BLASTX nr result
ID: Paeonia22_contig00036687
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia22_contig00036687
(299 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 107 2e-21
ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prun... 80 3e-13
ref|XP_007032921.1| DNA/RNA polymerases superfamily protein [The... 77 3e-12
emb|CAC80138.1| DNA-dependent RNA polymerase [Spinacia oleracea] 75 1e-11
ref|XP_004232127.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 68 1e-09
ref|XP_002533596.1| conserved hypothetical protein [Ricinus comm... 65 8e-09
ref|XP_006387518.1| hypothetical protein POPTR_0907s00020g [Popu... 61 1e-07
ref|XP_006338320.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 61 2e-07
sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymeras... 61 2e-07
dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymer... 60 2e-07
sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymeras... 60 2e-07
ref|XP_006384251.1| hypothetical protein POPTR_0004s11060g [Popu... 60 3e-07
ref|XP_006373532.1| hypothetical protein POPTR_0017s14590g [Popu... 58 1e-06
ref|XP_006389213.1| hypothetical protein POPTR_0035s003301g, par... 57 3e-06
gb|ABD96891.1| hypothetical protein [Cleome spinosa] 57 4e-06
>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial [Vitis vinifera]
gi|298204431|emb|CBI16911.3| unnamed protein product
[Vitis vinifera]
Length = 1035
Score = 107 bits (266), Expect = 2e-21
Identities = 59/102 (57%), Positives = 69/102 (67%), Gaps = 3/102 (2%)
Frame = +2
Query: 2 WRSIAKYASPKKLRFSI--NSHSSLRVYSYLGLSHASTFPEKIKFRHSELGSCSSSGFLG 175
WR+IAK A P+ R + +S R YS+LG S FPE +KF E SCSSSGF
Sbjct: 41 WRNIAKRAIPRAPRKCVYLDSQPLSRRYSFLGFSQDLIFPEIMKFGTFEPSSCSSSGFSE 100
Query: 176 MGFCRIGEFSPREESIGRPSFGCARNQTGFNA-CPKSYASVA 298
MGF RIGE S RE+++GRPSFGC RNQ GF+ CPKSYASVA
Sbjct: 101 MGFRRIGEISSREDAVGRPSFGCLRNQMGFSGFCPKSYASVA 142
>ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prunus persica]
gi|462411068|gb|EMJ16117.1| hypothetical protein
PRUPE_ppa000719mg [Prunus persica]
Length = 1024
Score = 80.1 bits (196), Expect = 3e-13
Identities = 48/100 (48%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Frame = +2
Query: 2 WRSIAKYASPKKLRFSINSHSSLRVYSYLGLSHASTFPEKIKFRHSELGSCSSSGFLGMG 181
WR+ AK A +K RF INS S R YS LG+ S FP F+ EL SCSS F +G
Sbjct: 37 WRNFAKQAISRKQRFHINSQSFSRAYSLLGICQESVFPG--NFKPFELSSCSSLRFSEVG 94
Query: 182 FCRIGEFSPREESIGRPSFGCARNQTGFNA-CPKSYASVA 298
F G S E+ + +PSF RN FN CPK YASVA
Sbjct: 95 FRGKGAISSPEDCMCKPSFWSVRNPIWFNGFCPKGYASVA 134
>ref|XP_007032921.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508711950|gb|EOY03847.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 1100
Score = 76.6 bits (187), Expect = 3e-12
Identities = 47/101 (46%), Positives = 59/101 (58%), Gaps = 2/101 (1%)
Frame = +2
Query: 2 WRSIAKYASPKKLRFSINSHSSLRVYSYLGLSHASTFPEKIKFRHSELGS-CSSSGFLGM 178
WR+IAK+A ++ + R YS+LG S S F EK KFR + GS CS+S FL M
Sbjct: 43 WRNIAKHAISRRTH---SFQCFARTYSFLGTSQDSIFHEKSKFRGLKFGSFCSNSRFLDM 99
Query: 179 GFCRIGEFSPREESIGRPSFGCARNQTGFNA-CPKSYASVA 298
G RIGE E IG+ SFG RN+ G + CP+ Y SVA
Sbjct: 100 GGRRIGEVLTNVEYIGKQSFGSPRNEIGCSGLCPRGYVSVA 140
>emb|CAC80138.1| DNA-dependent RNA polymerase [Spinacia oleracea]
Length = 1036
Score = 75.1 bits (183), Expect = 1e-11
Identities = 41/99 (41%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Frame = +2
Query: 2 WRSIAKYASPKKLRFSINSHSSLRVYSYLGLSHASTFPEKIKFRHSELGSCSSSGFLGMG 181
WR+ AK A + + S R YS+LG +H F +++KFR ELG C + F +G
Sbjct: 42 WRNFAKQAISRTPNLCLRKFSISRSYSFLGGTHDCGFSDRLKFRPFELGFCKNRSFSEVG 101
Query: 182 FCRIGEFSPREESIGRPSFGCARNQTGFN-ACPKSYASV 295
FCR G +E RP GC N+ FN CPK YASV
Sbjct: 102 FCREGGSLVKEGIGERPVSGCLGNRLNFNVVCPKGYASV 140
>ref|XP_004232127.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase 2B,
chloroplastic/mitochondrial-like [Solanum lycopersicum]
Length = 1022
Score = 68.2 bits (165), Expect = 1e-09
Identities = 43/103 (41%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Frame = +2
Query: 2 WRSIAKYAS---PKKLRFSINSHSSLRVYSYLGLSHASTFPEKIKFRHSELGSCSSSGFL 172
WR+I K S P+K+ + +H+ YSYLG S F +K R SCS+SGFL
Sbjct: 32 WRNIVKQFSTRTPQKILLTSKNHA----YSYLGFGLHSVFKDKRTLRSFIPVSCSNSGFL 87
Query: 173 GMGFCRIGEFSPREESIGRPSFGCARNQTGFN-ACPKSYASVA 298
MGF +GEF P +E + RP ++Q N C K+YASVA
Sbjct: 88 EMGFQNLGEFLPGDEFLRRPLLCAMKSQVSNNDICRKNYASVA 130
>ref|XP_002533596.1| conserved hypothetical protein [Ricinus communis]
gi|223526525|gb|EEF28787.1| conserved hypothetical
protein [Ricinus communis]
Length = 395
Score = 65.5 bits (158), Expect = 8e-09
Identities = 40/113 (35%), Positives = 57/113 (50%), Gaps = 14/113 (12%)
Frame = +2
Query: 2 WRSIAKYASPKKLRFSINSHSSLRVYSYLGLSHASTFPEKIKFRHSELGSCSSSGFLGMG 181
WR++AK + S++SH YS+LGLS +F +K K S L +CSS +G
Sbjct: 2 WRNVAKQTISRAQSKSLSSHPLSSTYSFLGLSQEPSFTDKCKL--SPLYACSSL----VG 55
Query: 182 FCRIGEFSPREESIGRPSFGCARNQTGFNAC--------------PKSYASVA 298
FCR+GE P E+ +G+P FG N+ N+ P+ Y SVA
Sbjct: 56 FCRLGEIVPYEDFMGKPGFGLVGNKDNSNSSHMSMCNGYLCSGFYPRGYVSVA 108
>ref|XP_006387518.1| hypothetical protein POPTR_0907s00020g [Populus trichocarpa]
gi|550307443|gb|ERP46432.1| hypothetical protein
POPTR_0907s00020g [Populus trichocarpa]
Length = 153
Score = 61.2 bits (147), Expect = 1e-07
Identities = 41/105 (39%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Frame = +2
Query: 2 WRSIAKYASPKKLRFSINSHSSLRVYSYLGLSHASTFPEKIKFRHSELGSCSSSGFLGMG 181
WR++AK A+ K S+N S R YS+LG S F EK+KF HS + +
Sbjct: 2 WRNVAKQATLKSQSKSLNFPSFPRTYSFLGASKEPIFFEKLKF-HSLYNTSPR-----LS 55
Query: 182 FCRIGEFSPREESIGRPSFGCARNQTGFNA------CPKSYASVA 298
F IGE S E+ +G+PSF RN N CP+ Y SVA
Sbjct: 56 FRAIGEISTHEDFMGKPSFIFLRNSDSTNGNRCGGFCPRGYVSVA 100
>ref|XP_006338320.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial-like [Solanum tuberosum]
Length = 1019
Score = 60.8 bits (146), Expect = 2e-07
Identities = 43/103 (41%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
Frame = +2
Query: 2 WRSIAKYAS---PKKLRFSINSHSSLRVYSYLGLSHASTFPEKIKFRHSELGSCSSSGFL 172
WR+I K S P+K+ + S R YS+LG S F +K R SCS+SGFL
Sbjct: 32 WRNIVKQFSSRTPQKILLT----SKNRTYSFLGFGQDSVFKDKRILRSFIPVSCSNSGFL 87
Query: 173 GMGFCRIGEFSPREESIGRPSFGCARNQTGFN-ACPKSYASVA 298
MGF +GEF +E + RP ++Q N C KSYASVA
Sbjct: 88 EMGFQNLGEF---DEFLRRPLLCAMKSQVSNNDICRKSYASVA 127
>sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymerase 2B,
chloroplastic/mitochondrial; AltName:
Full=NictaRpoT2-tom; AltName: Full=T7 bacteriophage-type
single subunit RNA polymerase 2B; Flags: Precursor
gi|21425665|emb|CAC95020.1| mitochondrial and
chloroplast RNA polymerase [Nicotiana tabacum]
Length = 1021
Score = 60.8 bits (146), Expect = 2e-07
Identities = 43/102 (42%), Positives = 53/102 (51%), Gaps = 3/102 (2%)
Frame = +2
Query: 2 WRSIAKYAS---PKKLRFSINSHSSLRVYSYLGLSHASTFPEKIKFRHSELGSCSSSGFL 172
WR+I K S P+KL FS S R YS+LG S F + KFR SCS+ +
Sbjct: 36 WRNIIKQLSSRTPQKLLFS----SKNRTYSFLGFGQDSVFKDNTKFRSLIPISCSN---I 88
Query: 173 GMGFCRIGEFSPREESIGRPSFGCARNQTGFNACPKSYASVA 298
MGF +GE+ P +E + RP N F C KSYASVA
Sbjct: 89 VMGFQNLGEYLPGDEFLSRPLLKNQVNSNDF-CCRKSYASVA 129
>dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
sylvestris] gi|17221595|dbj|BAB78465.1| T7
bacteriophage-type single subunit RNA polymerase
[Nicotiana sylvestris]
Length = 1020
Score = 60.5 bits (145), Expect = 2e-07
Identities = 44/103 (42%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
Frame = +2
Query: 2 WRSIAKYAS---PKKLRFSINSHSSLRVYSYLGLSHASTFPEKIKFRHSELGSCSSSGFL 172
WR+I K S P+KL FS S R YS+LG S F + KFR SCS+ +
Sbjct: 36 WRNIIKQLSSRTPQKLLFS----SKNRTYSFLGFGQDSIFKDNTKFRSLIPISCSN---I 88
Query: 173 GMGFCRIGEFSPREESIGRPSFGCARNQTGFN-ACPKSYASVA 298
MGF +GE+ P +E + RP +NQ N C KSYASVA
Sbjct: 89 VMGFQNLGEYLPGDEFLSRP---LIKNQVNNNFCCRKSYASVA 128
>sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial; AltName: Full=NsRpoT-B;
AltName: Full=T7 bacteriophage-type single subunit RNA
polymerase 2; Flags: Precursor
gi|21425639|emb|CAC82575.2| phage-type RNA polymerase
[Nicotiana sylvestris]
Length = 1020
Score = 60.5 bits (145), Expect = 2e-07
Identities = 44/103 (42%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
Frame = +2
Query: 2 WRSIAKYAS---PKKLRFSINSHSSLRVYSYLGLSHASTFPEKIKFRHSELGSCSSSGFL 172
WR+I K S P+KL FS S R YS+LG S F + KFR SCS+ +
Sbjct: 36 WRNIIKQLSSRTPQKLLFS----SKNRTYSFLGFGQDSIFKDNTKFRSLIPISCSN---I 88
Query: 173 GMGFCRIGEFSPREESIGRPSFGCARNQTGFN-ACPKSYASVA 298
MGF +GE+ P +E + RP +NQ N C KSYASVA
Sbjct: 89 VMGFQNLGEYLPGDEFLSRP---LIKNQVNNNFCCRKSYASVA 128
>ref|XP_006384251.1| hypothetical protein POPTR_0004s11060g [Populus trichocarpa]
gi|550340797|gb|ERP62048.1| hypothetical protein
POPTR_0004s11060g [Populus trichocarpa]
Length = 475
Score = 60.1 bits (144), Expect = 3e-07
Identities = 42/105 (40%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Frame = +2
Query: 2 WRSIAKYASPKKLRFSINSHSSLRVYSYLGLSHASTFPEKIKFRHSELGSCSSSGFLGMG 181
WR++AK A K S+N S R +S+LG F EK KF HS S +
Sbjct: 39 WRNVAKQAILKPQSKSLNFPSFPRTHSFLGAPQEPIFFEKSKF-HSVNNSSPQ-----LC 92
Query: 182 FCRIGEFSPREESIGRPSFGCARNQTGFNA------CPKSYASVA 298
F RIGE S E+ +G+PSFG RN N CP+ Y SVA
Sbjct: 93 FRRIGEISTHEDYMGKPSFGFLRNGDSSNGNLCSGLCPRGYVSVA 137
>ref|XP_006373532.1| hypothetical protein POPTR_0017s14590g [Populus trichocarpa]
gi|550320354|gb|ERP51329.1| hypothetical protein
POPTR_0017s14590g [Populus trichocarpa]
Length = 987
Score = 58.2 bits (139), Expect = 1e-06
Identities = 41/104 (39%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Frame = +2
Query: 2 WRSIAKYASPKKLRFSINSHSSLRVYSYLGLSHASTFPEKIKFRHSELGSCSSSGFLGMG 181
WR++AK A+ K S+N S R YS+LG S F EK+KF HS L + S +
Sbjct: 2 WRNVAKQATLKSQSKSLNFPSFPRTYSFLGASKEPIFFEKLKF-HS-LNNTSPR----LS 55
Query: 182 FCRIGEFSPREESIGRPSFGCARNQTGFNA------CPKSYASV 295
F IGE S E+ +G+P F RN N CP+ Y SV
Sbjct: 56 FRAIGEISTHEDFMGKPRFIFLRNSDSTNGNRCAGFCPRGYVSV 99
>ref|XP_006389213.1| hypothetical protein POPTR_0035s003301g, partial [Populus
trichocarpa] gi|550311924|gb|ERP48127.1| hypothetical
protein POPTR_0035s003301g, partial [Populus
trichocarpa]
Length = 147
Score = 57.0 bits (136), Expect = 3e-06
Identities = 43/105 (40%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Frame = +2
Query: 2 WRSIAKYASPKKLRFSINSHSSLRVYSYLGLSHASTFPEKIKFRHSELGSCSSSGFLGMG 181
WR++AK A+ K S++ S R YS+LG S F EK+KF HS L + S +G
Sbjct: 2 WRNVAKQATLKTQSKSLDFPSFPRTYSFLGASREPIFFEKLKF-HS-LNNTSPR----LG 55
Query: 182 FCRIGEFSPREESIGRPSFGCARN--QTGFNAC----PKSYASVA 298
F I E S E+ +G+PSF RN T N C P+ Y SVA
Sbjct: 56 FRAIDEISTHEDFMGKPSFVFLRNIDSTNGNRCGGFFPRGYVSVA 100
>gb|ABD96891.1| hypothetical protein [Cleome spinosa]
Length = 1021
Score = 56.6 bits (135), Expect = 4e-06
Identities = 39/101 (38%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Frame = +2
Query: 2 WRSIAKYA-SPKKLRFSINSHSSLRVYSYLGLSHASTFPEKIKFRHSELGSCSSSGFLGM 178
WR+IAK S +R S+ S LG S S FPE FR S +G SSSGF M
Sbjct: 41 WRNIAKQTISRSPVRLSVCRQSR----GLLGFSSESIFPEIFIFRPSVIGPISSSGFHDM 96
Query: 179 GFCRIGEFSPREESIGRPSFGCARNQTGFNA-CPKSYASVA 298
G+ R E + GRP FG +++ F+ P+SY + A
Sbjct: 97 GYSRTCEIPAPGDFSGRPGFGFLKDECCFHRFSPRSYVNAA 137