BLASTX nr result
ID: Paeonia23_contig00004657
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia23_contig00004657
(2084 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN69118.1| hypothetical protein VITISV_031845 [Vitis vinifera] 632 e-178
gb|EXB88225.1| tRNA pseudouridine synthase A [Morus notabilis] 598 e-168
gb|ADN34131.1| tRNA pseudouridine synthase family protein [Cucum... 598 e-168
ref|XP_002510619.1| pseudouridylate synthase, putative [Ricinus ... 592 e-166
ref|XP_004157082.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudou... 588 e-165
ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mi... 588 e-165
ref|XP_007154901.1| hypothetical protein PHAVU_003G157400g [Phas... 587 e-165
ref|XP_007154900.1| hypothetical protein PHAVU_003G157400g [Phas... 587 e-165
ref|XP_002300673.2| hypothetical protein POPTR_0002s01580g [Popu... 564 e-158
ref|NP_001047686.1| Os02g0668400 [Oryza sativa Japonica Group] g... 530 e-148
gb|EEC73751.1| hypothetical protein OsI_08404 [Oryza sativa Indi... 529 e-147
ref|XP_006307113.1| hypothetical protein CARUB_v10008701mg [Caps... 516 e-143
gb|EYU17545.1| hypothetical protein MIMGU_mgv1a003821mg [Mimulus... 516 e-143
ref|XP_004953401.1| PREDICTED: tRNA pseudouridine synthase A, mi... 512 e-142
gb|EAZ24127.1| hypothetical protein OsJ_07867 [Oryza sativa Japo... 471 e-130
ref|XP_003610360.1| tRNA pseudouridine synthase [Medicago trunca... 362 5e-97
ref|XP_003610354.1| tRNA pseudouridine synthase [Medicago trunca... 360 1e-96
ref|XP_003610356.1| tRNA pseudouridine synthase [Medicago trunca... 360 1e-96
ref|XP_006575306.1| PREDICTED: tRNA pseudouridine synthase A, mi... 359 2e-96
ref|XP_003519139.1| PREDICTED: tRNA pseudouridine synthase A, mi... 359 2e-96
>emb|CAN69118.1| hypothetical protein VITISV_031845 [Vitis vinifera]
Length = 559
Score = 632 bits (1631), Expect = e-178
Identities = 334/536 (62%), Positives = 392/536 (73%), Gaps = 3/536 (0%)
Frame = -3
Query: 1908 FFAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSA 1729
FFAYCGVGYQGMQKNPGAKTIE DLEEALF SGAVPEQ+RG+ KR+DWARSARTDKGVSA
Sbjct: 32 FFAYCGVGYQGMQKNPGAKTIEGDLEEALFFSGAVPEQDRGHPKRFDWARSARTDKGVSA 91
Query: 1728 VGQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFAL 1549
VGQVVSGRFY+DPPGLV+RLNSNL QIRIFGFKRVT +F+AKKFCDRRRYVYLIP FAL
Sbjct: 92 VGQVVSGRFYIDPPGLVERLNSNLPPQIRIFGFKRVTASFNAKKFCDRRRYVYLIPVFAL 151
Query: 1548 DPCSHPDRETVLASVGSENELVKCLECSDRGRKVVGVMGKRSFEFRALNSETVVDXXXXX 1369
DP SHPDRE+VLASVGSENELVKCLECS+RGRKVVG+MGKRSFE + +V D
Sbjct: 152 DPSSHPDRESVLASVGSENELVKCLECSERGRKVVGIMGKRSFESKV----SVDDREDVE 207
Query: 1368 XXXXXXXXXXXXXXXXXSLDNDH-DDNSKSVQNQDTILSSDPMKVSSVTIEDEEANAEEK 1192
++ N + K+ N + I +++ + S TI++E A +
Sbjct: 208 GESKNIVQLGIPSNDEAAIVNSEVQEEIKATSNNNNIDANNSI---SETIKEEAAKLSSE 264
Query: 1191 LAKGSSSSEKIVMLXXXXXXXXXXSHSEVKDVMASLNNDD--CLMSENETNKVLSNNGKS 1018
+ + E + S ++ + + +S N D + + + +N S
Sbjct: 265 VDAEIINGENSISEPVKVGAAILKSEAKEESMASSDNRHDGNSISQPIKEGRCFQDNETS 324
Query: 1017 GMAVETMVCVQNEGTVLESGSMENDKVTVKDEEEKPARGSGFCYGEKEKVRFNRILNSYV 838
++ QNE V S S ++DK E K +GSGFCYG+KE+ RFNRIL YV
Sbjct: 325 ESTPDSRASAQNEPGV--SHSEQSDK-----GENKLEKGSGFCYGDKERERFNRILGHYV 377
Query: 837 GTHNFHNFTTRIKAEDPSAKRFIISFDAKTTVNVEGIEFVKCEVVGQSFMLHQIRKMIGL 658
GTHNFHNFTTRIKAEDPSA+RFI+SFD T V VEGIEFVKCEVVGQSFMLHQIRKMIGL
Sbjct: 378 GTHNFHNFTTRIKAEDPSAQRFIVSFDGNTIVTVEGIEFVKCEVVGQSFMLHQIRKMIGL 437
Query: 657 AVAIMRNCAPESLIETALQKNVNITVPTAPEVGLYLDECFFTSYNNKWKDTHEEVSMKAY 478
AVAIMRN APESL+ETAL K+VNI VPTAPEVGLYLDECFF+SYN KW+D+HEEVSMKAY
Sbjct: 438 AVAIMRNVAPESLLETALLKDVNINVPTAPEVGLYLDECFFSSYNKKWRDSHEEVSMKAY 497
Query: 477 EDEAEEFKMKHIYPHIGSTENKEGSVALWLHSLNHRNYPDLRVVKDGITTDGKSAE 310
+EAEEFKMKH+Y HI +TE+KEG VALWLHSLNHRNYPDL + +G +DGK+ E
Sbjct: 498 AEEAEEFKMKHVYSHIAATEHKEGVVALWLHSLNHRNYPDLCIGDNGAASDGKNGE 553
>gb|EXB88225.1| tRNA pseudouridine synthase A [Morus notabilis]
Length = 621
Score = 598 bits (1543), Expect = e-168
Identities = 331/568 (58%), Positives = 393/568 (69%), Gaps = 35/568 (6%)
Frame = -3
Query: 1908 FFAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSA 1729
FFAYCGVGYQGMQKNPGAKTIE DLEEAL+LSGAVPEQ+R KRYDWARSARTDKGVSA
Sbjct: 59 FFAYCGVGYQGMQKNPGAKTIEGDLEEALYLSGAVPEQDRYCPKRYDWARSARTDKGVSA 118
Query: 1728 VGQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFAL 1549
VGQVVSGRFY+DPPGLV+RLNS L+ QIRIFG+KRVT +F+AKKFCDRRRYVYLIP FAL
Sbjct: 119 VGQVVSGRFYIDPPGLVERLNSKLSPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFAL 178
Query: 1548 DPCSHPDRETVLASVGSENELVKCLECSDRGRKVVGVMGKRSFEFRALNSETVVDXXXXX 1369
DP SHP+RE+VLAS+GSE+ELVKC+ECS+RGRKV G+MGKRS+E + ++ +
Sbjct: 179 DPSSHPNRESVLASLGSESELVKCVECSERGRKVPGLMGKRSYELTGASFDSGISLNICD 238
Query: 1368 XXXXXXXXXXXXXXXXXSLDNDHDDNSKSVQNQ---DTILSSD--PMKVSSVTIEDEEAN 1204
+ +N S N D+ +SS+ KV SV D E N
Sbjct: 239 AKVDSVVSDENVVASINDIGEVKVENGDSETNHASFDSGISSNICDAKVDSVENGDSETN 298
Query: 1203 -AEEKLAKGSSSSEKIVMLXXXXXXXXXXSHSEVKDVMASLNNDDCLMSEN---ETNKVL 1036
A L S+ + V ++ +AS+N + EN ETN+
Sbjct: 299 RASFDLGISSNICDAKVDSVVTE-----------ENRVASVNGVGEVKVENGDSETNRAS 347
Query: 1035 SNNGKSGMAVETMV-----------CVQNEGTV-LESGSMENDKV---TVKDE------- 922
N+G S +T V V +G V +E+G E ++V T+ +E
Sbjct: 348 FNSGISSNICDTKVVSVVRDENGVASVNGDGEVKVENGDSETNQVEGRTLDNEVSTGEEG 407
Query: 921 ----EEKPARGSGFCYGEKEKVRFNRILNSYVGTHNFHNFTTRIKAEDPSAKRFIISFDA 754
E+KP + S F YGEKE+ RFNRIL Y GTHNFHNFTTR KAEDP+A+RFIISF+A
Sbjct: 408 NVNGEQKPEKRSDFSYGEKERERFNRILKHYEGTHNFHNFTTRTKAEDPAAQRFIISFNA 467
Query: 753 KTTVNVEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIETALQKNVNITVPT 574
T + VEG+EFVKCEVVGQSFMLHQIRKMIGLAVAIMRNC PESL+E ALQK+VNI +PT
Sbjct: 468 NTVIPVEGMEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCVPESLMENALQKDVNINIPT 527
Query: 573 APEVGLYLDECFFTSYNNKWKDTHEEVSMKAYEDEAEEFKMKHIYPHIGSTENKEGSVAL 394
APEVGLYLDEC F+SYN KWKD+HEE+SMKAY +EAEEFKMKHIY HIG TE KEG VAL
Sbjct: 528 APEVGLYLDECLFSSYNKKWKDSHEEMSMKAYAEEAEEFKMKHIYSHIGLTEQKEGVVAL 587
Query: 393 WLHSLNHRNYPDLRVVKDGITTDGKSAE 310
WLHSLN+RNYPD + V + TT+ S +
Sbjct: 588 WLHSLNYRNYPDFQAVDNKNTTNNNSTD 615
>gb|ADN34131.1| tRNA pseudouridine synthase family protein [Cucumis melo subsp. melo]
Length = 519
Score = 598 bits (1543), Expect = e-168
Identities = 324/526 (61%), Positives = 368/526 (69%), Gaps = 3/526 (0%)
Frame = -3
Query: 1908 FFAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSA 1729
FFAYCGVGYQGMQKNPGAKTIEADLEEAL+L+GAVPEQ+RG SKRYDWARSARTDKGVSA
Sbjct: 60 FFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRGLSKRYDWARSARTDKGVSA 119
Query: 1728 VGQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFAL 1549
VGQVVSGRFY+DPPG VDRLNSNL+ QIRIFG+KRVT +F+AKKFCDRRRYVYLIP FAL
Sbjct: 120 VGQVVSGRFYIDPPGFVDRLNSNLSPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFAL 179
Query: 1548 DPCSHPDRETVLASVGSENELVKCLECSDRGRKVVGVMGKRSFEFRALNSETVVDXXXXX 1369
DP H DRE+V AS+GS+NELVKCLECS+RGRKV G+MGKR+FE + +E+ +
Sbjct: 180 DPNCHRDRESVKASLGSDNELVKCLECSERGRKVEGLMGKRNFEVKTAITESDISSNIVN 239
Query: 1368 XXXXXXXXXXXXXXXXXSLDNDHDDNSKSVQNQDTILSSDPMKVSSVTIED---EEANAE 1198
+ D + +D+ +SD K +SV +E+ E A
Sbjct: 240 AI-------------------EVSDVQANGVLEDSATTSDSNKQTSVLVENTATELTVAS 280
Query: 1197 EKLAKGSSSSEKIVMLXXXXXXXXXXSHSEVKDVMASLNNDDCLMSENETNKVLSNNGKS 1018
E +AK SS M+ L ND ++ E S NGK
Sbjct: 281 EGIAKSESSE------------------------MSGLGNDSEIVVSKE-----SVNGK- 310
Query: 1017 GMAVETMVCVQNEGTVLESGSMENDKVTVKDEEEKPARGSGFCYGEKEKVRFNRILNSYV 838
EKP+ F YGE+EK RFNRIL YV
Sbjct: 311 ---------------------------------EKPS--GSFKYGEEEKARFNRILKHYV 335
Query: 837 GTHNFHNFTTRIKAEDPSAKRFIISFDAKTTVNVEGIEFVKCEVVGQSFMLHQIRKMIGL 658
GTHNFHNFTTR KAEDP+A+RFI+SFDA TTV VEGIEFVKCEVVGQSFMLHQIRKM+GL
Sbjct: 336 GTHNFHNFTTRTKAEDPAARRFIVSFDASTTVVVEGIEFVKCEVVGQSFMLHQIRKMMGL 395
Query: 657 AVAIMRNCAPESLIETALQKNVNITVPTAPEVGLYLDECFFTSYNNKWKDTHEEVSMKAY 478
AVAIMRNCAPESLIE ALQK+VNI VPTAPEVGLYLDEC FTSYN KWKDTHEEVSMKAY
Sbjct: 396 AVAIMRNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKDTHEEVSMKAY 455
Query: 477 EDEAEEFKMKHIYPHIGSTENKEGSVALWLHSLNHRNYPDLRVVKD 340
E+ AE+FKMK IY HI STE+K+G+VALWLHSLNHRNYPDLRV+ +
Sbjct: 456 EEVAEDFKMKQIYSHIASTEHKDGAVALWLHSLNHRNYPDLRVIDE 501
>ref|XP_002510619.1| pseudouridylate synthase, putative [Ricinus communis]
gi|223551320|gb|EEF52806.1| pseudouridylate synthase,
putative [Ricinus communis]
Length = 584
Score = 592 bits (1525), Expect = e-166
Identities = 325/541 (60%), Positives = 379/541 (70%), Gaps = 5/541 (0%)
Frame = -3
Query: 1908 FFAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSA 1729
FFAYCGVGYQGMQKNPGAKTIE DLEEALF SGAVPEQ+RG KRYDWARSARTDKGVSA
Sbjct: 59 FFAYCGVGYQGMQKNPGAKTIEGDLEEALFHSGAVPEQDRGCPKRYDWARSARTDKGVSA 118
Query: 1728 VGQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFAL 1549
VGQV+SGRFYVDPPGLVDRLNS L SQIRIFG+KRVT +F+AKKFCDRRRYVYLIP FAL
Sbjct: 119 VGQVISGRFYVDPPGLVDRLNSILPSQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFAL 178
Query: 1548 DPCSHPDRETVLASVGSENELVKCLECSDRGRKVVGVMGKRSFEFRALNSETVVDXXXXX 1369
DP SH DRE+VLAS+GS +ELVKCLECS+RGRKV+G +GKRSFE
Sbjct: 179 DPSSHRDRESVLASLGSGDELVKCLECSERGRKVIGAVGKRSFE---------------- 222
Query: 1368 XXXXXXXXXXXXXXXXXSLDNDHDDNSKSVQNQDTILSSDPMKVSSVTIEDEEANAEEKL 1189
SKS Q IL + +++ I+++ + + +
Sbjct: 223 --------------------------SKSEAFQTDILLNGGCAIANCEIKEDISMSMDNA 256
Query: 1188 AKGSSSSEKIVMLXXXXXXXXXXSHSEVKDVMASLNNDDCLMSENETNKVLSNNGKSGMA 1009
SE + H+E + +++ D ++S +E V S++ + +
Sbjct: 257 HGVRMHSEFVEQTNVS--------HNEDSETESAMPRTD-ILSNSEDGNVKSDSKQEEVM 307
Query: 1008 VETMVCVQNEGTVLESGSMEND-KVTVKDE----EEKPARGSGFCYGEKEKVRFNRILNS 844
V +G ES +ME D K +V +E EE +GS FCYGE+EK +FNRIL
Sbjct: 308 VSEDAA---DGGNKESETMEKDSKASVGEERVNGEEHVMKGSEFCYGEEEKEKFNRILKY 364
Query: 843 YVGTHNFHNFTTRIKAEDPSAKRFIISFDAKTTVNVEGIEFVKCEVVGQSFMLHQIRKMI 664
YVG+HNFHNFTTR KAEDPSA+R+IISFDA+TTV VEGIEFVKCEV+GQSFMLHQIRKMI
Sbjct: 365 YVGSHNFHNFTTRTKAEDPSAQRYIISFDARTTVTVEGIEFVKCEVIGQSFMLHQIRKMI 424
Query: 663 GLAVAIMRNCAPESLIETALQKNVNITVPTAPEVGLYLDECFFTSYNNKWKDTHEEVSMK 484
GLAVAIMRNCAPESLI TALQK+V I VPTAPEVGLYLDECFFTSYN KWKD HEE+ MK
Sbjct: 425 GLAVAIMRNCAPESLISTALQKDVKINVPTAPEVGLYLDECFFTSYNQKWKD-HEELCMK 483
Query: 483 AYEDEAEEFKMKHIYPHIGSTENKEGSVALWLHSLNHRNYPDLRVVKDGITTDGKSAEGV 304
YE+ AE+FKMK+IY HI STE KEG V LWLHSLN+RNYPDLR + KS E V
Sbjct: 484 DYEEVAEDFKMKYIYSHIASTEQKEGVVGLWLHSLNYRNYPDLRFCYTLDANNEKSTEVV 543
Query: 303 D 301
+
Sbjct: 544 N 544
>ref|XP_004157082.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudouridine synthase A,
mitochondrial-like [Cucumis sativus]
Length = 519
Score = 588 bits (1516), Expect = e-165
Identities = 320/523 (61%), Positives = 366/523 (69%)
Frame = -3
Query: 1908 FFAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSA 1729
FFAYCGVGYQGMQKNPGAKTIEADLEEAL+L+GAVPEQ+RG SKRYDWARSARTDKGVSA
Sbjct: 60 FFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRGLSKRYDWARSARTDKGVSA 119
Query: 1728 VGQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFAL 1549
VGQVVSGRFY+DPPG VDRLNSNL+ QIRIFG+KRVT +F+AKKFCDRRRYVYLIP FAL
Sbjct: 120 VGQVVSGRFYIDPPGFVDRLNSNLSPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFAL 179
Query: 1548 DPCSHPDRETVLASVGSENELVKCLECSDRGRKVVGVMGKRSFEFRALNSETVVDXXXXX 1369
DP H DRE+V AS+GS+NELVKCLECS+RGRKV G++GKR+FE + +E+ +
Sbjct: 180 DPNCHRDRESVKASLGSDNELVKCLECSERGRKVEGLIGKRNFEVKTAITESDISSNTVN 239
Query: 1368 XXXXXXXXXXXXXXXXXSLDNDHDDNSKSVQNQDTILSSDPMKVSSVTIEDEEANAEEKL 1189
+ D + +D+ +SD K +SV +E N +L
Sbjct: 240 AI-------------------EVSDVQANGVLEDSATTSDSNKQTSVLVE----NTATEL 276
Query: 1188 AKGSSSSEKIVMLXXXXXXXXXXSHSEVKDVMASLNNDDCLMSENETNKVLSNNGKSGMA 1009
GS + K SE + M+ L +D ++ E S NGK
Sbjct: 277 NVGSEGTAK----------------SESSE-MSGLGSDSEIVVSKE-----SVNGKE--- 311
Query: 1008 VETMVCVQNEGTVLESGSMENDKVTVKDEEEKPARGSGFCYGEKEKVRFNRILNSYVGTH 829
SGS F YGE+EK RFNRIL YVGTH
Sbjct: 312 -------------KSSGS--------------------FKYGEEEKARFNRILKHYVGTH 338
Query: 828 NFHNFTTRIKAEDPSAKRFIISFDAKTTVNVEGIEFVKCEVVGQSFMLHQIRKMIGLAVA 649
NFHNFTTR KAEDP+A+RFI+SFDA V VEGIEFVKCEVVGQSFMLHQIRKM+GLAVA
Sbjct: 339 NFHNFTTRTKAEDPAARRFIVSFDASAIVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVA 398
Query: 648 IMRNCAPESLIETALQKNVNITVPTAPEVGLYLDECFFTSYNNKWKDTHEEVSMKAYEDE 469
IMRNCAPESLIE ALQK+VNI VPTAPEVGLYLDEC FTSYN KWKDTHEEVSMKAYE+
Sbjct: 399 IMRNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKDTHEEVSMKAYEEA 458
Query: 468 AEEFKMKHIYPHIGSTENKEGSVALWLHSLNHRNYPDLRVVKD 340
AE+FKMK IY HI STE+K+G+VALWLHSLNHRNYPDLRV+ +
Sbjct: 459 AEDFKMKQIYSHIASTEHKDGAVALWLHSLNHRNYPDLRVIDE 501
>ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Cucumis
sativus]
Length = 519
Score = 588 bits (1516), Expect = e-165
Identities = 320/523 (61%), Positives = 366/523 (69%)
Frame = -3
Query: 1908 FFAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSA 1729
FFAYCGVGYQGMQKNPGAKTIEADLEEAL+L+GAVPEQ+RG SKRYDWARSARTDKGVSA
Sbjct: 60 FFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRGLSKRYDWARSARTDKGVSA 119
Query: 1728 VGQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFAL 1549
VGQVVSGRFY+DPPG VDRLNSNL+ QIRIFG+KRVT +F+AKKFCDRRRYVYLIP FAL
Sbjct: 120 VGQVVSGRFYIDPPGFVDRLNSNLSPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFAL 179
Query: 1548 DPCSHPDRETVLASVGSENELVKCLECSDRGRKVVGVMGKRSFEFRALNSETVVDXXXXX 1369
DP H DRE+V AS+GS+NELVKCLECS+RGRKV G++GKR+FE + +E+ +
Sbjct: 180 DPNCHRDRESVKASLGSDNELVKCLECSERGRKVEGLIGKRNFEVKTAITESDISSNTVN 239
Query: 1368 XXXXXXXXXXXXXXXXXSLDNDHDDNSKSVQNQDTILSSDPMKVSSVTIEDEEANAEEKL 1189
+ D + +D+ +SD K +SV +E N +L
Sbjct: 240 AI-------------------EVSDVQANGVLEDSATTSDSNKQTSVLVE----NTATEL 276
Query: 1188 AKGSSSSEKIVMLXXXXXXXXXXSHSEVKDVMASLNNDDCLMSENETNKVLSNNGKSGMA 1009
GS + K SE + M+ L +D ++ E S NGK
Sbjct: 277 NVGSEGTAK----------------SESSE-MSGLGSDSEIVVSKE-----SVNGKE--- 311
Query: 1008 VETMVCVQNEGTVLESGSMENDKVTVKDEEEKPARGSGFCYGEKEKVRFNRILNSYVGTH 829
SGS F YGE+EK RFNRIL YVGTH
Sbjct: 312 -------------KSSGS--------------------FKYGEEEKARFNRILKHYVGTH 338
Query: 828 NFHNFTTRIKAEDPSAKRFIISFDAKTTVNVEGIEFVKCEVVGQSFMLHQIRKMIGLAVA 649
NFHNFTTR KAEDP+A+RFI+SFDA V VEGIEFVKCEVVGQSFMLHQIRKM+GLAVA
Sbjct: 339 NFHNFTTRTKAEDPAARRFIVSFDASAIVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVA 398
Query: 648 IMRNCAPESLIETALQKNVNITVPTAPEVGLYLDECFFTSYNNKWKDTHEEVSMKAYEDE 469
IMRNCAPESLIE ALQK+VNI VPTAPEVGLYLDEC FTSYN KWKDTHEEVSMKAYE+
Sbjct: 399 IMRNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKDTHEEVSMKAYEEA 458
Query: 468 AEEFKMKHIYPHIGSTENKEGSVALWLHSLNHRNYPDLRVVKD 340
AE+FKMK IY HI STE+K+G+VALWLHSLNHRNYPDLRV+ +
Sbjct: 459 AEDFKMKQIYSHIASTEHKDGAVALWLHSLNHRNYPDLRVIDE 501
>ref|XP_007154901.1| hypothetical protein PHAVU_003G157400g [Phaseolus vulgaris]
gi|561028255|gb|ESW26895.1| hypothetical protein
PHAVU_003G157400g [Phaseolus vulgaris]
Length = 556
Score = 587 bits (1513), Expect = e-165
Identities = 313/535 (58%), Positives = 364/535 (68%), Gaps = 2/535 (0%)
Frame = -3
Query: 1908 FFAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSA 1729
FFAYCGVGYQGMQKNPGAKTIE DLEEAL++SGAVPE +RG KRYDWARSARTDKGVSA
Sbjct: 28 FFAYCGVGYQGMQKNPGAKTIEGDLEEALYVSGAVPEHDRGIPKRYDWARSARTDKGVSA 87
Query: 1728 VGQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFAL 1549
VGQVVSGRFY+DPPGLVDRLNSNL SQIRIFG+KRVT +F+AKKFCDRRRYVYLIP FAL
Sbjct: 88 VGQVVSGRFYIDPPGLVDRLNSNLHSQIRIFGYKRVTGSFNAKKFCDRRRYVYLIPVFAL 147
Query: 1548 DPCSHPDRETVLASVGSENELVKCLECSDRGRKVVGVMG--KRSFEFRALNSETVVDXXX 1375
DPC H DRETV+AS+GS NELVKCLECS+RGRKVVG++G K + E A++ E +
Sbjct: 148 DPCCHRDRETVMASLGSTNELVKCLECSERGRKVVGLVGNRKHNLELEAMDVEAGISSNT 207
Query: 1374 XXXXXXXXXXXXXXXXXXXSLDNDHDDNSKSVQNQDTILSSDPMKVSSVTIEDEEANAEE 1195
D++H + + N+ +L + N +
Sbjct: 208 DVVLDSVVTGDVEASLSKG--DDNHLNGESGIDNKGKVLV-------------DGTNLKT 252
Query: 1194 KLAKGSSSSEKIVMLXXXXXXXXXXSHSEVKDVMASLNNDDCLMSENETNKVLSNNGKSG 1015
+ KG ++++ L S+NN D + E + S +G
Sbjct: 253 GIEKGIPVQDEVMPLNG-----------------ESVNNSDIIEEEKMNGEDKSTSG--- 292
Query: 1014 MAVETMVCVQNEGTVLESGSMENDKVTVKDEEEKPARGSGFCYGEKEKVRFNRILNSYVG 835
+M C YGEKE+ RFN+ILN +VG
Sbjct: 293 ----SMFC----------------------------------YGEKERERFNKILNCFVG 314
Query: 834 THNFHNFTTRIKAEDPSAKRFIISFDAKTTVNVEGIEFVKCEVVGQSFMLHQIRKMIGLA 655
THNFHNFTTR KAEDP+A+R+IISF+A T VEGIEFVKCEVVGQSFMLHQIRKM+GLA
Sbjct: 315 THNFHNFTTRTKAEDPAARRYIISFNANTAFAVEGIEFVKCEVVGQSFMLHQIRKMMGLA 374
Query: 654 VAIMRNCAPESLIETALQKNVNITVPTAPEVGLYLDECFFTSYNNKWKDTHEEVSMKAYE 475
VAIMRNCAPESLI ALQ++VNI VPTAPEVGLYLDECFF+SYN KWKD+HEE+SMKAYE
Sbjct: 375 VAIMRNCAPESLINKALQQDVNINVPTAPEVGLYLDECFFSSYNQKWKDSHEELSMKAYE 434
Query: 474 DEAEEFKMKHIYPHIGSTENKEGSVALWLHSLNHRNYPDLRVVKDGITTDGKSAE 310
EAEEFKMK+IY HI TE KEG+VALWLHSLNHRNYPDLRVV + TD KSA+
Sbjct: 435 KEAEEFKMKYIYSHISFTEQKEGTVALWLHSLNHRNYPDLRVVNEEAITDNKSAD 489
>ref|XP_007154900.1| hypothetical protein PHAVU_003G157400g [Phaseolus vulgaris]
gi|593783723|ref|XP_007154902.1| hypothetical protein
PHAVU_003G157400g [Phaseolus vulgaris]
gi|561028254|gb|ESW26894.1| hypothetical protein
PHAVU_003G157400g [Phaseolus vulgaris]
gi|561028256|gb|ESW26896.1| hypothetical protein
PHAVU_003G157400g [Phaseolus vulgaris]
Length = 586
Score = 587 bits (1513), Expect = e-165
Identities = 313/535 (58%), Positives = 364/535 (68%), Gaps = 2/535 (0%)
Frame = -3
Query: 1908 FFAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSA 1729
FFAYCGVGYQGMQKNPGAKTIE DLEEAL++SGAVPE +RG KRYDWARSARTDKGVSA
Sbjct: 58 FFAYCGVGYQGMQKNPGAKTIEGDLEEALYVSGAVPEHDRGIPKRYDWARSARTDKGVSA 117
Query: 1728 VGQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFAL 1549
VGQVVSGRFY+DPPGLVDRLNSNL SQIRIFG+KRVT +F+AKKFCDRRRYVYLIP FAL
Sbjct: 118 VGQVVSGRFYIDPPGLVDRLNSNLHSQIRIFGYKRVTGSFNAKKFCDRRRYVYLIPVFAL 177
Query: 1548 DPCSHPDRETVLASVGSENELVKCLECSDRGRKVVGVMG--KRSFEFRALNSETVVDXXX 1375
DPC H DRETV+AS+GS NELVKCLECS+RGRKVVG++G K + E A++ E +
Sbjct: 178 DPCCHRDRETVMASLGSTNELVKCLECSERGRKVVGLVGNRKHNLELEAMDVEAGISSNT 237
Query: 1374 XXXXXXXXXXXXXXXXXXXSLDNDHDDNSKSVQNQDTILSSDPMKVSSVTIEDEEANAEE 1195
D++H + + N+ +L + N +
Sbjct: 238 DVVLDSVVTGDVEASLSKG--DDNHLNGESGIDNKGKVLV-------------DGTNLKT 282
Query: 1194 KLAKGSSSSEKIVMLXXXXXXXXXXSHSEVKDVMASLNNDDCLMSENETNKVLSNNGKSG 1015
+ KG ++++ L S+NN D + E + S +G
Sbjct: 283 GIEKGIPVQDEVMPLNG-----------------ESVNNSDIIEEEKMNGEDKSTSG--- 322
Query: 1014 MAVETMVCVQNEGTVLESGSMENDKVTVKDEEEKPARGSGFCYGEKEKVRFNRILNSYVG 835
+M C YGEKE+ RFN+ILN +VG
Sbjct: 323 ----SMFC----------------------------------YGEKERERFNKILNCFVG 344
Query: 834 THNFHNFTTRIKAEDPSAKRFIISFDAKTTVNVEGIEFVKCEVVGQSFMLHQIRKMIGLA 655
THNFHNFTTR KAEDP+A+R+IISF+A T VEGIEFVKCEVVGQSFMLHQIRKM+GLA
Sbjct: 345 THNFHNFTTRTKAEDPAARRYIISFNANTAFAVEGIEFVKCEVVGQSFMLHQIRKMMGLA 404
Query: 654 VAIMRNCAPESLIETALQKNVNITVPTAPEVGLYLDECFFTSYNNKWKDTHEEVSMKAYE 475
VAIMRNCAPESLI ALQ++VNI VPTAPEVGLYLDECFF+SYN KWKD+HEE+SMKAYE
Sbjct: 405 VAIMRNCAPESLINKALQQDVNINVPTAPEVGLYLDECFFSSYNQKWKDSHEELSMKAYE 464
Query: 474 DEAEEFKMKHIYPHIGSTENKEGSVALWLHSLNHRNYPDLRVVKDGITTDGKSAE 310
EAEEFKMK+IY HI TE KEG+VALWLHSLNHRNYPDLRVV + TD KSA+
Sbjct: 465 KEAEEFKMKYIYSHISFTEQKEGTVALWLHSLNHRNYPDLRVVNEEAITDNKSAD 519
>ref|XP_002300673.2| hypothetical protein POPTR_0002s01580g [Populus trichocarpa]
gi|550344062|gb|EEE79946.2| hypothetical protein
POPTR_0002s01580g [Populus trichocarpa]
Length = 516
Score = 564 bits (1454), Expect = e-158
Identities = 307/534 (57%), Positives = 366/534 (68%), Gaps = 1/534 (0%)
Frame = -3
Query: 1908 FFAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSA 1729
FFAYCGVGYQGMQKNPGAKTIE DLEEALF +GAVPEQ+RG KRYDWARSARTDKGVSA
Sbjct: 59 FFAYCGVGYQGMQKNPGAKTIEGDLEEALFHAGAVPEQDRGIPKRYDWARSARTDKGVSA 118
Query: 1728 VGQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFAL 1549
VGQVVSGRFY+DPPGLV+RL+SNL+ Q RIFG+KRVT +F+AKKFCDRRR
Sbjct: 119 VGQVVSGRFYIDPPGLVERLHSNLSPQFRIFGYKRVTGSFNAKKFCDRRR---------- 168
Query: 1548 DPCSHPDRETVLASVGSENELVKCLECSDRGRKVVGVMGKRSFEFRALNSETVVDXXXXX 1369
E+VLAS+ S +EL+KCLECS+RGRKV G +GKRSFE +S
Sbjct: 169 --------ESVLASLRSGSELIKCLECSERGRKVAGAVGKRSFELADNSS---------- 210
Query: 1368 XXXXXXXXXXXXXXXXXSLDNDHDDNSKS-VQNQDTILSSDPMKVSSVTIEDEEANAEEK 1192
ND D + KS ++ + +L + ++ I + E E K
Sbjct: 211 --------------------NDKDASVKSEIKEEVGVLLDNGLE----DIRNSETVNETK 246
Query: 1191 LAKGSSSSEKIVMLXXXXXXXXXXSHSEVKDVMASLNNDDCLMSENETNKVLSNNGKSGM 1012
+ + S K VM + + S N++D ++ ++++ +
Sbjct: 247 IFQNDGSGSKSVM----------------PESVISSNSEDANVNPESKDEIIVS------ 284
Query: 1011 AVETMVCVQNEGTVLESGSMENDKVTVKDEEEKPARGSGFCYGEKEKVRFNRILNSYVGT 832
+E+G E K +E+ +GS FCYGEKEK RFNRIL YVG+
Sbjct: 285 --------------VENGDDEKTK-----SKEEMVKGSSFCYGEKEKERFNRILGYYVGS 325
Query: 831 HNFHNFTTRIKAEDPSAKRFIISFDAKTTVNVEGIEFVKCEVVGQSFMLHQIRKMIGLAV 652
HNFHNFTTR KAEDPSA+R+I+SF+AKTTVNVEGIEFVKCEVVGQSFMLHQIRKMIG+AV
Sbjct: 326 HNFHNFTTRTKAEDPSARRYIVSFEAKTTVNVEGIEFVKCEVVGQSFMLHQIRKMIGVAV 385
Query: 651 AIMRNCAPESLIETALQKNVNITVPTAPEVGLYLDECFFTSYNNKWKDTHEEVSMKAYED 472
AIMRNCAPESLI+TALQK+VNI VPTAPEVGLYLDECFFTSYN KWKD+HEE+SMK YE+
Sbjct: 386 AIMRNCAPESLIQTALQKDVNINVPTAPEVGLYLDECFFTSYNQKWKDSHEEISMKDYEE 445
Query: 471 EAEEFKMKHIYPHIGSTENKEGSVALWLHSLNHRNYPDLRVVKDGITTDGKSAE 310
EAE+FKMKHIY HI +TE+KEGSVALWLHSLNHRNYPDLRV T D ++E
Sbjct: 446 EAEDFKMKHIYSHIATTEHKEGSVALWLHSLNHRNYPDLRVSN---TVDNNNSE 496
>ref|NP_001047686.1| Os02g0668400 [Oryza sativa Japonica Group]
gi|50251324|dbj|BAD28300.1| putative pseudouridine
synthase 1 [Oryza sativa Japonica Group]
gi|50252138|dbj|BAD28134.1| putative pseudouridine
synthase 1 [Oryza sativa Japonica Group]
gi|113537217|dbj|BAF09600.1| Os02g0668400 [Oryza sativa
Japonica Group]
Length = 581
Score = 530 bits (1366), Expect = e-148
Identities = 288/538 (53%), Positives = 352/538 (65%), Gaps = 5/538 (0%)
Frame = -3
Query: 1899 YCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSAVGQ 1720
YCG GYQGMQKNPGA+TIE DLEEAL+ +GAVPE +R +RYDWAR+ARTDKGVSA Q
Sbjct: 57 YCGAGYQGMQKNPGARTIEGDLEEALYRAGAVPEADRAAPRRYDWARAARTDKGVSAAAQ 116
Query: 1719 VVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFALDPC 1540
VVSGRFYVDPP DRLN+ LA QIR FG+ RVT +F+AKKFCDRRRYVYL+P FALDP
Sbjct: 117 VVSGRFYVDPPVFTDRLNAQLAPQIRAFGYVRVTNSFNAKKFCDRRRYVYLLPVFALDPS 176
Query: 1539 SHPDRETVLASVGSENELVKCLECSDRGRKVVGVMGKRS-FEFRALNSETVVDXXXXXXX 1363
+HPDRE V+ASVGS +EL KCLECS+RGRKV GVMG+ AL E V+
Sbjct: 177 AHPDREAVMASVGSGSELTKCLECSERGRKVPGVMGREGKVPDPALQEEKSVEASREEAA 236
Query: 1362 XXXXXXXXXXXXXXXSLDNDHDDNSKSVQNQDTILSSDPMKVSSVTIEDEEANAEEKLAK 1183
+ ++ D N D + + I D E N + +
Sbjct: 237 ----------------VGSNEDANCDPASTGDRSVD--------LPIPDNETNTQITEMR 272
Query: 1182 GSSSSEKIVMLXXXXXXXXXXSHSEVKDVMASLNNDDCLMSENETNKVLSNNGKSGMAVE 1003
+ + + V L S + V LN+D S++ K G ++E
Sbjct: 273 SNGAEKCDVQLSGGTLCSEAVPASNSETVCPILNSDSNTNSDSVDVDPSFVAEKKG-SIE 331
Query: 1002 TMVCVQNEGTVLESGSMENDKVTVKDE----EEKPARGSGFCYGEKEKVRFNRILNSYVG 835
T+V + ++ + + K V E EE P R S F Y + K RFNRIL YVG
Sbjct: 332 TVVTEDGKKQAMDVVTEDEKKQDVDYEGSSLEEMPLR-SAFSYTHEVKERFNRILKKYVG 390
Query: 834 THNFHNFTTRIKAEDPSAKRFIISFDAKTTVNVEGIEFVKCEVVGQSFMLHQIRKMIGLA 655
THNFHNFTTR KAEDP+AKRFIISF A VN++GI+F++CEVVGQSFMLHQIRKMIGLA
Sbjct: 391 THNFHNFTTRTKAEDPAAKRFIISFAADRVVNLDGIDFIRCEVVGQSFMLHQIRKMIGLA 450
Query: 654 VAIMRNCAPESLIETALQKNVNITVPTAPEVGLYLDECFFTSYNNKWKDTHEEVSMKAYE 475
VA+MRNCAPES+ + A +K+VN+ VPTAPEVGLYLDEC FTSYN KWKD+HE VSM+ Y
Sbjct: 451 VAVMRNCAPESIYDVAFRKDVNLNVPTAPEVGLYLDECMFTSYNKKWKDSHEAVSMEPYS 510
Query: 474 DEAEEFKMKHIYPHIGSTENKEGSVALWLHSLNHRNYPDLRVVKDGITTDGKSAEGVD 301
+EAEEFK+K+I+PHI + E+KEG+VALWLHSLN RNYPD R + D T+ A V+
Sbjct: 511 EEAEEFKLKYIFPHIAAMEHKEGAVALWLHSLNSRNYPDFRYM-DNAGTEASIAAAVE 567
>gb|EEC73751.1| hypothetical protein OsI_08404 [Oryza sativa Indica Group]
Length = 581
Score = 529 bits (1363), Expect = e-147
Identities = 288/538 (53%), Positives = 352/538 (65%), Gaps = 5/538 (0%)
Frame = -3
Query: 1899 YCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSAVGQ 1720
YCG GYQGMQKNPGA+TIE DLEEAL+ +GAVPE +R +RYDWAR+ARTDKGVSA Q
Sbjct: 57 YCGAGYQGMQKNPGARTIEGDLEEALYRAGAVPEADRAAPRRYDWARAARTDKGVSAAAQ 116
Query: 1719 VVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFALDPC 1540
VVSGRFYVDPP DRLN+ LA QIR FG+ RVT +F+AKKFCDRRRYVYL+P FALDP
Sbjct: 117 VVSGRFYVDPPVFTDRLNAQLAPQIRAFGYVRVTNSFNAKKFCDRRRYVYLLPVFALDPS 176
Query: 1539 SHPDRETVLASVGSENELVKCLECSDRGRKVVGVMGKRS-FEFRALNSETVVDXXXXXXX 1363
+HPDRE V+ASVGS +EL KCLECS+RGRKV GVMG+ AL E V+
Sbjct: 177 AHPDREAVMASVGSGSELTKCLECSERGRKVPGVMGREGKVPDPALQEEKSVEASREEAA 236
Query: 1362 XXXXXXXXXXXXXXXSLDNDHDDNSKSVQNQDTILSSDPMKVSSVTIEDEEANAEEKLAK 1183
+ ++ D N D + + I D E N + +
Sbjct: 237 ----------------VGSNEDANCDPASTGDRSVD--------LPIPDNETNTQITEMR 272
Query: 1182 GSSSSEKIVMLXXXXXXXXXXSHSEVKDVMASLNNDDCLMSENETNKVLSNNGKSGMAVE 1003
+ + + V L S + V LN+D S++ K G ++E
Sbjct: 273 SNGAEKCDVQLSGGTLCSEAVPASISETVCPILNSDSNTNSDSVDVDPSFVAEKKG-SIE 331
Query: 1002 TMVCVQNEGTVLESGSMENDKVTVKDE----EEKPARGSGFCYGEKEKVRFNRILNSYVG 835
T+V + ++ + + K V E EE P R S F Y + K RFNRIL YVG
Sbjct: 332 TVVTEDGKKQAMDVVTEDEKKQDVDYEGSSLEEMPLR-SAFSYTHEVKERFNRILKKYVG 390
Query: 834 THNFHNFTTRIKAEDPSAKRFIISFDAKTTVNVEGIEFVKCEVVGQSFMLHQIRKMIGLA 655
THNFHNFTTR KAEDP+AKRFIISF A VN++GI+F++CEVVGQSFMLHQIRKMIGLA
Sbjct: 391 THNFHNFTTRTKAEDPAAKRFIISFAADRVVNLDGIDFIRCEVVGQSFMLHQIRKMIGLA 450
Query: 654 VAIMRNCAPESLIETALQKNVNITVPTAPEVGLYLDECFFTSYNNKWKDTHEEVSMKAYE 475
VA+MRNCAPES+ + A +K+VN+ VPTAPEVGLYLDEC FTSYN KWKD+HE VSM+ Y
Sbjct: 451 VAVMRNCAPESIYDVAFRKDVNLNVPTAPEVGLYLDECMFTSYNKKWKDSHEAVSMEPYS 510
Query: 474 DEAEEFKMKHIYPHIGSTENKEGSVALWLHSLNHRNYPDLRVVKDGITTDGKSAEGVD 301
+EAEEFK+K+I+PHI + E+KEG+VALWLHSLN RNYPD R + D T+ A V+
Sbjct: 511 EEAEEFKLKYIFPHIAAMEHKEGAVALWLHSLNSRNYPDFRYM-DNAGTEASIAAAVE 567
>ref|XP_006307113.1| hypothetical protein CARUB_v10008701mg [Capsella rubella]
gi|482575824|gb|EOA40011.1| hypothetical protein
CARUB_v10008701mg [Capsella rubella]
Length = 574
Score = 516 bits (1330), Expect = e-143
Identities = 280/520 (53%), Positives = 342/520 (65%), Gaps = 2/520 (0%)
Frame = -3
Query: 1905 FAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSAV 1726
FA+CGVGYQGMQKNPGAKTIE +LEEALF +GAVPE +R + Y+WARSARTDKGVSAV
Sbjct: 64 FAFCGVGYQGMQKNPGAKTIEGELEEALFHAGAVPEADRNKPRSYEWARSARTDKGVSAV 123
Query: 1725 GQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFALD 1546
GQVVSGRFYVDPPG V+RLNSNL QIR+FG+KRV P+FS+KKFCDRRRYVYLIP FALD
Sbjct: 124 GQVVSGRFYVDPPGFVERLNSNLPDQIRVFGYKRVAPSFSSKKFCDRRRYVYLIPVFALD 183
Query: 1545 PCSHPDRETVLASVGSENELVKCLECSDRGRKV-VGVMGKRSFEFRALNSETVVDXXXXX 1369
PC H + E V +G E VKC+ECS+ G K+ VGVMGK
Sbjct: 184 PCVHSEAEMVRTDLGYE--YVKCVECSENGYKIPVGVMGK-------------------- 221
Query: 1368 XXXXXXXXXXXXXXXXXSLDNDHDDNSKSVQNQDTILSSDPMKVSSVTIEDEEANA-EEK 1192
D D ++KS++ Q I S+ S+ I+D ++ A
Sbjct: 222 ---------------------DTDCDAKSLEIQSDISHSN---CDSLGIDDVKSEALSSS 257
Query: 1191 LAKGSSSSEKIVMLXXXXXXXXXXSHSEVKDVMASLNNDDCLMSENETNKVLSNNGKSGM 1012
++ G + V+ + DV A + T + ++ KS
Sbjct: 258 VSNGDDNLNSEVL--------------DGADVAARV----------VTEETPDSSSKSED 293
Query: 1011 AVETMVCVQNEGTVLESGSMENDKVTVKDEEEKPARGSGFCYGEKEKVRFNRILNSYVGT 832
E + E L G M+N +E + FCYGEKEK RFNRIL+ YVG+
Sbjct: 294 MEELNLDSSKESDTLAKGEMKN-------KERRDMTEGNFCYGEKEKERFNRILSYYVGS 346
Query: 831 HNFHNFTTRIKAEDPSAKRFIISFDAKTTVNVEGIEFVKCEVVGQSFMLHQIRKMIGLAV 652
HNFHNFTTR KA DP+A R+I+SF+A T +N++G +FVKCEVVGQSFMLHQIRKMIGLAV
Sbjct: 347 HNFHNFTTRTKAADPAANRYILSFNANTVINLDGKDFVKCEVVGQSFMLHQIRKMIGLAV 406
Query: 651 AIMRNCAPESLIETALQKNVNITVPTAPEVGLYLDECFFTSYNNKWKDTHEEVSMKAYED 472
A+MRN APE+LIETA +K+V I VP APEVGLYLDECFFTSYN ++K +HEEVSM+ Y++
Sbjct: 407 AVMRNYAPETLIETAFKKDVRINVPMAPEVGLYLDECFFTSYNKRFKGSHEEVSMEEYKE 466
Query: 471 EAEEFKMKHIYPHIGSTENKEGSVALWLHSLNHRNYPDLR 352
AEEFK KH+Y HIGS E K+G+VA+WLHSLNHRNYPDLR
Sbjct: 467 VAEEFKWKHVYSHIGSAEEKDGAVAIWLHSLNHRNYPDLR 506
>gb|EYU17545.1| hypothetical protein MIMGU_mgv1a003821mg [Mimulus guttatus]
Length = 562
Score = 516 bits (1329), Expect = e-143
Identities = 288/559 (51%), Positives = 359/559 (64%), Gaps = 23/559 (4%)
Frame = -3
Query: 1908 FFAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSA 1729
FFAYCGVGYQGMQKNPGAKTIE DLEEAL+LSGA+PE+ERG KRY+WARSARTDKGVSA
Sbjct: 51 FFAYCGVGYQGMQKNPGAKTIEGDLEEALYLSGAIPEEERGLHKRYEWARSARTDKGVSA 110
Query: 1728 VGQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFAL 1549
VGQVVSGRFYVDPPG ++RL+S+L+ QIRIFG+KRVTP+F+AKKFCDRRRY
Sbjct: 111 VGQVVSGRFYVDPPGFIERLHSHLSPQIRIFGYKRVTPSFNAKKFCDRRRY--------- 161
Query: 1548 DPCSHPDRETVLASVGSENELVKCLECSDRGRKVVGVMGK-RSFEFRALNSETVVDXXXX 1372
CLECS+RGRKV GVMGK R+FE +A +
Sbjct: 162 -----------------------CLECSERGRKVFGVMGKQRNFESKAPGEGENENVEVG 198
Query: 1371 XXXXXXXXXXXXXXXXXXSLDNDHDDNSKSVQNQDTILSSDPMKVSSVTIEDEEANAEEK 1192
+ D ++V+ ILS++ S T E AN+ E
Sbjct: 199 SGISSNNGTGSF----------ESKDVGENVEVGSGILSNNG---SPPTDEKVVANSLEN 245
Query: 1191 LAKGSSSSEKIVMLXXXXXXXXXXSHSEVKDVMASLNNDDCLMSEN----ETNKVLSNNG 1024
GS+ SE + + + + +V ++ D ++S+N + +K + ++
Sbjct: 246 NEIGSNGSENVSI---------GAAQDDKMEVDKAVLVDSAILSDNVSVLDESKTVVDSS 296
Query: 1023 KSGMAVETMVCVQNEGTVLESGSMENDKVTVKDEEEKPARG------------------S 898
+ G+ E T LE+GS E +K+ +E R S
Sbjct: 297 EKGI----------ENTDLENGSSETEKLLETGDESIEKRNVDKLESENANGHTEAEKKS 346
Query: 897 GFCYGEKEKVRFNRILNSYVGTHNFHNFTTRIKAEDPSAKRFIISFDAKTTVNVEGIEFV 718
FCYGE+EK RFNRIL Y GTHNFHNFTTR KAEDP+A+R+I+SF+A T VNV+GI+FV
Sbjct: 347 EFCYGEEEKARFNRILKFYEGTHNFHNFTTRTKAEDPAARRYILSFNANTVVNVDGIDFV 406
Query: 717 KCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIETALQKNVNITVPTAPEVGLYLDECF 538
KCEVVGQSFMLHQIRKMIGLAVA+MRN PES +ETA ++V VP APEVGLYLDECF
Sbjct: 407 KCEVVGQSFMLHQIRKMIGLAVAMMRNITPESKMETAFLQSVRFNVPMAPEVGLYLDECF 466
Query: 537 FTSYNNKWKDTHEEVSMKAYEDEAEEFKMKHIYPHIGSTENKEGSVALWLHSLNHRNYPD 358
F+SYNNKWKD+HEEVSMKAY +E+EEFKMK+IYPH+ S+E+K+G+VALWLHSLN+RN+PD
Sbjct: 467 FSSYNNKWKDSHEEVSMKAYAEESEEFKMKYIYPHVASSEHKDGAVALWLHSLNYRNFPD 526
Query: 357 LRVVKDGITTDGKSAEGVD 301
LR +DG E V+
Sbjct: 527 LRAADSEPVSDGNGTEIVN 545
>ref|XP_004953401.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Setaria
italica]
Length = 538
Score = 512 bits (1318), Expect = e-142
Identities = 280/519 (53%), Positives = 338/519 (65%)
Frame = -3
Query: 1899 YCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSAVGQ 1720
YCG GYQGMQKNPGA+TIE DLEEAL+ +GAVPE +R +RYDWAR+ARTDKGVSA Q
Sbjct: 55 YCGAGYQGMQKNPGARTIEGDLEEALYQAGAVPEADRAAPRRYDWARAARTDKGVSAAAQ 114
Query: 1719 VVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFALDPC 1540
VVSGRFYVDPPG +DRLN+ LA QI +G+ RVT +FSAKKFCDRRRY+YL+P FALDP
Sbjct: 115 VVSGRFYVDPPGFIDRLNAQLAPQIHAYGYVRVTNSFSAKKFCDRRRYLYLLPVFALDPS 174
Query: 1539 SHPDRETVLASVGSENELVKCLECSDRGRKVVGVMGKRSFEFRALNSETVVDXXXXXXXX 1360
+HPDRE V+AS+GS +EL KCLECS+RGRKV GVMG+ L S V
Sbjct: 175 AHPDREAVMASMGSGSELTKCLECSERGRKVPGVMGREG----KLPSPGV---------- 220
Query: 1359 XXXXXXXXXXXXXXSLDNDHDDNSKSVQNQDTILSSDPMKVSSVTIEDEEANAEEKLAKG 1180
N HD++ DP +V+ E + NAE G
Sbjct: 221 ------NGTDAPVEGTVNTHDESGSI-----GAAKGDP----TVSEETQAGNAE----LG 261
Query: 1179 SSSSEKIVMLXXXXXXXXXXSHSEVKDVMASLNNDDCLMSENETNKVLSNNGKSGMAVET 1000
S+ + +V S D AS+ N++ N A E
Sbjct: 262 SNGASDVV-------------PSGSADADASIGNEE--------------NKLEATATEE 294
Query: 999 MVCVQNEGTVLESGSMENDKVTVKDEEEKPARGSGFCYGEKEKVRFNRILNSYVGTHNFH 820
V +G E+ + E T D F Y ++ K RFNRIL YVGTHNFH
Sbjct: 295 KV----QGMDFENSNGEEKPPTKSD----------FSYNDEMKERFNRILKYYVGTHNFH 340
Query: 819 NFTTRIKAEDPSAKRFIISFDAKTTVNVEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMR 640
NFTTR KAEDP+AKRFIISF A V+++GI+FV+CEVVGQSFMLHQIRKMIGLAVA+MR
Sbjct: 341 NFTTRTKAEDPAAKRFIISFAADRVVSLDGIDFVRCEVVGQSFMLHQIRKMIGLAVAVMR 400
Query: 639 NCAPESLIETALQKNVNITVPTAPEVGLYLDECFFTSYNNKWKDTHEEVSMKAYEDEAEE 460
NCAPES+ + A +K+V + VPTAPEVGLYLDEC FTSYN KWKD+HE VSM+ Y +EAEE
Sbjct: 401 NCAPESIYDVAFRKDVKLNVPTAPEVGLYLDECMFTSYNKKWKDSHEAVSMEPYCEEAEE 460
Query: 459 FKMKHIYPHIGSTENKEGSVALWLHSLNHRNYPDLRVVK 343
FK+K+I+PHI + E+KEG+VALWLHSLNHRNYPD R ++
Sbjct: 461 FKVKYIFPHIAAMEHKEGAVALWLHSLNHRNYPDFRYME 499
>gb|EAZ24127.1| hypothetical protein OsJ_07867 [Oryza sativa Japonica Group]
Length = 518
Score = 471 bits (1211), Expect = e-130
Identities = 270/536 (50%), Positives = 332/536 (61%), Gaps = 11/536 (2%)
Frame = -3
Query: 1875 MQKNPGAKTIEADLEEALFLSGAVPEQERG------NSKRYDWARSARTDKGVSAVGQVV 1714
MQKNPGA+TIE D GA+P + G AR+ARTDKGVSA QVV
Sbjct: 1 MQKNPGARTIEGDPG-----GGALPGRRPGPRPNAPGPAATTGARAARTDKGVSAAAQVV 55
Query: 1713 SGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFALDPCSH 1534
SGRFYVDPP DRLN+ LA QIR FG+ RVT +F+AKKFCDRRRYVYL+P FALDP +H
Sbjct: 56 SGRFYVDPPVFTDRLNAQLAPQIRAFGYVRVTNSFNAKKFCDRRRYVYLLPVFALDPSAH 115
Query: 1533 PDRETVLASVGSENELVKCLECSDRGRKVVGVMGKRS-FEFRALNSETVVDXXXXXXXXX 1357
PDRE V+ASVGS +EL KCLECS+RGRKV GVMG+ AL E V+
Sbjct: 116 PDREAVMASVGSGSELTKCLECSERGRKVPGVMGREGKVPDPALQEEKSVEASREEAA-- 173
Query: 1356 XXXXXXXXXXXXXSLDNDHDDNSKSVQNQDTILSSDPMKVSSVTIEDEEANAEEKLAKGS 1177
+ ++ D N D + + I D E N + + +
Sbjct: 174 --------------VGSNEDANCDPASTGDRSVD--------LPIPDNETNTQITEMRSN 211
Query: 1176 SSSEKIVMLXXXXXXXXXXSHSEVKDVMASLNNDDCLMSENETNKVLSNNGKSGMAVETM 997
+ + V L S + V LN+D S++ K G ++ET+
Sbjct: 212 GAEKCDVQLSGGTLCSEAVPASNSETVCPILNSDSNTNSDSVDVDPSFVAEKKG-SIETV 270
Query: 996 VCVQNEGTVLESGSMENDKVTVKDE----EEKPARGSGFCYGEKEKVRFNRILNSYVGTH 829
V + ++ + + K V E EE P R S F Y + K RFNRIL YVGTH
Sbjct: 271 VTEDGKKQAMDVVTEDEKKQDVDYEGSSLEEMPLR-SAFSYTHEVKERFNRILKKYVGTH 329
Query: 828 NFHNFTTRIKAEDPSAKRFIISFDAKTTVNVEGIEFVKCEVVGQSFMLHQIRKMIGLAVA 649
NFHNFTTR KAEDP+AKRFIISF A VN++GI+F++CEVVGQSFMLHQIRKMIGLAVA
Sbjct: 330 NFHNFTTRTKAEDPAAKRFIISFAADRVVNLDGIDFIRCEVVGQSFMLHQIRKMIGLAVA 389
Query: 648 IMRNCAPESLIETALQKNVNITVPTAPEVGLYLDECFFTSYNNKWKDTHEEVSMKAYEDE 469
+MRNCAPES+ + A +K+VN+ VPTAPEVGLYLDEC FTSYN KWKD+HE VSM+ Y +E
Sbjct: 390 VMRNCAPESIYDVAFRKDVNLNVPTAPEVGLYLDECMFTSYNKKWKDSHEAVSMEPYSEE 449
Query: 468 AEEFKMKHIYPHIGSTENKEGSVALWLHSLNHRNYPDLRVVKDGITTDGKSAEGVD 301
AEEFK+K+I+PHI + E+KEG+VALWLHSLN RNYPD R + D T+ A V+
Sbjct: 450 AEEFKLKYIFPHIAAMEHKEGAVALWLHSLNSRNYPDFRYM-DNAGTEASIAAAVE 504
>ref|XP_003610360.1| tRNA pseudouridine synthase [Medicago truncatula]
gi|355511415|gb|AES92557.1| tRNA pseudouridine synthase
[Medicago truncatula] gi|388510220|gb|AFK43176.1| unknown
[Medicago truncatula]
Length = 530
Score = 362 bits (928), Expect = 5e-97
Identities = 186/271 (68%), Positives = 214/271 (78%), Gaps = 9/271 (3%)
Frame = -3
Query: 1104 KDVMASLNNDDCLMSENETNKVLSNNGKSGMAVE-----TMVCVQNEGTVLESGSMENDK 940
KDV SL+ D +N NK N+ + ++VE T+V Q+E + GS N
Sbjct: 247 KDVEVSLSKGD----DNHLNKESINDNEGKVSVEEVNSKTVVSDQDEVAPINGGSENNLG 302
Query: 939 VTVKDE---EEKPARGSGFCYGEKEKVRFNRILNSYVGTHNFHNFTTRIKAEDPSAKRFI 769
+ +++ E+ A GSGFCYGEKE+ RFN IL YVGTHNFHNFTTRIK EDPSAKRFI
Sbjct: 303 ILEEEKVNREDTAANGSGFCYGEKERERFNNILKCYVGTHNFHNFTTRIKPEDPSAKRFI 362
Query: 768 ISFDAKTTVNVEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIETALQKNVN 589
ISFDA TTV VEG+EFVKCE+VGQSFMLHQIRKM+GLAVAIMRNCAPESLIE ALQK+V+
Sbjct: 363 ISFDASTTVVVEGMEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVS 422
Query: 588 ITVPTAPEVGLYLDECFFTSYNNKWKDTHEEVSMKAYEDEAEEFKMKHIYPHIGSTENKE 409
ITVPTAPEVGLYLDECFFTSYN KWKDTHEEVSMKAYE EAE+FKM++IYPHI STE KE
Sbjct: 423 ITVPTAPEVGLYLDECFFTSYNQKWKDTHEEVSMKAYEKEAEDFKMQYIYPHIASTEYKE 482
Query: 408 GSVALWLHSLNHRNYPDLRVVK-DGITTDGK 319
G+V LWLHSLNHRNYPDLR++ +G+T D K
Sbjct: 483 GTVGLWLHSLNHRNYPDLRILDGEGVTNDKK 513
Score = 298 bits (764), Expect = 5e-78
Identities = 162/262 (61%), Positives = 186/262 (70%), Gaps = 18/262 (6%)
Frame = -3
Query: 1908 FFAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSA 1729
FFAYCGVGYQGMQKNPGAKTIE +LEEAL++SGAVPEQ+RG SKRYDWARSARTDKGVSA
Sbjct: 59 FFAYCGVGYQGMQKNPGAKTIEGELEEALYVSGAVPEQDRGLSKRYDWARSARTDKGVSA 118
Query: 1728 VGQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFAL 1549
VGQVVSGRFY+DPPG VDRLNSNL SQIRIFGFKRVT +FSAKKFCDRRRYVYLIP FAL
Sbjct: 119 VGQVVSGRFYIDPPGFVDRLNSNLPSQIRIFGFKRVTASFSAKKFCDRRRYVYLIPVFAL 178
Query: 1548 DPCSHPDRETVLASVGSENELVKCLECSDRGRKVVGVMG--KRSFEFRAL-------NSE 1396
DPC H DRETVLAS+GSENELVKCL CS+RGRKV GV+G KR+ E A+ N
Sbjct: 179 DPCCHRDRETVLASLGSENELVKCLPCSERGRKVEGVVGNSKRNLELEAVDVENGSSNKN 238
Query: 1395 TVVDXXXXXXXXXXXXXXXXXXXXXXSLDNDHDDNSKSVQNQDTILSSDPMKVSSVT--- 1225
VVD S++++ S N T++ SD +V+ +
Sbjct: 239 DVVDSGVTKDVEVSLSKGDDNHLNKESINDNEGKVSVEEVNSKTVV-SDQDEVAPINGGS 297
Query: 1224 ------IEDEEANAEEKLAKGS 1177
+E+E+ N E+ A GS
Sbjct: 298 ENNLGILEEEKVNREDTAANGS 319
>ref|XP_003610354.1| tRNA pseudouridine synthase [Medicago truncatula]
gi|355511409|gb|AES92551.1| tRNA pseudouridine synthase
[Medicago truncatula]
Length = 361
Score = 360 bits (925), Expect = 1e-96
Identities = 186/271 (68%), Positives = 213/271 (78%), Gaps = 9/271 (3%)
Frame = -3
Query: 1104 KDVMASLNNDDCLMSENETNKVLSNNGKSGMAVE-----TMVCVQNEGTVLESGSMENDK 940
KDV SL+ D +N NK N + ++VE T+V Q+E + GS N
Sbjct: 78 KDVEVSLSKGD----DNHINKESINYNEGKVSVEEVNSKTVVSDQDEVAPINGGSENNLG 133
Query: 939 VTVKDE---EEKPARGSGFCYGEKEKVRFNRILNSYVGTHNFHNFTTRIKAEDPSAKRFI 769
+ +++ E+ A GSGFCYGEKE+ RFN IL YVGTHNFHNFTTRIK EDPSAKRFI
Sbjct: 134 ILEEEKVNREDTAANGSGFCYGEKERERFNNILKCYVGTHNFHNFTTRIKPEDPSAKRFI 193
Query: 768 ISFDAKTTVNVEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIETALQKNVN 589
ISFDA TTV VEG+EFVKCE+VGQSFMLHQIRKM+GLAVAIMRNCAPESLIE ALQK+V+
Sbjct: 194 ISFDASTTVVVEGMEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVS 253
Query: 588 ITVPTAPEVGLYLDECFFTSYNNKWKDTHEEVSMKAYEDEAEEFKMKHIYPHIGSTENKE 409
ITVPTAPEVGLYLDECFFTSYN KWKDTHEEVSMKAYE EAE+FKM++IYPHI STE KE
Sbjct: 254 ITVPTAPEVGLYLDECFFTSYNQKWKDTHEEVSMKAYEKEAEDFKMQYIYPHIASTEYKE 313
Query: 408 GSVALWLHSLNHRNYPDLRVVK-DGITTDGK 319
G+V LWLHSLNHRNYPDLR++ +G+T D K
Sbjct: 314 GTVGLWLHSLNHRNYPDLRILDGEGVTNDKK 344
Score = 62.0 bits (149), Expect = 1e-06
Identities = 48/134 (35%), Positives = 65/134 (48%), Gaps = 18/134 (13%)
Frame = -3
Query: 1524 ETVLASVGSENELVKCLECSDRGRKVVGVMG--KRSFEFRAL-------NSETVVDXXXX 1372
ETVLAS+GSENELVKCL CS+RGRKV GV+G KR+ E A+ N VVD
Sbjct: 18 ETVLASLGSENELVKCLPCSERGRKVEGVVGNSKRNLELEAVDVENGSSNKNDVVDSGVT 77
Query: 1371 XXXXXXXXXXXXXXXXXXSLDNDHDDNSKSVQNQDTILSSDPMKVSSVT---------IE 1219
S++ + S N T++ SD +V+ + +E
Sbjct: 78 KDVEVSLSKGDDNHINKESINYNEGKVSVEEVNSKTVV-SDQDEVAPINGGSENNLGILE 136
Query: 1218 DEEANAEEKLAKGS 1177
+E+ N E+ A GS
Sbjct: 137 EEKVNREDTAANGS 150
>ref|XP_003610356.1| tRNA pseudouridine synthase [Medicago truncatula]
gi|355511411|gb|AES92553.1| tRNA pseudouridine synthase
[Medicago truncatula]
Length = 530
Score = 360 bits (925), Expect = 1e-96
Identities = 185/271 (68%), Positives = 214/271 (78%), Gaps = 9/271 (3%)
Frame = -3
Query: 1104 KDVMASLNNDDCLMSENETNKVLSNNGKSGMAVE-----TMVCVQNEGTVLESGSMENDK 940
KDV SL+ D +N NK N+ + ++VE T+V ++E + GS N
Sbjct: 247 KDVEVSLSKGD----DNHLNKESINDNEGKVSVEEVNSKTVVSDEDEVAPINGGSENNLG 302
Query: 939 VTVKDE---EEKPARGSGFCYGEKEKVRFNRILNSYVGTHNFHNFTTRIKAEDPSAKRFI 769
+ +++ E+ A GSGFCYGEKE+ RFN IL YVGTHNFHNFTTRIK EDPSAKRFI
Sbjct: 303 ILEEEKVNREDTAANGSGFCYGEKERERFNNILKCYVGTHNFHNFTTRIKPEDPSAKRFI 362
Query: 768 ISFDAKTTVNVEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIETALQKNVN 589
ISFDA TTV VEG+EFVKCE+VGQSFMLHQIRKM+GLAVAIMRNCAPESLIE ALQK+V+
Sbjct: 363 ISFDASTTVVVEGMEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVS 422
Query: 588 ITVPTAPEVGLYLDECFFTSYNNKWKDTHEEVSMKAYEDEAEEFKMKHIYPHIGSTENKE 409
ITVPTAPEVGLYLDECFFTSYN KWKDTHEEVSMKAYE EAE+FKM++IYPHI STE KE
Sbjct: 423 ITVPTAPEVGLYLDECFFTSYNQKWKDTHEEVSMKAYEKEAEDFKMQYIYPHIASTEYKE 482
Query: 408 GSVALWLHSLNHRNYPDLRVVK-DGITTDGK 319
G+V LWLHSLNHRNYPDLR++ +G+T D K
Sbjct: 483 GTVGLWLHSLNHRNYPDLRILDGEGVTNDKK 513
Score = 299 bits (765), Expect = 4e-78
Identities = 162/261 (62%), Positives = 185/261 (70%), Gaps = 17/261 (6%)
Frame = -3
Query: 1908 FFAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSA 1729
FFAYCGVGYQGMQKNPGAKTIE +LEEAL++SGAVPEQ+RG SKRYDWARSARTDKGVSA
Sbjct: 59 FFAYCGVGYQGMQKNPGAKTIEGELEEALYVSGAVPEQDRGLSKRYDWARSARTDKGVSA 118
Query: 1728 VGQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFAL 1549
VGQVVSGRFY+DPPG VDRLNSNL SQIRIFGFKRVT +FSAKKFCDRRRYVYLIP FAL
Sbjct: 119 VGQVVSGRFYIDPPGFVDRLNSNLPSQIRIFGFKRVTASFSAKKFCDRRRYVYLIPVFAL 178
Query: 1548 DPCSHPDRETVLASVGSENELVKCLECSDRGRKVVGVMG--KRSFEFRAL-------NSE 1396
DPC H DRETVLAS+GSENELVKCL CS+RGRKV GV+G KR+ E A+ N
Sbjct: 179 DPCCHRDRETVLASLGSENELVKCLPCSERGRKVEGVVGNSKRNLELEAVDVENGSSNKN 238
Query: 1395 TVVDXXXXXXXXXXXXXXXXXXXXXXSLDNDHDDNSKSVQNQDTILSSD----PMKVSSV 1228
VVD S++++ S N T++S + P+ S
Sbjct: 239 DVVDSGVTKDVEVSLSKGDDNHLNKESINDNEGKVSVEEVNSKTVVSDEDEVAPINGGSE 298
Query: 1227 T----IEDEEANAEEKLAKGS 1177
+E+E+ N E+ A GS
Sbjct: 299 NNLGILEEEKVNREDTAANGS 319
>ref|XP_006575306.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
X2 [Glycine max]
Length = 518
Score = 359 bits (922), Expect = 2e-96
Identities = 181/272 (66%), Positives = 215/272 (79%), Gaps = 7/272 (2%)
Frame = -3
Query: 1104 KDVMASLNNDDCLMSENETNKVLSNNGKSGM----AVETMVCVQNEGTVLESGSMENDKV 937
+DV SL+ D +N N+ N+ K GM +ET++ VQ EGT L S+ N +
Sbjct: 210 EDVEVSLSKGD----DNHLNEESGNDNKGGMNCKTGLETVIPVQEEGTPLNGESVNNSDI 265
Query: 936 TVKDE---EEKPARGSGFCYGEKEKVRFNRILNSYVGTHNFHNFTTRIKAEDPSAKRFII 766
+++ E+KP GS FCYGEKE+ RFN+IL +VGTHNFHNFTTR KAEDP+A+R+II
Sbjct: 266 LEEEKVNGEDKPTNGSRFCYGEKERERFNKILKCFVGTHNFHNFTTRTKAEDPAARRYII 325
Query: 765 SFDAKTTVNVEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIETALQKNVNI 586
SF+A TT+ VEG+EFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLI+ ALQ++VNI
Sbjct: 326 SFNANTTLVVEGVEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIDEALQQDVNI 385
Query: 585 TVPTAPEVGLYLDECFFTSYNNKWKDTHEEVSMKAYEDEAEEFKMKHIYPHIGSTENKEG 406
VPTAPEVGLYLDECFFTSYN KWKD HEE+SMKAYE EA+EFKMK+IY HI STE KEG
Sbjct: 386 NVPTAPEVGLYLDECFFTSYNQKWKD-HEELSMKAYEKEADEFKMKYIYSHIASTEQKEG 444
Query: 405 SVALWLHSLNHRNYPDLRVVKDGITTDGKSAE 310
+VALWLHSLNHRNYPDLRV+ + + KSA+
Sbjct: 445 TVALWLHSLNHRNYPDLRVINEEAIPNNKSAD 476
Score = 294 bits (753), Expect = 9e-77
Identities = 155/258 (60%), Positives = 183/258 (70%), Gaps = 14/258 (5%)
Frame = -3
Query: 1908 FFAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSA 1729
FFAYCGVGYQGMQKNPGAKTIE DLEEAL++SGAVPEQ+RG KRYDWARSARTDKGVSA
Sbjct: 25 FFAYCGVGYQGMQKNPGAKTIEGDLEEALYVSGAVPEQDRGVPKRYDWARSARTDKGVSA 84
Query: 1728 VGQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFAL 1549
VGQVVSGRFY+DPPGLVDRLNSNL SQIRIFG+KRVT +F+AKKFCDRRRYVYLIP FAL
Sbjct: 85 VGQVVSGRFYIDPPGLVDRLNSNLPSQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFAL 144
Query: 1548 DPCSHPDRETVLASVGSENELVKCLECSDRGRKVVGVMG--KRSFEFRALNSETVVDXXX 1375
DP H DRETV+AS+GS NELVKCLECS+RGRKVVG++G K++ E A++ E +
Sbjct: 145 DPSCHRDRETVMASLGSGNELVKCLECSERGRKVVGLVGNRKQNLELEAVDVEAGISSNR 204
Query: 1374 XXXXXXXXXXXXXXXXXXXSLDNDHDDNSKS------------VQNQDTILSSDPMKVSS 1231
+ +DN VQ + T L+ + + S
Sbjct: 205 DSGVTEDVEVSLSKGDDNHLNEESGNDNKGGMNCKTGLETVIPVQEEGTPLNGESVNNSD 264
Query: 1230 VTIEDEEANAEEKLAKGS 1177
+ +E+E+ N E+K GS
Sbjct: 265 I-LEEEKVNGEDKPTNGS 281
>ref|XP_003519139.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
X1 [Glycine max]
Length = 548
Score = 359 bits (922), Expect = 2e-96
Identities = 181/272 (66%), Positives = 215/272 (79%), Gaps = 7/272 (2%)
Frame = -3
Query: 1104 KDVMASLNNDDCLMSENETNKVLSNNGKSGM----AVETMVCVQNEGTVLESGSMENDKV 937
+DV SL+ D +N N+ N+ K GM +ET++ VQ EGT L S+ N +
Sbjct: 240 EDVEVSLSKGD----DNHLNEESGNDNKGGMNCKTGLETVIPVQEEGTPLNGESVNNSDI 295
Query: 936 TVKDE---EEKPARGSGFCYGEKEKVRFNRILNSYVGTHNFHNFTTRIKAEDPSAKRFII 766
+++ E+KP GS FCYGEKE+ RFN+IL +VGTHNFHNFTTR KAEDP+A+R+II
Sbjct: 296 LEEEKVNGEDKPTNGSRFCYGEKERERFNKILKCFVGTHNFHNFTTRTKAEDPAARRYII 355
Query: 765 SFDAKTTVNVEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIETALQKNVNI 586
SF+A TT+ VEG+EFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLI+ ALQ++VNI
Sbjct: 356 SFNANTTLVVEGVEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIDEALQQDVNI 415
Query: 585 TVPTAPEVGLYLDECFFTSYNNKWKDTHEEVSMKAYEDEAEEFKMKHIYPHIGSTENKEG 406
VPTAPEVGLYLDECFFTSYN KWKD HEE+SMKAYE EA+EFKMK+IY HI STE KEG
Sbjct: 416 NVPTAPEVGLYLDECFFTSYNQKWKD-HEELSMKAYEKEADEFKMKYIYSHIASTEQKEG 474
Query: 405 SVALWLHSLNHRNYPDLRVVKDGITTDGKSAE 310
+VALWLHSLNHRNYPDLRV+ + + KSA+
Sbjct: 475 TVALWLHSLNHRNYPDLRVINEEAIPNNKSAD 506
Score = 294 bits (753), Expect = 9e-77
Identities = 155/258 (60%), Positives = 183/258 (70%), Gaps = 14/258 (5%)
Frame = -3
Query: 1908 FFAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSA 1729
FFAYCGVGYQGMQKNPGAKTIE DLEEAL++SGAVPEQ+RG KRYDWARSARTDKGVSA
Sbjct: 55 FFAYCGVGYQGMQKNPGAKTIEGDLEEALYVSGAVPEQDRGVPKRYDWARSARTDKGVSA 114
Query: 1728 VGQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFAL 1549
VGQVVSGRFY+DPPGLVDRLNSNL SQIRIFG+KRVT +F+AKKFCDRRRYVYLIP FAL
Sbjct: 115 VGQVVSGRFYIDPPGLVDRLNSNLPSQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFAL 174
Query: 1548 DPCSHPDRETVLASVGSENELVKCLECSDRGRKVVGVMG--KRSFEFRALNSETVVDXXX 1375
DP H DRETV+AS+GS NELVKCLECS+RGRKVVG++G K++ E A++ E +
Sbjct: 175 DPSCHRDRETVMASLGSGNELVKCLECSERGRKVVGLVGNRKQNLELEAVDVEAGISSNR 234
Query: 1374 XXXXXXXXXXXXXXXXXXXSLDNDHDDNSKS------------VQNQDTILSSDPMKVSS 1231
+ +DN VQ + T L+ + + S
Sbjct: 235 DSGVTEDVEVSLSKGDDNHLNEESGNDNKGGMNCKTGLETVIPVQEEGTPLNGESVNNSD 294
Query: 1230 VTIEDEEANAEEKLAKGS 1177
+ +E+E+ N E+K GS
Sbjct: 295 I-LEEEKVNGEDKPTNGS 311