BLASTX nr result
ID: Paeonia22_contig00048099
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia22_contig00048099
(231 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa] 73 3e-15
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group] 64 2e-12
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group] 64 2e-12
emb|CAD40121.3| OSJNBa0061C06.5 [Oryza sativa Japonica Group] 63 4e-12
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 62 8e-12
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 62 8e-12
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 62 8e-12
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group] 62 1e-11
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 61 2e-11
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc... 60 4e-11
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 60 5e-11
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 58 5e-11
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 58 5e-11
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 57 9e-11
emb|CAN81335.1| hypothetical protein VITISV_006230 [Vitis vinifera] 56 1e-10
gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-... 58 2e-10
emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group] 60 2e-10
gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Ar... 60 4e-10
gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi] 59 4e-10
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera] 62 5e-10
>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
Length = 1297
Score = 73.2 bits (178), Expect(2) = 3e-15
Identities = 32/51 (62%), Positives = 43/51 (84%)
Frame = +3
Query: 72 MIRCDS*SSIYIAKNQVFHERMKHIEVRYHRIRGSLDSGDIAVEKVHTDNN 224
+++CDS S+I++AKNQVFH R KHI+ RYHRIR +++G I VEKVHTD+N
Sbjct: 1226 VVKCDSQSAIHLAKNQVFHARTKHIDARYHRIRDWVEAGVIIVEKVHTDDN 1276
Score = 33.9 bits (76), Expect(2) = 3e-15
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 5 YVFTCGGCQINWRAMLQSVCA 67
YVFTCGG ++W+A LQ+V A
Sbjct: 1170 YVFTCGGGPVSWKATLQAVTA 1190
>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
Length = 944
Score = 64.3 bits (155), Expect(2) = 2e-12
Identities = 30/59 (50%), Positives = 41/59 (69%)
Frame = +3
Query: 48 CFNLFVLGMIRCDS*SSIYIAKNQVFHERMKHIEVRYHRIRGSLDSGDIAVEKVHTDNN 224
C N+F CDS S+IY+ ++Q+FHER KHI+VRYH IRG + GD+ V K+ T +N
Sbjct: 867 CINIF------CDSQSAIYLTEDQMFHERTKHIDVRYHFIRGVIAEGDVKVCKISTHDN 919
Score = 33.1 bits (74), Expect(2) = 2e-12
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 5 YVFTCGGCQINWRAMLQSVCA 67
YVFT GGC ++W+A LQ+ A
Sbjct: 813 YVFTIGGCAVSWKASLQATVA 833
>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]
Length = 944
Score = 64.3 bits (155), Expect(2) = 2e-12
Identities = 30/59 (50%), Positives = 41/59 (69%)
Frame = +3
Query: 48 CFNLFVLGMIRCDS*SSIYIAKNQVFHERMKHIEVRYHRIRGSLDSGDIAVEKVHTDNN 224
C N+F CDS S+IY+ ++Q+FHER KHI+VRYH IRG + GD+ V K+ T +N
Sbjct: 867 CINIF------CDSQSAIYLTEDQMFHERTKHIDVRYHFIRGVIAEGDVKVCKISTHDN 919
Score = 33.1 bits (74), Expect(2) = 2e-12
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 5 YVFTCGGCQINWRAMLQSVCA 67
YVFT GGC ++W+A LQ+ A
Sbjct: 813 YVFTIGGCAVSWKASLQATVA 833
>emb|CAD40121.3| OSJNBa0061C06.5 [Oryza sativa Japonica Group]
Length = 621
Score = 63.2 bits (152), Expect(2) = 4e-12
Identities = 30/59 (50%), Positives = 40/59 (67%)
Frame = +3
Query: 48 CFNLFVLGMIRCDS*SSIYIAKNQVFHERMKHIEVRYHRIRGSLDSGDIAVEKVHTDNN 224
C N+F CDS S+I + KNQ+FHER KHI++RYH IRG + GD+ V K+ T +N
Sbjct: 548 CINIF------CDSQSAICLTKNQMFHERTKHIDMRYHFIRGVIAEGDVKVCKISTHDN 600
Score = 33.5 bits (75), Expect(2) = 4e-12
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +2
Query: 2 AYVFTCGGCQINWRAMLQSVCA 67
+YVFT GGC ++W+A LQ+ A
Sbjct: 493 SYVFTIGGCAVSWKASLQATVA 514
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 62.0 bits (149), Expect(2) = 8e-12
Identities = 30/59 (50%), Positives = 40/59 (67%)
Frame = +3
Query: 48 CFNLFVLGMIRCDS*SSIYIAKNQVFHERMKHIEVRYHRIRGSLDSGDIAVEKVHTDNN 224
C N+F CDS S+I + K+Q+FHER KHI+VRYH IRG + GD+ V K+ T +N
Sbjct: 1235 CINIF------CDSQSAICLTKDQMFHERTKHIDVRYHIIRGVIVEGDVKVCKISTHDN 1287
Score = 33.5 bits (75), Expect(2) = 8e-12
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 5 YVFTCGGCQINWRAMLQSVCA 67
YVFT GGC ++W+A LQ+ A
Sbjct: 1181 YVFTIGGCDVSWKASLQATVA 1201
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 62.0 bits (149), Expect(2) = 8e-12
Identities = 30/59 (50%), Positives = 40/59 (67%)
Frame = +3
Query: 48 CFNLFVLGMIRCDS*SSIYIAKNQVFHERMKHIEVRYHRIRGSLDSGDIAVEKVHTDNN 224
C N+F CDS S+I + K+Q+FHER KHI+VRYH IRG + GD+ V K+ T +N
Sbjct: 1203 CINIF------CDSQSAICLTKDQMFHERTKHIDVRYHIIRGVIVEGDVKVCKISTHDN 1255
Score = 33.5 bits (75), Expect(2) = 8e-12
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 5 YVFTCGGCQINWRAMLQSVCA 67
YVFT GGC ++W+A LQ+ A
Sbjct: 1149 YVFTIGGCDVSWKASLQATVA 1169
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 62.4 bits (150), Expect(2) = 8e-12
Identities = 30/59 (50%), Positives = 40/59 (67%)
Frame = +3
Query: 48 CFNLFVLGMIRCDS*SSIYIAKNQVFHERMKHIEVRYHRIRGSLDSGDIAVEKVHTDNN 224
C N+F CDS S+I + K+Q+FHER KHI+VRYH IRG + GD+ V K+ T +N
Sbjct: 1104 CINIF------CDSQSAICLTKDQMFHERTKHIDVRYHFIRGVIAEGDVKVCKISTHDN 1156
Score = 33.1 bits (74), Expect(2) = 8e-12
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 5 YVFTCGGCQINWRAMLQSVCA 67
YVFT GGC ++W+A LQ+ A
Sbjct: 1050 YVFTIGGCAVSWKASLQATVA 1070
>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1211
Score = 61.6 bits (148), Expect(2) = 1e-11
Identities = 30/59 (50%), Positives = 39/59 (66%)
Frame = +3
Query: 48 CFNLFVLGMIRCDS*SSIYIAKNQVFHERMKHIEVRYHRIRGSLDSGDIAVEKVHTDNN 224
C N+F CDS S+I K+Q+FHER KHI+VRYH IRG + GD+ V K+ T +N
Sbjct: 1134 CINIF------CDSQSAICFTKDQMFHERTKHIDVRYHFIRGVIAEGDVKVCKISTHDN 1186
Score = 33.1 bits (74), Expect(2) = 1e-11
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 5 YVFTCGGCQINWRAMLQSVCA 67
YVFT GGC ++W+A LQ+ A
Sbjct: 1080 YVFTIGGCAVSWKASLQATVA 1100
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 61.2 bits (147), Expect(2) = 2e-11
Identities = 29/59 (49%), Positives = 40/59 (67%)
Frame = +3
Query: 48 CFNLFVLGMIRCDS*SSIYIAKNQVFHERMKHIEVRYHRIRGSLDSGDIAVEKVHTDNN 224
C N+F CDS S+I + K+Q+FHER KHI++RYH IRG + GD+ V K+ T +N
Sbjct: 1164 CINIF------CDSQSAICLTKDQMFHERTKHIDLRYHFIRGVIAEGDVKVCKISTHDN 1216
Score = 33.1 bits (74), Expect(2) = 2e-11
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 5 YVFTCGGCQINWRAMLQSVCA 67
YVFT GGC ++W+A LQ+ A
Sbjct: 1110 YVFTVGGCAVSWKASLQATVA 1130
>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1138
Score = 60.5 bits (145), Expect(2) = 4e-11
Identities = 29/59 (49%), Positives = 39/59 (66%)
Frame = +3
Query: 48 CFNLFVLGMIRCDS*SSIYIAKNQVFHERMKHIEVRYHRIRGSLDSGDIAVEKVHTDNN 224
C N+F CDS S+I + K+Q+FHER KHI+VRYH IR + GD+ V K+ T +N
Sbjct: 1061 CINIF------CDSQSAICLTKDQMFHERTKHIDVRYHFIRSVITEGDVKVCKISTHDN 1113
Score = 32.7 bits (73), Expect(2) = 4e-11
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 5 YVFTCGGCQINWRAMLQSVCA 67
YVFT GGC ++W+A LQ+ A
Sbjct: 1007 YVFTIGGCAVSWKANLQATVA 1027
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 59.7 bits (143), Expect(2) = 5e-11
Identities = 28/59 (47%), Positives = 39/59 (66%)
Frame = +3
Query: 48 CFNLFVLGMIRCDS*SSIYIAKNQVFHERMKHIEVRYHRIRGSLDSGDIAVEKVHTDNN 224
C N+F CDS S+I + K+Q+FHER KHI+VRYH IRG + GD+ + K+ +N
Sbjct: 1462 CINIF------CDSQSAICLTKDQMFHERTKHIDVRYHFIRGLIAEGDVKICKISIHDN 1514
Score = 33.1 bits (74), Expect(2) = 5e-11
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 5 YVFTCGGCQINWRAMLQSVCA 67
YVFT GGC ++W+A LQ+ A
Sbjct: 1408 YVFTIGGCAVSWKASLQATVA 1428
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 58.2 bits (139), Expect(2) = 5e-11
Identities = 23/50 (46%), Positives = 37/50 (74%)
Frame = +3
Query: 75 IRCDS*SSIYIAKNQVFHERMKHIEVRYHRIRGSLDSGDIAVEKVHTDNN 224
+ CDS S+IY+ K+Q+FHER KHI+++YH +R ++ G + V K+ T +N
Sbjct: 1259 LHCDSQSAIYLTKDQMFHERTKHIDIKYHFVRDVIEEGKLKVCKISTHDN 1308
Score = 34.7 bits (78), Expect(2) = 5e-11
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +2
Query: 5 YVFTCGGCQINWRAMLQSVCA 67
YVFT G C ++WRA LQSV A
Sbjct: 1202 YVFTIGSCAVSWRATLQSVVA 1222
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 58.2 bits (139), Expect(2) = 5e-11
Identities = 23/50 (46%), Positives = 37/50 (74%)
Frame = +3
Query: 75 IRCDS*SSIYIAKNQVFHERMKHIEVRYHRIRGSLDSGDIAVEKVHTDNN 224
+ CDS S+IY+ K+Q+FHER KHI+++YH +R ++ G + V K+ T +N
Sbjct: 1259 LHCDSQSAIYLTKDQMFHERTKHIDIKYHFVRDVIEEGKLKVCKISTHDN 1308
Score = 34.7 bits (78), Expect(2) = 5e-11
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +2
Query: 5 YVFTCGGCQINWRAMLQSVCA 67
YVFT G C ++WRA LQSV A
Sbjct: 1202 YVFTIGSCAVSWRATLQSVVA 1222
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
Length = 1335
Score = 57.4 bits (137), Expect(2) = 9e-11
Identities = 23/50 (46%), Positives = 37/50 (74%)
Frame = +3
Query: 75 IRCDS*SSIYIAKNQVFHERMKHIEVRYHRIRGSLDSGDIAVEKVHTDNN 224
+ CDS S+IY+ K+Q+FHER KHI+++YH +R ++ G + V K+ T +N
Sbjct: 1261 LHCDSQSAIYLTKDQMFHERTKHIDIKYHFVRDVIEEGKLKVCKICTHDN 1310
Score = 34.7 bits (78), Expect(2) = 9e-11
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +2
Query: 5 YVFTCGGCQINWRAMLQSVCA 67
YVFT G C ++WRA LQSV A
Sbjct: 1204 YVFTIGSCAVSWRATLQSVVA 1224
>emb|CAN81335.1| hypothetical protein VITISV_006230 [Vitis vinifera]
Length = 714
Score = 55.8 bits (133), Expect(2) = 1e-10
Identities = 26/48 (54%), Positives = 33/48 (68%)
Frame = +3
Query: 81 CDS*SSIYIAKNQVFHERMKHIEVRYHRIRGSLDSGDIAVEKVHTDNN 224
CDS S I++ K+Q+FHER KHI VRYH + + GDI V KV T +N
Sbjct: 642 CDSQSVIFLTKDQMFHERTKHINVRYHFVCDIIARGDIVVAKVSTHDN 689
Score = 35.4 bits (80), Expect(2) = 1e-10
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +2
Query: 5 YVFTCGGCQINWRAMLQSVCA 67
YVFT GGC INW+A LQ+ A
Sbjct: 598 YVFTIGGCAINWKATLQTTVA 618
>gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77549746|gb|ABA92543.1|
retrotransposon protein, putative, Ty1-copia subclass,
expressed [Oryza sativa Japonica Group]
Length = 1170
Score = 58.2 bits (139), Expect(2) = 2e-10
Identities = 27/59 (45%), Positives = 40/59 (67%)
Frame = +3
Query: 48 CFNLFVLGMIRCDS*SSIYIAKNQVFHERMKHIEVRYHRIRGSLDSGDIAVEKVHTDNN 224
C N+F C+S S+I + K+Q+FHER KHI++RYH IRG + G++ V K+ T +N
Sbjct: 1093 CINIF------CNSQSAICLTKDQMFHERTKHIDLRYHFIRGVITEGEVKVCKISTHDN 1145
Score = 32.7 bits (73), Expect(2) = 2e-10
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +2
Query: 5 YVFTCGGCQINWRAMLQSVCA 67
YVFT GGC ++W+ LQ++ A
Sbjct: 1039 YVFTIGGCAVSWKTSLQAIVA 1059
>emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group]
Length = 1009
Score = 60.5 bits (145), Expect(2) = 2e-10
Identities = 29/61 (47%), Positives = 41/61 (67%)
Frame = +3
Query: 48 CFNLFVLGMIRCDS*SSIYIAKNQVFHERMKHIEVRYHRIRGSLDSGDIAVEKVHTDNNI 227
C N+F C+S S I + K+Q+FHER KHI+VRYH IRG + GD+ V K+ T +N+
Sbjct: 932 CINIF------CNSHSVICLTKDQMFHERTKHIDVRYHFIRGVIAKGDVKVCKISTHDNL 985
Query: 228 S 230
+
Sbjct: 986 A 986
Score = 30.4 bits (67), Expect(2) = 2e-10
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 8 VFTCGGCQINWRAMLQSVCA 67
VFT GGC ++W+A LQ+ A
Sbjct: 879 VFTIGGCAVSWKASLQATVA 898
>gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Arabidopsis thaliana]
Length = 1356
Score = 60.5 bits (145), Expect(2) = 4e-10
Identities = 27/50 (54%), Positives = 38/50 (76%)
Frame = +3
Query: 75 IRCDS*SSIYIAKNQVFHERMKHIEVRYHRIRGSLDSGDIAVEKVHTDNN 224
I CDS S+I ++KN V+HER KHI+VR++ IR ++SGD+ V K+HT N
Sbjct: 1280 IWCDSQSAICLSKNSVYHERTKHIDVRFNYIRDVVESGDVDVLKIHTSRN 1329
Score = 29.3 bits (64), Expect(2) = 4e-10
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 5 YVFTCGGCQINWRAMLQSVCA 67
YVFT GG ++W+A LQ V A
Sbjct: 1223 YVFTIGGNTVSWKASLQPVVA 1243
>gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi]
Length = 297
Score = 58.9 bits (141), Expect(2) = 4e-10
Identities = 23/50 (46%), Positives = 38/50 (76%)
Frame = +3
Query: 81 CDS*SSIYIAKNQVFHERMKHIEVRYHRIRGSLDSGDIAVEKVHTDNNIS 230
CD+ S+I++AKNQ +H R KHI+V+YH +R ++ GD+ ++K+ T +N S
Sbjct: 223 CDNQSAIFLAKNQTYHARTKHIDVKYHYVREIIEGGDVLLKKIDTKDNPS 272
Score = 30.8 bits (68), Expect(2) = 4e-10
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 5 YVFTCGGCQINWRAMLQSVCA 67
YVFT GG ++WR++LQS A
Sbjct: 164 YVFTLGGGSVSWRSILQSTIA 184
>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
Length = 1208
Score = 62.0 bits (149), Expect(2) = 5e-10
Identities = 28/53 (52%), Positives = 40/53 (75%)
Frame = +3
Query: 72 MIRCDS*SSIYIAKNQVFHERMKHIEVRYHRIRGSLDSGDIAVEKVHTDNNIS 230
++ CD+ S+I++AKNQ FHER KHI+VR H +R + +G+I V KVHT +N S
Sbjct: 1132 VVYCDNQSAIHLAKNQSFHERSKHIDVRLHFVRDIIAAGEIGVGKVHTKDNPS 1184
Score = 27.3 bits (59), Expect(2) = 5e-10
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 5 YVFTCGGCQINWRAMLQSVCA 67
YVFT G ++W+A LQSV A
Sbjct: 1076 YVFTXFGGAVSWKANLQSVVA 1096