BLASTX nr result

ID: Paeonia22_contig00037126 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia22_contig00037126
         (707 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM09536.1| reverse transcriptase [Medicago sativa]                 68   3e-09
ref|XP_004296004.1| PREDICTED: putative ribonuclease H protein A...    65   3e-08
ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein A...    62   2e-07
ref|XP_004295654.1| PREDICTED: uncharacterized protein LOC101314...    61   3e-07

>gb|AAM09536.1| reverse transcriptase [Medicago sativa]
          Length = 168

 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 46/152 (30%), Positives = 72/152 (47%), Gaps = 1/152 (0%)
 Frame = +2

Query: 218 SLEEGRLGLKELVTLNKSTLLKSGWKVIQXXXXXXXFLKNKFSVDMNRRLNRSTS-VWK* 394
           S + G L +++   +N+++LL   WK+I          + +F  +   + +  TS VW  
Sbjct: 11  SKDTGVLAVRDPAQVNRASLLLLTWKLITSNEQWAHICRVRFLNNYTPKSHYITSSVWPG 70

Query: 395 LKLAFIDIYAQDRWRVGNGKNILFWKDDWLQSSIHGILHLPDHIMPKL*LPISSFMHR*K 574
           LK     I+    W VGNG+NI FW D WL S I    ++P  ++  + L ++ F+    
Sbjct: 71  LKSNIQYIFYHSIWTVGNGRNIRFWSDKWLDSPIAEHWNIPPSLISDIELKVNDFIVNGT 130

Query: 575 *NIPHSF*DRYPELTQTILSIDLPVDYHEDYL 670
             +P     + P L   I SI LPVD   D L
Sbjct: 131 WCLPDYIQQKDPALAAKIQSITLPVDDIPDVL 162


>ref|XP_004296004.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 751

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 45/157 (28%), Positives = 72/157 (45%), Gaps = 1/157 (0%)
 Frame = +2

Query: 227 EGRLGLKELVTLNKSTLLKSGWKVIQXXXXXXXFLKNKFSVDMNRRLNRSTS-VWK*LKL 403
           E  L L+ L  L  + L+   W+ +        F   +F++  + +    TS VW  LK 
Sbjct: 295 EAGLDLRNLKALYTAGLISLAWQTLLQSSSWGSFACRRFTIFRHMKFQYFTSSVWHGLKR 354

Query: 404 AFIDIYAQDRWRVGNGKNILFWKDDWLQSSIHGILHLPDHIMPKL*LPISSFMHR*K*NI 583
               ++   RW +G+G +ILFW D WL SSI   L++   +   L   ++ F+   +  +
Sbjct: 355 VLPLLFEHSRWIIGDGNSILFWSDKWLHSSIIQQLNM-GSLSHLLNSRVADFIWDQQWAL 413

Query: 584 PHSF*DRYPELTQTILSIDLPVDYHEDYLI*PKSKDG 694
           P  F + +P+  + IL I LP     D LI   S  G
Sbjct: 414 PSHFSNLFPDCAKQILEIPLPNTPESDILIWEHSSSG 450


>ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 872

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 32/88 (36%), Positives = 49/88 (55%)
 Frame = +2

Query: 221 LEEGRLGLKELVTLNKSTLLKSGWKVIQXXXXXXXFLKNKFSVDMNRRLNRSTSVWK*LK 400
           ++EG LGLK+L  LN S LLK  W++         F++N+FS    RR    +S+W  ++
Sbjct: 353 IDEGGLGLKKLDVLNSSLLLKRCWEIFTSSFEGCCFIRNRFS---KRRSYAPSSIWPGVR 409

Query: 401 LAFIDIYAQDRWRVGNGKNILFWKDDWL 484
             +  +    RW VG G  I FW+D++L
Sbjct: 410 KFWGLVQNNTRWLVGTGDKISFWRDNFL 437


>ref|XP_004295654.1| PREDICTED: uncharacterized protein LOC101314263 [Fragaria vesca
           subsp. vesca]
          Length = 839

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 44/161 (27%), Positives = 73/161 (45%), Gaps = 2/161 (1%)
 Frame = +2

Query: 221 LEEGRLGLKELVTLNKSTLLKSGWKVIQXXXXXXXFLKNKFSVDMNRRLN--RSTSVWK* 394
           L+EG LG++ ++ LN++ LLK  W  +        F   +F     +  +  + +S+W  
Sbjct: 441 LKEGGLGVRNIMALNQAFLLKKFWDFLTKSTTAAAFFSARFLQRSGQPCSYYKRSSIWPG 500

Query: 395 LKLAFIDIYAQDRWRVGNGKNILFWKDDWLQSSIHGILHLPDHIMPKL*LPISSFMHR*K 574
           ++  F DI    +W VGNG +I FW  +WL  SI   L +   +   L   +S F+    
Sbjct: 501 MRPLFTDILYNSKWVVGNGHSIDFWHGNWLNGSIIDKLGIVHQLGKSLCGKVSDFILNGS 560

Query: 575 *NIPHSF*DRYPELTQTILSIDLPVDYHEDYLI*PKSKDGN 697
                +       L   IL+I LP    +D L+   S +G+
Sbjct: 561 WLCSTNLNAELAALWSEILAIQLPSYDIDDKLVWLDSLEGS 601


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