BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00003274
         (902 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptas...    77   1e-11
gb|ABD32279.2| reverse transcriptase, putative [Medicago truncat...    76   2e-11
ref|XP_004296004.1| PREDICTED: putative ribonuclease H protein A...    75   3e-11
ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein A...    73   1e-10
ref|XP_004295654.1| PREDICTED: uncharacterized protein LOC101314...    56   2e-09
ref|XP_002522932.1| conserved hypothetical protein [Ricinus comm...    65   3e-08
gb|ABD32264.2| RNA-directed DNA polymerase , putative [Medicago ...    65   5e-08
ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medica...    64   8e-08
gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptas...    61   5e-07
ref|XP_004305739.1| PREDICTED: uncharacterized protein LOC101306...    61   7e-07
ref|XP_002280533.2| PREDICTED: uncharacterized protein LOC100266...    58   4e-06
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    58   6e-06

>gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 642

 Score = 76.6 bits (187), Expect = 1e-11
 Identities = 37/96 (38%), Positives = 55/96 (57%), Gaps = 5/96 (5%)
 Frame = -2

Query: 817 LVKSTVGFYPTMLHSMMVYLWAHSILTIIEKWCRNFILVS-----KSVTVPWNTVC*PLE 653
           LVKS V     ++H+M +Y W   IL  +EKW +NFI        K VTV W  +C   E
Sbjct: 538 LVKSVV--QSMLVHTMSIYSWPIKILKEMEKWIKNFIWSGDVTKRKMVTVAWRKICADYE 595

Query: 652 KGGLGIRKLSATNKAALMKLCWNIITVNSDWASFFK 545
           +GGLG++ L   N+A  +K+CWN++  +  WA+  +
Sbjct: 596 EGGLGVKSLICLNEATNLKICWNLMQSDEQWANIIR 631


>gb|ABD32279.2| reverse transcriptase, putative [Medicago truncatula]
          Length = 480

 Score = 75.9 bits (185), Expect = 2e-11
 Identities = 45/149 (30%), Positives = 74/149 (49%), Gaps = 12/149 (8%)
 Frame = -2

Query: 817 LVKSTVGFYPTMLHSMMVYLWAHSILTIIEKWCRNFI-----LVSKSVTVPWNTVC*PLE 653
           LVKS +  +  +++S  +Y+W   +L  ++ W +NFI        K  TV W  +C P  
Sbjct: 266 LVKSII--HGMLVYSFQIYMWPRRLLHQLDSWIKNFIWSGDIYTHKVCTVSWKVMCRPWA 323

Query: 652 KGGLGIRKLSATNKAALMKLCWNIITVNSDWASFFKMPIRNQYLHFSFRI*AFYTHYFLQ 473
            GGL I+     N++ ++ L W   T +S WA+     + +++L     +     HYFL 
Sbjct: 324 AGGLDIKPTCLINESLILLLAWQFSTADSQWAAL----MHHRFLKHGTPL----QHYFLS 375

Query: 472 AIH-------TTFCINSQWILGSGCNINL 407
           ++        +T   NS WI+G+G NINL
Sbjct: 376 SMWGGIKEHLSTISSNSIWIVGTGANINL 404


>ref|XP_004296004.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 751

 Score = 75.5 bits (184), Expect = 3e-11
 Identities = 45/139 (32%), Positives = 66/139 (47%), Gaps = 5/139 (3%)
 Frame = -2

Query: 796 FYPTMLHSMMVYLWAHSILTIIEKWCRNFI-----LVSKSVTVPWNTVC*PLEKGGLGIR 632
           F   +LHS  +YLWA S+L+ +    RNFI      + K VT+ W  VC P  + GL +R
Sbjct: 242 FQSMLLHSFSIYLWATSLLSHLSACARNFIWSGDLAIRKLVTISWQQVCTPRNEAGLDLR 301

Query: 631 KLSATNKAALMKLCWNIITVNSDWASFFKMPIRNQYLHFSFRI*AFYTHYFLQAIHTTFC 452
            L A   A L+ L W  +  +S W SF        + H  F+       + L+ +     
Sbjct: 302 NLKALYTAGLISLAWQTLLQSSSWGSFACRRF-TIFRHMKFQYFTSSVWHGLKRVLPLLF 360

Query: 451 INSQWILGSGCNINLIIGW 395
            +S+WI+G G   N I+ W
Sbjct: 361 EHSRWIIGDG---NSILFW 376



 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 25/67 (37%), Positives = 38/67 (56%)
 Frame = -3

Query: 210 TGIFTMKSAYELVADVQGLDIFCKKIWEPFIPPSRSLIIWLLFYNRIPTHDNLKKRGKVI 31
           +GIF+    YELV        +   +W  FIPP  S++ W +F+ ++PT D L++RG   
Sbjct: 449 SGIFSFSDGYELVRPYFEKLDWASSVWHSFIPPRYSVLAWRIFHLKLPTDDQLQRRGIPF 508

Query: 30  ISACMLC 10
           +S C LC
Sbjct: 509 VSVCQLC 515


>ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 872

 Score = 73.2 bits (178), Expect = 1e-10
 Identities = 37/105 (35%), Positives = 61/105 (58%), Gaps = 5/105 (4%)
 Frame = -2

Query: 823 LVLVKSTVGFYPTMLHSMMVYLWAHSILTIIEKWCRNFI----LVSKSVT-VPWNTVC*P 659
           L L+KS +  Y   +++  VY W  S+L  +E+WCRNF+    +  + +  V W + C P
Sbjct: 295 LQLIKSVI--YSMFVYTFQVYEWPVSLLRKVERWCRNFLWSGDIDKRGIPLVSWTSCCAP 352

Query: 658 LEKGGLGIRKLSATNKAALMKLCWNIITVNSDWASFFKMPIRNQY 524
           +++GGLG++KL   N + L+K CW I T + +   F    IRN++
Sbjct: 353 IDEGGLGLKKLDVLNSSLLLKRCWEIFTSSFEGCCF----IRNRF 393


>ref|XP_004295654.1| PREDICTED: uncharacterized protein LOC101314263 [Fragaria vesca
           subsp. vesca]
          Length = 839

 Score = 56.2 bits (134), Expect(2) = 2e-09
 Identities = 30/96 (31%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
 Frame = -2

Query: 685 VPWNTVC*PLEKGGLGIRKLSATNKAALMKLCWNIITVNSDWASFFKMPIRNQYLHFSFR 506
           V W   C PL++GGLG+R + A N+A L+K  W+ +T ++  A+FF      ++L  S +
Sbjct: 432 VAWKKCCAPLKEGGLGVRNIMALNQAFLLKKFWDFLTKSTTAAAFFSA----RFLQRSGQ 487

Query: 505 I*AFYTHYF----LQAIHTTFCINSQWILGSGCNIN 410
             ++Y        ++ + T    NS+W++G+G +I+
Sbjct: 488 PCSYYKRSSIWPGMRPLFTDILYNSKWVVGNGHSID 523



 Score = 32.7 bits (73), Expect(2) = 2e-09
 Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
 Frame = -1

Query: 416 YQLDNWLGFYLKDTV--DLSQVHDVDAKVCALIQD----GRWVILDHIASIIGDIDELIY 255
           + +D W G +L  ++   L  VH +   +C  + D    G W+   ++ + +  +   I 
Sbjct: 520 HSIDFWHGNWLNGSIIDKLGIVHQLGKSLCGKVSDFILNGSWLCSTNLNAELAALWSEIL 579

Query: 254 STPILPIGVDDKLVSLEFLQ*NLPMS 177
           +  +    +DDKLV L+ L+ +L +S
Sbjct: 580 AIQLPSYDIDDKLVWLDSLEGSLSLS 605


>ref|XP_002522932.1| conserved hypothetical protein [Ricinus communis]
           gi|223537826|gb|EEF39443.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 303

 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 35/106 (33%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
 Frame = -2

Query: 823 LVLVKSTVGFYPTMLHSMMVYLWAHSILTIIEKWCRNFILVS-----KSVTVPWNTVC*P 659
           L L+ S +  + ++LH+ M+Y W  S+L  IEK  RNF+        K VTV W   C P
Sbjct: 177 LALINSVI--FASLLHTFMMYRWPSSLLKSIEKAIRNFLWTGSVSYKKLVTVKWGHCCKP 234

Query: 658 LEKGGLGIRKLSATNKAALMKLCWNIITVNSDWASFFKMPIRNQYL 521
           + +GG+G+++L   N+  L ++ W   + +    SF    +R++YL
Sbjct: 235 ISEGGIGLKRLDVLNRTMLCRIAWKFYSND----SFVYRFLRSRYL 276


>gb|ABD32264.2| RNA-directed DNA polymerase , putative [Medicago truncatula]
          Length = 161

 Score = 64.7 bits (156), Expect = 5e-08
 Identities = 36/84 (42%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
 Frame = -2

Query: 817 LVKSTVGFYPTMLHSMMVYLWAHSILTIIEKWCRNFILVS-----KSVTVPWNTVC*PLE 653
           +VKS +     + HS+ VY W  S+L  +EK  +NFI        K VTV W  +C P +
Sbjct: 79  MVKSVI--QSMLTHSITVYNWPTSLLKDLEKSIKNFIWSGDTSKRKLVTVAWKKLCRPFD 136

Query: 652 KGGLGIRKLSATNKAALMKLCWNI 581
           +GGL IR L   N A+ +KLCWNI
Sbjct: 137 QGGLRIRSLIQLNSASNLKLCWNI 160


>ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula]
           gi|355496705|gb|AES77908.1| Cytochrome c biogenesis
           protein ccsA [Medicago truncatula]
          Length = 666

 Score = 63.9 bits (154), Expect = 8e-08
 Identities = 27/66 (40%), Positives = 42/66 (63%)
 Frame = -3

Query: 207 GIFTMKSAYELVADVQGLDIFCKKIWEPFIPPSRSLIIWLLFYNRIPTHDNLKKRGKVII 28
           G  T + AY+ + +     ++ K +W  +IPPSRS I W L +N++PT +NL+KRG +I+
Sbjct: 16  GDLTNQLAYKFINETGNHVLWDKFLWNSYIPPSRSFITWRLLHNKLPTDENLRKRGCLIV 75

Query: 27  SACMLC 10
           S C  C
Sbjct: 76  SICCFC 81


>gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 528

 Score = 61.2 bits (147), Expect = 5e-07
 Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
 Frame = -2

Query: 865 LSNGSNYHMQIH*WLVLVKSTVGFYPTMLHSMMVYLWAHSILTIIEKWCRNFILVS---- 698
           LSN     + I   + L+KS       ++H++ +Y W   +L  +E   RNFI       
Sbjct: 428 LSNWKASILSIAGRVQLIKSVA--QSMLIHTITIYDWPSFLLKELETCFRNFIWSGDITK 485

Query: 697 -KSVTVPWNTVC*PLEKGGLGIRKLSATNKAALMKLCWNII 578
            K VTV W  +C P  +GGLGIR LS  N A  +KLCW+++
Sbjct: 486 RKLVTVAWKKLCKPQSQGGLGIRSLSQLNAAGNLKLCWDML 526


>ref|XP_004305739.1| PREDICTED: uncharacterized protein LOC101306660 [Fragaria vesca
           subsp. vesca]
          Length = 330

 Score = 60.8 bits (146), Expect = 7e-07
 Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 5/102 (4%)
 Frame = -2

Query: 865 LSNGSNYHMQIH*WLVLVKSTVGFYPTMLHSMMVYLWAHSILTIIEKWCRNFILVSKS-- 692
           +SN     + +   + LV S V     + HS  +Y W  ++L  +  W RNFI       
Sbjct: 146 MSNWKGNSLSMAGRVTLVNSVV--ISMLSHSFTIYAWPKTVLQQVRNWIRNFIWTGNVSC 203

Query: 691 ---VTVPWNTVC*PLEKGGLGIRKLSATNKAALMKLCWNIIT 575
                V W   C PL++GGLG+R + A N+A L+K  W+ +T
Sbjct: 204 RAYYPVAWKKCCAPLKEGGLGVRNIMALNQAFLLKKFWDFLT 245


>ref|XP_002280533.2| PREDICTED: uncharacterized protein LOC100266246 [Vitis vinifera]
          Length = 2234

 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 38/105 (36%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
 Frame = -2

Query: 823  LVLVKSTVGFYPTMLHSMMVYLWAHSILTIIEKWCRNFILV-----SKSVTVPWNTVC*P 659
            L L+KST+  +P  L+ M V+    S+   IEK  R+F+       +KS  V W  VC  
Sbjct: 1282 LTLIKSTLSSFP--LYQMSVFRMPKSVARRIEKLQRDFLWGGTNGGTKSHLVKWEAVCVE 1339

Query: 658  LEKGGLGIRKLSATNKAALMKLCWNIITVNSDWASFFKMPIRNQY 524
             EKGGLG+RK++  NKA L K  W       +   F+K  +  +Y
Sbjct: 1340 KEKGGLGLRKITILNKALLGKWIWRFACAKEE---FWKKVLEAKY 1381


>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H;
            Endonuclease/exonuclease/phosphatase [Medicago
            truncatula]
          Length = 1246

 Score = 57.8 bits (138), Expect = 6e-06
 Identities = 32/97 (32%), Positives = 48/97 (49%)
 Frame = -2

Query: 697  KSVTVPWNTVC*PLEKGGLGIRKLSATNKAALMKLCWNIITVNSDWASFFKMPIRNQYLH 518
            K  TV W  +C P  +GGL I+     N AA++KL WN+++ NS WA   K    +Q   
Sbjct: 772  KVCTVSWKILCRPWSEGGLDIKSTRLINNAAMLKLAWNLLSSNSQWAVLLKRRFFSQGQP 831

Query: 517  FSFRI*AFYTHYFLQAIHTTFCINSQWILGSGCNINL 407
              + + +   H     + +    N  WI+G+G  INL
Sbjct: 832  IRYFVKSSVWHGVKNHM-SILRQNKLWIVGTGDRINL 867