BLASTX nr result

ID: Paeonia22_contig00039161 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia22_contig00039161
         (396 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521979.1| pentatricopeptide repeat-containing protein,...    59   5e-07
ref|XP_002325338.2| pentatricopeptide repeat-containing family p...    58   2e-06
ref|XP_003555569.1| PREDICTED: pentatricopeptide repeat-containi...    57   3e-06
ref|XP_007030408.1| Pentatricopeptide repeat superfamily protein...    57   3e-06
ref|XP_004304773.1| PREDICTED: pentatricopeptide repeat-containi...    55   8e-06

>ref|XP_002521979.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538783|gb|EEF40383.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 496

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 26/53 (49%), Positives = 41/53 (77%)
 Frame = -2

Query: 395 VIEVMTSDRSKLDETVYSSIVKGVADSGMIKEATEIRQKLIEQKFLKEEIVLN 237
           V+E+M S R K DE +YS+++  +AD+GM++EA E+RQKLI  K LK++ +L+
Sbjct: 442 VLEIMISSRCKPDEEIYSALINSLADAGMMEEANELRQKLINIKVLKDQSILH 494


>ref|XP_002325338.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550316701|gb|EEE99719.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 443

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 26/47 (55%), Positives = 38/47 (80%)
 Frame = -2

Query: 395 VIEVMTSDRSKLDETVYSSIVKGVADSGMIKEATEIRQKLIEQKFLK 255
           V+E+M S R K DE +YS+++K VAD+GM++EA E+ QKLIE+K L+
Sbjct: 391 VLEMMISGRYKPDEEIYSTLIKSVADAGMVEEADELHQKLIERKVLR 437


>ref|XP_003555569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08610-like isoform X1 [Glycine max]
           gi|571569757|ref|XP_006606448.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g08610-like isoform X2 [Glycine max]
          Length = 589

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 25/53 (47%), Positives = 39/53 (73%)
 Frame = -2

Query: 395 VIEVMTSDRSKLDETVYSSIVKGVADSGMIKEATEIRQKLIEQKFLKEEIVLN 237
           V+++M   +   DE +YS+++K VAD GM+KEA ++ Q LI+ K LK+EI+LN
Sbjct: 537 VLDLMVKGQCNPDERIYSALIKAVADGGMLKEANDLHQTLIKWKILKKEIMLN 589


>ref|XP_007030408.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
           cacao] gi|508719013|gb|EOY10910.1| Pentatricopeptide
           repeat superfamily protein, putative [Theobroma cacao]
          Length = 595

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 26/53 (49%), Positives = 40/53 (75%)
 Frame = -2

Query: 395 VIEVMTSDRSKLDETVYSSIVKGVADSGMIKEATEIRQKLIEQKFLKEEIVLN 237
           V+E+M S R K DET   +I+KG+AD+GM++EA ++RQKL+E K  +E  +L+
Sbjct: 543 VLEMMVSSRCKPDETTCWTIIKGIADAGMMEEANKLRQKLMEWKVFRERTLLS 595


>ref|XP_004304773.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08610-like [Fragaria vesca subsp. vesca]
          Length = 583

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 26/49 (53%), Positives = 38/49 (77%)
 Frame = -2

Query: 395 VIEVMTSDRSKLDETVYSSIVKGVADSGMIKEATEIRQKLIEQKFLKEE 249
           V+E+M SD+   DE +YS+I++GV  +GM KEA ++RQKLIE K ++EE
Sbjct: 533 VLEMMISDQCMPDEAIYSTILQGVTAAGMTKEADQLRQKLIEWKVVQEE 581


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