BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00004574
         (5825 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su...  2895   0.0  
ref|XP_007203058.1| hypothetical protein PRUPE_ppa000093mg [Prun...  2826   0.0  
ref|XP_004287766.1| PREDICTED: DNA-directed RNA polymerase II su...  2821   0.0  
ref|XP_004169177.1| PREDICTED: DNA-directed RNA polymerase II su...  2816   0.0  
ref|XP_004146161.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...  2816   0.0  
ref|XP_006383037.1| DNA-directed RNA polymerase II largest subun...  2811   0.0  
ref|XP_006828844.1| hypothetical protein AMTR_s00001p00152770 [A...  2810   0.0  
ref|XP_006590737.1| PREDICTED: DNA-directed RNA polymerase II su...  2805   0.0  
ref|XP_007157862.1| hypothetical protein PHAVU_002G104500g [Phas...  2805   0.0  
ref|XP_006425357.1| hypothetical protein CICLE_v10024686mg [Citr...  2800   0.0  
ref|XP_006467031.1| PREDICTED: DNA-directed RNA polymerase II su...  2799   0.0  
ref|XP_006467030.1| PREDICTED: DNA-directed RNA polymerase II su...  2799   0.0  
ref|XP_006467029.1| PREDICTED: DNA-directed RNA polymerase II su...  2799   0.0  
ref|XP_006467027.1| PREDICTED: DNA-directed RNA polymerase II su...  2799   0.0  
ref|XP_007046584.1| DNA-directed RNA polymerase II subunit RPB1 ...  2799   0.0  
ref|XP_004512182.1| PREDICTED: DNA-directed RNA polymerase II su...  2795   0.0  
ref|XP_002530639.1| DNA-directed RNA polymerase II largest subun...  2793   0.0  
gb|EYU42342.1| hypothetical protein MIMGU_mgv1a000091mg [Mimulus...  2793   0.0  
ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II su...  2792   0.0  
ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II su...  2791   0.0  

>ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Vitis
            vinifera]
          Length = 1848

 Score = 2895 bits (7506), Expect = 0.0
 Identities = 1426/1535 (92%), Positives = 1485/1535 (96%)
 Frame = -2

Query: 5641 MDTRFPFSPAEVAKVRMVQFGIISPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 5462
            MD RFP+SPAEVAKVRMVQFGI+SPDEIRQMSVVQIEH ETTERGKPK  GLSDPRLGTI
Sbjct: 1    MDMRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 60

Query: 5461 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHK 5282
            DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADE+DHK
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120

Query: 5281 FKLAQKVKNPKARLKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTI 5102
            FK AQK++NPK RLK+ILDACKNK+KCEGGDEIE Q  DS+EPVKK+RGGCGAQQPKLTI
Sbjct: 121  FKQAQKIRNPKNRLKKILDACKNKSKCEGGDEIETQALDSDEPVKKSRGGCGAQQPKLTI 180

Query: 5101 EGMKMIAEYKLQRKKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYAR 4922
            EGMKMIAEYK+QRKK+DD EQLPEPVERKQQLSAERVL+VLKRISDEDC LLGLNPKYAR
Sbjct: 181  EGMKMIAEYKIQRKKNDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCILLGLNPKYAR 240

Query: 4921 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 4742
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300

Query: 4741 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4562
            EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 4561 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 4382
            TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 4381 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4202
            EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 4201 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 4022
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 4021 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 3842
            LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAP ILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 600

Query: 3841 LMRTSAWHSESETGFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3662
            L+RTSAWHSESETGF+TPGDTQVRIE+GE++ GTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LLRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660

Query: 3661 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQL 3482
            RKFLGHTQWLVNYWLLQ  FSIGIGDTIADA+TMEKINETISKAKNEVKELIRAAQE+QL
Sbjct: 661  RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQERQL 720

Query: 3481 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 3302
            EAEPGRTMM+SFENRVNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3301 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3122
            ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 3121 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQR 2942
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+Q+
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900

Query: 2941 LDSLKMKKGEFNKVYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQ 2762
            LDSLKMKKGEF++V+ YE DDENWNPSY+LPEHV+DL+ IREFRNVFDAE++KLE DR Q
Sbjct: 901  LDSLKMKKGEFDRVFKYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRFQ 960

Query: 2761 LGKDIVTTGDDVWPMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVH 2582
            LG +I TTGD+ WPMPVNLKRLIWNAQKTFK+DLRRPS MHPMEIVEAVDKLQERLKVV 
Sbjct: 961  LGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 1020

Query: 2581 GDDPMSTEAQKNATLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASG 2402
            GDD +S EAQKNATLFFNILLRST ASKRVLKEYRLT+EAFEWV+GEIESRFLQSLVA G
Sbjct: 1021 GDDLISMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPG 1080

Query: 2401 EMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLK 2222
            EMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140

Query: 2221 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 2042
            P+V+KTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEED+DFVKSYYEMPDEE+
Sbjct: 1141 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEV 1200

Query: 2041 SPDKISPWLLRVELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1862
            +P+KISPWLLR+ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260

Query: 1861 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMP 1682
            NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K  +FD+ EGF P
Sbjct: 1261 NDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDESEGFKP 1320

Query: 1681 EVEWMLDTEGVNLLAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDG 1502
            EVEWMLDTEGVNLLAV+CHEDVDA RTTSNHLIEV+EVLGIEAVR+SLLDELRVVISFDG
Sbjct: 1321 EVEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380

Query: 1501 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1322
            SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD 
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDF 1440

Query: 1321 LRGVTENIMLGQLAPIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIMGTP 1142
            LRGVTENIMLGQLAPIGTGDCALYLND+ML+HAI+LQLPSYMEGLDFGMTPSRSPI GTP
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDQMLQHAIELQLPSYMEGLDFGMTPSRSPITGTP 1500

Query: 1141 YRDGMMSPNYMLSPNLRLSPTNDAQFSPYVGGMAF 1037
            Y DGMMSPNY+LSPNLRLSP  DAQFSPYVGGMAF
Sbjct: 1501 YHDGMMSPNYLLSPNLRLSPITDAQFSPYVGGMAF 1535


>ref|XP_007203058.1| hypothetical protein PRUPE_ppa000093mg [Prunus persica]
            gi|462398589|gb|EMJ04257.1| hypothetical protein
            PRUPE_ppa000093mg [Prunus persica]
          Length = 1844

 Score = 2826 bits (7325), Expect = 0.0
 Identities = 1392/1535 (90%), Positives = 1462/1535 (95%)
 Frame = -2

Query: 5641 MDTRFPFSPAEVAKVRMVQFGIISPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 5462
            MD RFPFSPAEVAKVR VQFGI+SPDEIRQMSVVQIEH ET   GKPK AGLSDPRLGTI
Sbjct: 1    MDIRFPFSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHSETMLGGKPKTAGLSDPRLGTI 60

Query: 5461 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHK 5282
            DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKIL DEDDHK
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDEDDHK 120

Query: 5281 FKLAQKVKNPKARLKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTI 5102
            FK A ++K+PK RLK+ILDACKNKTKC+GGDEI+ QG++SEEPVKK+RGGCGAQQPKL+I
Sbjct: 121  FKQALRIKSPKNRLKKILDACKNKTKCDGGDEIDVQGQESEEPVKKSRGGCGAQQPKLSI 180

Query: 5101 EGMKMIAEYKLQRKKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYAR 4922
            EGMKM AEYK QRKKSDDQEQLPEPVERKQ L+AERVLSVLKRISDED  LLGLNPKYAR
Sbjct: 181  EGMKMNAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDSQLLGLNPKYAR 240

Query: 4921 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 4742
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNG+PAHIIS
Sbjct: 241  PDWMILQVLPIPPQPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300

Query: 4741 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4562
            EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 4561 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 4382
            TVITPDP INIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 420

Query: 4381 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4202
            +DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 4201 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 4022
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 4021 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 3842
            LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600

Query: 3841 LMRTSAWHSESETGFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3662
            L RTSAWHSE+E+G +TPGDT VRIE+GE++ GTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LQRTSAWHSEAESGNITPGDTFVRIEKGELLAGTLCKKALGTSTGSLIHVIWEEVGPDAA 660

Query: 3661 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQL 3482
            RKFLGHTQWLVNYWLLQ AFSIGIGDTIADA+TMEKINETISKAKNEVK+LI  AQ KQL
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNEVKDLISKAQSKQL 720

Query: 3481 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 3302
            EAEPGRTMMDSFEN+VNQVLN+ARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EAEPGRTMMDSFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3301 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3122
            ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 3121 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQR 2942
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ+
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900

Query: 2941 LDSLKMKKGEFNKVYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQ 2762
            LDSLKMKK EF+K + YE DDENWNP Y+L EHV+DL+ IREFRNVFDAE++KLE DRLQ
Sbjct: 901  LDSLKMKKSEFDKTFSYELDDENWNPDYMLHEHVEDLKTIREFRNVFDAEVQKLETDRLQ 960

Query: 2761 LGKDIVTTGDDVWPMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVH 2582
            LG +I  TGD+ WP+PVNLKRLIWNAQKTFKID RR S MHPMEIVEA+DKLQERLKVV 
Sbjct: 961  LGTEIAVTGDNSWPLPVNLKRLIWNAQKTFKIDFRRTSDMHPMEIVEAIDKLQERLKVVP 1020

Query: 2581 GDDPMSTEAQKNATLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASG 2402
            GDD +S EAQKNATLFF+ILLRST ASKRVL EYRLT+EAFEWV+GEIESRFLQSLVA G
Sbjct: 1021 GDDLLSVEAQKNATLFFSILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080

Query: 2401 EMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLK 2222
            EMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AK+IKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140

Query: 2221 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 2042
            PE NKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEED+DFV SYYEMPDEE+
Sbjct: 1141 PEANKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVNSYYEMPDEEV 1200

Query: 2041 SPDKISPWLLRVELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1862
            +PDKISPWLLR+ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 NPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260

Query: 1861 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMP 1682
            N EAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K  +FD +EGF  
Sbjct: 1261 NAEAPKGELVDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHGKVNKFDPNEGFKA 1320

Query: 1681 EVEWMLDTEGVNLLAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDG 1502
            E EWMLDTEGVNLLAV+CH+DVDA RTTSNHLIE++E+LGIEAVR+SLLDELRVVISFDG
Sbjct: 1321 EQEWMLDTEGVNLLAVLCHDDVDARRTTSNHLIEILEILGIEAVRRSLLDELRVVISFDG 1380

Query: 1501 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1322
            SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETD+
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDY 1440

Query: 1321 LRGVTENIMLGQLAPIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIMGTP 1142
            LRGVTENIMLGQLAPIGTGDCALYLND+ML++AI+LQLPSYM+GLDFGMTPSRSP+ GTP
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYMDGLDFGMTPSRSPVSGTP 1500

Query: 1141 YRDGMMSPNYMLSPNLRLSPTNDAQFSPYVGGMAF 1037
            Y +GMMSPNY+LSPNLRLSP +DAQFSPYVGGMAF
Sbjct: 1501 YHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAF 1535


>ref|XP_004287766.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Fragaria
            vesca subsp. vesca]
          Length = 1842

 Score = 2821 bits (7314), Expect = 0.0
 Identities = 1386/1535 (90%), Positives = 1460/1535 (95%)
 Frame = -2

Query: 5641 MDTRFPFSPAEVAKVRMVQFGIISPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 5462
            MD RFPFSP EVAKVR VQFGI+SPDEIRQMSVVQIEH ET   GKPK AGLSDPRLGTI
Sbjct: 1    MDIRFPFSPCEVAKVRRVQFGILSPDEIRQMSVVQIEHSETMLGGKPKTAGLSDPRLGTI 60

Query: 5461 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHK 5282
            DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKIL DEDDHK
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDEDDHK 120

Query: 5281 FKLAQKVKNPKARLKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTI 5102
            FK A ++KNPK RLK+ILDACKNKTKCEGGDEI+ Q  D++EP+KK+RGGCGAQQPKLTI
Sbjct: 121  FKTALRIKNPKNRLKKILDACKNKTKCEGGDEIDVQ--DTDEPLKKSRGGCGAQQPKLTI 178

Query: 5101 EGMKMIAEYKLQRKKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYAR 4922
            +GMKM+AEYK QRKKSDDQEQLPEPVERKQ L+AERVLSVLKRISDEDC LLGLNPKYAR
Sbjct: 179  DGMKMVAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 238

Query: 4921 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 4742
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNG+PAHIIS
Sbjct: 239  PDWMILQVLPIPPQPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 298

Query: 4741 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4562
            EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 299  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 358

Query: 4561 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 4382
            TVITPDP INIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 359  TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 418

Query: 4381 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4202
            +DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 419  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 478

Query: 4201 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 4022
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 479  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 538

Query: 4021 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 3842
            LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 539  LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 598

Query: 3841 LMRTSAWHSESETGFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3662
            L RTSAWHSESETG +TPGDT VRIE+GE+++GTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 599  LQRTSAWHSESETGNITPGDTHVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 658

Query: 3661 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQL 3482
            RKFLGHTQWLVNYWLLQ AFSIGIGDTIADA+TMEKINETISKAKNEVKELI  AQ K L
Sbjct: 659  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNEVKELISKAQSKSL 718

Query: 3481 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 3302
            E EPGRTMMDSFEN+VNQVLN+ARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 719  EPEPGRTMMDSFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 778

Query: 3301 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3122
            ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 779  ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 838

Query: 3121 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQR 2942
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ+
Sbjct: 839  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 898

Query: 2941 LDSLKMKKGEFNKVYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQ 2762
            LDSLKMKK EF+K + Y FDDENWNP Y+LPEHV+DL+ IREFRNVFDAE+ KLE DRLQ
Sbjct: 899  LDSLKMKKKEFDKTFAYVFDDENWNPDYMLPEHVEDLKTIREFRNVFDAEVSKLETDRLQ 958

Query: 2761 LGKDIVTTGDDVWPMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVH 2582
            LG +I  TGD+ WP+PVNLKRLIWNAQKTFKID RR S MHPMEIVEA+DKLQERL+VV 
Sbjct: 959  LGTEIAVTGDNSWPLPVNLKRLIWNAQKTFKIDFRRTSDMHPMEIVEAIDKLQERLRVVP 1018

Query: 2581 GDDPMSTEAQKNATLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASG 2402
            GDD +S EAQKNATLFFNILLRST ASKRVL+EYRLT+EAFEWV+GEIESRFLQSLVA G
Sbjct: 1019 GDDLLSVEAQKNATLFFNILLRSTFASKRVLEEYRLTREAFEWVIGEIESRFLQSLVAPG 1078

Query: 2401 EMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLK 2222
            EMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AK+IKTPSLSVYLK
Sbjct: 1079 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1138

Query: 2221 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 2042
            PE NKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMST+IEED+DFV+SYYEMPDEE+
Sbjct: 1139 PEANKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDLDFVRSYYEMPDEEV 1198

Query: 2041 SPDKISPWLLRVELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1862
            +PDKISPWLLR+ELNREMMVDKKLSMADIAEKINLEFD DLTCIFNDDNAEKLILRIRIM
Sbjct: 1199 NPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDGDLTCIFNDDNAEKLILRIRIM 1258

Query: 1861 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMP 1682
            N+E PKG+  DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K  +FD +EGF  
Sbjct: 1259 NEETPKGDSQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHGKVNKFDQNEGFKA 1318

Query: 1681 EVEWMLDTEGVNLLAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDG 1502
            E EWMLDTEGVNLLAV+CH+DVDA RTTSNHLIE++EVLGIEAVR+SLLDELRVVISFDG
Sbjct: 1319 EQEWMLDTEGVNLLAVLCHDDVDAKRTTSNHLIEIIEVLGIEAVRRSLLDELRVVISFDG 1378

Query: 1501 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1322
            SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDA+V+AETDH
Sbjct: 1379 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDASVFAETDH 1438

Query: 1321 LRGVTENIMLGQLAPIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIMGTP 1142
            LRGVTENIMLGQLAPIGTGDCALYLND+ML++AI+LQLPSY++GLDFGMTPSRSP+ GTP
Sbjct: 1439 LRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYVDGLDFGMTPSRSPVSGTP 1498

Query: 1141 YRDGMMSPNYMLSPNLRLSPTNDAQFSPYVGGMAF 1037
            +RDGMMSPNY+LSPN+R+SP +DAQFSPYVGGMAF
Sbjct: 1499 FRDGMMSPNYLLSPNMRMSPISDAQFSPYVGGMAF 1533


>ref|XP_004169177.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Cucumis
            sativus]
          Length = 1853

 Score = 2816 bits (7301), Expect = 0.0
 Identities = 1384/1535 (90%), Positives = 1465/1535 (95%)
 Frame = -2

Query: 5641 MDTRFPFSPAEVAKVRMVQFGIISPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 5462
            MD RFP+SPAEVAKVRMVQFGI+SPDEIRQMSVVQIEHGETTERGKPK+AGLSDPRLGTI
Sbjct: 1    MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTI 60

Query: 5461 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHK 5282
            DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVL+IMR VCFNCSKIL DE+D K
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120

Query: 5281 FKLAQKVKNPKARLKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTI 5102
            FK A ++KNPK RL++ILDACKNKTKCEGGDEI+ QG+DS++PVKK+RGGCGAQQPK++I
Sbjct: 121  FKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQDSDQPVKKSRGGCGAQQPKISI 180

Query: 5101 EGMKMIAEYKLQRKKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYAR 4922
            EGMKM AEYK QRKK+DD EQLPEPVERKQ L+AERVL +LKRI+DEDC LLGLNPKYAR
Sbjct: 181  EGMKMTAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLGILKRITDEDCKLLGLNPKYAR 240

Query: 4921 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 4742
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNG+PAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300

Query: 4741 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4562
            EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 4561 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 4382
            TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 4381 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4202
            +DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 4201 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 4022
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 4021 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 3842
            LLGCRKITKRDTFI KDVFMN LMWWEDFDGK+PAP ILKP+PLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFITKDVFMNTLMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN 600

Query: 3841 LMRTSAWHSESETGFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3662
            L RTSAWHSESETG +TPGDT VRIE+GE+++GTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LTRTSAWHSESETGHITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660

Query: 3661 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQL 3482
            RKFLGHTQWLVNYWLLQ AFSIGIGDTIADA+TMEKINETIS AKNEVK LI+ AQE+ L
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSL 720

Query: 3481 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 3302
            E EPGRTMMDSFEN+VNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3301 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3122
            ACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 3121 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQR 2942
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ+
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900

Query: 2941 LDSLKMKKGEFNKVYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQ 2762
            LDSLKMKK EF +++ YEF+DENW P+Y+LPEHV+DL+ IREFRNVF+AE++KLE DR Q
Sbjct: 901  LDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQ 960

Query: 2761 LGKDIVTTGDDVWPMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVH 2582
            LG +I TTG++ WPMPVNLKRLI NAQKTFKID RR S MHPMEIVEA+DKLQERLKVV 
Sbjct: 961  LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP 1020

Query: 2581 GDDPMSTEAQKNATLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASG 2402
            G+DP+S EAQKNATLFFNILLRST ASKRVL EYRLT+EAFEWV+GEIESRFLQSLVA G
Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080

Query: 2401 EMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLK 2222
            EMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AK+IKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140

Query: 2221 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 2042
            PE NKTKERAK VQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI
Sbjct: 1141 PEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 1200

Query: 2041 SPDKISPWLLRVELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1862
            +P+KISPWLLR+ELNREMMVDKKLSMA+IAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260

Query: 1861 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMP 1682
            NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK  K  +FD++EGF P
Sbjct: 1261 NDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKP 1320

Query: 1681 EVEWMLDTEGVNLLAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDG 1502
            E+EWMLDTEGVNLLAV+ HEDVDA RTTSNHLIEV+EVLGIEAVR+SLLDELRVVISFDG
Sbjct: 1321 EMEWMLDTEGVNLLAVMTHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380

Query: 1501 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1322
            SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1440

Query: 1321 LRGVTENIMLGQLAPIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIMGTP 1142
            LRGVTENIMLGQLAPIGTG CALYLND+ML++AI+LQLPSY++GLDFGMTPSRSPI GTP
Sbjct: 1441 LRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTP 1500

Query: 1141 YRDGMMSPNYMLSPNLRLSPTNDAQFSPYVGGMAF 1037
            Y +GMMSPNY+LSPNLRLSP +DAQFSPYVGGMAF
Sbjct: 1501 YHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAF 1535


>ref|XP_004146161.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
            subunit RPB1-like [Cucumis sativus]
          Length = 1832

 Score = 2816 bits (7301), Expect = 0.0
 Identities = 1384/1535 (90%), Positives = 1465/1535 (95%)
 Frame = -2

Query: 5641 MDTRFPFSPAEVAKVRMVQFGIISPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 5462
            MD RFP+SPAEVAKVRMVQFGI+SPDEIRQMSVVQIEHGETTERGKPK+AGLSDPRLGTI
Sbjct: 1    MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTI 60

Query: 5461 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHK 5282
            DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVL+IMR VCFNCSKIL DE+D K
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120

Query: 5281 FKLAQKVKNPKARLKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTI 5102
            FK A ++KNPK RL++ILDACKNKTKCEGGDEI+ QG+DS++PVKK+RGGCGAQQPK++I
Sbjct: 121  FKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQDSDQPVKKSRGGCGAQQPKISI 180

Query: 5101 EGMKMIAEYKLQRKKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYAR 4922
            EGMKM AEYK QRKK+DD EQLPEPVERKQ L+AERVL +LKRI+DEDC LLGLNPKYAR
Sbjct: 181  EGMKMTAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLGILKRITDEDCKLLGLNPKYAR 240

Query: 4921 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 4742
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNG+PAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300

Query: 4741 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4562
            EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 4561 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 4382
            TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 4381 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4202
            +DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 4201 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 4022
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 4021 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 3842
            LLGCRKITKRDTFI KDVFMN LMWWEDFDGK+PAP ILKP+PLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFITKDVFMNTLMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN 600

Query: 3841 LMRTSAWHSESETGFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3662
            L RTSAWHSESETG +TPGDT VRIE+GE+++GTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LTRTSAWHSESETGHITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660

Query: 3661 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQL 3482
            RKFLGHTQWLVNYWLLQ AFSIGIGDTIADA+TMEKINETIS AKNEVK LI+ AQE+ L
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSL 720

Query: 3481 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 3302
            E EPGRTMMDSFEN+VNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3301 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3122
            ACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 3121 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQR 2942
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ+
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900

Query: 2941 LDSLKMKKGEFNKVYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQ 2762
            LDSLKMKK EF +++ YEF+DENW P+Y+LPEHV+DL+ IREFRNVF+AE++KLE DR Q
Sbjct: 901  LDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQ 960

Query: 2761 LGKDIVTTGDDVWPMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVH 2582
            LG +I TTG++ WPMPVNLKRLI NAQKTFKID RR S MHPMEIVEA+DKLQERLKVV 
Sbjct: 961  LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP 1020

Query: 2581 GDDPMSTEAQKNATLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASG 2402
            G+DP+S EAQKNATLFFNILLRST ASKRVL EYRLT+EAFEWV+GEIESRFLQSLVA G
Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080

Query: 2401 EMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLK 2222
            EMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AK+IKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140

Query: 2221 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 2042
            PE NKTKERAK VQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI
Sbjct: 1141 PEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 1200

Query: 2041 SPDKISPWLLRVELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1862
            +P+KISPWLLR+ELNREMMVDKKLSMA+IAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260

Query: 1861 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMP 1682
            NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK  K  +FD++EGF P
Sbjct: 1261 NDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKP 1320

Query: 1681 EVEWMLDTEGVNLLAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDG 1502
            E+EWMLDTEGVNLLAV+ HEDVDA RTTSNHLIEV+EVLGIEAVR+SLLDELRVVISFDG
Sbjct: 1321 EMEWMLDTEGVNLLAVMTHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380

Query: 1501 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1322
            SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1440

Query: 1321 LRGVTENIMLGQLAPIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIMGTP 1142
            LRGVTENIMLGQLAPIGTG CALYLND+ML++AI+LQLPSY++GLDFGMTPSRSPI GTP
Sbjct: 1441 LRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTP 1500

Query: 1141 YRDGMMSPNYMLSPNLRLSPTNDAQFSPYVGGMAF 1037
            Y +GMMSPNY+LSPNLRLSP +DAQFSPYVGGMAF
Sbjct: 1501 YHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAF 1535


>ref|XP_006383037.1| DNA-directed RNA polymerase II largest subunit family protein
            [Populus trichocarpa] gi|550338614|gb|ERP60834.1|
            DNA-directed RNA polymerase II largest subunit family
            protein [Populus trichocarpa]
          Length = 1837

 Score = 2811 bits (7287), Expect = 0.0
 Identities = 1388/1538 (90%), Positives = 1471/1538 (95%), Gaps = 3/1538 (0%)
 Frame = -2

Query: 5641 MDTRFPFSPAEVAKVRMVQFGIISPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 5462
            MDTRFP+SPAEVAKVRMVQFGI+SPDEIRQMSV+QIEH ETTERGKPK  GLSDPRLGTI
Sbjct: 1    MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVIQIEHSETTERGKPKPGGLSDPRLGTI 60

Query: 5461 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHK 5282
            DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADE+DHK
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120

Query: 5281 FKLAQKVKNPKARLKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTI 5102
            FK A K+KNPK+RLK+ILDACKNKTKCEGGDEI+ QG+D+EEPVKK+RGGCGAQQPKLTI
Sbjct: 121  FKQALKIKNPKSRLKKILDACKNKTKCEGGDEIDVQGQDNEEPVKKSRGGCGAQQPKLTI 180

Query: 5101 EGMKMIAEYKLQRKKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYAR 4922
            EGMKMIAEYK+QRKKSDDQEQLPEPVERKQ L+AERVLSVLKRISDEDC LLGL+PKYAR
Sbjct: 181  EGMKMIAEYKVQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLDPKYAR 240

Query: 4921 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 4742
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQER+GAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERSGAPAHIIS 300

Query: 4741 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4562
            EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 4561 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 4382
            TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 4381 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4202
            +DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 4201 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 4022
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 4021 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 3842
            LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTI+KPRPLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTIVKPRPLWTGKQVFNLIIPKQIN 600

Query: 3841 LMRTSAWHSESETGFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3662
            L+RT+AWH +SE G +TPGDT VRIE+GE+++GTLCKKTLGTS+GSLIHVIWEEVGPDAA
Sbjct: 601  LIRTAAWHMDSERGMITPGDTLVRIEKGELLSGTLCKKTLGTSSGSLIHVIWEEVGPDAA 660

Query: 3661 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQL 3482
            RKFLGHTQWLVNYWLLQ AFSIGIGDTIADASTMEKINETIS AKNEVK+LIR AQ K+L
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISNAKNEVKDLIRKAQNKEL 720

Query: 3481 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 3302
            EAEPGRTMM+SFENRVNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3301 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3122
            ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 3121 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQR 2942
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ+
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 900

Query: 2941 LDSLKMKKGEFNKVYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQ 2762
            LDSLKMKK EF++V+ YEFDDE+WNP+Y++ +HV+DL+NIRE R+VFDAE++KLE DR Q
Sbjct: 901  LDSLKMKKAEFDRVFRYEFDDEDWNPTYMMTDHVEDLRNIRELRDVFDAEVQKLEADRYQ 960

Query: 2761 LGKDIVTTGDDVWPMPVNLKRLIWNAQKTFKIDLR--RPSGMHPMEIVEAVDKLQERLKV 2588
            LG +I TTGD+ WPMPVNLKRLIWNAQKTFKID R  R S +HPME VEAVDKLQERLKV
Sbjct: 961  LGTEIATTGDNTWPMPVNLKRLIWNAQKTFKIDTRIGRVSDIHPMEAVEAVDKLQERLKV 1020

Query: 2587 VHGDDPMSTEAQKNATLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVA 2408
            V GDD +S EAQKNATLFF ILLRSTLASKRVL+EYRL++EAF+WV+GEIESRFLQSLVA
Sbjct: 1021 VPGDDLLSVEAQKNATLFFGILLRSTLASKRVLQEYRLSREAFDWVIGEIESRFLQSLVA 1080

Query: 2407 SGEMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVY 2228
             GEMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AKKIKTPSLSVY
Sbjct: 1081 PGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVY 1140

Query: 2227 LKPEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDE 2048
            LKPE NKTKE+AKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEED DFVKSYYEMPDE
Sbjct: 1141 LKPEFNKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDADFVKSYYEMPDE 1200

Query: 2047 EISPDKISPWLLRVELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIR 1868
            E++P+KISPWLLR+ELNREMM+DKKL+MADIAEKIN EFDDDLTCIFNDDNAEKLILRIR
Sbjct: 1201 EVAPEKISPWLLRIELNREMMIDKKLNMADIAEKINHEFDDDLTCIFNDDNAEKLILRIR 1260

Query: 1867 IMNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGF 1688
            IMNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKN K   FD+ EGF
Sbjct: 1261 IMNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNAKVSSFDESEGF 1320

Query: 1687 MPEVEWMLDTEGVNLLAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISF 1508
                EWMLDTEGVNLLAV+C+E+VDA +TTSNHLIEV+EV+GIEAVR+SLLDELRVVISF
Sbjct: 1321 KTTEEWMLDTEGVNLLAVMCNENVDARKTTSNHLIEVIEVIGIEAVRRSLLDELRVVISF 1380

Query: 1507 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAET 1328
            DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAET
Sbjct: 1381 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAET 1440

Query: 1327 DHLRGVTENIMLGQLAPIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIMG 1148
            D+LRGVTENIMLGQLAPIGTG CALYLND+ML++AI+LQLPSYMEGLDFGMTP+RSP+ G
Sbjct: 1441 DYLRGVTENIMLGQLAPIGTGYCALYLNDEMLKNAIELQLPSYMEGLDFGMTPARSPVSG 1500

Query: 1147 TPYRDGMMSPNYMLSPNLRLSPTND-AQFSPYVGGMAF 1037
            TPY DGMMSP  ++SPNLR+SPT D   FSPYVGGMAF
Sbjct: 1501 TPYHDGMMSP-MLMSPNLRMSPTVDGVAFSPYVGGMAF 1537


>ref|XP_006828844.1| hypothetical protein AMTR_s00001p00152770 [Amborella trichopoda]
            gi|548833823|gb|ERM96260.1| hypothetical protein
            AMTR_s00001p00152770 [Amborella trichopoda]
          Length = 1844

 Score = 2810 bits (7284), Expect = 0.0
 Identities = 1382/1538 (89%), Positives = 1473/1538 (95%), Gaps = 3/1538 (0%)
 Frame = -2

Query: 5641 MDTRFPFSPAEVAKVRMVQFGIISPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 5462
            MD RFP+SPAEVAKVR+VQFGI+SP+EIR MSVV+I+H ET ERGKPK +GLSDPRLGTI
Sbjct: 1    MDMRFPYSPAEVAKVRVVQFGILSPEEIRNMSVVEIQHSETMERGKPKPSGLSDPRLGTI 60

Query: 5461 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHK 5282
            DRKMKC+TCTANMAECPGHFGHLELAKPMFHIGF+KTVLSIMRCVCFNCS+ILADE+DH+
Sbjct: 61   DRKMKCDTCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSRILADEEDHR 120

Query: 5281 FKLAQKVKNPKARLKRILDACKNKTKCEGGDEI-EGQGRDSEEPVKKAR-GGCGAQQPKL 5108
            FK A K++NPK RLK++LD CKNKTKCEGGD+I E Q +DSEE VKK R GGCGAQQPK+
Sbjct: 121  FKQALKIRNPKTRLKKVLDCCKNKTKCEGGDDIDEDQAQDSEEVVKKKRHGGCGAQQPKI 180

Query: 5107 TIEGMKMIAEYKLQRKKSDDQEQ-LPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPK 4931
            TIEGMKM+AEYKL RKK+D+QEQ LPEPVERKQQL+AE+VL+VLKRI+DEDC LLGLNPK
Sbjct: 181  TIEGMKMVAEYKLPRKKNDEQEQMLPEPVERKQQLAAEKVLNVLKRITDEDCQLLGLNPK 240

Query: 4930 YARPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAH 4751
            YARPDWMILQV+        PSVMMDTSSRSEDDLTHQLAM+IRHNENL+RQE+NGAPAH
Sbjct: 241  YARPDWMILQVMPIPPPPVRPSVMMDTSSRSEDDLTHQLAMVIRHNENLKRQEKNGAPAH 300

Query: 4750 IISEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 4571
            IISEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF
Sbjct: 301  IISEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 360

Query: 4570 SARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKY 4391
            SARTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKY
Sbjct: 361  SARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKY 420

Query: 4390 IIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 4211
            IIREDGQRLDLRYLKKS DHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP
Sbjct: 421  IIREDGQRLDLRYLKKSGDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 480

Query: 4210 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIV 4031
            YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIV
Sbjct: 481  YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIV 540

Query: 4030 QDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPK 3851
            QDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAP ILKPRPLWTGKQVFNLIIPK
Sbjct: 541  QDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPK 600

Query: 3850 QINLMRTSAWHSESETGFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGP 3671
            QINL+R SAWHSESE+GF+TPGDT VRIERGE+++GTLCKKTLGTS+GSLIHVIWEEVGP
Sbjct: 601  QINLIRYSAWHSESESGFITPGDTCVRIERGELLSGTLCKKTLGTSSGSLIHVIWEEVGP 660

Query: 3670 DAARKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQE 3491
            DAARKFLGHTQWLVNYWLLQQAFSIGIGDTIADA+TMEKINETISKAKNEVKELI+AAQE
Sbjct: 661  DAARKFLGHTQWLVNYWLLQQAFSIGIGDTIADAATMEKINETISKAKNEVKELIKAAQE 720

Query: 3490 KQLEAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINIS 3311
            KQLEAEPGRTMM+SFENRVNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINIS
Sbjct: 721  KQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINIS 780

Query: 3310 QMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMG 3131
            QMTACVGQQNVEGKRIP+GF DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMG
Sbjct: 781  QMTACVGQQNVEGKRIPFGFNDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMG 840

Query: 3130 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 2951
            GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE
Sbjct: 841  GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 900

Query: 2950 SQRLDSLKMKKGEFNKVYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEED 2771
            SQ+LDSLKMK+ EF  VY YE D ENW+PSY+LPEHV+DL+ IREF+NVFDAE++KLE D
Sbjct: 901  SQKLDSLKMKRAEFENVYKYEIDQENWSPSYMLPEHVEDLKTIREFQNVFDAEVQKLEAD 960

Query: 2770 RLQLGKDIVTTGDDVWPMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLK 2591
            R QLG +I TTGD+ WPMPVNLKRLIWNAQK FK+DLRRPS MHPMEIVEAVDKLQERLK
Sbjct: 961  RHQLGTEITTTGDNSWPMPVNLKRLIWNAQKMFKVDLRRPSDMHPMEIVEAVDKLQERLK 1020

Query: 2590 VVHGDDPMSTEAQKNATLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLV 2411
            VV GDD MS EAQKNATLFFNILLRST ASKRVLKEYRLT+EAF+WV+GEIESRFLQSLV
Sbjct: 1021 VVPGDDLMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESRFLQSLV 1080

Query: 2410 ASGEMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSV 2231
            A GEMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AKKIKTPSLSV
Sbjct: 1081 APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV 1140

Query: 2230 YLKPEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPD 2051
            YLK EVNKTKE+AKNVQCALEYTTLRSVT+ATEVWYDPDPMSTIIEED+DFV+SYYEMPD
Sbjct: 1141 YLKHEVNKTKEKAKNVQCALEYTTLRSVTEATEVWYDPDPMSTIIEEDVDFVRSYYEMPD 1200

Query: 2050 EEISPDKISPWLLRVELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRI 1871
            EE++P+KISPWLLR+ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRI
Sbjct: 1201 EEVAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRI 1260

Query: 1870 RIMNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEG 1691
            RIMNDEAPKGEL DES+EDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K  +FD++EG
Sbjct: 1261 RIMNDEAPKGELQDESSEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKINKFDENEG 1320

Query: 1690 FMPEVEWMLDTEGVNLLAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVIS 1511
            F PE+EWMLDTEGVNLLAV+C+E+VDATRTTSNHLIEV++VLGIEAVR++LLDELRVVIS
Sbjct: 1321 FKPEIEWMLDTEGVNLLAVMCNEEVDATRTTSNHLIEVIQVLGIEAVRRALLDELRVVIS 1380

Query: 1510 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE 1331
            FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE
Sbjct: 1381 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE 1440

Query: 1330 TDHLRGVTENIMLGQLAPIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIM 1151
             DHLRGVTENIMLGQLAPIGTGDCALYLND+ML+ AI+LQLPSYMEG+DFGMTPSRSP+ 
Sbjct: 1441 ADHLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSYMEGMDFGMTPSRSPMT 1500

Query: 1150 GTPYRDGMMSPNYMLSPNLRLSPTNDAQFSPYVGGMAF 1037
            GTPY +GMMSP Y+LSPN+R SP  DAQFSPYVGGMAF
Sbjct: 1501 GTPYHEGMMSP-YLLSPNMRSSPITDAQFSPYVGGMAF 1537


>ref|XP_006590737.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Glycine
            max]
          Length = 1827

 Score = 2805 bits (7272), Expect = 0.0
 Identities = 1377/1535 (89%), Positives = 1466/1535 (95%)
 Frame = -2

Query: 5641 MDTRFPFSPAEVAKVRMVQFGIISPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 5462
            MD RFPFSPAEVAKVRMVQFGI+SPDEIRQMSVVQIEHGETTERGKPK+ GLSDPRLGTI
Sbjct: 1    MDIRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60

Query: 5461 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHK 5282
            DRK+KCETCTA+MAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKILADE+DHK
Sbjct: 61   DRKLKCETCTASMAECPGHFGHLELAKPMFHIGFLKTVLTIMRCVCFNCSKILADENDHK 120

Query: 5281 FKLAQKVKNPKARLKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTI 5102
            FK A +++NPK RLK+ILDACKNK+KCEGGDEI+  G+D++EPVKK+RGGCGAQQPK+TI
Sbjct: 121  FKQALRIRNPKNRLKKILDACKNKSKCEGGDEIDIPGQDTDEPVKKSRGGCGAQQPKITI 180

Query: 5101 EGMKMIAEYKLQRKKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYAR 4922
            EGMKMIAEYK QRKKSDDQEQLPEPVERKQ LSAERVL VLKRISDEDC LLGLNPKYAR
Sbjct: 181  EGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 4921 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 4742
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNG+PAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIIS 300

Query: 4741 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4562
            EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 4561 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 4382
            TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 4381 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4202
            +DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 4201 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 4022
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 4021 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 3842
            LLGCRKITKRDTFI KDVFMNILMWWEDFDGKVPAP ILKP PLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFITKDVFMNILMWWEDFDGKVPAPAILKPEPLWTGKQVFNLIIPKQIN 600

Query: 3841 LMRTSAWHSESETGFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3662
            L+R S+WHSESE G +TPGDT VRIE+GE++TGTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LIRYSSWHSESERGSITPGDTMVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660

Query: 3661 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQL 3482
            RKFLGHTQWLVNYWLLQ AFSIGIGDTIADASTME IN+TIS AK +VK+LIR AQEK+L
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMETINQTISAAKEKVKQLIREAQEKKL 720

Query: 3481 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 3302
            EAEPGRTMMDSFENRVNQ LN+ARDDAG+SAQKSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EAEPGRTMMDSFENRVNQTLNRARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3301 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3122
            ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 3121 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQR 2942
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+Q+
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900

Query: 2941 LDSLKMKKGEFNKVYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQ 2762
            LDSLKMKK EF++V+ YEFDDENW P+Y+L E V+DL+ IREFRNVF+AE++KLE DR Q
Sbjct: 901  LDSLKMKKTEFDRVFRYEFDDENWKPTYMLEEPVEDLKTIREFRNVFEAEVQKLEADRYQ 960

Query: 2761 LGKDIVTTGDDVWPMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVH 2582
            L  +I TTGD   P+PVNLKRLIWNAQKTFK+D RRPS MHPMEIVEA+DKLQERLKVV 
Sbjct: 961  LATEIATTGDSSLPLPVNLKRLIWNAQKTFKVDFRRPSDMHPMEIVEAIDKLQERLKVVP 1020

Query: 2581 GDDPMSTEAQKNATLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASG 2402
            G+D +S EAQKNATL FNILLRST ASKRVL+EYRL++EAFEWVVGEIESRFLQSLVASG
Sbjct: 1021 GEDLLSQEAQKNATLLFNILLRSTFASKRVLEEYRLSREAFEWVVGEIESRFLQSLVASG 1080

Query: 2401 EMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLK 2222
            EMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AK+IKTPSLSVYL+
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLR 1140

Query: 2221 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 2042
             +V KTKERAK+VQCALEYTTLRSVTQATEVWYDPDPMSTIIEED DFVKSYYEMPDEE+
Sbjct: 1141 SDVGKTKERAKSVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDADFVKSYYEMPDEEV 1200

Query: 2041 SPDKISPWLLRVELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1862
            + +KISPWLLR+ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 ALEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260

Query: 1861 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMP 1682
            NDEAPKGE+ DESAEDDVFLKKIESNMLTEM LRGIPDINKVFIKN K  +FD+++GF P
Sbjct: 1261 NDEAPKGEIQDESAEDDVFLKKIESNMLTEMTLRGIPDINKVFIKNTKVQKFDENQGFKP 1320

Query: 1681 EVEWMLDTEGVNLLAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDG 1502
              EWMLDTEGVNLLAV+CHEDVDATRTTSNHLIEV+EVLGIEAVR++LLDELRVVISFDG
Sbjct: 1321 NEEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFDG 1380

Query: 1501 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1322
            SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD+
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDY 1440

Query: 1321 LRGVTENIMLGQLAPIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIMGTP 1142
            LRGVTENIMLGQLAPIGTG+CALYLND+ML++AI+LQLPSYM+GLDFGMTP+RSPI GTP
Sbjct: 1441 LRGVTENIMLGQLAPIGTGECALYLNDEMLKNAIELQLPSYMDGLDFGMTPARSPISGTP 1500

Query: 1141 YRDGMMSPNYMLSPNLRLSPTNDAQFSPYVGGMAF 1037
            Y +G+MSP+Y+LSPNLRLSPT+DAQFSPYVGGMAF
Sbjct: 1501 YHEGLMSPSYLLSPNLRLSPTSDAQFSPYVGGMAF 1535


>ref|XP_007157862.1| hypothetical protein PHAVU_002G104500g [Phaseolus vulgaris]
            gi|561031277|gb|ESW29856.1| hypothetical protein
            PHAVU_002G104500g [Phaseolus vulgaris]
          Length = 1834

 Score = 2805 bits (7270), Expect = 0.0
 Identities = 1375/1535 (89%), Positives = 1465/1535 (95%)
 Frame = -2

Query: 5641 MDTRFPFSPAEVAKVRMVQFGIISPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 5462
            MD RFPFSPAEVAKVRMVQFGI+SPDEIRQMSVVQIEHGETTERGKPK+AGLSDPRLGTI
Sbjct: 1    MDIRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTI 60

Query: 5461 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHK 5282
            DRK+KCETCTA+MAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKILADE+DHK
Sbjct: 61   DRKLKCETCTASMAECPGHFGHLELAKPMFHIGFLKTVLTIMRCVCFNCSKILADENDHK 120

Query: 5281 FKLAQKVKNPKARLKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTI 5102
            FK A +++NPK RLK+ILDACKNK+KCEGGDEI+  G+D++EPVKK+RGGCGAQQPK+TI
Sbjct: 121  FKQALRIRNPKNRLKKILDACKNKSKCEGGDEIDIPGQDTDEPVKKSRGGCGAQQPKITI 180

Query: 5101 EGMKMIAEYKLQRKKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYAR 4922
            EGMK+IAEYK QRKKSDDQEQLPEPVERKQ LSAERVL VLKRISDEDC LLGLNPKYAR
Sbjct: 181  EGMKIIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 4921 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 4742
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNG+PAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIIS 300

Query: 4741 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4562
            EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 4561 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 4382
            TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 4381 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4202
            +DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 4201 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 4022
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 4021 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 3842
            LLGCRKITKRDTFI KDVFMN LMWWEDFDGKVP PTILKP PLWTGKQVFNLIIPK IN
Sbjct: 541  LLGCRKITKRDTFISKDVFMNTLMWWEDFDGKVPTPTILKPEPLWTGKQVFNLIIPKPIN 600

Query: 3841 LMRTSAWHSESETGFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3662
            L+R S+WHSESE G +TPGDT VRIE+GE++TGTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LIRYSSWHSESERGSITPGDTMVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660

Query: 3661 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQL 3482
            RKFLGHTQWLVNYWLLQ AFSIGIGDTIADASTME IN+TIS AK +VK+LIR AQEK+L
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMETINQTISAAKEKVKQLIRDAQEKKL 720

Query: 3481 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 3302
            EAEPGRTMMDSFENRVNQ LN+ARDDAG+SAQKSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EAEPGRTMMDSFENRVNQTLNRARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3301 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3122
            ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 3121 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQR 2942
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+Q+
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900

Query: 2941 LDSLKMKKGEFNKVYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQ 2762
            LDSLKMKK EF++V+ YEFDDENW P+Y+L E V+DL+ IREFRNVF+AE++KLE DR Q
Sbjct: 901  LDSLKMKKTEFDRVFRYEFDDENWKPTYMLEEPVEDLKTIREFRNVFEAEVQKLEADRYQ 960

Query: 2761 LGKDIVTTGDDVWPMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVH 2582
            L  +I TTGD   P+PVNLKRLIWNAQKTFK+D RRPS MHPMEIVEA+DKLQERL+VV 
Sbjct: 961  LATEIATTGDSSLPLPVNLKRLIWNAQKTFKVDFRRPSDMHPMEIVEAIDKLQERLRVVP 1020

Query: 2581 GDDPMSTEAQKNATLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASG 2402
            G+D +S EAQKNATL FNILLRST ASKRVL+EYRL++EAFEWVVGEIESRFLQSLVASG
Sbjct: 1021 GEDLLSQEAQKNATLLFNILLRSTFASKRVLEEYRLSREAFEWVVGEIESRFLQSLVASG 1080

Query: 2401 EMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLK 2222
            EMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AK+IKTPSLSVYL 
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLN 1140

Query: 2221 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 2042
            P+V KTKERAK+VQCALEYTTLRSVTQATEVWYDP+PMSTII+ED+DFVKSYYEMPDEE+
Sbjct: 1141 PDVGKTKERAKSVQCALEYTTLRSVTQATEVWYDPEPMSTIIDEDVDFVKSYYEMPDEEV 1200

Query: 2041 SPDKISPWLLRVELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1862
            + +KISPWLLR+ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 ALEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260

Query: 1861 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMP 1682
            NDEAPKGE+ DESAEDDVFLKKIESNMLTEM LRGIPDINKVFIKN K  +FD+ EGF P
Sbjct: 1261 NDEAPKGEIQDESAEDDVFLKKIESNMLTEMTLRGIPDINKVFIKNTKVQKFDESEGFKP 1320

Query: 1681 EVEWMLDTEGVNLLAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDG 1502
              EWMLDTEGVNLLAV+CHEDVDATRTTSNHLIEV+EVLGIEAVR++LLDELRVVISFDG
Sbjct: 1321 NEEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFDG 1380

Query: 1501 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1322
            SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1440

Query: 1321 LRGVTENIMLGQLAPIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIMGTP 1142
            LRGVTENIMLGQLAPIGTG+CALYLND+ML++AI+LQLPSYM+GLDFGMTP+RSPI GTP
Sbjct: 1441 LRGVTENIMLGQLAPIGTGECALYLNDEMLKNAIELQLPSYMDGLDFGMTPARSPISGTP 1500

Query: 1141 YRDGMMSPNYMLSPNLRLSPTNDAQFSPYVGGMAF 1037
            Y +G+MSP+Y+LSPNLRLSPT+DAQFSPYVGGMAF
Sbjct: 1501 YHEGLMSPSYLLSPNLRLSPTSDAQFSPYVGGMAF 1535


>ref|XP_006425357.1| hypothetical protein CICLE_v10024686mg [Citrus clementina]
            gi|557527347|gb|ESR38597.1| hypothetical protein
            CICLE_v10024686mg [Citrus clementina]
          Length = 1860

 Score = 2800 bits (7257), Expect = 0.0
 Identities = 1369/1535 (89%), Positives = 1457/1535 (94%)
 Frame = -2

Query: 5641 MDTRFPFSPAEVAKVRMVQFGIISPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 5462
            MDTRFP+SPAEVAKVRMVQFGI+SPDEIRQMSVVQIEHGETTERGKPK  GLSDPRLGTI
Sbjct: 1    MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKPGGLSDPRLGTI 60

Query: 5461 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHK 5282
            DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMR VCFNCSKILADEDDHK
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHK 120

Query: 5281 FKLAQKVKNPKARLKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTI 5102
            FK A K++NPK RLK+ILDACKNKTKCEGGDEI+  G+D EEP+KK +GGCGAQQPKLTI
Sbjct: 121  FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKKKGGCGAQQPKLTI 180

Query: 5101 EGMKMIAEYKLQRKKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYAR 4922
            EGMKMIAEYK QRKK+DDQEQLPEPVERKQ L+AERVL VLKRISDEDC LLGLNPKYAR
Sbjct: 181  EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 4921 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 4742
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300

Query: 4741 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4562
            EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 4561 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 4382
            TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 4381 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4202
            +DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 4201 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 4022
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 4021 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 3842
            LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVP PTILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPQPTILKPRPLWTGKQVFNLIIPKQIN 600

Query: 3841 LMRTSAWHSESETGFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3662
            L RT+AWH++++ G LT GDT VRIE+GE+++GTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LFRTAAWHADNDKGILTAGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660

Query: 3661 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQL 3482
            RKFLGHTQWLVNYWLLQ AFSIGIGDTIADA TME IN+TISKAKN VK LI+ AQ+K L
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAKTMETINDTISKAKNNVKNLIKQAQDKSL 720

Query: 3481 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 3302
            E EPGRTMM+SFEN+VNQVLN ARD+AGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EPEPGRTMMESFENKVNQVLNTARDEAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3301 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3122
            ACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 3121 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQR 2942
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ 
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQT 900

Query: 2941 LDSLKMKKGEFNKVYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQ 2762
            LDSLKMKK EF+K + +E D+ENWNP+Y+L E++DDL+ I+E R+VFDAE++KLE DR Q
Sbjct: 901  LDSLKMKKSEFDKAFRFEMDEENWNPNYMLQEYIDDLKTIKELRDVFDAEVQKLEADRYQ 960

Query: 2761 LGKDIVTTGDDVWPMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVH 2582
            L  +I T+GD  WP+PVNLKRLIWNAQKTFK+D RRPS MHPME+VEAVDKLQERLKVV 
Sbjct: 961  LATEIATSGDSSWPLPVNLKRLIWNAQKTFKVDPRRPSDMHPMEVVEAVDKLQERLKVVP 1020

Query: 2581 GDDPMSTEAQKNATLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASG 2402
            G+DP+S EAQKNATLFFNILLRST ASKRVLKE+RLT+EAFEWV+GEIESRFLQSLVA G
Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLKEHRLTREAFEWVIGEIESRFLQSLVAPG 1080

Query: 2401 EMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLK 2222
            EMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AKKIKTPSLSV+LK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLK 1140

Query: 2221 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 2042
            P VN TKERAKNVQCALEYTTLRSVT+ATEVWYDPDPM TIIEED++FVKSYYEMPDE+I
Sbjct: 1141 PGVNSTKERAKNVQCALEYTTLRSVTEATEVWYDPDPMGTIIEEDVEFVKSYYEMPDEDI 1200

Query: 2041 SPDKISPWLLRVELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1862
            +P+KISPWLLR+ELNREMMVDKKLSMA +AEKIN EFDDDLTCIFNDDNA+KLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMAAVAEKINQEFDDDLTCIFNDDNADKLILRIRIM 1260

Query: 1861 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMP 1682
            NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK  K  ++DD+EGF  
Sbjct: 1261 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKKGKTTKYDDNEGFKS 1320

Query: 1681 EVEWMLDTEGVNLLAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDG 1502
            E EWMLDTEGVNLLAV+CHEDVDA RTTSNHLIE++EVLGIEAVR++LLDELRVVISFDG
Sbjct: 1321 EDEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEIIEVLGIEAVRRALLDELRVVISFDG 1380

Query: 1501 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1322
            SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE+D+
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDY 1440

Query: 1321 LRGVTENIMLGQLAPIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIMGTP 1142
            LRGVTENIMLGQLAPIGTGDC+LYLND+ML++AI+LQLPSYMEGL+FGMTP+RSP+ GTP
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCSLYLNDEMLKNAIELQLPSYMEGLEFGMTPARSPVSGTP 1500

Query: 1141 YRDGMMSPNYMLSPNLRLSPTNDAQFSPYVGGMAF 1037
            Y DGMMSP Y+ SPNLRLSP  DAQFSPYVGGMAF
Sbjct: 1501 YHDGMMSPGYLFSPNLRLSPVTDAQFSPYVGGMAF 1535


>ref|XP_006467031.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X5
            [Citrus sinensis]
          Length = 1963

 Score = 2799 bits (7256), Expect = 0.0
 Identities = 1369/1535 (89%), Positives = 1457/1535 (94%)
 Frame = -2

Query: 5641 MDTRFPFSPAEVAKVRMVQFGIISPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 5462
            MDTRFP+SPAEVAKVRMVQFGI+SPDEIRQMSVVQIEHGETTERGKPK  GLSDPRLGTI
Sbjct: 1    MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKPGGLSDPRLGTI 60

Query: 5461 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHK 5282
            DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMR VCFNCSKILADEDDHK
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHK 120

Query: 5281 FKLAQKVKNPKARLKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTI 5102
            FK A K++NPK RLK+ILDACKNKTKCEGGDEI+  G+D EEP+KK +GGCGAQQPKLTI
Sbjct: 121  FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKNKGGCGAQQPKLTI 180

Query: 5101 EGMKMIAEYKLQRKKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYAR 4922
            EGMKMIAEYK QRKK+DDQEQLPEPVERKQ L+AERVL VLKRISDEDC LLGLNPKYAR
Sbjct: 181  EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 4921 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 4742
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300

Query: 4741 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4562
            EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 4561 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 4382
            TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 4381 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4202
            +DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 4201 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 4022
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 4021 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 3842
            LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVP PTILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPQPTILKPRPLWTGKQVFNLIIPKQIN 600

Query: 3841 LMRTSAWHSESETGFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3662
            L RT+AWH++++ G LT GDT VRIE+GE+++GTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LFRTAAWHADNDKGILTAGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660

Query: 3661 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQL 3482
            RKFLGHTQWLVNYWLLQ AFSIGIGDTIADA TME IN+TISKAKN VK LI+ AQ+K L
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAKTMETINDTISKAKNNVKNLIKQAQDKSL 720

Query: 3481 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 3302
            E EPGRTMM+SFEN+VNQVLN ARD+AGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EPEPGRTMMESFENKVNQVLNTARDEAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3301 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3122
            ACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 3121 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQR 2942
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ 
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQT 900

Query: 2941 LDSLKMKKGEFNKVYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQ 2762
            LDSLKMKK EF+K + +E D+ENWNP+Y+L E++DDL+ I+E R+VFDAE++KLE DR Q
Sbjct: 901  LDSLKMKKSEFDKAFRFEMDEENWNPNYMLQEYIDDLKTIKELRDVFDAEVQKLEADRYQ 960

Query: 2761 LGKDIVTTGDDVWPMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVH 2582
            L  +I T+GD  WP+PVNLKRLIWNAQKTFK+D RRPS MHPME+VEAVDKLQERLKVV 
Sbjct: 961  LATEIATSGDSSWPLPVNLKRLIWNAQKTFKVDPRRPSDMHPMEVVEAVDKLQERLKVVP 1020

Query: 2581 GDDPMSTEAQKNATLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASG 2402
            G+DP+S EAQKNATLFFNILLRST ASKRVLKE+RLT+EAFEWV+GEIESRFLQSLVA G
Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLKEHRLTREAFEWVIGEIESRFLQSLVAPG 1080

Query: 2401 EMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLK 2222
            EMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AKKIKTPSLSV+LK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLK 1140

Query: 2221 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 2042
            P VN TKERAKNVQCALEYTTLRSVT+ATEVWYDPDPM TIIEED++FVKSYYEMPDE+I
Sbjct: 1141 PGVNSTKERAKNVQCALEYTTLRSVTEATEVWYDPDPMGTIIEEDVEFVKSYYEMPDEDI 1200

Query: 2041 SPDKISPWLLRVELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1862
            +P+KISPWLLR+ELNREMMVDKKLSMA +AEKIN EFDDDLTCIFNDDNA+KLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMAAVAEKINQEFDDDLTCIFNDDNADKLILRIRIM 1260

Query: 1861 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMP 1682
            NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK  K  ++DD+EGF  
Sbjct: 1261 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKKGKTTKYDDNEGFKS 1320

Query: 1681 EVEWMLDTEGVNLLAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDG 1502
            E EWMLDTEGVNLLAV+CHEDVDA RTTSNHLIE++EVLGIEAVR++LLDELRVVISFDG
Sbjct: 1321 EDEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEIIEVLGIEAVRRALLDELRVVISFDG 1380

Query: 1501 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1322
            SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE+D+
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDY 1440

Query: 1321 LRGVTENIMLGQLAPIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIMGTP 1142
            LRGVTENIMLGQLAPIGTGDC+LYLND+ML++AI+LQLPSYMEGL+FGMTP+RSP+ GTP
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCSLYLNDEMLKNAIELQLPSYMEGLEFGMTPARSPVSGTP 1500

Query: 1141 YRDGMMSPNYMLSPNLRLSPTNDAQFSPYVGGMAF 1037
            Y DGMMSP Y+ SPNLRLSP  DAQFSPYVGGMAF
Sbjct: 1501 YHDGMMSPGYLFSPNLRLSPVTDAQFSPYVGGMAF 1535


>ref|XP_006467030.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X4
            [Citrus sinensis]
          Length = 1853

 Score = 2799 bits (7256), Expect = 0.0
 Identities = 1369/1535 (89%), Positives = 1457/1535 (94%)
 Frame = -2

Query: 5641 MDTRFPFSPAEVAKVRMVQFGIISPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 5462
            MDTRFP+SPAEVAKVRMVQFGI+SPDEIRQMSVVQIEHGETTERGKPK  GLSDPRLGTI
Sbjct: 1    MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKPGGLSDPRLGTI 60

Query: 5461 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHK 5282
            DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMR VCFNCSKILADEDDHK
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHK 120

Query: 5281 FKLAQKVKNPKARLKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTI 5102
            FK A K++NPK RLK+ILDACKNKTKCEGGDEI+  G+D EEP+KK +GGCGAQQPKLTI
Sbjct: 121  FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKNKGGCGAQQPKLTI 180

Query: 5101 EGMKMIAEYKLQRKKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYAR 4922
            EGMKMIAEYK QRKK+DDQEQLPEPVERKQ L+AERVL VLKRISDEDC LLGLNPKYAR
Sbjct: 181  EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 4921 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 4742
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300

Query: 4741 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4562
            EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 4561 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 4382
            TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 4381 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4202
            +DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 4201 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 4022
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 4021 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 3842
            LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVP PTILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPQPTILKPRPLWTGKQVFNLIIPKQIN 600

Query: 3841 LMRTSAWHSESETGFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3662
            L RT+AWH++++ G LT GDT VRIE+GE+++GTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LFRTAAWHADNDKGILTAGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660

Query: 3661 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQL 3482
            RKFLGHTQWLVNYWLLQ AFSIGIGDTIADA TME IN+TISKAKN VK LI+ AQ+K L
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAKTMETINDTISKAKNNVKNLIKQAQDKSL 720

Query: 3481 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 3302
            E EPGRTMM+SFEN+VNQVLN ARD+AGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EPEPGRTMMESFENKVNQVLNTARDEAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3301 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3122
            ACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 3121 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQR 2942
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ 
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQT 900

Query: 2941 LDSLKMKKGEFNKVYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQ 2762
            LDSLKMKK EF+K + +E D+ENWNP+Y+L E++DDL+ I+E R+VFDAE++KLE DR Q
Sbjct: 901  LDSLKMKKSEFDKAFRFEMDEENWNPNYMLQEYIDDLKTIKELRDVFDAEVQKLEADRYQ 960

Query: 2761 LGKDIVTTGDDVWPMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVH 2582
            L  +I T+GD  WP+PVNLKRLIWNAQKTFK+D RRPS MHPME+VEAVDKLQERLKVV 
Sbjct: 961  LATEIATSGDSSWPLPVNLKRLIWNAQKTFKVDPRRPSDMHPMEVVEAVDKLQERLKVVP 1020

Query: 2581 GDDPMSTEAQKNATLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASG 2402
            G+DP+S EAQKNATLFFNILLRST ASKRVLKE+RLT+EAFEWV+GEIESRFLQSLVA G
Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLKEHRLTREAFEWVIGEIESRFLQSLVAPG 1080

Query: 2401 EMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLK 2222
            EMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AKKIKTPSLSV+LK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLK 1140

Query: 2221 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 2042
            P VN TKERAKNVQCALEYTTLRSVT+ATEVWYDPDPM TIIEED++FVKSYYEMPDE+I
Sbjct: 1141 PGVNSTKERAKNVQCALEYTTLRSVTEATEVWYDPDPMGTIIEEDVEFVKSYYEMPDEDI 1200

Query: 2041 SPDKISPWLLRVELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1862
            +P+KISPWLLR+ELNREMMVDKKLSMA +AEKIN EFDDDLTCIFNDDNA+KLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMAAVAEKINQEFDDDLTCIFNDDNADKLILRIRIM 1260

Query: 1861 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMP 1682
            NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK  K  ++DD+EGF  
Sbjct: 1261 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKKGKTTKYDDNEGFKS 1320

Query: 1681 EVEWMLDTEGVNLLAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDG 1502
            E EWMLDTEGVNLLAV+CHEDVDA RTTSNHLIE++EVLGIEAVR++LLDELRVVISFDG
Sbjct: 1321 EDEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEIIEVLGIEAVRRALLDELRVVISFDG 1380

Query: 1501 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1322
            SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE+D+
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDY 1440

Query: 1321 LRGVTENIMLGQLAPIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIMGTP 1142
            LRGVTENIMLGQLAPIGTGDC+LYLND+ML++AI+LQLPSYMEGL+FGMTP+RSP+ GTP
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCSLYLNDEMLKNAIELQLPSYMEGLEFGMTPARSPVSGTP 1500

Query: 1141 YRDGMMSPNYMLSPNLRLSPTNDAQFSPYVGGMAF 1037
            Y DGMMSP Y+ SPNLRLSP  DAQFSPYVGGMAF
Sbjct: 1501 YHDGMMSPGYLFSPNLRLSPVTDAQFSPYVGGMAF 1535


>ref|XP_006467029.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X3
            [Citrus sinensis]
          Length = 1790

 Score = 2799 bits (7256), Expect = 0.0
 Identities = 1369/1535 (89%), Positives = 1457/1535 (94%)
 Frame = -2

Query: 5641 MDTRFPFSPAEVAKVRMVQFGIISPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 5462
            MDTRFP+SPAEVAKVRMVQFGI+SPDEIRQMSVVQIEHGETTERGKPK  GLSDPRLGTI
Sbjct: 1    MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKPGGLSDPRLGTI 60

Query: 5461 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHK 5282
            DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMR VCFNCSKILADEDDHK
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHK 120

Query: 5281 FKLAQKVKNPKARLKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTI 5102
            FK A K++NPK RLK+ILDACKNKTKCEGGDEI+  G+D EEP+KK +GGCGAQQPKLTI
Sbjct: 121  FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKNKGGCGAQQPKLTI 180

Query: 5101 EGMKMIAEYKLQRKKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYAR 4922
            EGMKMIAEYK QRKK+DDQEQLPEPVERKQ L+AERVL VLKRISDEDC LLGLNPKYAR
Sbjct: 181  EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 4921 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 4742
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300

Query: 4741 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4562
            EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 4561 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 4382
            TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 4381 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4202
            +DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 4201 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 4022
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 4021 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 3842
            LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVP PTILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPQPTILKPRPLWTGKQVFNLIIPKQIN 600

Query: 3841 LMRTSAWHSESETGFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3662
            L RT+AWH++++ G LT GDT VRIE+GE+++GTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LFRTAAWHADNDKGILTAGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660

Query: 3661 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQL 3482
            RKFLGHTQWLVNYWLLQ AFSIGIGDTIADA TME IN+TISKAKN VK LI+ AQ+K L
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAKTMETINDTISKAKNNVKNLIKQAQDKSL 720

Query: 3481 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 3302
            E EPGRTMM+SFEN+VNQVLN ARD+AGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EPEPGRTMMESFENKVNQVLNTARDEAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3301 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3122
            ACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 3121 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQR 2942
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ 
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQT 900

Query: 2941 LDSLKMKKGEFNKVYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQ 2762
            LDSLKMKK EF+K + +E D+ENWNP+Y+L E++DDL+ I+E R+VFDAE++KLE DR Q
Sbjct: 901  LDSLKMKKSEFDKAFRFEMDEENWNPNYMLQEYIDDLKTIKELRDVFDAEVQKLEADRYQ 960

Query: 2761 LGKDIVTTGDDVWPMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVH 2582
            L  +I T+GD  WP+PVNLKRLIWNAQKTFK+D RRPS MHPME+VEAVDKLQERLKVV 
Sbjct: 961  LATEIATSGDSSWPLPVNLKRLIWNAQKTFKVDPRRPSDMHPMEVVEAVDKLQERLKVVP 1020

Query: 2581 GDDPMSTEAQKNATLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASG 2402
            G+DP+S EAQKNATLFFNILLRST ASKRVLKE+RLT+EAFEWV+GEIESRFLQSLVA G
Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLKEHRLTREAFEWVIGEIESRFLQSLVAPG 1080

Query: 2401 EMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLK 2222
            EMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AKKIKTPSLSV+LK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLK 1140

Query: 2221 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 2042
            P VN TKERAKNVQCALEYTTLRSVT+ATEVWYDPDPM TIIEED++FVKSYYEMPDE+I
Sbjct: 1141 PGVNSTKERAKNVQCALEYTTLRSVTEATEVWYDPDPMGTIIEEDVEFVKSYYEMPDEDI 1200

Query: 2041 SPDKISPWLLRVELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1862
            +P+KISPWLLR+ELNREMMVDKKLSMA +AEKIN EFDDDLTCIFNDDNA+KLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMAAVAEKINQEFDDDLTCIFNDDNADKLILRIRIM 1260

Query: 1861 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMP 1682
            NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK  K  ++DD+EGF  
Sbjct: 1261 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKKGKTTKYDDNEGFKS 1320

Query: 1681 EVEWMLDTEGVNLLAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDG 1502
            E EWMLDTEGVNLLAV+CHEDVDA RTTSNHLIE++EVLGIEAVR++LLDELRVVISFDG
Sbjct: 1321 EDEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEIIEVLGIEAVRRALLDELRVVISFDG 1380

Query: 1501 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1322
            SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE+D+
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDY 1440

Query: 1321 LRGVTENIMLGQLAPIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIMGTP 1142
            LRGVTENIMLGQLAPIGTGDC+LYLND+ML++AI+LQLPSYMEGL+FGMTP+RSP+ GTP
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCSLYLNDEMLKNAIELQLPSYMEGLEFGMTPARSPVSGTP 1500

Query: 1141 YRDGMMSPNYMLSPNLRLSPTNDAQFSPYVGGMAF 1037
            Y DGMMSP Y+ SPNLRLSP  DAQFSPYVGGMAF
Sbjct: 1501 YHDGMMSPGYLFSPNLRLSPVTDAQFSPYVGGMAF 1535


>ref|XP_006467027.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X1
            [Citrus sinensis] gi|568825318|ref|XP_006467028.1|
            PREDICTED: DNA-directed RNA polymerase II subunit 1-like
            isoform X2 [Citrus sinensis]
          Length = 1860

 Score = 2799 bits (7256), Expect = 0.0
 Identities = 1369/1535 (89%), Positives = 1457/1535 (94%)
 Frame = -2

Query: 5641 MDTRFPFSPAEVAKVRMVQFGIISPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 5462
            MDTRFP+SPAEVAKVRMVQFGI+SPDEIRQMSVVQIEHGETTERGKPK  GLSDPRLGTI
Sbjct: 1    MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKPGGLSDPRLGTI 60

Query: 5461 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHK 5282
            DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMR VCFNCSKILADEDDHK
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHK 120

Query: 5281 FKLAQKVKNPKARLKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTI 5102
            FK A K++NPK RLK+ILDACKNKTKCEGGDEI+  G+D EEP+KK +GGCGAQQPKLTI
Sbjct: 121  FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKNKGGCGAQQPKLTI 180

Query: 5101 EGMKMIAEYKLQRKKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYAR 4922
            EGMKMIAEYK QRKK+DDQEQLPEPVERKQ L+AERVL VLKRISDEDC LLGLNPKYAR
Sbjct: 181  EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 4921 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 4742
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300

Query: 4741 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4562
            EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 4561 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 4382
            TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 4381 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4202
            +DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 4201 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 4022
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 4021 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 3842
            LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVP PTILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPQPTILKPRPLWTGKQVFNLIIPKQIN 600

Query: 3841 LMRTSAWHSESETGFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3662
            L RT+AWH++++ G LT GDT VRIE+GE+++GTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LFRTAAWHADNDKGILTAGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660

Query: 3661 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQL 3482
            RKFLGHTQWLVNYWLLQ AFSIGIGDTIADA TME IN+TISKAKN VK LI+ AQ+K L
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAKTMETINDTISKAKNNVKNLIKQAQDKSL 720

Query: 3481 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 3302
            E EPGRTMM+SFEN+VNQVLN ARD+AGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EPEPGRTMMESFENKVNQVLNTARDEAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3301 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3122
            ACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 3121 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQR 2942
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ 
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQT 900

Query: 2941 LDSLKMKKGEFNKVYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQ 2762
            LDSLKMKK EF+K + +E D+ENWNP+Y+L E++DDL+ I+E R+VFDAE++KLE DR Q
Sbjct: 901  LDSLKMKKSEFDKAFRFEMDEENWNPNYMLQEYIDDLKTIKELRDVFDAEVQKLEADRYQ 960

Query: 2761 LGKDIVTTGDDVWPMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVH 2582
            L  +I T+GD  WP+PVNLKRLIWNAQKTFK+D RRPS MHPME+VEAVDKLQERLKVV 
Sbjct: 961  LATEIATSGDSSWPLPVNLKRLIWNAQKTFKVDPRRPSDMHPMEVVEAVDKLQERLKVVP 1020

Query: 2581 GDDPMSTEAQKNATLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASG 2402
            G+DP+S EAQKNATLFFNILLRST ASKRVLKE+RLT+EAFEWV+GEIESRFLQSLVA G
Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLKEHRLTREAFEWVIGEIESRFLQSLVAPG 1080

Query: 2401 EMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLK 2222
            EMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AKKIKTPSLSV+LK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLK 1140

Query: 2221 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 2042
            P VN TKERAKNVQCALEYTTLRSVT+ATEVWYDPDPM TIIEED++FVKSYYEMPDE+I
Sbjct: 1141 PGVNSTKERAKNVQCALEYTTLRSVTEATEVWYDPDPMGTIIEEDVEFVKSYYEMPDEDI 1200

Query: 2041 SPDKISPWLLRVELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1862
            +P+KISPWLLR+ELNREMMVDKKLSMA +AEKIN EFDDDLTCIFNDDNA+KLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMAAVAEKINQEFDDDLTCIFNDDNADKLILRIRIM 1260

Query: 1861 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMP 1682
            NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK  K  ++DD+EGF  
Sbjct: 1261 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKKGKTTKYDDNEGFKS 1320

Query: 1681 EVEWMLDTEGVNLLAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDG 1502
            E EWMLDTEGVNLLAV+CHEDVDA RTTSNHLIE++EVLGIEAVR++LLDELRVVISFDG
Sbjct: 1321 EDEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEIIEVLGIEAVRRALLDELRVVISFDG 1380

Query: 1501 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1322
            SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE+D+
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDY 1440

Query: 1321 LRGVTENIMLGQLAPIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIMGTP 1142
            LRGVTENIMLGQLAPIGTGDC+LYLND+ML++AI+LQLPSYMEGL+FGMTP+RSP+ GTP
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCSLYLNDEMLKNAIELQLPSYMEGLEFGMTPARSPVSGTP 1500

Query: 1141 YRDGMMSPNYMLSPNLRLSPTNDAQFSPYVGGMAF 1037
            Y DGMMSP Y+ SPNLRLSP  DAQFSPYVGGMAF
Sbjct: 1501 YHDGMMSPGYLFSPNLRLSPVTDAQFSPYVGGMAF 1535


>ref|XP_007046584.1| DNA-directed RNA polymerase II subunit RPB1 isoform 1 [Theobroma
            cacao] gi|590702281|ref|XP_007046585.1| DNA-directed RNA
            polymerase II subunit RPB1 isoform 1 [Theobroma cacao]
            gi|590702285|ref|XP_007046586.1| DNA-directed RNA
            polymerase II subunit RPB1 isoform 1 [Theobroma cacao]
            gi|508698845|gb|EOX90741.1| DNA-directed RNA polymerase
            II subunit RPB1 isoform 1 [Theobroma cacao]
            gi|508698846|gb|EOX90742.1| DNA-directed RNA polymerase
            II subunit RPB1 isoform 1 [Theobroma cacao]
            gi|508698847|gb|EOX90743.1| DNA-directed RNA polymerase
            II subunit RPB1 isoform 1 [Theobroma cacao]
          Length = 1861

 Score = 2799 bits (7256), Expect = 0.0
 Identities = 1372/1536 (89%), Positives = 1465/1536 (95%), Gaps = 1/1536 (0%)
 Frame = -2

Query: 5641 MDTRFPFSPAEVAKVRMVQFGIISPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 5462
            MD RFP+SPAEVAKVRMVQFGI+SPDEIRQMSVVQIEHGETTERGKPK+ GLSDPRLGTI
Sbjct: 1    MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60

Query: 5461 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHK 5282
            DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADE++HK
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEEHK 120

Query: 5281 FKLAQKVKNPKARLKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTI 5102
            FK A K+KNPK RLK+ILDACKNK+KCEGGDEI+ QG+D+EEPVKK+RGGCGAQQPKL+I
Sbjct: 121  FKQALKIKNPKNRLKKILDACKNKSKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKLSI 180

Query: 5101 EGMKMIAEYKLQRKKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYAR 4922
            +GMKMIAEYK QRK++DDQEQLPEPVERKQ L+AERVLSVLKRISDEDC LLGLNPK+AR
Sbjct: 181  DGMKMIAEYKPQRKRNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKFAR 240

Query: 4921 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 4742
            PDWMILQVL        PSVMMDTSSRSEDDLTH LAMIIRHNENLRRQERNG+PAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHALAMIIRHNENLRRQERNGSPAHIIS 300

Query: 4741 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4562
            EFAQLLQFHVATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHVATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 4561 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 4382
            TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 4381 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4202
            +DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRI+IMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYST 480

Query: 4201 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 4022
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 4021 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 3842
            LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600

Query: 3841 LMRTSAWHSESETGFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3662
            L+R SAWHSE+ETGF+TPGDTQVRIE+GE+++GTLCKK LGTS+GSLIHVIWEEVGPDAA
Sbjct: 601  LLRNSAWHSETETGFITPGDTQVRIEKGELLSGTLCKKALGTSSGSLIHVIWEEVGPDAA 660

Query: 3661 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQL 3482
            RKFLGHTQWLVNYWLLQ AFSIGIGDTIADA+TMEKINETISKAK EVK LI  AQ K L
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKEEVKNLIVKAQNKDL 720

Query: 3481 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 3302
            E EPGRTMM+SFEN+VNQVLNKARDDAG+SAQKSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EPEPGRTMMESFENKVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3301 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3122
            ACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 3121 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQR 2942
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ+
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 900

Query: 2941 LDSLKMKKGEFNKVYGYEFDDENWNP-SYLLPEHVDDLQNIREFRNVFDAELKKLEEDRL 2765
            LDSLKMKK EF++V+ Y  DDE+WNP SY+LPEH++DL+ I+E R+VF+AE++KL+ DR 
Sbjct: 901  LDSLKMKKSEFDRVFRYNIDDESWNPTSYMLPEHIEDLRTIQELRDVFEAEVQKLDADRY 960

Query: 2764 QLGKDIVTTGDDVWPMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVV 2585
            QLG +I  TGD  WP+PVNLKRLIWNAQKTFK+D RR S +HP+EIV++VDKLQERLKVV
Sbjct: 961  QLGTEIAVTGDSNWPLPVNLKRLIWNAQKTFKVDFRRVSDLHPVEIVDSVDKLQERLKVV 1020

Query: 2584 HGDDPMSTEAQKNATLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVAS 2405
             G DP+S EAQKNATLFF+ILLRSTLASKRVL+EYRLTKEAFEWV+GEIESRFLQSLVA 
Sbjct: 1021 PGTDPLSVEAQKNATLFFSILLRSTLASKRVLQEYRLTKEAFEWVIGEIESRFLQSLVAP 1080

Query: 2404 GEMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYL 2225
            GEMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AKKIKTPSLSVYL
Sbjct: 1081 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140

Query: 2224 KPEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEE 2045
             PE +KTKE+AKNVQCALEYTTLRSVT ATEVWYDPDP STIIEEDIDFVKSYYEMPDEE
Sbjct: 1141 SPEASKTKEKAKNVQCALEYTTLRSVTHATEVWYDPDPTSTIIEEDIDFVKSYYEMPDEE 1200

Query: 2044 ISPDKISPWLLRVELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 1865
            ++P+KISPWLLR+ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI
Sbjct: 1201 VAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 1260

Query: 1864 MNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFM 1685
            MNDE PKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K  +FD+ +G+ 
Sbjct: 1261 MNDEGPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHSKASKFDEADGYK 1320

Query: 1684 PEVEWMLDTEGVNLLAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFD 1505
               EW+LDTEGVNLLAV+CHEDVDA RTTSNHLIEV+EVLGIEAVR+SLLDELRVVISFD
Sbjct: 1321 TGEEWVLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1380

Query: 1504 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD 1325
            GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE+D
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESD 1440

Query: 1324 HLRGVTENIMLGQLAPIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIMGT 1145
            +LRGVTENIMLGQLAPIGTGDCALYLND+ML++AI+LQLPSYMEGL+FGMTP+RSP+ GT
Sbjct: 1441 YLRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYMEGLEFGMTPARSPVSGT 1500

Query: 1144 PYRDGMMSPNYMLSPNLRLSPTNDAQFSPYVGGMAF 1037
            PY +GMMSP+Y+LSPNLRLSP  DAQFSPYVGGMAF
Sbjct: 1501 PYHEGMMSPSYLLSPNLRLSPITDAQFSPYVGGMAF 1536


>ref|XP_004512182.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Cicer
            arietinum]
          Length = 1834

 Score = 2795 bits (7245), Expect = 0.0
 Identities = 1373/1535 (89%), Positives = 1461/1535 (95%)
 Frame = -2

Query: 5641 MDTRFPFSPAEVAKVRMVQFGIISPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 5462
            MD RFPFSPAEVAKVRMVQFGI+SPDEIRQMSVVQIEHGETTERGKPKI GLSDPRLGTI
Sbjct: 1    MDIRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKIGGLSDPRLGTI 60

Query: 5461 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHK 5282
            DRKMKCETCTA+MAECPGHFG+LELAKPMFHIGF+KTVLSIMRCVCFNCSKILADE DHK
Sbjct: 61   DRKMKCETCTASMAECPGHFGYLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEQDHK 120

Query: 5281 FKLAQKVKNPKARLKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTI 5102
            FK A ++K+PK RL++ILDACKNKTKCEGGD+I+  G D+EEPVKK+RGGCGAQQPK+TI
Sbjct: 121  FKQALRIKSPKNRLRKILDACKNKTKCEGGDDIDMPGHDTEEPVKKSRGGCGAQQPKITI 180

Query: 5101 EGMKMIAEYKLQRKKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYAR 4922
            EGMKMIAEYK QRKKSDDQEQLPEPVERKQ LSAERVL VLKRISDEDC LLGLNPKYAR
Sbjct: 181  EGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 4921 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 4742
            PDW+ILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNG+PAHIIS
Sbjct: 241  PDWLILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIIS 300

Query: 4741 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4562
            EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 4561 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 4382
            TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 4381 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4202
            +DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 4201 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 4022
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQD+
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDS 540

Query: 4021 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 3842
            LLGCRKITKRDTFI KDVFMNILMWWEDFDGKVP PTILKP P+WTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFISKDVFMNILMWWEDFDGKVPTPTILKPEPMWTGKQVFNLIIPKQIN 600

Query: 3841 LMRTSAWHSESETGFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3662
            L+R S+WH+E+E G +TPGDT VRIE+GE++TGTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LIRYSSWHNENEKGPITPGDTMVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660

Query: 3661 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQL 3482
            RKFLGHTQWLVNYWLLQ AFSIGIGDTIADASTME IN+TIS+AK +VK+LIR AQEK+L
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMETINQTISQAKEKVKQLIREAQEKKL 720

Query: 3481 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 3302
            EAEPGRTMM+SFENRVNQ LN+ARDDAG+SAQKSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EAEPGRTMMESFENRVNQTLNRARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3301 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3122
            ACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 3121 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQR 2942
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+Q+
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900

Query: 2941 LDSLKMKKGEFNKVYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQ 2762
            LDSLKMKK +F++ + YEFDDENW P+Y+L E V+DL+ IREFRNVF+AE++KL+ DR Q
Sbjct: 901  LDSLKMKKADFDRAFRYEFDDENWKPTYMLEEPVEDLKTIREFRNVFEAEVQKLDADRFQ 960

Query: 2761 LGKDIVTTGDDVWPMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVH 2582
            L  +I TTGD   P+PVNLKRLIWNAQKTFK+D RRPS MHPMEIVEA+DKLQERLKVV 
Sbjct: 961  LATEIATTGDSSLPLPVNLKRLIWNAQKTFKVDFRRPSDMHPMEIVEAIDKLQERLKVVP 1020

Query: 2581 GDDPMSTEAQKNATLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASG 2402
            GDD +S EAQKNATL FNILLRST ASKRVL+EYRL++EAFEWVVGEIESRFLQSLVASG
Sbjct: 1021 GDDLLSQEAQKNATLLFNILLRSTFASKRVLEEYRLSREAFEWVVGEIESRFLQSLVASG 1080

Query: 2401 EMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLK 2222
            EMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AK+IKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140

Query: 2221 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 2042
            PEV KTKERAK+VQCALEYTTLRSVTQATEVWYDPDPMSTIIEED+DFVKSYYEMPDEE+
Sbjct: 1141 PEVCKTKERAKSVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEV 1200

Query: 2041 SPDKISPWLLRVELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1862
            + +KISPWLLR+ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 ALEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260

Query: 1861 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMP 1682
            NDEAPKGE+ DESAEDDVFLKKIESNMLTEM LRGI DINKVFIKN K  +FD++EGF P
Sbjct: 1261 NDEAPKGEIQDESAEDDVFLKKIESNMLTEMTLRGIADINKVFIKNTKIQKFDENEGFKP 1320

Query: 1681 EVEWMLDTEGVNLLAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDG 1502
              EWMLDTEGVNLLAV+CHEDVDA RTTSNHLIEV+EVLGIEAVR+SLLDELRVVISFDG
Sbjct: 1321 YEEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380

Query: 1501 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1322
            SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD+
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDY 1440

Query: 1321 LRGVTENIMLGQLAPIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIMGTP 1142
            LRGVTENIMLGQLAPIGTG+CAL LND+ML++AI+LQLPSYMEGLDFGMTP RSPI  TP
Sbjct: 1441 LRGVTENIMLGQLAPIGTGECALLLNDEMLKNAIELQLPSYMEGLDFGMTPGRSPISATP 1500

Query: 1141 YRDGMMSPNYMLSPNLRLSPTNDAQFSPYVGGMAF 1037
            Y +G+MSP+Y+LSPNLRLSPTNDAQFSPYVGGMAF
Sbjct: 1501 YHEGLMSPSYLLSPNLRLSPTNDAQFSPYVGGMAF 1535


>ref|XP_002530639.1| DNA-directed RNA polymerase II largest subunit, putative [Ricinus
            communis] gi|223529812|gb|EEF31747.1| DNA-directed RNA
            polymerase II largest subunit, putative [Ricinus
            communis]
          Length = 1855

 Score = 2793 bits (7240), Expect = 0.0
 Identities = 1370/1535 (89%), Positives = 1457/1535 (94%)
 Frame = -2

Query: 5641 MDTRFPFSPAEVAKVRMVQFGIISPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 5462
            MD RFP+SPAEVAKVRMVQFGI+SPDEIRQMSVVQIE  ETTERGKPK  GLSD RLGTI
Sbjct: 1    MDMRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEFSETTERGKPKPGGLSDLRLGTI 60

Query: 5461 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHK 5282
            DRKMKCETCTANMAECPGHFGHLELAKPMFHIGF+KTVLSIMRCVCFNCSKILADE+DHK
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDHK 120

Query: 5281 FKLAQKVKNPKARLKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTI 5102
            FK A K+KNPK RLK+ILDACKNKTKCEGGD+I+   +D++EPVKK+RGGCGAQQP++TI
Sbjct: 121  FKQALKIKNPKNRLKKILDACKNKTKCEGGDDIDVHSQDTDEPVKKSRGGCGAQQPRMTI 180

Query: 5101 EGMKMIAEYKLQRKKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYAR 4922
            EGMKMIAEYK QRKK+DDQEQLPEPVERKQ L+AERVL VLKRISD+DC LLG NPKYAR
Sbjct: 181  EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDDDCRLLGFNPKYAR 240

Query: 4921 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 4742
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENL++QE+ GAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKKQEKGGAPAHIIS 300

Query: 4741 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4562
            EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 4561 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 4382
            TVITPDP INIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 4381 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4202
            +DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 4201 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 4022
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 4021 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 3842
            LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600

Query: 3841 LMRTSAWHSESETGFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3662
            L+RT+AWHS+SE G +TPGDT VRIE+GE+++GT+CKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LIRTAAWHSDSERGVITPGDTLVRIEKGELLSGTVCKKTLGTSTGSLIHVIWEEVGPDAA 660

Query: 3661 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQL 3482
            RKFLGHTQWLVNYWLLQ  FSIGIGDTIADA+TMEKINETIS AKN VKELIR AQ K+L
Sbjct: 661  RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISNAKNAVKELIRKAQNKEL 720

Query: 3481 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 3302
            E +PGRTMM+SFEN VNQVLN+ARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EPKPGRTMMESFENEVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3301 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3122
            ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 3121 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQR 2942
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ+
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900

Query: 2941 LDSLKMKKGEFNKVYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQ 2762
            LDSLKMKK EF++V+ YE DDENWNP+Y+  +H+DDL+NIRE R+VFDAE++KLE DR Q
Sbjct: 901  LDSLKMKKSEFDRVFKYELDDENWNPTYMYQDHIDDLKNIRELRDVFDAEVQKLEADRYQ 960

Query: 2761 LGKDIVTTGDDVWPMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVH 2582
            LG +I TTGD  WP+PVNL+RLIWNAQKTFK+D RRPS +HPME VEAVDKLQERLKVV 
Sbjct: 961  LGTEIATTGDSSWPLPVNLRRLIWNAQKTFKVDKRRPSDIHPMEAVEAVDKLQERLKVVP 1020

Query: 2581 GDDPMSTEAQKNATLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASG 2402
            GDDP+S EAQKNATLFF ILLRSTLASKRVL++YRLT+EAF+WV+GEIESRFLQSLVA G
Sbjct: 1021 GDDPLSVEAQKNATLFFGILLRSTLASKRVLEDYRLTREAFDWVIGEIESRFLQSLVAPG 1080

Query: 2401 EMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLK 2222
            EMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AKKIKTPSLS++L 
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSIFLI 1140

Query: 2221 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 2042
            PE NKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEED+DFVKSYYEMPDEEI
Sbjct: 1141 PECNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEI 1200

Query: 2041 SPDKISPWLLRVELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1862
            SP+KISPWLLR+ELNREMMVDKKL+MADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 SPEKISPWLLRIELNREMMVDKKLNMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260

Query: 1861 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMP 1682
            NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK  K  +FD++EGF  
Sbjct: 1261 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQSKVSKFDENEGFKT 1320

Query: 1681 EVEWMLDTEGVNLLAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDG 1502
              EWMLDTEGVNLLAV+C+E+VDA RTTSNHLIEV+EVLGIEAVR+SLLDELRVVISFDG
Sbjct: 1321 IEEWMLDTEGVNLLAVMCNENVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380

Query: 1501 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1322
            SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAVYAE D+
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAEADY 1440

Query: 1321 LRGVTENIMLGQLAPIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIMGTP 1142
            LRGVTENIMLGQLAPIGTGDCALYLND ML++AI+LQLPSYM+GLDFGMTP+RSP+  TP
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDDMLKNAIELQLPSYMDGLDFGMTPARSPVSVTP 1500

Query: 1141 YRDGMMSPNYMLSPNLRLSPTNDAQFSPYVGGMAF 1037
            Y DGMMSP+Y+LSP+LRLSPT DAQFSPYV GM F
Sbjct: 1501 YHDGMMSPSYLLSPSLRLSPTTDAQFSPYVSGMPF 1535


>gb|EYU42342.1| hypothetical protein MIMGU_mgv1a000091mg [Mimulus guttatus]
          Length = 1842

 Score = 2793 bits (7239), Expect = 0.0
 Identities = 1373/1537 (89%), Positives = 1461/1537 (95%), Gaps = 2/1537 (0%)
 Frame = -2

Query: 5641 MDTRFPFSPAEVAKVRMVQFGIISPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 5462
            MD RFPFSPAEVAKVR+VQFGI+SPDEIRQMSVV IEH ETTERGKPKI GLSDPRLGTI
Sbjct: 1    MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 60

Query: 5461 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHK 5282
            DRKMKCETC ANMAECPGHFGHLELAKPMFHIGFMK VLSI+RCVCFNCSKILADE++ K
Sbjct: 61   DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKIVLSILRCVCFNCSKILADEEEPK 120

Query: 5281 FKLAQKVKNPKARLKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTI 5102
            FK A +++NPK RL++ILDACKNKTKC+GGDEI+G  +D+EEPVKK+RGGCGAQQPK++I
Sbjct: 121  FKQAMRIRNPKNRLRKILDACKNKTKCDGGDEIDGHSQDTEEPVKKSRGGCGAQQPKISI 180

Query: 5101 EGMKMIAEYKLQRKKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYAR 4922
            +GMKM+AEYKLQ+KKSDDQ+Q+PEPVERKQQLSAE+VLS+LKRI+DEDC LLGLNPK+AR
Sbjct: 181  DGMKMVAEYKLQKKKSDDQDQMPEPVERKQQLSAEKVLSILKRITDEDCQLLGLNPKFAR 240

Query: 4921 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 4742
            PDWMILQVL        PSVMMDTS+RSEDDLTHQLAMIIRHNENL+RQERNGAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300

Query: 4741 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4562
            EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 4561 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 4382
            TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 420

Query: 4381 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4202
            +DGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 4201 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 4022
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540

Query: 4021 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 3842
            LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600

Query: 3841 LMRTSAWHSESETGFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3662
            L+R SAWH E+E GF+TPGDTQVRIE+GE++TGTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LLRYSAWHQETEKGFITPGDTQVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAA 660

Query: 3661 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQL 3482
            RKFLGHTQWLVNYWLLQ AFS+GIGDTIADA+TMEKINETIS AKNEVKELIRAAQEKQL
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSMGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 720

Query: 3481 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 3302
            E EPGRTMM+SFENRVNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3301 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3122
            ACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 3121 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQR 2942
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 900

Query: 2941 LDSLKMKKGEFNKVYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQ 2762
            L+SLK+KK +FN +Y YE D+ NWNP+Y+LPE V+DL+ IRE R+VFDAE+ KLE DR Q
Sbjct: 901  LESLKLKKSDFNDMYKYEIDNSNWNPNYMLPEAVEDLKTIREIRSVFDAEVTKLEVDRFQ 960

Query: 2761 LGKDIVTTGDDVWPMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVH 2582
            LG +I TTGD+ WP+PVN+KRL+ NAQKTFK+D RRPS MHPMEIVEAVDKLQERLKVV 
Sbjct: 961  LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 1020

Query: 2581 GDDPMSTEAQKNATLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASG 2402
            GDD +STEAQKNATLFFNILLRS LASKRVLKEYRLT+EAFEWV+GEIESRFLQSLVA+G
Sbjct: 1021 GDDYLSTEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 1080

Query: 2401 EMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLK 2222
            EMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140

Query: 2221 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 2042
            P+V+KTKE+AKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEED++FVKSYYEMPDEEI
Sbjct: 1141 PDVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEEI 1200

Query: 2041 SPDKISPWLLRVELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1862
             PDKISPWLLR+ELNREMMVDKKLSMADIAEKIN EF DDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINTEFSDDLTCIFNDDNAEKLILRIRIM 1260

Query: 1861 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMP 1682
            N++APKGEL DESAEDDVFLKKIE NMLTEMALRGIPDINKVFIKN K  +FD+++GF  
Sbjct: 1261 NEQAPKGELADESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 1320

Query: 1681 EVEWMLDTEGVNLLAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDG 1502
            E EWMLDTEGVNLLAV+CHE+VD  RTTSNHLIEV+EVLGIEAVR+SLLDELRVVISFDG
Sbjct: 1321 ENEWMLDTEGVNLLAVMCHEEVDVRRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380

Query: 1501 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1322
            SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETD 
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 1440

Query: 1321 LRGVTENIMLGQLAPIGTGDCALYLNDKMLEHAIDLQLPSYME-GLDFGMTPSRSPIMGT 1145
            LRGVTENIMLGQLAPIGTGDCAL LN++ML+ AI++ LPSYME GL+FGMTP RSP  GT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALLLNEQMLKQAIEIPLPSYMEGGLEFGMTPGRSPHSGT 1500

Query: 1144 PYRDGMMSPNYML-SPNLRLSPTNDAQFSPYVGGMAF 1037
            PY DGMMSPNY+L SPNLRLSP  DAQFSPYVGGMAF
Sbjct: 1501 PYHDGMMSPNYLLMSPNLRLSPVTDAQFSPYVGGMAF 1537


>ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1 [Solanum
            lycopersicum]
          Length = 1846

 Score = 2792 bits (7237), Expect = 0.0
 Identities = 1374/1536 (89%), Positives = 1462/1536 (95%), Gaps = 1/1536 (0%)
 Frame = -2

Query: 5641 MDTRFPFSPAEVAKVRMVQFGIISPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 5462
            MD RFPFSPAEVAKVR VQFGI+SPDEIRQMSVV IEHGETTERGKPK  GLSDPRLGTI
Sbjct: 1    MDLRFPFSPAEVAKVRTVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60

Query: 5461 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHK 5282
            DRKMKCETC ANMAECPGHFGHLELAKPMFHIGFMK VLSI+RCVCFNCSKILADEDD K
Sbjct: 61   DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120

Query: 5281 FKLAQKVKNPKARLKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTI 5102
            FK A +++NPK RL+++LDACKNKTKCEGGDEI+ QG+D+EEPVKK+RGGCGAQQPK++I
Sbjct: 121  FKQAMRIRNPKNRLRKMLDACKNKTKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKISI 180

Query: 5101 EGMKMIAEYKLQRKKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYAR 4922
            +GMKM+AEYK+Q+KKSDD EQ+PEPVERKQQLSAERVLS+LKR+SDEDC LLGLNP++AR
Sbjct: 181  DGMKMVAEYKMQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEFAR 240

Query: 4921 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 4742
            PDWMILQ L        PSVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNGAPAHIIS
Sbjct: 241  PDWMILQALPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300

Query: 4741 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4562
            EFAQLLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360

Query: 4561 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 4382
            TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 4381 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4202
            +DGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 4201 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 4022
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540

Query: 4021 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 3842
            LLGCRK+TKRDTFIEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKVPAPVILKPRPLWTGKQVFNLIIPKQIN 600

Query: 3841 LMRTSAWHSESETGFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3662
            L+R SAWH++SE G++TPGDTQVRIE+GE+++GTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LLRYSAWHNDSEKGYITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660

Query: 3661 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQL 3482
            RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETIS AK +VKELI+AAQEK L
Sbjct: 661  RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISNAKAKVKELIKAAQEKLL 720

Query: 3481 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 3302
            EAEPGRTMM+SFENRVNQVLNKARDDAGSSA+KSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3301 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3122
            ACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 3121 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQR 2942
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+Q+
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIETQK 900

Query: 2941 LDSLKMKKGEFNKVYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQ 2762
            LDSLK KKG F+ +Y YE DD NWNPSY+LPE V+DL+ IRE R+VFDAE++KLE DR Q
Sbjct: 901  LDSLKAKKGTFDDMYAYEIDDPNWNPSYMLPEAVEDLKGIREIRSVFDAEVQKLEADRHQ 960

Query: 2761 LGKDIVTTGDDVWPMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVH 2582
            LG +I  TGD+ WP+PVN++RL+ NAQKTFKID RRPS MHPMEIVEAVDKLQERLKVV 
Sbjct: 961  LGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVVP 1020

Query: 2581 GDDPMSTEAQKNATLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASG 2402
            GDD +S EAQKNATLFFNILLRS LASKRVLKEYRL++EAFEWVVGEIESRFLQSLVA G
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLSREAFEWVVGEIESRFLQSLVAPG 1080

Query: 2401 EMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLK 2222
            EMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140

Query: 2221 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 2042
            PEV KTKERAK VQCALEYTTLRSVTQATEVWYDPDPMST+IEED++FVKSYYEMPDEEI
Sbjct: 1141 PEVGKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 1200

Query: 2041 SPDKISPWLLRVELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1862
             PDKISPWLLR+ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260

Query: 1861 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMP 1682
            NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKN K  +FDD+EGF  
Sbjct: 1261 NDEAPKGEL-DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKA 1319

Query: 1681 EVEWMLDTEGVNLLAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDG 1502
            E EWMLDTEGVNLLAV+ HEDVDA+RTTSNHLIEV+EVLGIEAVR+SLLDELRVVISFDG
Sbjct: 1320 ENEWMLDTEGVNLLAVMTHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1379

Query: 1501 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1322
            SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE+DH
Sbjct: 1380 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDH 1439

Query: 1321 LRGVTENIMLGQLAPIGTGDCALYLNDKMLEHAIDLQLPSYME-GLDFGMTPSRSPIMGT 1145
            LRGVTENIMLGQLAPIGTG C+LYLN++ML+ AI++ LPSYME GL+FGMTP RSPI GT
Sbjct: 1440 LRGVTENIMLGQLAPIGTGGCSLYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGT 1499

Query: 1144 PYRDGMMSPNYMLSPNLRLSPTNDAQFSPYVGGMAF 1037
            PY DGMMSPNY+LSPN+R+SP  DAQFSPYVGGMAF
Sbjct: 1500 PYHDGMMSPNYLLSPNMRMSPITDAQFSPYVGGMAF 1535


>ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Solanum
            tuberosum]
          Length = 1839

 Score = 2791 bits (7234), Expect = 0.0
 Identities = 1373/1536 (89%), Positives = 1461/1536 (95%), Gaps = 1/1536 (0%)
 Frame = -2

Query: 5641 MDTRFPFSPAEVAKVRMVQFGIISPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 5462
            MD RFPFSPAEVAKVR VQFGI+SPDEIRQMSVV IEHGETTERGKPK  GLSDPRLGTI
Sbjct: 1    MDLRFPFSPAEVAKVRTVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60

Query: 5461 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHK 5282
            DRKMKCETC ANMAECPGHFGHLELAKPMFHIGFMK VLSI+RCVCFNCSKILADEDD K
Sbjct: 61   DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120

Query: 5281 FKLAQKVKNPKARLKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTI 5102
            FK A +++NPK RL+++LDACKNKTKCEGGDEI+ QG D+EEPVKK+RGGCGAQQPK++I
Sbjct: 121  FKQAMRIRNPKNRLRKMLDACKNKTKCEGGDEIDVQGHDTEEPVKKSRGGCGAQQPKISI 180

Query: 5101 EGMKMIAEYKLQRKKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYAR 4922
            +GMKM+AEYK+Q+KKSDD EQ+PEPVERKQQLSAERVLS+LKR+SDEDC LLGLNP++AR
Sbjct: 181  DGMKMVAEYKMQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEFAR 240

Query: 4921 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 4742
            PDWMILQ L        PSVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNGAPAHIIS
Sbjct: 241  PDWMILQALPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300

Query: 4741 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4562
            EFAQLLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360

Query: 4561 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 4382
            TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 4381 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4202
            +DGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 4201 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 4022
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540

Query: 4021 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 3842
            LLGCRK+TKRDTFIEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKVPAPVILKPRPLWTGKQVFNLIIPKQIN 600

Query: 3841 LMRTSAWHSESETGFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3662
            L+R SAWH++SE G++TPGDTQVRIE+GE+++GTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LLRYSAWHNDSEKGYITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660

Query: 3661 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQL 3482
            RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETIS AK +VKELI+AAQEK L
Sbjct: 661  RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISNAKAKVKELIKAAQEKLL 720

Query: 3481 EAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 3302
            EAEPGRTMM+SFENRVNQVLNKARDDAGSSA+KSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3301 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3122
            ACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 3121 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQR 2942
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+Q+
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIETQK 900

Query: 2941 LDSLKMKKGEFNKVYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQ 2762
            LDSLK KKG F+ +Y YE DD NWNPSY+LPE V+DL+ IRE R+VFDAE++KLE DR Q
Sbjct: 901  LDSLKAKKGTFDDMYAYEIDDPNWNPSYMLPEAVEDLKGIREIRSVFDAEVQKLEADRHQ 960

Query: 2761 LGKDIVTTGDDVWPMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVH 2582
            LG +I  TGD+ WP+PVN++RL+ NAQKTFKID RRPS MHPMEIVEAVDKLQERLKVV 
Sbjct: 961  LGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVVP 1020

Query: 2581 GDDPMSTEAQKNATLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASG 2402
            GDD +S EAQKNATLFFNILLRS LASKRVLKEYRL++EAFEWVVGEIESRFLQSLVA G
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLSREAFEWVVGEIESRFLQSLVAPG 1080

Query: 2401 EMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLK 2222
            EMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140

Query: 2221 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 2042
            PEV KTKERAK VQCALEYTTLRSVTQATEVWYDPDPMST+IEED++FVKSYYEMPDEEI
Sbjct: 1141 PEVGKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 1200

Query: 2041 SPDKISPWLLRVELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1862
             PDKISPWLLR+ELNREMMVDKKLSMADIAEKIN+EFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINVEFDDDLTCIFNDDNAEKLILRIRIM 1260

Query: 1861 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMP 1682
            NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKN K  +FDD+EGF  
Sbjct: 1261 NDEAPKGEL-DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKA 1319

Query: 1681 EVEWMLDTEGVNLLAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDG 1502
            E EWMLDTEGVNLLAV+ HEDVDA+RTTSNHLIEV+EVLGIEAVR+SLLDELRVVISFDG
Sbjct: 1320 ENEWMLDTEGVNLLAVMTHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1379

Query: 1501 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1322
            SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE+DH
Sbjct: 1380 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDH 1439

Query: 1321 LRGVTENIMLGQLAPIGTGDCALYLNDKMLEHAIDLQLPSYME-GLDFGMTPSRSPIMGT 1145
            LRGVTENIMLGQLAPIGTG C+LYLN++ML+ AI++ LPSYME GL+FGMTP RSPI GT
Sbjct: 1440 LRGVTENIMLGQLAPIGTGSCSLYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGT 1499

Query: 1144 PYRDGMMSPNYMLSPNLRLSPTNDAQFSPYVGGMAF 1037
            PY DGMMSPNY+LSPN+R+SP  DAQFSPYVGGMAF
Sbjct: 1500 PYHDGMMSPNYLLSPNMRMSPITDAQFSPYVGGMAF 1535