BLASTX nr result

ID: Paeonia22_contig00038417 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia22_contig00038417
         (286 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50976.1| T4.15 [Malus x robusta]                                57   3e-07
gb|ABN08144.1| RNA-directed DNA polymerase ; HMG-I and HMG-Y, DN...    53   4e-07
gb|ABN09815.1| hypothetical protein MtrDRAFT_AC167711g37v2 [Medi...    49   8e-07
gb|ABB00038.1| reverse transcriptase family member [Glycine max]       54   1e-06
gb|AEJ72569.1| putative reverse transcriptase family member [Mal...    55   2e-06
gb|ABN08556.1| Polyprotein, putative [Medicago truncatula]             50   3e-06

>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score = 56.6 bits (135), Expect(2) = 3e-07
 Identities = 24/36 (66%), Positives = 28/36 (77%)
 Frame = -2

Query: 108 AIWLAILYRTECWAVRRQHTHKVSVTEMQMLIWMCG 1
           AI  A+LY TECWAV+ QH HK+ V EM+ML WMCG
Sbjct: 849 AIRPAMLYGTECWAVKHQHVHKMGVAEMRMLRWMCG 884



 Score = 23.5 bits (49), Expect(2) = 3e-07
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -3

Query: 173 LKWRNVPNILFDKHVPIKDK 114
           +KW++   +L D+ +P+K K
Sbjct: 823 MKWKSASGVLCDRRMPLKLK 842


>gb|ABN08144.1| RNA-directed DNA polymerase ; HMG-I and HMG-Y, DNA-binding,
           putative [Medicago truncatula]
          Length = 195

 Score = 52.8 bits (125), Expect(2) = 4e-07
 Identities = 24/36 (66%), Positives = 29/36 (80%)
 Frame = -2

Query: 108 AIWLAILYRTECWAVRRQHTHKVSVTEMQMLIWMCG 1
           AI  A+LY TECWAV+ QH ++VSVTEM+ML WM G
Sbjct: 133 AIRPALLYGTECWAVKSQHENQVSVTEMRMLRWMSG 168



 Score = 26.9 bits (58), Expect(2) = 4e-07
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -3

Query: 173 LKWRNVPNILFDKHVPIKDK 114
           LKWR    +L DK VP+K K
Sbjct: 107 LKWRRASGVLCDKKVPLKLK 126


>gb|ABN09815.1| hypothetical protein MtrDRAFT_AC167711g37v2 [Medicago truncatula]
          Length = 104

 Score = 49.3 bits (116), Expect(2) = 8e-07
 Identities = 20/32 (62%), Positives = 25/32 (78%)
 Frame = -2

Query: 96  AILYRTECWAVRRQHTHKVSVTEMQMLIWMCG 1
           A+LY TECWAV+ QH +++SV EM ML WM G
Sbjct: 46  ALLYGTECWAVKSQHENQISVAEMMMLRWMSG 77



 Score = 29.3 bits (64), Expect(2) = 8e-07
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -3

Query: 206 SYSSSKILCIILKWRNVPNILFDKHVPIKDK 114
           +Y S +I    LKWR   ++L DK VP+K K
Sbjct: 5   TYVSHRIQVGWLKWRRASSVLCDKKVPLKLK 35


>gb|ABB00038.1| reverse transcriptase family member [Glycine max]
          Length = 377

 Score = 53.5 bits (127), Expect(2) = 1e-06
 Identities = 23/36 (63%), Positives = 27/36 (75%)
 Frame = -2

Query: 108 AIWLAILYRTECWAVRRQHTHKVSVTEMQMLIWMCG 1
           A+   ILY TECWAV+ QH +KV V EM+ML WMCG
Sbjct: 241 AVRPTILYGTECWAVKSQHENKVGVAEMRMLRWMCG 276



 Score = 24.6 bits (52), Expect(2) = 1e-06
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 173 LKWRNVPNILFDKHVPIKDK 114
           +KWR    +L D  VPIK K
Sbjct: 215 MKWRKASGVLCDAKVPIKLK 234


>gb|AEJ72569.1| putative reverse transcriptase family member [Malus domestica]
          Length = 212

 Score = 55.1 bits (131), Expect(2) = 2e-06
 Identities = 22/32 (68%), Positives = 26/32 (81%)
 Frame = -2

Query: 96  AILYRTECWAVRRQHTHKVSVTEMQMLIWMCG 1
           A+LY TECWAV+ QH HK+ V EM+ML WMCG
Sbjct: 79  AMLYGTECWAVKYQHVHKMGVAEMRMLRWMCG 110



 Score = 22.3 bits (46), Expect(2) = 2e-06
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -3

Query: 173 LKWRNVPNILFDKHVPIKDK 114
           +KW++   +L D+ +P+K K
Sbjct: 49  MKWKSASGVLCDRCMPLKLK 68


>gb|ABN08556.1| Polyprotein, putative [Medicago truncatula]
          Length = 137

 Score = 50.4 bits (119), Expect(2) = 3e-06
 Identities = 22/36 (61%), Positives = 28/36 (77%)
 Frame = -2

Query: 108 AIWLAILYRTECWAVRRQHTHKVSVTEMQMLIWMCG 1
           A+  A+LY TECWAV+ QH ++VSV EM+ML WM G
Sbjct: 61  AVRPALLYGTECWAVKSQHENQVSVVEMRMLRWMSG 96



 Score = 26.2 bits (56), Expect(2) = 3e-06
 Identities = 15/43 (34%), Positives = 18/43 (41%)
 Frame = -3

Query: 242 RCLTPTRCRFFQSYSSSKILCIILKWRNVPNILFDKHVPIKDK 114
           R   P       S+ S  I    L WR    +L DK VP+K K
Sbjct: 12  RGFLPVNSVLCSSWVSHHIQAGWLNWRRASGVLCDKKVPLKLK 54


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