BLASTX nr result
ID: Paeonia22_contig00047234
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia22_contig00047234
(247 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_008081515.1| hypothetical chloroplast RF1 (chloroplast) [... 69 6e-18
gb|ADD30913.1| putative RF1 protein [Berberidopsis corallina] 66 1e-16
ref|YP_008963536.1| hypothetical chloroplast RF19 (chloroplast) ... 66 2e-16
ref|YP_002720024.1| Ycf1 [Nicotiana tabacum] 68 3e-16
ref|YP_358745.1| hypothetical protein NisyCp102 [Nicotiana sylve... 68 3e-16
ref|YP_004891674.1| ycf1 gene product (chloroplast) [Nicotiana u... 68 3e-16
ref|YP_398931.1| hypothetical protein NitoCp101 [Nicotiana tomen... 68 3e-16
gb|ADD30918.1| putative RF1 protein [Heuchera sanguinea] 66 3e-16
prf||1211235DC ORF 1244 68 3e-16
gb|ADD30903.1| putative RF1 protein [Aucuba japonica] 66 4e-16
ref|YP_008992954.1| hypothetical chloroplast RF19 (chloroplast) ... 65 5e-16
ref|YP_008992609.1| hypothetical chloroplast RF19 (chloroplast) ... 65 5e-16
ref|YP_006503654.1| hypothetical chloroplast RF1 (chloroplast) [... 65 5e-16
ref|YP_006303536.1| hypothetical chloroplast RF1 (chloroplast) [... 65 5e-16
ref|YP_005087738.1| hypothetical chloroplast RF1 (chloroplast) [... 65 5e-16
ref|YP_005088961.1| hypothetical chloroplast RF1 (chloroplast) [... 65 5e-16
ref|YP_005088421.1| hypothetical chloroplast RF1 (chloroplast) [... 65 5e-16
ref|YP_004286061.1| hypothetical chloroplast RF19 [Gossypium thu... 65 5e-16
ref|YP_008992781.1| hypothetical chloroplast RF19 (chloroplast) ... 65 5e-16
ref|YP_538982.1| hypothetical chloroplast RF1 [Gossypium hirsutu... 65 5e-16
>ref|YP_008081515.1| hypothetical chloroplast RF1 (chloroplast) [Trochodendron
aralioides] gi|290489080|gb|ADD30924.1| putative RF1
protein [Trochodendron aralioides]
gi|479279354|gb|AGJ72207.1| hypothetical chloroplast RF1
(chloroplast) [Trochodendron aralioides]
Length = 1896
Score = 69.3 bits (168), Expect(2) = 6e-18
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = -1
Query: 187 SETEFPKNWLKDGIQIKILFPFCLKPWHGS 98
SETEFPKNWL DGIQIKILFPFCLKPWHGS
Sbjct: 876 SETEFPKNWLTDGIQIKILFPFCLKPWHGS 905
Score = 47.0 bits (110), Expect(2) = 6e-18
Identities = 18/22 (81%), Positives = 22/22 (100%)
Frame = -3
Query: 68 EKKGQKADFCFLTIWGMEAKLP 3
+KKGQK+DFCFLT+WGMEA+LP
Sbjct: 916 KKKGQKSDFCFLTVWGMEAELP 937
>gb|ADD30913.1| putative RF1 protein [Berberidopsis corallina]
Length = 1909
Score = 66.2 bits (160), Expect(2) = 1e-16
Identities = 28/30 (93%), Positives = 28/30 (93%)
Frame = -1
Query: 187 SETEFPKNWLKDGIQIKILFPFCLKPWHGS 98
SETEFPKNWL DGIQIKILFPFCLKPWH S
Sbjct: 895 SETEFPKNWLTDGIQIKILFPFCLKPWHRS 924
Score = 45.8 bits (107), Expect(2) = 1e-16
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = -3
Query: 68 EKKGQKADFCFLTIWGMEAKLP 3
+KKGQK DFCFLT+WGMEA+LP
Sbjct: 935 KKKGQKNDFCFLTVWGMEAELP 956
>ref|YP_008963536.1| hypothetical chloroplast RF19 (chloroplast) [Penthorum chinense]
gi|403226837|gb|AFR25716.1| hypothetical chloroplast
RF19 (chloroplast) [Penthorum chinense]
Length = 1805
Score = 66.2 bits (160), Expect(2) = 2e-16
Identities = 28/30 (93%), Positives = 28/30 (93%)
Frame = -1
Query: 187 SETEFPKNWLKDGIQIKILFPFCLKPWHGS 98
SETEFPKNWL DGIQIKILFPFCLKPWH S
Sbjct: 830 SETEFPKNWLTDGIQIKILFPFCLKPWHRS 859
Score = 44.7 bits (104), Expect(2) = 2e-16
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -3
Query: 68 EKKGQKADFCFLTIWGMEAKLP 3
+KKGQK DFCFLT+WGME +LP
Sbjct: 870 KKKGQKEDFCFLTVWGMETELP 891
>ref|YP_002720024.1| Ycf1 [Nicotiana tabacum]
Length = 1902
Score = 67.8 bits (164), Expect(2) = 3e-16
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = -1
Query: 187 SETEFPKNWLKDGIQIKILFPFCLKPWH 104
SETEFPKNWLKDGIQIKILFPFCLKPWH
Sbjct: 899 SETEFPKNWLKDGIQIKILFPFCLKPWH 926
Score = 42.7 bits (99), Expect(2) = 3e-16
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -3
Query: 68 EKKGQKADFCFLTIWGMEAKLP 3
+KK QK DFCFLT+WGMEA+LP
Sbjct: 939 KKKKQKDDFCFLTVWGMEAELP 960
>ref|YP_358745.1| hypothetical protein NisyCp102 [Nicotiana sylvestris]
gi|231660|sp|P12222.2|YCF1_TOBAC RecName: Full=Putative
membrane protein ycf1; AltName: Full=ORF 1901
gi|118574758|sp|Q3C1P6.1|YCF1_NICSY RecName:
Full=Putative membrane protein ycf1
gi|76559647|emb|CAJ32485.1| hypothetical protein
[Nicotiana tabacum] gi|77799633|dbj|BAE46722.1|
hypothetical protein [Nicotiana sylvestris]
Length = 1901
Score = 67.8 bits (164), Expect(2) = 3e-16
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = -1
Query: 187 SETEFPKNWLKDGIQIKILFPFCLKPWH 104
SETEFPKNWLKDGIQIKILFPFCLKPWH
Sbjct: 898 SETEFPKNWLKDGIQIKILFPFCLKPWH 925
Score = 42.7 bits (99), Expect(2) = 3e-16
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -3
Query: 68 EKKGQKADFCFLTIWGMEAKLP 3
+KK QK DFCFLT+WGMEA+LP
Sbjct: 938 KKKKQKDDFCFLTVWGMEAELP 959
>ref|YP_004891674.1| ycf1 gene product (chloroplast) [Nicotiana undulata]
gi|347453974|gb|AEO95632.1| hypothetical chloroplast
RF19 (chloroplast) [Nicotiana undulata]
gi|347454084|gb|AEO95741.1| hypothetical chloroplast
RF19 [synthetic construct]
Length = 1901
Score = 67.8 bits (164), Expect(2) = 3e-16
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = -1
Query: 187 SETEFPKNWLKDGIQIKILFPFCLKPWH 104
SETEFPKNWLKDGIQIKILFPFCLKPWH
Sbjct: 898 SETEFPKNWLKDGIQIKILFPFCLKPWH 925
Score = 42.7 bits (99), Expect(2) = 3e-16
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -3
Query: 68 EKKGQKADFCFLTIWGMEAKLP 3
+KK QK DFCFLT+WGMEA+LP
Sbjct: 938 KKKKQKDDFCFLTVWGMEAELP 959
>ref|YP_398931.1| hypothetical protein NitoCp101 [Nicotiana tomentosiformis]
gi|118574759|sp|Q33BW4.1|YCF1_NICTO RecName:
Full=Putative membrane protein ycf1
gi|80750995|dbj|BAE48071.1| hypothetical protein
[Nicotiana tomentosiformis]
Length = 1892
Score = 67.8 bits (164), Expect(2) = 3e-16
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = -1
Query: 187 SETEFPKNWLKDGIQIKILFPFCLKPWH 104
SETEFPKNWLKDGIQIKILFPFCLKPWH
Sbjct: 895 SETEFPKNWLKDGIQIKILFPFCLKPWH 922
Score = 42.7 bits (99), Expect(2) = 3e-16
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -3
Query: 68 EKKGQKADFCFLTIWGMEAKLP 3
+KK QK DFCFLT+WGMEA+LP
Sbjct: 935 KKKKQKDDFCFLTVWGMEAELP 956
>gb|ADD30918.1| putative RF1 protein [Heuchera sanguinea]
Length = 1866
Score = 66.2 bits (160), Expect(2) = 3e-16
Identities = 28/30 (93%), Positives = 28/30 (93%)
Frame = -1
Query: 187 SETEFPKNWLKDGIQIKILFPFCLKPWHGS 98
SETEFPKNWL DGIQIKILFPFCLKPWH S
Sbjct: 890 SETEFPKNWLTDGIQIKILFPFCLKPWHRS 919
Score = 44.3 bits (103), Expect(2) = 3e-16
Identities = 17/22 (77%), Positives = 21/22 (95%)
Frame = -3
Query: 68 EKKGQKADFCFLTIWGMEAKLP 3
+KKG+K DFCFLT+WGMEA+LP
Sbjct: 930 KKKGKKDDFCFLTVWGMEAELP 951
>prf||1211235DC ORF 1244
Length = 1000
Score = 67.8 bits (164), Expect(2) = 3e-16
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = -1
Query: 187 SETEFPKNWLKDGIQIKILFPFCLKPWH 104
SETEFPKNWLKDGIQIKILFPFCLKPWH
Sbjct: 898 SETEFPKNWLKDGIQIKILFPFCLKPWH 925
Score = 42.7 bits (99), Expect(2) = 3e-16
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -3
Query: 68 EKKGQKADFCFLTIWGMEAKLP 3
+KK QK DFCFLT+WGMEA+LP
Sbjct: 938 KKKKQKDDFCFLTVWGMEAELP 959
>gb|ADD30903.1| putative RF1 protein [Aucuba japonica]
Length = 1890
Score = 66.2 bits (160), Expect(2) = 4e-16
Identities = 28/30 (93%), Positives = 28/30 (93%)
Frame = -1
Query: 187 SETEFPKNWLKDGIQIKILFPFCLKPWHGS 98
SETEFPKNWL DGIQIKILFPFCLKPWH S
Sbjct: 878 SETEFPKNWLTDGIQIKILFPFCLKPWHKS 907
Score = 43.9 bits (102), Expect(2) = 4e-16
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -3
Query: 68 EKKGQKADFCFLTIWGMEAKLP 3
+ KGQK DFCFLT+WGMEA+LP
Sbjct: 918 KNKGQKDDFCFLTVWGMEAELP 939
>ref|YP_008992954.1| hypothetical chloroplast RF19 (chloroplast) [Gossypium sturtianum]
gi|326457536|gb|ADZ74795.1| hypothetical chloroplast
RF19 [Gossypium sturtianum]
Length = 1894
Score = 65.5 bits (158), Expect(2) = 5e-16
Identities = 27/28 (96%), Positives = 27/28 (96%)
Frame = -1
Query: 187 SETEFPKNWLKDGIQIKILFPFCLKPWH 104
SETEFPKNWL DGIQIKILFPFCLKPWH
Sbjct: 867 SETEFPKNWLTDGIQIKILFPFCLKPWH 894
Score = 44.3 bits (103), Expect(2) = 5e-16
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -3
Query: 68 EKKGQKADFCFLTIWGMEAKLP 3
+KKGQK DFCFLT+WGME +LP
Sbjct: 908 KKKGQKNDFCFLTVWGMETELP 929
>ref|YP_008992609.1| hypothetical chloroplast RF19 (chloroplast) [Gossypium bickii]
gi|326457186|gb|ADZ74449.1| hypothetical chloroplast
RF19 [Gossypium bickii]
Length = 1894
Score = 65.5 bits (158), Expect(2) = 5e-16
Identities = 27/28 (96%), Positives = 27/28 (96%)
Frame = -1
Query: 187 SETEFPKNWLKDGIQIKILFPFCLKPWH 104
SETEFPKNWL DGIQIKILFPFCLKPWH
Sbjct: 867 SETEFPKNWLTDGIQIKILFPFCLKPWH 894
Score = 44.3 bits (103), Expect(2) = 5e-16
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -3
Query: 68 EKKGQKADFCFLTIWGMEAKLP 3
+KKGQK DFCFLT+WGME +LP
Sbjct: 908 KKKGQKNDFCFLTVWGMETELP 929
>ref|YP_006503654.1| hypothetical chloroplast RF1 (chloroplast) [Gossypium robinsonii]
gi|335354727|gb|AEH43343.1| hypothetical chloroplast RF1
[Gossypium robinsonii]
Length = 1894
Score = 65.5 bits (158), Expect(2) = 5e-16
Identities = 27/28 (96%), Positives = 27/28 (96%)
Frame = -1
Query: 187 SETEFPKNWLKDGIQIKILFPFCLKPWH 104
SETEFPKNWL DGIQIKILFPFCLKPWH
Sbjct: 867 SETEFPKNWLTDGIQIKILFPFCLKPWH 894
Score = 44.3 bits (103), Expect(2) = 5e-16
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -3
Query: 68 EKKGQKADFCFLTIWGMEAKLP 3
+KKGQK DFCFLT+WGME +LP
Sbjct: 908 KKKGQKNDFCFLTVWGMETELP 929
>ref|YP_006303536.1| hypothetical chloroplast RF1 (chloroplast) [Gossypium gossypioides]
gi|329317131|gb|AEB90490.1| hypothetical chloroplast RF1
(chloroplast) [Gossypium gossypioides]
Length = 1894
Score = 65.5 bits (158), Expect(2) = 5e-16
Identities = 27/28 (96%), Positives = 27/28 (96%)
Frame = -1
Query: 187 SETEFPKNWLKDGIQIKILFPFCLKPWH 104
SETEFPKNWL DGIQIKILFPFCLKPWH
Sbjct: 867 SETEFPKNWLTDGIQIKILFPFCLKPWH 894
Score = 44.3 bits (103), Expect(2) = 5e-16
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -3
Query: 68 EKKGQKADFCFLTIWGMEAKLP 3
+KKGQK DFCFLT+WGME +LP
Sbjct: 908 KKKGQKNDFCFLTVWGMETELP 929
>ref|YP_005087738.1| hypothetical chloroplast RF1 (chloroplast) [Gossypium raimondii]
gi|318084705|gb|ADV39177.1| hypothetical chloroplast RF1
(chloroplast) [Gossypium raimondii]
Length = 1894
Score = 65.5 bits (158), Expect(2) = 5e-16
Identities = 27/28 (96%), Positives = 27/28 (96%)
Frame = -1
Query: 187 SETEFPKNWLKDGIQIKILFPFCLKPWH 104
SETEFPKNWL DGIQIKILFPFCLKPWH
Sbjct: 867 SETEFPKNWLTDGIQIKILFPFCLKPWH 894
Score = 44.3 bits (103), Expect(2) = 5e-16
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -3
Query: 68 EKKGQKADFCFLTIWGMEAKLP 3
+KKGQK DFCFLT+WGME +LP
Sbjct: 908 KKKGQKNDFCFLTVWGMETELP 929
>ref|YP_005088961.1| hypothetical chloroplast RF1 (chloroplast) [Gossypium mustelinum]
gi|318084627|gb|ADV39100.1| hypothetical chloroplast RF1
(chloroplast) [Gossypium mustelinum]
Length = 1894
Score = 65.5 bits (158), Expect(2) = 5e-16
Identities = 27/28 (96%), Positives = 27/28 (96%)
Frame = -1
Query: 187 SETEFPKNWLKDGIQIKILFPFCLKPWH 104
SETEFPKNWL DGIQIKILFPFCLKPWH
Sbjct: 865 SETEFPKNWLTDGIQIKILFPFCLKPWH 892
Score = 44.3 bits (103), Expect(2) = 5e-16
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -3
Query: 68 EKKGQKADFCFLTIWGMEAKLP 3
+KKGQK DFCFLT+WGME +LP
Sbjct: 906 KKKGQKNDFCFLTVWGMETELP 927
>ref|YP_005088421.1| hypothetical chloroplast RF1 (chloroplast) [Gossypium herbaceum
subsp. africanum] gi|372291916|ref|YP_005089044.1|
hypothetical chloroplast RF1 (chloroplast) [Gossypium
arboreum] gi|318084375|gb|ADV38851.1| hypothetical
chloroplast RF1 (chloroplast) [Gossypium arboreum]
gi|318084545|gb|ADV39019.1| hypothetical chloroplast RF1
(chloroplast) [Gossypium herbaceum subsp. africanum]
Length = 1894
Score = 65.5 bits (158), Expect(2) = 5e-16
Identities = 27/28 (96%), Positives = 27/28 (96%)
Frame = -1
Query: 187 SETEFPKNWLKDGIQIKILFPFCLKPWH 104
SETEFPKNWL DGIQIKILFPFCLKPWH
Sbjct: 867 SETEFPKNWLTDGIQIKILFPFCLKPWH 894
Score = 44.3 bits (103), Expect(2) = 5e-16
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -3
Query: 68 EKKGQKADFCFLTIWGMEAKLP 3
+KKGQK DFCFLT+WGME +LP
Sbjct: 908 KKKGQKNDFCFLTVWGMETELP 929
>ref|YP_004286061.1| hypothetical chloroplast RF19 [Gossypium thurberi]
gi|290775844|gb|ADD62340.1| hypothetical chloroplast
RF19 [Gossypium thurberi]
Length = 1894
Score = 65.5 bits (158), Expect(2) = 5e-16
Identities = 27/28 (96%), Positives = 27/28 (96%)
Frame = -1
Query: 187 SETEFPKNWLKDGIQIKILFPFCLKPWH 104
SETEFPKNWL DGIQIKILFPFCLKPWH
Sbjct: 867 SETEFPKNWLTDGIQIKILFPFCLKPWH 894
Score = 44.3 bits (103), Expect(2) = 5e-16
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -3
Query: 68 EKKGQKADFCFLTIWGMEAKLP 3
+KKGQK DFCFLT+WGME +LP
Sbjct: 908 KKKGQKNDFCFLTVWGMETELP 929
>ref|YP_008992781.1| hypothetical chloroplast RF19 (chloroplast) [Gossypium longicalyx]
gi|326457358|gb|ADZ74619.1| hypothetical chloroplast
RF19 [Gossypium longicalyx]
Length = 1893
Score = 65.5 bits (158), Expect(2) = 5e-16
Identities = 27/28 (96%), Positives = 27/28 (96%)
Frame = -1
Query: 187 SETEFPKNWLKDGIQIKILFPFCLKPWH 104
SETEFPKNWL DGIQIKILFPFCLKPWH
Sbjct: 866 SETEFPKNWLTDGIQIKILFPFCLKPWH 893
Score = 44.3 bits (103), Expect(2) = 5e-16
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -3
Query: 68 EKKGQKADFCFLTIWGMEAKLP 3
+KKGQK DFCFLT+WGME +LP
Sbjct: 907 KKKGQKNDFCFLTVWGMETELP 928
>ref|YP_538982.1| hypothetical chloroplast RF1 [Gossypium hirsutum]
gi|118574750|sp|Q2L951.1|YCF1_GOSHI RecName:
Full=Putative membrane protein ycf1; Short=RF1
gi|85687462|gb|ABC73674.1| hypothetical chloroplast RF1
[Gossypium hirsutum] gi|329317215|gb|AEB90573.1|
hypothetical chloroplast RF1 (chloroplast) [Gossypium
hirsutum] gi|329317299|gb|AEB90656.1| hypothetical
chloroplast RF1 (chloroplast) [Gossypium hirsutum]
Length = 1892
Score = 65.5 bits (158), Expect(2) = 5e-16
Identities = 27/28 (96%), Positives = 27/28 (96%)
Frame = -1
Query: 187 SETEFPKNWLKDGIQIKILFPFCLKPWH 104
SETEFPKNWL DGIQIKILFPFCLKPWH
Sbjct: 865 SETEFPKNWLTDGIQIKILFPFCLKPWH 892
Score = 44.3 bits (103), Expect(2) = 5e-16
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -3
Query: 68 EKKGQKADFCFLTIWGMEAKLP 3
+KKGQK DFCFLT+WGME +LP
Sbjct: 906 KKKGQKNDFCFLTVWGMETELP 927