BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia22_contig00044840
         (320 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]               49   1e-06

>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score = 48.5 bits (114), Expect(2) = 1e-06
 Identities = 23/45 (51%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
 Frame = -3

Query: 195  TLFTYQKK-TYFVFLIHMDDILSTGNDEYHISALIQNLDKLFSIK 64
            ++FT+  +  Y + LI++DDIL TGN+  HIS LI NL+ LFS+K
Sbjct: 1051 SMFTFNNRGIYIILLIYVDDILITGNNSSHISHLIHNLNSLFSMK 1095



 Score = 29.3 bits (64), Expect(2) = 1e-06
 Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
 Frame = -2

Query: 262  APHAWFRKFSD--*HHGLSVSKADYSLY 185
            AP AWFR FSD     G   S+ADYS++
Sbjct: 1026 APRAWFRCFSDYLEELGFLESRADYSMF 1053