BLASTX nr result

ID: Paeonia22_contig00047220 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia22_contig00047220
         (226 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AHE41633.1| RNA polymerase beta subunit protein (chloroplast)...    59   9e-07
ref|XP_004516189.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...    55   8e-06
ref|YP_002149733.1| RNA polymerase beta subunit [Cicer arietinum...    55   8e-06
ref|YP_762253.1| RNA polymerase beta subunit [Morus indica] gi|1...    55   8e-06

>gb|AHE41633.1| RNA polymerase beta subunit protein (chloroplast) [Paeonia obovata]
          Length = 1070

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 28/33 (84%), Positives = 29/33 (87%)
 Frame = +3

Query: 3   RIGDWGSPESPFHEIFDRSKRVWMLYLSPSIDE 101
           RIGDWGS ESPF+EI D SKRV MLYLSPSIDE
Sbjct: 443 RIGDWGSLESPFYEISDSSKRVRMLYLSPSIDE 475


>ref|XP_004516189.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase subunit
           beta-like [Cicer arietinum]
          Length = 1747

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 26/33 (78%), Positives = 28/33 (84%)
 Frame = +3

Query: 3   RIGDWGSPESPFHEIFDRSKRVWMLYLSPSIDE 101
           RIG WGS ESPF+EI DRSKR+ MLYLSPS DE
Sbjct: 430 RIGHWGSIESPFYEISDRSKRIQMLYLSPSRDE 462


>ref|YP_002149733.1| RNA polymerase beta subunit [Cicer arietinum]
           gi|197089800|gb|ACH41070.1| RNA polymerase beta subunit
           [Cicer arietinum]
          Length = 1070

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 26/33 (78%), Positives = 28/33 (84%)
 Frame = +3

Query: 3   RIGDWGSPESPFHEIFDRSKRVWMLYLSPSIDE 101
           RIG WGS ESPF+EI DRSKR+ MLYLSPS DE
Sbjct: 443 RIGHWGSIESPFYEISDRSKRIQMLYLSPSRDE 475


>ref|YP_762253.1| RNA polymerase beta subunit [Morus indica]
           gi|122166813|sp|Q09X25.1|RPOB_MORIN RecName:
           Full=DNA-directed RNA polymerase subunit beta; AltName:
           Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit beta; Short=RNA polymerase subunit beta
           gi|78100309|gb|ABB20950.1| RNA polymerase beta subunit
           [Morus indica]
          Length = 1070

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 26/33 (78%), Positives = 29/33 (87%)
 Frame = +3

Query: 3   RIGDWGSPESPFHEIFDRSKRVWMLYLSPSIDE 101
           RIG WGS ESPF+EI +RSK+V MLYLSPSIDE
Sbjct: 443 RIGHWGSLESPFYEISERSKKVRMLYLSPSIDE 475


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