BLASTX nr result

ID: Paeonia22_contig00046550 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia22_contig00046550
         (272 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004301329.1| PREDICTED: uncharacterized protein LOC101296...    75   9e-12
emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]    64   2e-08
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]               64   2e-08
emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana]          63   4e-08
emb|CAN65855.1| hypothetical protein VITISV_013124 [Vitis vinifera]    59   9e-07

>ref|XP_004301329.1| PREDICTED: uncharacterized protein LOC101296391 [Fragaria vesca
           subsp. vesca]
          Length = 323

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 40/81 (49%), Positives = 51/81 (62%), Gaps = 7/81 (8%)
 Frame = +1

Query: 4   NRSSNRGRGTYSSNKHVPSNRGRGTS----KPGNS---NPPNRPTCQICERIGHTAIDCY 162
           N +SN GRG        P NRGRG S     P +S   N   RPTCQIC + GHTA+DCY
Sbjct: 144 NPTSNFGRG-------FPLNRGRGASVLGPHPSSSSLFNNQARPTCQICSKTGHTALDCY 196

Query: 163 DRMNTAFEGRIPAKKLMAMIA 225
           +R+N +F+GR+P++ L AM A
Sbjct: 197 NRLNLSFQGRVPSRNLSAMAA 217


>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
          Length = 1171

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 30/80 (37%), Positives = 42/80 (52%)
 Frame = +1

Query: 31  TYSSNKHVPSNRGRGTSKPGNSNPPNRPTCQICERIGHTAIDCYDRMNTAFEGRIPAKKL 210
           T   N    + R + T    +  P NRP CQIC + GHTAIDC+ R + +++GR P + L
Sbjct: 246 TKMQNAASSNYRSQQTRSTPSQLPNNRPVCQICGKSGHTAIDCFHRFDYSYQGRFPPQDL 305

Query: 211 MAMIAXXXXXXXXXXWFTDS 270
            AM+A          W+ DS
Sbjct: 306 AAMVAETNATFDHQVWYMDS 325


>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
 Frame = +1

Query: 16  NRGRGTYSSNKHVPSNR---------GRGTSKPGNSNPPNRPTCQICERIGHTAIDCYDR 168
           +RGRGT+S ++    +R         G  TS   +     R  CQIC R GH+AIDC++R
Sbjct: 261 SRGRGTFSHSRGSSGSRRSSILGPAPGTTTSNGNSFFNTGRIQCQICSRPGHSAIDCFNR 320

Query: 169 MNTAFEGRIPAKKLMAMIAXXXXXXXXXXWFTDS 270
           +N ++EGR+P+ +L AM A          W TD+
Sbjct: 321 LNLSYEGRVPSSRLNAMTA--HHSPSEETWLTDT 352


>emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana]
          Length = 1466

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 35/87 (40%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
 Frame = +1

Query: 16  NRGRGTYSSNKHVPSNRGRGTSKPGNSNPPN--RPTCQICERIGHTAIDCYDRMNTAFEG 189
           NRGRG YS+       RGRG S+  +++P +  RP CQIC RIGHTAI CY+R +  ++ 
Sbjct: 252 NRGRGGYST-------RGRGFSQHQSASPSSGQRPVCQICGRIGHTAIKCYNRFDNNYQS 304

Query: 190 RIPAKKLMAMIAXXXXXXXXXXWFTDS 270
            +P +   A  A          W+ DS
Sbjct: 305 EVPTQ---AFSALRVSDETGKEWYPDS 328


>emb|CAN65855.1| hypothetical protein VITISV_013124 [Vitis vinifera]
          Length = 456

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 10/99 (10%)
 Frame = +1

Query: 4   NRSSNRGRGTYSSNKHVPSN---RGRGTSKPGNSNPP------NRPTCQICERIGHTAID 156
           NRS + G   +  +  +PS+   R      P +S+PP      +R  CQIC+R  H A+D
Sbjct: 243 NRSGSSGTSKFPGS--IPSSSPFRQPLPHLPSSSSPPVSHDSRSRSPCQICKRENHQALD 300

Query: 157 CYDRMNTAFEGRIPAKKLMAMIA-XXXXXXXXXXWFTDS 270
           CY+RMN AF+GR P  +L+AM+            W+ DS
Sbjct: 301 CYNRMNYAFQGRHPPIELVAMVVEANTTYLNQHQWYVDS 339


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