  PHIWCDNISS 822
              IWCDN+ +
Sbjct: 1368 AKIWCDNLGA 1377


>gb|AAR88589.1| putative copia-like retrotransposon protein [Oryza sativa Japonica
            Group]
          Length = 1399

 Score =  167 bits (424), Expect(2) = 4e-58
 Identities = 85/158 (53%), Positives = 113/158 (71%), Gaps = 3/158 (1%)
 Frame = +3

Query: 144  LYKKLGRLFSMKDLGPLNFFLGLEVVSKSSGMTLTQTKYTLDLLHRTKFQEVKPISIPVR 323
            L ++L + F++KDLG L++FLG+EV     G+ L+Q KY  DLL R    E KP+S P+ 
Sbjct: 1095 LLQELSKDFALKDLGDLHYFLGIEVHKVKDGLMLSQEKYASDLLRRVGMYECKPVSTPLS 1154

Query: 324  SGKKLSLYDGDPLA--DPTEYRSVVGALQYLTLTRPDISFAVNQFCQFMHQPTTTHWTVV 497
            + +KLS+ +G  L   D T+YRSVVGALQYLTLTRPDISF++N+ CQF+H PTTTHW  V
Sbjct: 1155 TSEKLSVNEGTLLGPQDSTQYRSVVGALQYLTLTRPDISFSINKVCQFLHAPTTTHWAAV 1214

Query: 498  KRIPRYLKHTPDYGLLY-KPGSLSLQAYSDADYAEDPD 608
            KRI RY+K+T D GL + +  SL +  +SDAD+A  PD
Sbjct: 1215 KRILRYVKYTVDTGLKFCRNPSLLVSGFSDADWAGSPD 1252



 Score = 84.7 bits (208), Expect(2) = 4e-58
 Identities = 41/70 (58%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
 Frame = +1

Query: 616  STGGFCIFLGSNLISWSAKKQRTVSRSSTEAEYRQLAYTAAEISWIRLLLQDLQV-FLTP 792
            STGGF +FLG NL+SWSA+KQ TVSRSS EAEY+ LA   AEI W++ LLQ+L V     
Sbjct: 1256 STGGFAVFLGPNLVSWSARKQATVSRSSIEAEYKALANATAEIMWVQTLLQELGVESPRA 1315

Query: 793  PHIWCDNISS 822
              +WCDN+ +
Sbjct: 1316 AKLWCDNLGA 1325


>gb|EEC76475.1| hypothetical protein OsI_14210 [Oryza sativa Indica Group]
          Length = 391

 Score =  167 bits (424), Expect(2) = 4e-58
 Identities = 85/158 (53%), Positives = 113/158 (71%), Gaps = 3/158 (1%)
 Frame = +3

Query: 144 LYKKLGRLFSMKDLGPLNFFLGLEVVSKSSGMTLTQTKYTLDLLHRTKFQEVKPISIPVR 323
           L ++L + F++KDLG L++FLG+EV     G+ L+Q KY  DLL R    E KP+S P+ 
Sbjct: 87  LLQELSKDFALKDLGDLHYFLGIEVHKVKDGLMLSQEKYASDLLRRVGMYECKPVSTPLS 146

Query: 324 SGKKLSLYDGDPLA--DPTEYRSVVGALQYLTLTRPDISFAVNQFCQFMHQPTTTHWTVV 497
           + +KLS+ +G  L   D T+YRSVVGALQYLTLTRPDISF++N+ CQF+H PTTTHW  V
Sbjct: 147 TSEKLSVNEGTLLGPQDSTQYRSVVGALQYLTLTRPDISFSINKVCQFLHAPTTTHWAAV 206

Query: 498 KRIPRYLKHTPDYGLLY-KPGSLSLQAYSDADYAEDPD 608
           KRI RY+K+T D GL + +  SL +  +SDAD+A  PD
Sbjct: 207 KRILRYVKYTVDTGLKFCRNPSLLVSGFSDADWAGSPD 244



 Score = 84.7 bits (208), Expect(2) = 4e-58
 Identities = 41/70 (58%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
 Frame = +1

Query: 616 STGGFCIFLGSNLISWSAKKQRTVSRSSTEAEYRQLAYTAAEISWIRLLLQDLQV-FLTP 792
           STGGF +FLG NL+SWSA+KQ TVSRSS EAEY+ LA   AEI W++ LLQ+L V     
Sbjct: 248 STGGFAVFLGPNLVSWSARKQATVSRSSIEAEYKALANATAEIMWVQTLLQELGVESPRA 307

Query: 793 PHIWCDNISS 822
             +WCDN+ +
Sbjct: 308 AKLWCDNLGA 317


>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1431

 Score =  162 bits (411), Expect(2) = 7e-58
 Identities = 80/154 (51%), Positives = 109/154 (70%), Gaps = 3/154 (1%)
 Frame = +3

Query: 144  LYKKLGRLFSMKDLGPLNFFLGLEVVSKSSGMTLTQTKYTLDLLHRTKFQEVKPISIPVR 323
            L K L + F++KDLG L++FLG+EV   ++G+ LTQ KY +D+L R    + K ++ P+ 
Sbjct: 1132 LLKNLNQEFALKDLGRLHYFLGIEVKEVNNGIVLTQEKYAMDVLKRVNMSDCKAVNTPLS 1191

Query: 324  SGKKLSLYDGDPLA--DPTEYRSVVGALQYLTLTRPDISFAVNQFCQFMHQPTTTHWTVV 497
              +KLS ++G+P    D T YRS+VGALQYLTLTRPD+SF+VN+ CQ++H PTT HW   
Sbjct: 1192 ISEKLSAHEGNPFGPEDSTRYRSLVGALQYLTLTRPDLSFSVNKVCQYLHAPTTKHWAAA 1251

Query: 498  KRIPRYLKHTPDYGL-LYKPGSLSLQAYSDADYA 596
            KRI RYLKHT   GL + K  SL + A+SDAD+A
Sbjct: 1252 KRILRYLKHTVKLGLKISKSNSLLVSAFSDADWA 1285



 Score = 89.0 bits (219), Expect(2) = 7e-58
 Identities = 42/71 (59%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
 Frame = +1

Query: 613  HSTGGFCIFLGSNLISWSAKKQRTVSRSSTEAEYRQLAYTAAEISWIRLLLQDLQVFLTP 792
            HSTGGF +F+G NL+SWSA+KQ TVSRSSTEAEY+ LA   AEI WI+ LL +L +    
Sbjct: 1292 HSTGGFAVFIGPNLVSWSARKQATVSRSSTEAEYKALANVTAEIMWIQTLLHELGIQAPK 1351

Query: 793  -PHIWCDNISS 822
               +WCDNI +
Sbjct: 1352 IAKVWCDNIGA 1362


>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
            sativa Japonica Group]
          Length = 1448

 Score =  164 bits (416), Expect(2) = 2e-57
 Identities = 83/158 (52%), Positives = 108/158 (68%), Gaps = 3/158 (1%)
 Frame = +3

Query: 144  LYKKLGRLFSMKDLGPLNFFLGLEVVSKSSGMTLTQTKYTLDLLHRTKFQEVKPISIPVR 323
            L K L + F++KDLG L++FLG+EV   S+G+ LTQ KY  D+L R      KP+S P+ 
Sbjct: 1150 LLKDLNKEFTLKDLGDLHYFLGIEVTKVSNGVILTQEKYANDMLKRVNMSNCKPVSTPLS 1209

Query: 324  SGKKLSLYDGDPLA--DPTEYRSVVGALQYLTLTRPDISFAVNQFCQFMHQPTTTHWTVV 497
              +KL+LY+G PL   D T+YRS+VGALQYLTLTRPDI+++VN+ CQF+H PTT+HW  V
Sbjct: 1210 VSEKLTLYEGSPLGPNDATQYRSIVGALQYLTLTRPDIAYSVNKVCQFLHAPTTSHWIAV 1269

Query: 498  KRIPRYLKHTPDYGL-LYKPGSLSLQAYSDADYAEDPD 608
            KRI RYL      GL ++K  S  +  YSDAD A   D
Sbjct: 1270 KRILRYLNQCTSLGLHVHKSASTLVHGYSDADGAGSID 1307



 Score = 85.9 bits (211), Expect(2) = 2e-57
 Identities = 40/70 (57%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
 Frame = +1

Query: 616  STGGFCIFLGSNLISWSAKKQRTVSRSSTEAEYRQLAYTAAEISWIRLLLQDLQV-FLTP 792
            STGGF +FLGSNL+SWSA+KQ TVSRSSTEAEY+ +A T AE+ W++ +L++L +     
Sbjct: 1311 STGGFAVFLGSNLVSWSARKQPTVSRSSTEAEYKAVANTTAELIWVQTVLKELGIESPKA 1370

Query: 793  PHIWCDNISS 822
              IWCDN+ +
Sbjct: 1371 AKIWCDNLGA 1380


>emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]
          Length = 1434

 Score =  160 bits (405), Expect(2) = 2e-57
 Identities = 81/148 (54%), Positives = 104/148 (70%), Gaps = 1/148 (0%)
 Frame = +3

Query: 168  FSMKDLGPLNFFLGLEVVSKSSGMTLTQTKYTLDLLHRTKFQEVKPISIPVRSGKKLSLY 347
            F+++DLGPL++FLG++     S + L Q KY  DLL+RT+ +  KP   P R G+ LS  
Sbjct: 1077 FALRDLGPLSYFLGIQAQQLGSVLHLNQHKYIADLLNRTQMETSKPAPTPGRLGRTLSQS 1136

Query: 348  DGDPLADPTEYRSVVGALQYLTLTRPDISFAVNQFCQFMHQPTTTHWTVVKRIPRYLKHT 527
            DG  L+DP+EYR  VGALQY+TLTRPDI+FAVN+ CQFM +P+  HW  VKRI RYLK T
Sbjct: 1137 DGMSLSDPSEYRRTVGALQYVTLTRPDIAFAVNKACQFMAKPSDVHWMAVKRILRYLKGT 1196

Query: 528  PDYGLLYKP-GSLSLQAYSDADYAEDPD 608
               GL ++P  S+ LQ YSDAD+A  PD
Sbjct: 1197 IHLGLHFQPAASMELQGYSDADWASCPD 1224



 Score = 89.7 bits (221), Expect(2) = 2e-57
 Identities = 41/69 (59%), Positives = 53/69 (76%)
 Frame = +1

Query: 616  STGGFCIFLGSNLISWSAKKQRTVSRSSTEAEYRQLAYTAAEISWIRLLLQDLQVFLTPP 795
            ST G+C+FLGSNLISWS+ KQR VS+SS E+EYR L    AE+ WI+ LLQ+L +  +PP
Sbjct: 1228 STSGYCVFLGSNLISWSSSKQRLVSKSSAESEYRGLVSLTAELVWIQSLLQELCLPTSPP 1287

Query: 796  HIWCDNISS 822
             +WCDN S+
Sbjct: 1288 ILWCDNQSA 1296


>emb|CAN67546.1| hypothetical protein VITISV_027734 [Vitis vinifera]
          Length = 1635

 Score =  173 bits (439), Expect(2) = 3e-57
 Identities = 85/156 (54%), Positives = 111/156 (71%), Gaps = 1/156 (0%)
 Frame = +3

Query: 144  LYKKLGRLFSMKDLGPLNFFLGLEVVSKSSGMTLTQTKYTLDLLHRTKFQEVKPISIPVR 323
            L  KL  +F+++DLG L++FLG+EV      M L+QTKY  DLLHRT+  + KP   P  
Sbjct: 892  LIXKLDSIFTLRDLGQLSYFLGIEVSYHEGSMNLSQTKYVSDLLHRTEMFDTKPAKTPGV 951

Query: 324  SGKKLSLYDGDPLADPTEYRSVVGALQYLTLTRPDISFAVNQFCQFMHQPTTTHWTVVKR 503
             GK LS +DGDP+ + T+YRSVVGALQYLT+TRPDI+FAVN+ CQFM QPT+ HW  +KR
Sbjct: 952  VGKNLSKFDGDPMDEVTQYRSVVGALQYLTITRPDIAFAVNKACQFMQQPTSAHWLSIKR 1011

Query: 504  IPRYLKHTPDYGLLYKPG-SLSLQAYSDADYAEDPD 608
            I RYLK T   GLL  P  +L+++ +SDA++   PD
Sbjct: 1012 ILRYLKGTMQDGLLLSPSTNLTIEXFSDANWGAQPD 1047



 Score = 75.9 bits (185), Expect(2) = 3e-57
 Identities = 37/70 (52%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
 Frame = +1

Query: 616  STGGFCIFLGSNLISWSAKKQRTVSRSSTEAEYRQLAYTAAEISWIRLLLQDLQVFLTP- 792
            S+ G+ ++LG NL+SWS+ KQ+ VSRSS E+EYR LA   AEI W++ LLQ+L V +   
Sbjct: 1051 SSSGYLVYLGGNLVSWSSTKQKVVSRSSAESEYRGLALATAEIIWMQALLQELCVPIPAI 1110

Query: 793  PHIWCDNISS 822
            P +W DNIS+
Sbjct: 1111 PLLWYDNISA 1120


>gb|ABA95366.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 552

 Score =  161 bits (407), Expect(2) = 3e-57
 Identities = 83/154 (53%), Positives = 110/154 (71%), Gaps = 3/154 (1%)
 Frame = +3

Query: 144 LYKKLGRLFSMKDLGPLNFFLGLEVVSKSSGMTLTQTKYTLDLLHRTKFQEVKPISIPVR 323
           L K L + F++KDL  L++FLG+EV   S G+ LTQ KY  D+L R   Q+ KP+S P+ 
Sbjct: 253 LDKDLTKEFALKDLEELHYFLGIEVNKTSDGIMLTQEKYASDILRRVGMQDCKPVSTPLL 312

Query: 324 SGKKLSLYDGDPLA--DPTEYRSVVGALQYLTLTRPDISFAVNQFCQFMHQPTTTHWTVV 497
           + +KL +++G  L   D T+YRS+VGAL YLTLTRPDISF+VN+ CQF+H PTT HWTVV
Sbjct: 313 ASEKLLVHEGTLLGQKDTTQYRSIVGALPYLTLTRPDISFSVNKVCQFLHSPTTVHWTVV 372

Query: 498 KRIPRYLKHTPDYGL-LYKPGSLSLQAYSDADYA 596
           KRI RYLK+T + GL + K  SL +  + DAD+A
Sbjct: 373 KRILRYLKYTVNCGLRISKSSSLLVSGFCDADWA 406



 Score = 88.2 bits (217), Expect(2) = 3e-57
 Identities = 43/71 (60%), Positives = 55/71 (77%), Gaps = 2/71 (2%)
 Frame = +1

Query: 616 STGGFCIFLGSNLISWSAKKQRTVSRSSTEAEYRQLAYTAAEISWIRLLLQDLQVFLTP- 792
           STGGF +FLGSNL+SWSA+KQ TVSRSSTEAEY+ LA T AEI W++ LL ++ +  TP 
Sbjct: 414 STGGFAVFLGSNLVSWSARKQTTVSRSSTEAEYKALADTKAEIMWLQTLLYEIGI-ETPK 472

Query: 793 -PHIWCDNISS 822
              +WCDN+ +
Sbjct: 473 AAKVWCDNVGA 483


>emb|CAN69851.1| hypothetical protein VITISV_009554 [Vitis vinifera]
          Length = 1282

 Score =  174 bits (441), Expect(2) = 4e-57
 Identities = 86/156 (55%), Positives = 110/156 (70%), Gaps = 1/156 (0%)
 Frame = +3

Query: 144  LYKKLGRLFSMKDLGPLNFFLGLEVVSKSSGMTLTQTKYTLDLLHRTKFQEVKPISIPVR 323
            L  KL  +F+++DL  L++FLG+EV      M L+QTKY  DLLHRT+  + KP   P  
Sbjct: 966  LIAKLDSIFALRDLXQLSYFLGIEVSYHEGSMNLSQTKYVSDLLHRTEMFDTKPAKTPGA 1025

Query: 324  SGKKLSLYDGDPLADPTEYRSVVGALQYLTLTRPDISFAVNQFCQFMHQPTTTHWTVVKR 503
             GK LS +DGDP+ + T+YRSVVGALQYLT+TRPDI+FAVN+ CQFM QPT+ HW  VKR
Sbjct: 1026 VGKNLSKFDGDPMDEVTQYRSVVGALQYLTITRPDIAFAVNKTCQFMQQPTSAHWLSVKR 1085

Query: 504  IPRYLKHTPDYGLLYKPG-SLSLQAYSDADYAEDPD 608
            I RYLK T   GLL  P  +L+++ +SDAD+   PD
Sbjct: 1086 ILRYLKGTMQDGLLLSPSTNLTIEGFSDADWGAQPD 1121



 Score = 74.7 bits (182), Expect(2) = 4e-57
 Identities = 36/70 (51%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
 Frame = +1

Query: 616  STGGFCIFLGSNLISWSAKKQRTVSRSSTEAEYRQLAYTAAEISWIRLLLQDLQVFLTP- 792
            S+ G+ ++LG NL+SWS+ KQ+ VSRSS ++EYR LA   AEI W++ LLQ+L V +   
Sbjct: 1125 SSSGYLVYLGGNLVSWSSTKQKVVSRSSAKSEYRALALATAEIIWMQALLQELCVPIPAI 1184

Query: 793  PHIWCDNISS 822
            P +W DNIS+
Sbjct: 1185 PLLWYDNISA 1194


>emb|CAN63683.1| hypothetical protein VITISV_030301 [Vitis vinifera]
          Length = 1272

 Score =  159 bits (402), Expect(2) = 4e-57
 Identities = 82/152 (53%), Positives = 103/152 (67%), Gaps = 1/152 (0%)
 Frame = +3

Query: 156  LGRLFSMKDLGPLNFFLGLEVVSKSSGMTLTQTKYTLDLLHRTKFQEVKPISIPVRSGKK 335
            L   F+++DLGPL++FLG++     S + L Q KY  DLL RT+ +  KP   P R G+ 
Sbjct: 942  LSTKFALRDLGPLSYFLGIQAQQLGSVLHLNQHKYIADLLKRTQMETSKPAPTPGRLGRT 1001

Query: 336  LSLYDGDPLADPTEYRSVVGALQYLTLTRPDISFAVNQFCQFMHQPTTTHWTVVKRIPRY 515
            LS  DG  L+DP EYR  VGALQY+TLTRPDI+FAVN+ CQFM +P+  HW  VKRI RY
Sbjct: 1002 LSQSDGVSLSDPLEYRRTVGALQYVTLTRPDIAFAVNKACQFMAKPSDVHWMAVKRILRY 1061

Query: 516  LKHTPDYGLLYKP-GSLSLQAYSDADYAEDPD 608
            LK T   GL ++P  S+ LQ YSDAD+A  PD
Sbjct: 1062 LKGTIHLGLHFQPAASMELQGYSDADWASCPD 1093



 Score = 89.7 bits (221), Expect(2) = 4e-57
 Identities = 41/69 (59%), Positives = 53/69 (76%)
 Frame = +1

Query: 616  STGGFCIFLGSNLISWSAKKQRTVSRSSTEAEYRQLAYTAAEISWIRLLLQDLQVFLTPP 795
            ST G+C+FLGSNLISWS+ KQR VS+SS E+EYR L    AE+ WI+ LLQ+L +  +PP
Sbjct: 1097 STSGYCVFLGSNLISWSSSKQRLVSKSSAESEYRGLVSLTAELVWIQSLLQELCLPTSPP 1156

Query: 796  HIWCDNISS 822
             +WCDN S+
Sbjct: 1157 ILWCDNQSA 1165


>emb|CAN67073.1| hypothetical protein VITISV_011746 [Vitis vinifera]
          Length = 879

 Score =  163 bits (412), Expect(2) = 4e-57
 Identities = 84/162 (51%), Positives = 105/162 (64%), Gaps = 2/162 (1%)
 Frame = +3

Query: 129  NIFFGLYKKLGRLFSMKDLGPLNFFLGLEVVSKSSGMTLTQTKYTLDLLHRTKFQEVKPI 308
            ++   L +KL   F MKDLGPL +FLG++    SSG+ L Q+KY  DLL RTK    KP 
Sbjct: 611  SLIXSLIQKLQTEFKMKDLGPLGYFLGIQASRDSSGLHLXQSKYIGDLLQRTKMAGAKPA 670

Query: 309  SIPVRSGKKLSLYDGDPL--ADPTEYRSVVGALQYLTLTRPDISFAVNQFCQFMHQPTTT 482
            S P  +G KLS + G+PL  +  TEYR   GALQY TL RPDI+F+VNQ CQ MH P + 
Sbjct: 671  SSPCTTGLKLSTHVGEPLTASQITEYRQTXGALQYCTLNRPDIAFSVNQLCQHMHCPNSV 730

Query: 483  HWTVVKRIPRYLKHTPDYGLLYKPGSLSLQAYSDADYAEDPD 608
            HWT  KR+  YLK T D GL Y  G  +LQA+ D+D+A +PD
Sbjct: 731  HWTTAKRVLCYLKGTIDLGLWYTKGEQTLQAFCDSDWAGNPD 772



 Score = 85.9 bits (211), Expect(2) = 4e-57
 Identities = 42/67 (62%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
 Frame = +1

Query: 616 STGGFCIFLGSNLISWSAKKQRTVSRSSTEAEYRQLAYTAAEISWIRLLLQDLQVFL-TP 792
           ST G+ +F GS LISW+AKKQ  V+RSSTEAEYR L  T AE+ WIR+LL++L + L T 
Sbjct: 776 STTGYGVFFGSCLISWTAKKQSVVARSSTEAEYRALTITTAELYWIRMLLKELHISLPTA 835

Query: 793 PHIWCDN 813
           P IWCDN
Sbjct: 836 PTIWCDN 842


>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea mays]
          Length = 1313

 Score =  164 bits (414), Expect(2) = 6e-57
 Identities = 82/158 (51%), Positives = 110/158 (69%), Gaps = 3/158 (1%)
 Frame = +3

Query: 144  LYKKLGRLFSMKDLGPLNFFLGLEVVSKSSGMTLTQTKYTLDLLHRTKFQEVKPISIPVR 323
            L   L + F++KDLG LN+FLG+EV     G+ LTQ KY  DLL +    + KPIS P+ 
Sbjct: 1015 LLSDLNKEFALKDLGDLNYFLGIEVNKVRDGIILTQDKYASDLLKKVGMSDCKPISTPLS 1074

Query: 324  SGKKLSLYDGDPLA--DPTEYRSVVGALQYLTLTRPDISFAVNQFCQFMHQPTTTHWTVV 497
            + +KLS+++G PL   D T+YRS+VGALQYLTLTRPDI+F+VN+ CQF+H PTT HW  V
Sbjct: 1075 TSEKLSIHEGSPLGEKDITQYRSIVGALQYLTLTRPDIAFSVNKVCQFLHAPTTLHWAAV 1134

Query: 498  KRIPRYLKHTPDYGL-LYKPGSLSLQAYSDADYAEDPD 608
            KRI RY+K   + GL +++  S  + A+SDAD+A   D
Sbjct: 1135 KRILRYIKQCTNLGLHIHRSDSTLVSAFSDADWAGSVD 1172



 Score = 84.7 bits (208), Expect(2) = 6e-57
 Identities = 38/70 (54%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
 Frame = +1

Query: 616  STGGFCIFLGSNLISWSAKKQRTVSRSSTEAEYRQLAYTAAEISWIRLLLQDLQV-FLTP 792
            STGGF +FLGSNL+SWSA+KQ TVSRSSTE+EY+ LA   AE+ W+++LL ++ +     
Sbjct: 1176 STGGFAVFLGSNLVSWSARKQPTVSRSSTESEYKALANATAELIWVQILLTEISIKSPRA 1235

Query: 793  PHIWCDNISS 822
              +WCDN+ +
Sbjct: 1236 AKLWCDNLGA 1245