BLASTX nr result
ID: Paeonia23_contig00001945
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia23_contig00001945
(707 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 396 e-108
ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 384 e-104
ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [... 383 e-104
gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis] 377 e-102
ref|XP_007225261.1| hypothetical protein PRUPE_ppa001524mg [Prun... 374 e-101
emb|CBI26820.3| unnamed protein product [Vitis vinifera] 374 e-101
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V... 374 e-101
ref|XP_006416969.1| hypothetical protein EUTSA_v10006629mg [Eutr... 374 e-101
gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus... 373 e-101
ref|XP_004498237.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 373 e-101
ref|XP_004498236.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 373 e-101
ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Th... 370 e-100
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum] 370 e-100
ref|XP_006306626.1| hypothetical protein CARUB_v10008144mg [Caps... 369 e-100
ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 369 e-100
gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa... 369 e-100
ref|XP_002892830.1| RNA-dependent RNA polymerase 1 [Arabidopsis ... 369 e-100
emb|CCD74482.1| RNA-dependent RNA polymerase 1 [Arabidopsis hall... 367 2e-99
ref|XP_002870481.1| RNA-dependent RNA polymerase 1 [Arabidopsis ... 367 2e-99
emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum] 366 5e-99
>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
Length = 1132
Score = 396 bits (1018), Expect = e-108
Identities = 188/235 (80%), Positives = 209/235 (88%)
Frame = +1
Query: 1 RPHPNECSGSDLDGDIYFVCWDPELIPPSQTKPMDYTPAPSVQLDHDVTIEEVEEYFANY 180
RPHPNECSGSDLDGDIYFVCWD ELIPP Q PMDYTPA S+QLDHDV IE+VEEYF NY
Sbjct: 808 RPHPNECSGSDLDGDIYFVCWDDELIPPQQDPPMDYTPAQSMQLDHDVQIEDVEEYFTNY 867
Query: 181 IGNDSLGIIANAHTVFADKEPKKAKSKPCLKLARLFSIAVDSPKTGEPAEIPPYLFVKEY 360
I NDSLGIIANAHTVFAD+EP KA+S+PCL+LA FSIAVD PKTG PAEIPP+L+VKEY
Sbjct: 868 IVNDSLGIIANAHTVFADREPHKARSEPCLQLAEKFSIAVDFPKTGVPAEIPPHLYVKEY 927
Query: 361 PDFMEKPDKPTYVSPNVIGKLFREVKDIAPHTGSIGTVTQDVAKQSYDPDMKVNGFENYI 540
PDFMEKPDKPTY S NVIGKLFR VKDIAPHT I T++VA++SYDPDM+V+GFE++I
Sbjct: 928 PDFMEKPDKPTYESQNVIGKLFRAVKDIAPHTSCIRLFTKEVARRSYDPDMEVDGFEDHI 987
Query: 541 DDAFYHKSNYDYKLGNLLDYYGIKSEAEILSGNIMKMSKSFNRRRDTEAIVMAVR 705
DDA YHK NYDYKLGNL+DYYGIK+EAEIL+G+IMKMSKSF +RRD EAI MAVR
Sbjct: 988 DDAIYHKGNYDYKLGNLMDYYGIKTEAEILTGSIMKMSKSFTKRRDAEAIGMAVR 1042
>ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Fragaria vesca subsp.
vesca]
Length = 1119
Score = 384 bits (987), Expect = e-104
Identities = 180/235 (76%), Positives = 206/235 (87%)
Frame = +1
Query: 1 RPHPNECSGSDLDGDIYFVCWDPELIPPSQTKPMDYTPAPSVQLDHDVTIEEVEEYFANY 180
RPHPNECSGSDLDGDIYFVCWDPELIPP Q +PMDYTPAP +++D DVTIEEVEEYF NY
Sbjct: 793 RPHPNECSGSDLDGDIYFVCWDPELIPPKQIQPMDYTPAPPIEMDQDVTIEEVEEYFVNY 852
Query: 181 IGNDSLGIIANAHTVFADKEPKKAKSKPCLKLARLFSIAVDSPKTGEPAEIPPYLFVKEY 360
I NDSLGIIANAHTVFAD + KA S PCL+LA+LFSIAVD PKTG PAEIPP L+ KEY
Sbjct: 853 IVNDSLGIIANAHTVFADSKLDKAMSHPCLQLAKLFSIAVDFPKTGVPAEIPPELYAKEY 912
Query: 361 PDFMEKPDKPTYVSPNVIGKLFREVKDIAPHTGSIGTVTQDVAKQSYDPDMKVNGFENYI 540
PDFMEKPDK TY+S NVIG+LFREVKDIAPH SI + T+ VA + YDPDM+V+GFE+Y+
Sbjct: 913 PDFMEKPDKRTYISHNVIGQLFREVKDIAPHDSSIASFTRQVATKCYDPDMEVDGFEDYL 972
Query: 541 DDAFYHKSNYDYKLGNLLDYYGIKSEAEILSGNIMKMSKSFNRRRDTEAIVMAVR 705
+DAFYHK NYDYKLGN+LDYYGIK+EAEILSG+IM +SKSF +RRD +AI +AV+
Sbjct: 973 EDAFYHKGNYDYKLGNMLDYYGIKTEAEILSGSIMTLSKSFTKRRDADAINVAVK 1027
>ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [Populus trichocarpa]
gi|222851356|gb|EEE88903.1| RNA-directed RNA Polymerase
family protein [Populus trichocarpa]
Length = 1133
Score = 383 bits (983), Expect = e-104
Identities = 183/235 (77%), Positives = 203/235 (86%)
Frame = +1
Query: 1 RPHPNECSGSDLDGDIYFVCWDPELIPPSQTKPMDYTPAPSVQLDHDVTIEEVEEYFANY 180
RPHPNECSGSDLDGDIYFVCWDPELIP Q PMDYTP P +QLDHDVTIEEVEEYF NY
Sbjct: 804 RPHPNECSGSDLDGDIYFVCWDPELIPSQQISPMDYTPEPPLQLDHDVTIEEVEEYFTNY 863
Query: 181 IGNDSLGIIANAHTVFADKEPKKAKSKPCLKLARLFSIAVDSPKTGEPAEIPPYLFVKEY 360
I NDSLG+IANAHT ADKE KA S+PC++LAR FSIAVD PKTG PAEIP L +EY
Sbjct: 864 IVNDSLGVIANAHTAHADKESLKAMSEPCVELARKFSIAVDFPKTGVPAEIPSNLRAREY 923
Query: 361 PDFMEKPDKPTYVSPNVIGKLFREVKDIAPHTGSIGTVTQDVAKQSYDPDMKVNGFENYI 540
PDFMEKPDKP+Y S NVIGKLFREVKDIAP T SI + T DVA+Q YDPDM+V+GFE+YI
Sbjct: 924 PDFMEKPDKPSYESRNVIGKLFREVKDIAPRTSSIRSFTSDVARQCYDPDMEVDGFEDYI 983
Query: 541 DDAFYHKSNYDYKLGNLLDYYGIKSEAEILSGNIMKMSKSFNRRRDTEAIVMAVR 705
DDAFY+KSNYDYKLGNL++YYGIK+EAE+LSG+ MKMSKSF ++RD EAI MAVR
Sbjct: 984 DDAFYYKSNYDYKLGNLMEYYGIKTEAELLSGSFMKMSKSFTKKRDAEAIGMAVR 1038
>gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]
Length = 1133
Score = 377 bits (969), Expect = e-102
Identities = 181/235 (77%), Positives = 204/235 (86%)
Frame = +1
Query: 1 RPHPNECSGSDLDGDIYFVCWDPELIPPSQTKPMDYTPAPSVQLDHDVTIEEVEEYFANY 180
RPHPNECSGSDLDGDIYFVCWD ELIP Q +PMDY+PAP+ +LDHDV IEEV+EYF NY
Sbjct: 805 RPHPNECSGSDLDGDIYFVCWDDELIPQKQFEPMDYSPAPTTRLDHDVRIEEVQEYFTNY 864
Query: 181 IGNDSLGIIANAHTVFADKEPKKAKSKPCLKLARLFSIAVDSPKTGEPAEIPPYLFVKEY 360
I NDSLGIIANAHT FADKEP KA S C++LARLFSIAVD PKTG PA IP L+VKEY
Sbjct: 865 IVNDSLGIIANAHTAFADKEPSKAMSPSCIELARLFSIAVDFPKTGVPAVIPQELYVKEY 924
Query: 361 PDFMEKPDKPTYVSPNVIGKLFREVKDIAPHTGSIGTVTQDVAKQSYDPDMKVNGFENYI 540
PDFMEK +KPTY S NVIGKLFREVKDIAP+ GS+ T++VA +SYDPDM+ +GFE+YI
Sbjct: 925 PDFMEKLNKPTYESQNVIGKLFREVKDIAPNVGSLHFFTKEVASRSYDPDMEYDGFEDYI 984
Query: 541 DDAFYHKSNYDYKLGNLLDYYGIKSEAEILSGNIMKMSKSFNRRRDTEAIVMAVR 705
DDAFY+KSNYDYKLGNLLDYYGIKSEAEI+ G+IM+MSKSF +RRD E+I MAVR
Sbjct: 985 DDAFYYKSNYDYKLGNLLDYYGIKSEAEIIGGSIMRMSKSFTKRRDAESINMAVR 1039
>ref|XP_007225261.1| hypothetical protein PRUPE_ppa001524mg [Prunus persica]
gi|462422197|gb|EMJ26460.1| hypothetical protein
PRUPE_ppa001524mg [Prunus persica]
Length = 808
Score = 374 bits (960), Expect = e-101
Identities = 178/235 (75%), Positives = 206/235 (87%)
Frame = +1
Query: 1 RPHPNECSGSDLDGDIYFVCWDPELIPPSQTKPMDYTPAPSVQLDHDVTIEEVEEYFANY 180
RPHPNECSGSDLDGDIYFVCWD ELIP Q +PMDYTPAP++ LDH VTIEEVEEYF NY
Sbjct: 480 RPHPNECSGSDLDGDIYFVCWDDELIPSRQIQPMDYTPAPTIALDHAVTIEEVEEYFVNY 539
Query: 181 IGNDSLGIIANAHTVFADKEPKKAKSKPCLKLARLFSIAVDSPKTGEPAEIPPYLFVKEY 360
+ NDSLGIIANAHT FAD++P KA SKPC++LA+LFSIAVD PKTG PA IP +L VKE+
Sbjct: 540 MVNDSLGIIANAHTAFADRQPSKAMSKPCIELAKLFSIAVDFPKTGVPAIIPQHLRVKEF 599
Query: 361 PDFMEKPDKPTYVSPNVIGKLFREVKDIAPHTGSIGTVTQDVAKQSYDPDMKVNGFENYI 540
PDFMEKPDKPTY S NVIG+LFREVKD+ PH GSI + +++VA+QSYD DM+V+GFE+YI
Sbjct: 600 PDFMEKPDKPTYQSCNVIGELFREVKDVEPHDGSIRSFSREVARQSYDRDMEVDGFEDYI 659
Query: 541 DDAFYHKSNYDYKLGNLLDYYGIKSEAEILSGNIMKMSKSFNRRRDTEAIVMAVR 705
+DAFY+KSNYD LGNLLDYYGIK+EAEILSG++MKMSKSF +RRD + I MAVR
Sbjct: 660 EDAFYYKSNYDSILGNLLDYYGIKTEAEILSGSVMKMSKSFTKRRDIDPINMAVR 714
>emb|CBI26820.3| unnamed protein product [Vitis vinifera]
Length = 919
Score = 374 bits (960), Expect = e-101
Identities = 181/235 (77%), Positives = 203/235 (86%)
Frame = +1
Query: 1 RPHPNECSGSDLDGDIYFVCWDPELIPPSQTKPMDYTPAPSVQLDHDVTIEEVEEYFANY 180
RPHPNECSGSDLDGDIYFVCWD +LIPP Q PMDYTPAP+ LDHDV IEEVEEYF NY
Sbjct: 592 RPHPNECSGSDLDGDIYFVCWDRDLIPPQQINPMDYTPAPTKVLDHDVMIEEVEEYFTNY 651
Query: 181 IGNDSLGIIANAHTVFADKEPKKAKSKPCLKLARLFSIAVDSPKTGEPAEIPPYLFVKEY 360
I NDSLGIIANAHTVFADKE KA PC +LA+LFSIAVD PKTG PAEIP L VKEY
Sbjct: 652 IVNDSLGIIANAHTVFADKEYDKAYCDPCTELAKLFSIAVDFPKTGVPAEIPRNLRVKEY 711
Query: 361 PDFMEKPDKPTYVSPNVIGKLFREVKDIAPHTGSIGTVTQDVAKQSYDPDMKVNGFENYI 540
PDFMEK DKPTY S +VIGKLFREVKDIAPH +I + T+DVA+QSYDPDM+V GFE+Y+
Sbjct: 712 PDFMEKADKPTYESQSVIGKLFREVKDIAPHNCNIRSFTRDVARQSYDPDMEVVGFEDYV 771
Query: 541 DDAFYHKSNYDYKLGNLLDYYGIKSEAEILSGNIMKMSKSFNRRRDTEAIVMAVR 705
DAFY+KS YDYKLGNL+DYYGIK+E+EILSG+IM+MSKSF+RR+D EAI +AV+
Sbjct: 772 SDAFYYKSEYDYKLGNLMDYYGIKTESEILSGSIMRMSKSFDRRKDAEAIGLAVK 826
>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
Length = 1121
Score = 374 bits (960), Expect = e-101
Identities = 181/235 (77%), Positives = 203/235 (86%)
Frame = +1
Query: 1 RPHPNECSGSDLDGDIYFVCWDPELIPPSQTKPMDYTPAPSVQLDHDVTIEEVEEYFANY 180
RPHPNECSGSDLDGDIYFVCWD +LIPP Q PMDYTPAP+ LDHDV IEEVEEYF NY
Sbjct: 794 RPHPNECSGSDLDGDIYFVCWDRDLIPPQQINPMDYTPAPTKVLDHDVMIEEVEEYFTNY 853
Query: 181 IGNDSLGIIANAHTVFADKEPKKAKSKPCLKLARLFSIAVDSPKTGEPAEIPPYLFVKEY 360
I NDSLGIIANAHTVFADKE KA PC +LA+LFSIAVD PKTG PAEIP L VKEY
Sbjct: 854 IVNDSLGIIANAHTVFADKEYDKAYCDPCTELAKLFSIAVDFPKTGVPAEIPRNLRVKEY 913
Query: 361 PDFMEKPDKPTYVSPNVIGKLFREVKDIAPHTGSIGTVTQDVAKQSYDPDMKVNGFENYI 540
PDFMEK DKPTY S +VIGKLFREVKDIAPH +I + T+DVA+QSYDPDM+V GFE+Y+
Sbjct: 914 PDFMEKADKPTYESQSVIGKLFREVKDIAPHNCNIRSFTRDVARQSYDPDMEVVGFEDYV 973
Query: 541 DDAFYHKSNYDYKLGNLLDYYGIKSEAEILSGNIMKMSKSFNRRRDTEAIVMAVR 705
DAFY+KS YDYKLGNL+DYYGIK+E+EILSG+IM+MSKSF+RR+D EAI +AV+
Sbjct: 974 SDAFYYKSEYDYKLGNLMDYYGIKTESEILSGSIMRMSKSFDRRKDAEAIGLAVK 1028
>ref|XP_006416969.1| hypothetical protein EUTSA_v10006629mg [Eutrema salsugineum]
gi|557094740|gb|ESQ35322.1| hypothetical protein
EUTSA_v10006629mg [Eutrema salsugineum]
Length = 1108
Score = 374 bits (959), Expect = e-101
Identities = 180/235 (76%), Positives = 200/235 (85%)
Frame = +1
Query: 1 RPHPNECSGSDLDGDIYFVCWDPELIPPSQTKPMDYTPAPSVQLDHDVTIEEVEEYFANY 180
RPHPNECSGSDLDGDIYFVCWDPELIPP ++PMDYTP P+ LDHDVTIEE+EEYF NY
Sbjct: 786 RPHPNECSGSDLDGDIYFVCWDPELIPPETSEPMDYTPEPAQILDHDVTIEEIEEYFTNY 845
Query: 181 IGNDSLGIIANAHTVFADKEPKKAKSKPCLKLARLFSIAVDSPKTGEPAEIPPYLFVKEY 360
I NDSLGIIANAHT FADKEP KA S PC++LAR FSIAVD PKTG AEIP +L+VKEY
Sbjct: 846 IVNDSLGIIANAHTAFADKEPLKAFSDPCIELARKFSIAVDFPKTGVAAEIPQHLYVKEY 905
Query: 361 PDFMEKPDKPTYVSPNVIGKLFREVKDIAPHTGSIGTVTQDVAKQSYDPDMKVNGFENYI 540
PDFMEKPDKPTY S NVIGKLFREVK+ AP SI + T DVA ++YD DM+V GFE YI
Sbjct: 906 PDFMEKPDKPTYESKNVIGKLFREVKERAPPLISIKSFTLDVASKTYDQDMEVYGFEEYI 965
Query: 541 DDAFYHKSNYDYKLGNLLDYYGIKSEAEILSGNIMKMSKSFNRRRDTEAIVMAVR 705
D+AFYHK NYDYKLGNL+DYYGIK+EAE+LSG IM+MSKSF +RRD E+I AVR
Sbjct: 966 DEAFYHKGNYDYKLGNLMDYYGIKTEAEVLSGGIMRMSKSFTKRRDGESIGRAVR 1020
>gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus guttatus]
Length = 1110
Score = 373 bits (957), Expect = e-101
Identities = 177/235 (75%), Positives = 204/235 (86%)
Frame = +1
Query: 1 RPHPNECSGSDLDGDIYFVCWDPELIPPSQTKPMDYTPAPSVQLDHDVTIEEVEEYFANY 180
RPHPNECSGSDLDGDIYFVCWD +LIP Q +PMDY PAP+ +LDHDVTIEEVE+YF NY
Sbjct: 790 RPHPNECSGSDLDGDIYFVCWDSDLIPTKQVEPMDYNPAPTTRLDHDVTIEEVEDYFTNY 849
Query: 181 IGNDSLGIIANAHTVFADKEPKKAKSKPCLKLARLFSIAVDSPKTGEPAEIPPYLFVKEY 360
I NDSLGIIANAHTVFADKEP A S+PCL+LARLFSIAVD KTG PAEIPP+L VKEY
Sbjct: 850 IVNDSLGIIANAHTVFADKEPLMALSEPCLELARLFSIAVDFNKTGIPAEIPPHLRVKEY 909
Query: 361 PDFMEKPDKPTYVSPNVIGKLFREVKDIAPHTGSIGTVTQDVAKQSYDPDMKVNGFENYI 540
PDFMEKPDK Y S VIGKLFREVKDIAP T S + T++VA++SYDPDM+V+GFE++I
Sbjct: 910 PDFMEKPDKINYASSRVIGKLFREVKDIAPQTSSFRSFTKEVARRSYDPDMEVDGFEDHI 969
Query: 541 DDAFYHKSNYDYKLGNLLDYYGIKSEAEILSGNIMKMSKSFNRRRDTEAIVMAVR 705
D+AF HK+ YDYKLGNL++YYG+K+EAE+LSG IMKMSK+F+RR+D EAI AVR
Sbjct: 970 DEAFLHKTEYDYKLGNLMEYYGVKTEAEVLSGGIMKMSKTFDRRKDAEAIGAAVR 1024
>ref|XP_004498237.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X2 [Cicer
arietinum]
Length = 1100
Score = 373 bits (957), Expect = e-101
Identities = 177/235 (75%), Positives = 202/235 (85%)
Frame = +1
Query: 1 RPHPNECSGSDLDGDIYFVCWDPELIPPSQTKPMDYTPAPSVQLDHDVTIEEVEEYFANY 180
RPHPNECSGSDLDGDIYFVCWDPELIPP T+PM+Y + L HDV IEEVEEYF NY
Sbjct: 774 RPHPNECSGSDLDGDIYFVCWDPELIPPETTEPMEYASVQPIVLYHDVEIEEVEEYFTNY 833
Query: 181 IGNDSLGIIANAHTVFADKEPKKAKSKPCLKLARLFSIAVDSPKTGEPAEIPPYLFVKEY 360
I NDSLGIIANAH VFADKEP KAK++PC++LA+LFSIAVD PKTG PA IPP+LF KEY
Sbjct: 834 ILNDSLGIIANAHIVFADKEPAKAKAEPCIELAKLFSIAVDFPKTGIPAVIPPHLFAKEY 893
Query: 361 PDFMEKPDKPTYVSPNVIGKLFREVKDIAPHTGSIGTVTQDVAKQSYDPDMKVNGFENYI 540
PDFMEKPDK TY S NVIGKLFRE++ I GSI + T +VAK+SYDPDM+ +GF +Y+
Sbjct: 894 PDFMEKPDKTTYKSNNVIGKLFREIQGIPSRDGSITSFTLEVAKKSYDPDMEFDGFMDYV 953
Query: 541 DDAFYHKSNYDYKLGNLLDYYGIKSEAEILSGNIMKMSKSFNRRRDTEAIVMAVR 705
DDAFYHK+NYDYKLGNL+DYYGIK+E+EILSGNIM+MSKSFN+RRD +AI MAVR
Sbjct: 954 DDAFYHKTNYDYKLGNLMDYYGIKNESEILSGNIMRMSKSFNKRRDGDAINMAVR 1008
>ref|XP_004498236.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Cicer
arietinum]
Length = 1126
Score = 373 bits (957), Expect = e-101
Identities = 177/235 (75%), Positives = 202/235 (85%)
Frame = +1
Query: 1 RPHPNECSGSDLDGDIYFVCWDPELIPPSQTKPMDYTPAPSVQLDHDVTIEEVEEYFANY 180
RPHPNECSGSDLDGDIYFVCWDPELIPP T+PM+Y + L HDV IEEVEEYF NY
Sbjct: 800 RPHPNECSGSDLDGDIYFVCWDPELIPPETTEPMEYASVQPIVLYHDVEIEEVEEYFTNY 859
Query: 181 IGNDSLGIIANAHTVFADKEPKKAKSKPCLKLARLFSIAVDSPKTGEPAEIPPYLFVKEY 360
I NDSLGIIANAH VFADKEP KAK++PC++LA+LFSIAVD PKTG PA IPP+LF KEY
Sbjct: 860 ILNDSLGIIANAHIVFADKEPAKAKAEPCIELAKLFSIAVDFPKTGIPAVIPPHLFAKEY 919
Query: 361 PDFMEKPDKPTYVSPNVIGKLFREVKDIAPHTGSIGTVTQDVAKQSYDPDMKVNGFENYI 540
PDFMEKPDK TY S NVIGKLFRE++ I GSI + T +VAK+SYDPDM+ +GF +Y+
Sbjct: 920 PDFMEKPDKTTYKSNNVIGKLFREIQGIPSRDGSITSFTLEVAKKSYDPDMEFDGFMDYV 979
Query: 541 DDAFYHKSNYDYKLGNLLDYYGIKSEAEILSGNIMKMSKSFNRRRDTEAIVMAVR 705
DDAFYHK+NYDYKLGNL+DYYGIK+E+EILSGNIM+MSKSFN+RRD +AI MAVR
Sbjct: 980 DDAFYHKTNYDYKLGNLMDYYGIKNESEILSGNIMRMSKSFNKRRDGDAINMAVR 1034
>ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
gi|590697846|ref|XP_007045553.1| RNA-dependent RNA
polymerase 1 isoform 1 [Theobroma cacao]
gi|590697850|ref|XP_007045554.1| RNA-dependent RNA
polymerase 1 isoform 1 [Theobroma cacao]
gi|508709487|gb|EOY01384.1| RNA-dependent RNA polymerase
1 isoform 1 [Theobroma cacao] gi|508709488|gb|EOY01385.1|
RNA-dependent RNA polymerase 1 isoform 1 [Theobroma
cacao] gi|508709489|gb|EOY01386.1| RNA-dependent RNA
polymerase 1 isoform 1 [Theobroma cacao]
Length = 1109
Score = 370 bits (950), Expect = e-100
Identities = 177/235 (75%), Positives = 204/235 (86%)
Frame = +1
Query: 1 RPHPNECSGSDLDGDIYFVCWDPELIPPSQTKPMDYTPAPSVQLDHDVTIEEVEEYFANY 180
RPHPNECSGSDLDGDIYFVCWDPELIP Q PMDY+PAP+ L+H+VTIEEVEEYF NY
Sbjct: 782 RPHPNECSGSDLDGDIYFVCWDPELIPSKQIPPMDYSPAPTKPLEHEVTIEEVEEYFTNY 841
Query: 181 IGNDSLGIIANAHTVFADKEPKKAKSKPCLKLARLFSIAVDSPKTGEPAEIPPYLFVKEY 360
I NDSLGIIANAHTVFAD+EP+KA S C LA+LFSIAVD PKTG PAEIP L VKEY
Sbjct: 842 IVNDSLGIIANAHTVFADREPRKAMSSECKWLAKLFSIAVDFPKTGVPAEIPQELRVKEY 901
Query: 361 PDFMEKPDKPTYVSPNVIGKLFREVKDIAPHTGSIGTVTQDVAKQSYDPDMKVNGFENYI 540
PDFMEKPDKPTY S NVIGKLFREVKD+AP+ I ++T++ ++ YDPDM+V+G+E+Y+
Sbjct: 902 PDFMEKPDKPTYQSYNVIGKLFREVKDLAPNECFIRSLTRERLERFYDPDMEVDGYEDYV 961
Query: 541 DDAFYHKSNYDYKLGNLLDYYGIKSEAEILSGNIMKMSKSFNRRRDTEAIVMAVR 705
DDAFYHKSNYDYKLGNL++YYGIK+EAEILSG IMKMS+SF ++RD EAI +AVR
Sbjct: 962 DDAFYHKSNYDYKLGNLMEYYGIKTEAEILSGGIMKMSRSFTKQRDAEAIGVAVR 1016
>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
Length = 1110
Score = 370 bits (950), Expect = e-100
Identities = 174/235 (74%), Positives = 203/235 (86%)
Frame = +1
Query: 1 RPHPNECSGSDLDGDIYFVCWDPELIPPSQTKPMDYTPAPSVQLDHDVTIEEVEEYFANY 180
RPHPNECSGSDLDGD+YFVCWDPELIP Q PMDY+PA + +LDH+VTIEE+EEYF NY
Sbjct: 782 RPHPNECSGSDLDGDVYFVCWDPELIPYKQIDPMDYSPASTTKLDHEVTIEEIEEYFTNY 841
Query: 181 IGNDSLGIIANAHTVFADKEPKKAKSKPCLKLARLFSIAVDSPKTGEPAEIPPYLFVKEY 360
I NDSLGII+NAHT FAD+EP KA S+PCL+LA+LFSIAVD PKTG PAEIP L VKEY
Sbjct: 842 IVNDSLGIISNAHTAFADREPDKAMSRPCLELAKLFSIAVDFPKTGVPAEIPQELRVKEY 901
Query: 361 PDFMEKPDKPTYVSPNVIGKLFREVKDIAPHTGSIGTVTQDVAKQSYDPDMKVNGFENYI 540
PDFMEKPDKP+Y S NVIGKLFREVK++AP+ SI +T++ ++ YDPDM+V GFE+YI
Sbjct: 902 PDFMEKPDKPSYQSHNVIGKLFREVKNLAPNECSIKFLTREKMQRFYDPDMEVEGFEDYI 961
Query: 541 DDAFYHKSNYDYKLGNLLDYYGIKSEAEILSGNIMKMSKSFNRRRDTEAIVMAVR 705
DDAF+HKS YDYKLGNL+DYYG+K+EAEIL G IMKMS+SF ++RD EAI MAVR
Sbjct: 962 DDAFFHKSKYDYKLGNLMDYYGVKTEAEILGGGIMKMSRSFTKKRDAEAISMAVR 1016
>ref|XP_006306626.1| hypothetical protein CARUB_v10008144mg [Capsella rubella]
gi|482575337|gb|EOA39524.1| hypothetical protein
CARUB_v10008144mg [Capsella rubella]
Length = 1107
Score = 369 bits (948), Expect = e-100
Identities = 179/235 (76%), Positives = 200/235 (85%)
Frame = +1
Query: 1 RPHPNECSGSDLDGDIYFVCWDPELIPPSQTKPMDYTPAPSVQLDHDVTIEEVEEYFANY 180
RPHPNECSGSDLDGDIYF+CWD ELIPP ++PMDYTP P+ LDHDVTIEEVEEYFANY
Sbjct: 787 RPHPNECSGSDLDGDIYFICWDHELIPPRTSEPMDYTPEPAQILDHDVTIEEVEEYFANY 846
Query: 181 IGNDSLGIIANAHTVFADKEPKKAKSKPCLKLARLFSIAVDSPKTGEPAEIPPYLFVKEY 360
I NDSLGIIANAHT FADKEP KA S PC++LAR FSIAVD PKTG AEIP +L+VKEY
Sbjct: 847 IVNDSLGIIANAHTAFADKEPLKAFSDPCIELARKFSIAVDFPKTGIAAEIPQHLYVKEY 906
Query: 361 PDFMEKPDKPTYVSPNVIGKLFREVKDIAPHTGSIGTVTQDVAKQSYDPDMKVNGFENYI 540
PDFM+KPDKPTY S NVIGKLFREVK+ AP SI + T DVA +SYD DM+V GFE YI
Sbjct: 907 PDFMDKPDKPTYESKNVIGKLFREVKERAPPLISIRSFTLDVALKSYDKDMEVEGFEEYI 966
Query: 541 DDAFYHKSNYDYKLGNLLDYYGIKSEAEILSGNIMKMSKSFNRRRDTEAIVMAVR 705
D+AF+HK NYDY+LGNL+DYYGIK+EAEILSG IM+MSKSF +RRD E+I AVR
Sbjct: 967 DEAFFHKGNYDYRLGNLMDYYGIKTEAEILSGGIMRMSKSFTKRRDAESIGRAVR 1021
>ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Glycine
max] gi|571439308|ref|XP_006574822.1| PREDICTED:
RNA-dependent RNA polymerase 1-like isoform X2 [Glycine
max] gi|571439310|ref|XP_006574823.1| PREDICTED:
RNA-dependent RNA polymerase 1-like isoform X3 [Glycine
max]
Length = 1125
Score = 369 bits (948), Expect = e-100
Identities = 182/235 (77%), Positives = 199/235 (84%)
Frame = +1
Query: 1 RPHPNECSGSDLDGDIYFVCWDPELIPPSQTKPMDYTPAPSVQLDHDVTIEEVEEYFANY 180
RPHPNECSGSDLDGDIYFVCWD ELIP PMDYT +V+LDHDV IEEVEEYFANY
Sbjct: 801 RPHPNECSGSDLDGDIYFVCWDHELIPSRPIDPMDYTAPATVELDHDVMIEEVEEYFANY 860
Query: 181 IGNDSLGIIANAHTVFADKEPKKAKSKPCLKLARLFSIAVDSPKTGEPAEIPPYLFVKEY 360
I NDSLGIIANAHTVFADKE KA S C+KLARLFS AVD PKTG PA IPP L VKEY
Sbjct: 861 IVNDSLGIIANAHTVFADKEHLKAMSDQCVKLARLFSTAVDFPKTGVPAVIPPELHVKEY 920
Query: 361 PDFMEKPDKPTYVSPNVIGKLFREVKDIAPHTGSIGTVTQDVAKQSYDPDMKVNGFENYI 540
PDFMEKPDKPTY S NVIGKLFREVK+I+ GSI + T+ VA+ SYD +M+V+GF +Y+
Sbjct: 921 PDFMEKPDKPTYKSHNVIGKLFREVKEISTSAGSITSFTKLVARDSYDHEMEVDGFMDYV 980
Query: 541 DDAFYHKSNYDYKLGNLLDYYGIKSEAEILSGNIMKMSKSFNRRRDTEAIVMAVR 705
DDAFYHK+NYDYKLGNL+DYYGIK+EAEIL GNIMKMSKSFN+RRD EAI MAVR
Sbjct: 981 DDAFYHKTNYDYKLGNLMDYYGIKTEAEILGGNIMKMSKSFNKRRDAEAINMAVR 1035
>gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa]
gi|209420668|gb|ACI46982.1| RNA-dependent RNA polymerase
[Nicotiana glutinosa]
Length = 1117
Score = 369 bits (947), Expect = e-100
Identities = 178/235 (75%), Positives = 198/235 (84%)
Frame = +1
Query: 1 RPHPNECSGSDLDGDIYFVCWDPELIPPSQTKPMDYTPAPSVQLDHDVTIEEVEEYFANY 180
RPHPNECSGSDLDGDIYFVCWDP+L+PP Q +PMDYTPAPS QLDHDVTIEEVEEYF NY
Sbjct: 794 RPHPNECSGSDLDGDIYFVCWDPDLVPPRQFQPMDYTPAPSTQLDHDVTIEEVEEYFTNY 853
Query: 181 IGNDSLGIIANAHTVFADKEPKKAKSKPCLKLARLFSIAVDSPKTGEPAEIPPYLFVKEY 360
I NDSLGIIANAH VFAD+EP A S PC +LA+LFSIAVD PKTG PAEIP L KEY
Sbjct: 854 IVNDSLGIIANAHVVFADREPDMAMSDPCKQLAQLFSIAVDFPKTGVPAEIPSQLRPKEY 913
Query: 361 PDFMEKPDKPTYVSPNVIGKLFREVKDIAPHTGSIGTVTQDVAKQSYDPDMKVNGFENYI 540
PDFMEKPDKPTY S VIGKLF++VKD P SI T DVA++SYD DM VNGFE+YI
Sbjct: 914 PDFMEKPDKPTYHSEKVIGKLFQKVKDKTPQASSIANFTMDVARKSYDGDMIVNGFEDYI 973
Query: 541 DDAFYHKSNYDYKLGNLLDYYGIKSEAEILSGNIMKMSKSFNRRRDTEAIVMAVR 705
D+AFY+KS YD KLGNL+DYYGIK+EAEILSG IMK SK+F+RR+D +AI +AVR
Sbjct: 974 DEAFYYKSEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTFDRRKDADAIGVAVR 1028
>ref|XP_002892830.1| RNA-dependent RNA polymerase 1 [Arabidopsis lyrata subsp. lyrata]
gi|297338672|gb|EFH69089.1| RNA-dependent RNA polymerase
1 [Arabidopsis lyrata subsp. lyrata]
Length = 1107
Score = 369 bits (946), Expect = e-100
Identities = 178/235 (75%), Positives = 202/235 (85%)
Frame = +1
Query: 1 RPHPNECSGSDLDGDIYFVCWDPELIPPSQTKPMDYTPAPSVQLDHDVTIEEVEEYFANY 180
RPHPNECSGSDLDGDIYFVCWD ELIPP ++PMDYTP P+ LDHDVTIEEVEEYFANY
Sbjct: 788 RPHPNECSGSDLDGDIYFVCWDQELIPPRTSEPMDYTPEPAQILDHDVTIEEVEEYFANY 847
Query: 181 IGNDSLGIIANAHTVFADKEPKKAKSKPCLKLARLFSIAVDSPKTGEPAEIPPYLFVKEY 360
I NDSLGIIANAHT FADKEP KA S PC++LAR FS+AVD PKTG AEIP +L+VKEY
Sbjct: 848 IVNDSLGIIANAHTAFADKEPLKAFSDPCIELARKFSVAVDFPKTGVAAEIPQHLYVKEY 907
Query: 361 PDFMEKPDKPTYVSPNVIGKLFREVKDIAPHTGSIGTVTQDVAKQSYDPDMKVNGFENYI 540
PDFMEKPDKPTY S NVIGKLFREVK+ AP SI + T DVA +SYD DM+V+GFE Y+
Sbjct: 908 PDFMEKPDKPTYESKNVIGKLFREVKERAPPLISIKSFTLDVALKSYDKDMEVDGFEEYV 967
Query: 541 DDAFYHKSNYDYKLGNLLDYYGIKSEAEILSGNIMKMSKSFNRRRDTEAIVMAVR 705
D+AF++K+NYD+KLGNL+DYYGIK+EAEILSG IM+MSKSF +RRD E+I AVR
Sbjct: 968 DEAFHYKANYDFKLGNLMDYYGIKTEAEILSGGIMRMSKSFTKRRDAESIGRAVR 1022
>emb|CCD74482.1| RNA-dependent RNA polymerase 1 [Arabidopsis halleri subsp. halleri]
Length = 1107
Score = 367 bits (942), Expect = 2e-99
Identities = 178/235 (75%), Positives = 201/235 (85%)
Frame = +1
Query: 1 RPHPNECSGSDLDGDIYFVCWDPELIPPSQTKPMDYTPAPSVQLDHDVTIEEVEEYFANY 180
RPHPNECSGSDLDGDIYFVCWD ELIPP ++PMDYTP P+ LDHDVTIEEVEEYFANY
Sbjct: 788 RPHPNECSGSDLDGDIYFVCWDQELIPPRTSEPMDYTPEPAQILDHDVTIEEVEEYFANY 847
Query: 181 IGNDSLGIIANAHTVFADKEPKKAKSKPCLKLARLFSIAVDSPKTGEPAEIPPYLFVKEY 360
I NDSLGIIANAHT FADKEP KA S PC++LAR FS+AVD PKTG AEIP +L VKEY
Sbjct: 848 IVNDSLGIIANAHTAFADKEPLKAFSDPCIELARKFSVAVDFPKTGVAAEIPQHLHVKEY 907
Query: 361 PDFMEKPDKPTYVSPNVIGKLFREVKDIAPHTGSIGTVTQDVAKQSYDPDMKVNGFENYI 540
PDFMEKPDKPTY S NVIGKLFREVK+ AP SI + T DVA +SYD DM+V+GFE Y+
Sbjct: 908 PDFMEKPDKPTYESKNVIGKLFREVKERAPPLISIKSFTLDVALKSYDKDMEVDGFEEYV 967
Query: 541 DDAFYHKSNYDYKLGNLLDYYGIKSEAEILSGNIMKMSKSFNRRRDTEAIVMAVR 705
D+AF++K+NYD+KLGNL+DYYGIK+EAEILSG IM+MSKSF +RRD E+I AVR
Sbjct: 968 DEAFHYKANYDFKLGNLMDYYGIKTEAEILSGGIMRMSKSFTKRRDAESIGRAVR 1022
>ref|XP_002870481.1| RNA-dependent RNA polymerase 1 [Arabidopsis lyrata subsp. lyrata]
gi|297316317|gb|EFH46740.1| RNA-dependent RNA polymerase
1 [Arabidopsis lyrata subsp. lyrata]
Length = 1097
Score = 367 bits (942), Expect = 2e-99
Identities = 178/235 (75%), Positives = 201/235 (85%)
Frame = +1
Query: 1 RPHPNECSGSDLDGDIYFVCWDPELIPPSQTKPMDYTPAPSVQLDHDVTIEEVEEYFANY 180
RPHPNECSGSDLDGDIYFVCWD ELIPP ++PMDYTP P+ LDHDVTIEEVEEYFANY
Sbjct: 778 RPHPNECSGSDLDGDIYFVCWDQELIPPRTSEPMDYTPEPAQILDHDVTIEEVEEYFANY 837
Query: 181 IGNDSLGIIANAHTVFADKEPKKAKSKPCLKLARLFSIAVDSPKTGEPAEIPPYLFVKEY 360
I NDSLGIIANAHT FADKEP KA S PC++LAR FS+AVD PKTG AEIP +L VKEY
Sbjct: 838 IVNDSLGIIANAHTAFADKEPLKAFSDPCIELARKFSVAVDFPKTGVAAEIPQHLHVKEY 897
Query: 361 PDFMEKPDKPTYVSPNVIGKLFREVKDIAPHTGSIGTVTQDVAKQSYDPDMKVNGFENYI 540
PDFMEKPDKPTY S NVIGKLFREVK+ AP SI + T DVA +SYD DM+V+GFE Y+
Sbjct: 898 PDFMEKPDKPTYESKNVIGKLFREVKERAPPLISIKSFTLDVALKSYDKDMEVDGFEEYV 957
Query: 541 DDAFYHKSNYDYKLGNLLDYYGIKSEAEILSGNIMKMSKSFNRRRDTEAIVMAVR 705
D+AF++K+NYD+KLGNL+DYYGIK+EAEILSG IM+MSKSF +RRD E+I AVR
Sbjct: 958 DEAFHYKANYDFKLGNLMDYYGIKTEAEILSGGIMRMSKSFTKRRDAESIGRAVR 1012
>emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]
Length = 1116
Score = 366 bits (939), Expect = 5e-99
Identities = 177/235 (75%), Positives = 199/235 (84%)
Frame = +1
Query: 1 RPHPNECSGSDLDGDIYFVCWDPELIPPSQTKPMDYTPAPSVQLDHDVTIEEVEEYFANY 180
RPHPNECSGSDLDGDIYFVCWDP+LIPP Q + MDYTPAP+ QLDHDVTIEEVEEYF NY
Sbjct: 793 RPHPNECSGSDLDGDIYFVCWDPDLIPPRQVQSMDYTPAPTTQLDHDVTIEEVEEYFTNY 852
Query: 181 IGNDSLGIIANAHTVFADKEPKKAKSKPCLKLARLFSIAVDSPKTGEPAEIPPYLFVKEY 360
I NDSLGIIANAH VFAD+EP A S PC +LA+LFSIAVD PKTG PAEIP L KEY
Sbjct: 853 IINDSLGIIANAHVVFADREPDMAMSDPCKQLAQLFSIAVDFPKTGVPAEIPSQLRPKEY 912
Query: 361 PDFMEKPDKPTYVSPNVIGKLFREVKDIAPHTGSIGTVTQDVAKQSYDPDMKVNGFENYI 540
PDFMEKPDKPTY S VIGKLF++VK+ P SI T T+DVA++SYD DM V+GFE+YI
Sbjct: 913 PDFMEKPDKPTYPSEKVIGKLFQKVKNKTPQASSIATFTRDVARKSYDSDMIVDGFEDYI 972
Query: 541 DDAFYHKSNYDYKLGNLLDYYGIKSEAEILSGNIMKMSKSFNRRRDTEAIVMAVR 705
D+AFY+KS YD KLGNL+DYYGIK+EAEILSG IMK SK+F+RR+D EAI +AVR
Sbjct: 973 DEAFYYKSEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTFDRRKDAEAIGVAVR 1027