BLASTX nr result
ID: Paeonia22_contig00036420
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia22_contig00036420
(423 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007211312.1| hypothetical protein PRUPE_ppa000513mg [Prun... 188 6e-46
ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [V... 187 1e-45
ref|XP_007036161.1| RNA-dependent RNA polymerase 2 isoform 1 [Th... 181 7e-44
gb|ADU04145.1| hypothetical protein [Gossypium hirsutum] 176 2e-42
ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis... 174 9e-42
gb|ADU04140.1| hypothetical protein [Gossypium hirsutum] 173 2e-41
ref|XP_004298927.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 168 8e-40
gb|EXC16034.1| RNA-dependent RNA polymerase 2 [Morus notabilis] 167 2e-39
ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Popu... 162 3e-38
ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 156 3e-36
gb|AHL27587.1| RNA-dependent RNA polymerase 4 [Salvia miltiorrhiza] 155 5e-36
ref|XP_003550744.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 149 3e-34
gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nico... 149 4e-34
ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 147 1e-33
ref|XP_006286933.1| hypothetical protein CARUB_v10000076mg, part... 146 3e-33
ref|XP_006396953.1| hypothetical protein EUTSA_v10028370mg [Eutr... 145 4e-33
ref|NP_192851.1| RNA-dependent RNA polymerase 2 [Arabidopsis tha... 144 1e-32
ref|XP_006579560.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 144 2e-32
ref|XP_003608944.1| Rna-dependent RNA polymerase [Medicago trunc... 144 2e-32
ref|XP_002872551.1| RNA-dependent RNA polymerase 2 [Arabidopsis ... 144 2e-32
>ref|XP_007211312.1| hypothetical protein PRUPE_ppa000513mg [Prunus persica]
gi|462407047|gb|EMJ12511.1| hypothetical protein
PRUPE_ppa000513mg [Prunus persica]
Length = 1118
Score = 188 bits (478), Expect = 6e-46
Identities = 85/139 (61%), Positives = 111/139 (79%)
Frame = -2
Query: 422 TNSVLAIEIATERKNWKSRGSGRVQFETLQVKSTAILLSSQDQLVFKGNNLSISETFEDL 243
T+SV A+EI ++ KNWKSRG GRVQF TL+ KS A LS Q+ LVFK +L +SET++D+
Sbjct: 33 TDSVFAVEIISDHKNWKSRGFGRVQFTTLEAKSEAYSLSLQNGLVFKSESLRLSETYDDI 92
Query: 242 VIRPIEAKHRVNNGVLHAGFMVKDDCMCVLETWEAVKVWFMPERKRIEFWVYLGKECYKL 63
+ RP++ K R+N VLHAGFMVK DCM +LE+WE V+ W MPERKR+EFWV+L ECYKL
Sbjct: 93 IQRPVDPKRRLNGTVLHAGFMVKGDCMSMLESWEGVRAWVMPERKRVEFWVWLRDECYKL 152
Query: 62 EIHFDDVLEAFGCCLGGEE 6
EI F++++E+FGC LGGE+
Sbjct: 153 EIAFENIMESFGCRLGGEK 171
>ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [Vitis vinifera]
gi|297733815|emb|CBI15062.3| unnamed protein product
[Vitis vinifera]
Length = 1127
Score = 187 bits (475), Expect = 1e-45
Identities = 87/136 (63%), Positives = 109/136 (80%)
Frame = -2
Query: 419 NSVLAIEIATERKNWKSRGSGRVQFETLQVKSTAILLSSQDQLVFKGNNLSISETFEDLV 240
N++ A+EIATE KNWKSRG GRVQFETLQ K A LLS Q LVF+G++LSIS TF+D++
Sbjct: 34 NTIYALEIATEHKNWKSRGFGRVQFETLQAKRAADLLSLQGDLVFRGSSLSISATFDDII 93
Query: 239 IRPIEAKHRVNNGVLHAGFMVKDDCMCVLETWEAVKVWFMPERKRIEFWVYLGKECYKLE 60
+RP+E +++V++GVLH GF+V+DDCM VLE+WE VK MPER R+EFWV E YKLE
Sbjct: 94 VRPVEPRNQVDSGVLHVGFLVEDDCMLVLESWEGVKTLVMPERNRVEFWVDKDGERYKLE 153
Query: 59 IHFDDVLEAFGCCLGG 12
+ FDDVLE+ CCLGG
Sbjct: 154 VPFDDVLESSACCLGG 169
>ref|XP_007036161.1| RNA-dependent RNA polymerase 2 isoform 1 [Theobroma cacao]
gi|590663258|ref|XP_007036162.1| RNA-dependent RNA
polymerase 2 isoform 1 [Theobroma cacao]
gi|508773406|gb|EOY20662.1| RNA-dependent RNA polymerase
2 isoform 1 [Theobroma cacao]
gi|508773407|gb|EOY20663.1| RNA-dependent RNA polymerase
2 isoform 1 [Theobroma cacao]
Length = 1149
Score = 181 bits (460), Expect = 7e-44
Identities = 83/137 (60%), Positives = 107/137 (78%)
Frame = -2
Query: 422 TNSVLAIEIATERKNWKSRGSGRVQFETLQVKSTAILLSSQDQLVFKGNNLSISETFEDL 243
T++V AIEI+T+R NWKSRG GRVQF TL+ KS A LLS ++ LVFK ++L +SET++D+
Sbjct: 40 TDTVFAIEISTDRNNWKSRGFGRVQFATLEAKSKAHLLSLRNDLVFKSHSLKLSETYDDI 99
Query: 242 VIRPIEAKHRVNNGVLHAGFMVKDDCMCVLETWEAVKVWFMPERKRIEFWVYLGKECYKL 63
+ RPI A HR++ GVLH GFMV+DD + VLE WE V+ W MPER+R+EFW++ ECYKL
Sbjct: 100 IPRPIRADHRLDGGVLHVGFMVQDDYLRVLERWEDVRGWLMPERRRLEFWLWNNGECYKL 159
Query: 62 EIHFDDVLEAFGCCLGG 12
E+ FDDVLE GCC G
Sbjct: 160 EVLFDDVLETVGCCFNG 176
>gb|ADU04145.1| hypothetical protein [Gossypium hirsutum]
Length = 1147
Score = 176 bits (447), Expect = 2e-42
Identities = 79/136 (58%), Positives = 100/136 (73%)
Frame = -2
Query: 419 NSVLAIEIATERKNWKSRGSGRVQFETLQVKSTAILLSSQDQLVFKGNNLSISETFEDLV 240
+SV AIEI+T+R NWKSRG GRVQF Q KS A+ LS D L+FK ++L +S T++D++
Sbjct: 36 DSVFAIEISTDRNNWKSRGFGRVQFAAPQAKSDALRLSRHDHLLFKSHSLKLSRTYDDII 95
Query: 239 IRPIEAKHRVNNGVLHAGFMVKDDCMCVLETWEAVKVWFMPERKRIEFWVYLGKECYKLE 60
RPI A HR++ GVLHAGFM DDC+ VLE WE V+ W MPER+R+EFWV+ ECYKL+
Sbjct: 96 PRPIRADHRLDGGVLHAGFMSSDDCLRVLERWEGVRGWIMPERRRLEFWVWTDGECYKLD 155
Query: 59 IHFDDVLEAFGCCLGG 12
FDD+ E GCC G
Sbjct: 156 FLFDDIFETVGCCFDG 171
>ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis sativus]
gi|316989905|gb|ADU77018.1| RNA-dependent RNA polymerase
2 [Cucumis sativus]
Length = 1117
Score = 174 bits (442), Expect = 9e-42
Identities = 82/138 (59%), Positives = 105/138 (76%)
Frame = -2
Query: 419 NSVLAIEIATERKNWKSRGSGRVQFETLQVKSTAILLSSQDQLVFKGNNLSISETFEDLV 240
+SV AIEI TERKNWKSRGSGRVQF TL+ K+ A+ LS Q+ LVF NL S +D+V
Sbjct: 34 DSVFAIEIFTERKNWKSRGSGRVQFTTLEAKAKAMSLSVQNSLVFGTQNLRFSLINDDIV 93
Query: 239 IRPIEAKHRVNNGVLHAGFMVKDDCMCVLETWEAVKVWFMPERKRIEFWVYLGKECYKLE 60
+RP+ A +R NGVLH GFM+K++ M VLE+WE VK W MPER+RIEFW++ +ECYKLE
Sbjct: 94 VRPVHATNRTENGVLHVGFMLKEERMSVLESWEGVKAWIMPERRRIEFWIWHEQECYKLE 153
Query: 59 IHFDDVLEAFGCCLGGEE 6
+ F+++LE G CLG E+
Sbjct: 154 VMFEEILETTGHCLGEEK 171
>gb|ADU04140.1| hypothetical protein [Gossypium hirsutum]
Length = 1147
Score = 173 bits (439), Expect = 2e-41
Identities = 78/136 (57%), Positives = 99/136 (72%)
Frame = -2
Query: 419 NSVLAIEIATERKNWKSRGSGRVQFETLQVKSTAILLSSQDQLVFKGNNLSISETFEDLV 240
+SV AIEI+T+R NWKSRG GRVQF Q S A+ LS D L+FK ++L +S T++D++
Sbjct: 36 DSVFAIEISTDRNNWKSRGFGRVQFAAPQAMSDALRLSRHDHLLFKSHSLKLSRTYDDII 95
Query: 239 IRPIEAKHRVNNGVLHAGFMVKDDCMCVLETWEAVKVWFMPERKRIEFWVYLGKECYKLE 60
RPI A HR++ GVLHAGFM DDC+ VLE WE V+ W MPER+R+EFWV+ ECYKL+
Sbjct: 96 PRPIRADHRLDGGVLHAGFMSSDDCLRVLERWEGVRGWIMPERRRLEFWVWTDGECYKLD 155
Query: 59 IHFDDVLEAFGCCLGG 12
FDD+ E GCC G
Sbjct: 156 FLFDDLFETVGCCFDG 171
>ref|XP_004298927.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Fragaria vesca
subsp. vesca]
Length = 1136
Score = 168 bits (425), Expect = 8e-40
Identities = 73/138 (52%), Positives = 105/138 (76%)
Frame = -2
Query: 419 NSVLAIEIATERKNWKSRGSGRVQFETLQVKSTAILLSSQDQLVFKGNNLSISETFEDLV 240
+SV A+EI ++ KNWKSRG GR+QF L+ K+ A LSS L FK +NL + E +D++
Sbjct: 37 DSVFAVEIVSDHKNWKSRGYGRIQFTALRHKARAQSLSSSADLFFKSHNLRLFEAHDDII 96
Query: 239 IRPIEAKHRVNNGVLHAGFMVKDDCMCVLETWEAVKVWFMPERKRIEFWVYLGKECYKLE 60
RP++ +HR+N+ VLHAGF+V D+ M VLE+WE V+ W MPERKR+EFWV+ +CYK+E
Sbjct: 97 PRPLDPRHRLNSTVLHAGFVVNDETMSVLESWEGVRAWVMPERKRVEFWVWRVGDCYKME 156
Query: 59 IHFDDVLEAFGCCLGGEE 6
I F++++E+ GCCLGG++
Sbjct: 157 IAFENIVESVGCCLGGDK 174
>gb|EXC16034.1| RNA-dependent RNA polymerase 2 [Morus notabilis]
Length = 1115
Score = 167 bits (422), Expect = 2e-39
Identities = 76/134 (56%), Positives = 99/134 (73%)
Frame = -2
Query: 419 NSVLAIEIATERKNWKSRGSGRVQFETLQVKSTAILLSSQDQLVFKGNNLSISETFEDLV 240
NSV A+EI+TERKNWKSRG GRVQF +L K A LS + VF+ NL I +T +D+V
Sbjct: 35 NSVFAVEISTERKNWKSRGFGRVQFTSLAAKLVAQALSLSNNFVFRSRNLGIFDTHDDIV 94
Query: 239 IRPIEAKHRVNNGVLHAGFMVKDDCMCVLETWEAVKVWFMPERKRIEFWVYLGKECYKLE 60
P++ K R+ +GVLHAGFM++DD M VL++WE V+ W MPER R+EFWV+ ++CYKLE
Sbjct: 95 ALPVDPKLRLEDGVLHAGFMIRDDRMAVLQSWEGVRAWAMPERNRVEFWVWSDEDCYKLE 154
Query: 59 IHFDDVLEAFGCCL 18
+ F+DVLE G CL
Sbjct: 155 VAFEDVLETVGYCL 168
>ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Populus trichocarpa]
gi|222868578|gb|EEF05709.1| hypothetical protein
POPTR_0015s08500g [Populus trichocarpa]
Length = 1110
Score = 162 bits (411), Expect = 3e-38
Identities = 76/139 (54%), Positives = 107/139 (76%), Gaps = 1/139 (0%)
Frame = -2
Query: 419 NSVLAIEIATERKNWKSRGSGRVQFETLQVKSTAILLSSQDQLVFKGNNLSISETFEDLV 240
+SV AIEI+T RKNW SRG GRVQF +L+VK A+ LS +++LV K NL +SET++D++
Sbjct: 35 DSVFAIEISTVRKNWNSRGFGRVQFSSLEVKHEALSLSLKNKLVLKSQNLKLSETYDDII 94
Query: 239 IRPIEAKHRVNNGVLHAGFMVKDDCMCVLETWEAVKVWFMPERKRIEFWVYLGKEC-YKL 63
RP++ ++R+ NGVL+ GFM K+ +CVLE WE V+ WFMPER+RIEFW+ +G+E YKL
Sbjct: 95 PRPVKDQNRMENGVLYVGFMKKETTLCVLEYWEGVRGWFMPERRRIEFWIRVGQEFRYKL 154
Query: 62 EIHFDDVLEAFGCCLGGEE 6
+ F+D+LEA G L G++
Sbjct: 155 VVEFEDILEAVGYPLDGDK 173
>ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum tuberosum]
Length = 1119
Score = 156 bits (394), Expect = 3e-36
Identities = 75/137 (54%), Positives = 97/137 (70%)
Frame = -2
Query: 416 SVLAIEIATERKNWKSRGSGRVQFETLQVKSTAILLSSQDQLVFKGNNLSISETFEDLVI 237
SV A +I +E KNWKSRG GRVQFETLQ K + LS Q L+FKG+ LS+ +F+D++
Sbjct: 37 SVFACDIFSEHKNWKSRGHGRVQFETLQDKLHCLSLSEQGNLLFKGHQLSLVSSFDDIIA 96
Query: 236 RPIEAKHRVNNGVLHAGFMVKDDCMCVLETWEAVKVWFMPERKRIEFWVYLGKECYKLEI 57
RP+E K R +G+LH G +VK+D M VLETWE VK MPERK +EFWV +ECY+LE+
Sbjct: 97 RPVEPKCRFQDGILHTGLLVKNDVMQVLETWEDVKTLIMPERKCLEFWVSHAEECYRLEV 156
Query: 56 HFDDVLEAFGCCLGGEE 6
F DV+EA C L ++
Sbjct: 157 QFGDVVEATVCSLENQK 173
>gb|AHL27587.1| RNA-dependent RNA polymerase 4 [Salvia miltiorrhiza]
Length = 972
Score = 155 bits (392), Expect = 5e-36
Identities = 74/138 (53%), Positives = 101/138 (73%), Gaps = 3/138 (2%)
Frame = -2
Query: 416 SVLAIEIATERKNWKSRGSGRVQFETLQVKSTAILLSSQDQLVFKGNNLSISETFEDLVI 237
+V A+EI TER+NWKSRG GRVQFE+ + K A+ LS + +FKG LS++ + E+++I
Sbjct: 41 TVFAVEIFTERENWKSRGHGRVQFESPEAKIEALSLSHHRKFLFKGFYLSVTHSLEEIII 100
Query: 236 RPIEAKHRVNNG---VLHAGFMVKDDCMCVLETWEAVKVWFMPERKRIEFWVYLGKECYK 66
RP++ +RV +G VL AG M++ DCM LE+W +K+WFMPERK+I F+V G E YK
Sbjct: 101 RPVDPIYRVGDGGGLVLFAGIMIRADCMGTLESWNGMKLWFMPERKKIHFFVDHGGESYK 160
Query: 65 LEIHFDDVLEAFGCCLGG 12
LE+ F DVLE+ GCCLGG
Sbjct: 161 LEVQFGDVLESRGCCLGG 178
>ref|XP_003550744.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Glycine max]
Length = 1120
Score = 149 bits (377), Expect = 3e-34
Identities = 69/136 (50%), Positives = 99/136 (72%)
Frame = -2
Query: 422 TNSVLAIEIATERKNWKSRGSGRVQFETLQVKSTAILLSSQDQLVFKGNNLSISETFEDL 243
+++V A+EI ++ NWKSRG GRVQFETL +S A+ LS +QL+F + L +SET D+
Sbjct: 36 SSTVFALEIFSDNPNWKSRGFGRVQFETLDARSRALSLSQLNQLLFNRHFLRLSETDSDI 95
Query: 242 VIRPIEAKHRVNNGVLHAGFMVKDDCMCVLETWEAVKVWFMPERKRIEFWVYLGKECYKL 63
+ RP +HR+ NGVL+AGFM+ D M VLE+WE + W +P+RKR++FWV+ +CY+L
Sbjct: 96 IFRP---QHRLQNGVLYAGFMLSDHRMSVLESWEGIAGWVLPQRKRLDFWVWHNGDCYRL 152
Query: 62 EIHFDDVLEAFGCCLG 15
E F+D+LE+ G CLG
Sbjct: 153 EFLFEDILESHGYCLG 168
>gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana]
Length = 1120
Score = 149 bits (376), Expect = 4e-34
Identities = 72/138 (52%), Positives = 96/138 (69%), Gaps = 1/138 (0%)
Frame = -2
Query: 416 SVLAIEIATERKNWKSRGSGRVQFETLQVKSTAILLSSQDQLVFKGNNLSISETFEDLVI 237
SV A +I +E KNWKSRG GRVQFET Q K ++ LS Q +LVFKG+ L ++ +F+D++
Sbjct: 37 SVFACDIFSEHKNWKSRGHGRVQFETSQSKLQSLSLSEQGKLVFKGHQLILTSSFDDIIA 96
Query: 236 RPIEAKHRVNNGVLHAGFMVKDDCMCVLETWEAVKVWFMPERKRIEFWVYLGK-ECYKLE 60
RPIE +R G+LH G ++++D M VLETWE VK MPERK +EFWV K ECY+LE
Sbjct: 97 RPIELNYRFQKGILHTGILLENDYMEVLETWENVKTLIMPERKSLEFWVSHAKGECYRLE 156
Query: 59 IHFDDVLEAFGCCLGGEE 6
+ F D++E C L E+
Sbjct: 157 VQFGDIIETCECSLEDEK 174
>ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum
lycopersicum]
Length = 1119
Score = 147 bits (372), Expect = 1e-33
Identities = 71/137 (51%), Positives = 93/137 (67%)
Frame = -2
Query: 416 SVLAIEIATERKNWKSRGSGRVQFETLQVKSTAILLSSQDQLVFKGNNLSISETFEDLVI 237
SV A +I +E KNWKSRG GRVQFETLQ K + L+ Q L+FKG+ LS+ +F+D++
Sbjct: 37 SVFACDIHSEHKNWKSRGHGRVQFETLQDKLHCLSLAEQGNLLFKGHQLSLVSSFDDIIT 96
Query: 236 RPIEAKHRVNNGVLHAGFMVKDDCMCVLETWEAVKVWFMPERKRIEFWVYLGKECYKLEI 57
RP+E K R G+LH G +V+ D M VLETWE VK MPERK +EFWV +ECY+LE+
Sbjct: 97 RPVEPKCRFQAGILHTGLLVEKDVMQVLETWEDVKTLIMPERKCLEFWVSHAEECYRLEV 156
Query: 56 HFDDVLEAFGCCLGGEE 6
F DV E C + ++
Sbjct: 157 QFGDVTEGTLCSVENQK 173
>ref|XP_006286933.1| hypothetical protein CARUB_v10000076mg, partial [Capsella rubella]
gi|482555639|gb|EOA19831.1| hypothetical protein
CARUB_v10000076mg, partial [Capsella rubella]
Length = 1165
Score = 146 bits (369), Expect = 3e-33
Identities = 64/138 (46%), Positives = 99/138 (71%), Gaps = 1/138 (0%)
Frame = -2
Query: 419 NSVLAIEIATERKNWKSRGSGRVQFETLQVKSTAILLSSQDQLVFKGNNLSISETFEDLV 240
++V AIEI T R+NWK R RVQF TL+VKS A LLSSQ +L+FK +NL +SE ++D++
Sbjct: 68 DTVFAIEIPTTRENWKPRDFARVQFTTLEVKSRAQLLSSQSKLLFKTHNLRLSEAYDDII 127
Query: 239 IRPIEAKHRVNNGVLHAGF-MVKDDCMCVLETWEAVKVWFMPERKRIEFWVYLGKECYKL 63
RP++ + R+++ VL GF ++ C LE WE V+ W + E++R+EFWV+ +CY++
Sbjct: 128 PRPVDPRKRLDDVVLTVGFPESSEERFCALEKWEGVRCWILEEKRRVEFWVWESGDCYRI 187
Query: 62 EIHFDDVLEAFGCCLGGE 9
E+ F+D++E GCC+ G+
Sbjct: 188 EVRFEDIVETLGCCVNGD 205
>ref|XP_006396953.1| hypothetical protein EUTSA_v10028370mg [Eutrema salsugineum]
gi|557097970|gb|ESQ38406.1| hypothetical protein
EUTSA_v10028370mg [Eutrema salsugineum]
Length = 1124
Score = 145 bits (367), Expect = 4e-33
Identities = 67/140 (47%), Positives = 95/140 (67%), Gaps = 1/140 (0%)
Frame = -2
Query: 419 NSVLAIEIATERKNWKSRGSGRVQFETLQVKSTAILLSSQDQLVFKGNNLSISETFEDLV 240
++V A+EI T R+NWK R RVQF +L+VKS A LLSSQ +L+FK NL ISE ++D++
Sbjct: 35 DTVFALEIPTSRENWKPRDFARVQFTSLEVKSRAHLLSSQSKLLFKSRNLRISEAYDDII 94
Query: 239 IRPIEAKHRVNNGVLHAGFMVKDD-CMCVLETWEAVKVWFMPERKRIEFWVYLGKECYKL 63
RP++ + ++ VL GF D+ C LE WE V+ W + E++R+EFWV G ECYKL
Sbjct: 95 PRPVDPRKMLDGVVLTVGFPEADEGRFCALEKWEGVRCWVIEEKRRVEFWVCDGGECYKL 154
Query: 62 EIHFDDVLEAFGCCLGGEEQ 3
E+ F+D++E GCC G +
Sbjct: 155 EVRFEDIVETVGCCFNGASE 174
>ref|NP_192851.1| RNA-dependent RNA polymerase 2 [Arabidopsis thaliana]
gi|75318859|sp|O82504.1|RDR2_ARATH RecName:
Full=RNA-dependent RNA polymerase 2; Short=AtRDRP2;
AltName: Full=Protein SILENCING MOVEMENT DEFICIENT 1;
AltName: Full=RNA-directed RNA polymerase 2
gi|3600048|gb|AAC35535.1| similar to hypothetical
proteins in Schizosaccharomyces pombe (GB:Z98533) and C.
elegans (GB:Z48334 and Z78419) [Arabidopsis thaliana]
gi|4850292|emb|CAB43048.1| putative RNA-directed RNA
polymerase [Arabidopsis thaliana]
gi|7267812|emb|CAB81214.1| putative RNA-directed RNA
polymerase [Arabidopsis thaliana]
gi|332657576|gb|AEE82976.1| RNA-dependent RNA polymerase
2 [Arabidopsis thaliana]
Length = 1133
Score = 144 bits (363), Expect = 1e-32
Identities = 63/138 (45%), Positives = 97/138 (70%), Gaps = 1/138 (0%)
Frame = -2
Query: 419 NSVLAIEIATERKNWKSRGSGRVQFETLQVKSTAILLSSQDQLVFKGNNLSISETFEDLV 240
++V A+EI T R NWK R RVQF TL+VKS A LLSSQ +L+FK +NL +SE ++D++
Sbjct: 37 DTVFALEIPTTRDNWKPRDFARVQFTTLEVKSRAQLLSSQSKLLFKTHNLRLSEAYDDII 96
Query: 239 IRPIEAKHRVNNGVLHAGFMVKDD-CMCVLETWEAVKVWFMPERKRIEFWVYLGKECYKL 63
RP++ + R+++ VL GF D+ C LE W+ V+ W + E++R+EFWV+ +CYK+
Sbjct: 97 PRPVDPRKRLDDIVLTVGFPESDEKRFCALEKWDGVRCWILTEKRRVEFWVWESGDCYKI 156
Query: 62 EIHFDDVLEAFGCCLGGE 9
E+ F+D++E CC+ G+
Sbjct: 157 EVRFEDIIETLSCCVNGD 174
>ref|XP_006579560.1| PREDICTED: RNA-dependent RNA polymerase 2-like isoform X1 [Glycine
max]
Length = 1121
Score = 144 bits (362), Expect = 2e-32
Identities = 68/135 (50%), Positives = 97/135 (71%)
Frame = -2
Query: 419 NSVLAIEIATERKNWKSRGSGRVQFETLQVKSTAILLSSQDQLVFKGNNLSISETFEDLV 240
++V A+EI ++ NWKSRG GRVQFETL +S A+ LS + L+F + L +SET D++
Sbjct: 38 STVFALEIFSDNPNWKSRGFGRVQFETLDARSRALSLSQLNHLLFHRHFLRLSETDADII 97
Query: 239 IRPIEAKHRVNNGVLHAGFMVKDDCMCVLETWEAVKVWFMPERKRIEFWVYLGKECYKLE 60
RP +HR++NGVL+AGF++ D M VLE+WE V W +P RKR++FWV+ +CY+LE
Sbjct: 98 FRP---QHRLHNGVLYAGFVLSDHRMSVLESWEGVAGWVLPLRKRLDFWVWHNGDCYRLE 154
Query: 59 IHFDDVLEAFGCCLG 15
F+D+LE+ G CLG
Sbjct: 155 FLFEDILESHGYCLG 169
>ref|XP_003608944.1| Rna-dependent RNA polymerase [Medicago truncatula]
gi|355509999|gb|AES91141.1| Rna-dependent RNA polymerase
[Medicago truncatula]
Length = 1308
Score = 144 bits (362), Expect = 2e-32
Identities = 64/133 (48%), Positives = 95/133 (71%)
Frame = -2
Query: 419 NSVLAIEIATERKNWKSRGSGRVQFETLQVKSTAILLSSQDQLVFKGNNLSISETFEDLV 240
+SV A+EI ++ NWKSRG GRVQFETL+ KS A+ L+ +L+ + L + + +D++
Sbjct: 36 SSVFALEIFSDYTNWKSRGVGRVQFETLEAKSKALTLAENKKLLLSSHFLCLDASSDDII 95
Query: 239 IRPIEAKHRVNNGVLHAGFMVKDDCMCVLETWEAVKVWFMPERKRIEFWVYLGKECYKLE 60
RP ++R+NNG L+AGF + DCM VL++WE V+ W MPER+R++FWV G +C+KLE
Sbjct: 96 PRPALPRNRINNGALYAGFPIGPDCMSVLQSWEGVRGWVMPERQRLDFWVTHGDQCFKLE 155
Query: 59 IHFDDVLEAFGCC 21
I F+++LE G C
Sbjct: 156 IPFENILECDGYC 168
>ref|XP_002872551.1| RNA-dependent RNA polymerase 2 [Arabidopsis lyrata subsp. lyrata]
gi|297318388|gb|EFH48810.1| RNA-dependent RNA polymerase
2 [Arabidopsis lyrata subsp. lyrata]
Length = 1134
Score = 144 bits (362), Expect = 2e-32
Identities = 64/138 (46%), Positives = 97/138 (70%), Gaps = 1/138 (0%)
Frame = -2
Query: 419 NSVLAIEIATERKNWKSRGSGRVQFETLQVKSTAILLSSQDQLVFKGNNLSISETFEDLV 240
++V A+EI T R NWK R RVQF TL+VKS A LLSSQ +L+FK +NL +SE ++D++
Sbjct: 37 DTVFALEILTTRDNWKPRDFARVQFTTLEVKSRAQLLSSQSKLLFKTHNLRLSEAYDDII 96
Query: 239 IRPIEAKHRVNNGVLHAGFMVKDD-CMCVLETWEAVKVWFMPERKRIEFWVYLGKECYKL 63
RP++ + R+++ VL GF D+ C LE W+ V+ W + E++R+EFWV+ ECYK+
Sbjct: 97 PRPVDPRRRLDDIVLTVGFPESDEKRFCALEKWDGVRCWILEEKRRLEFWVWENGECYKI 156
Query: 62 EIHFDDVLEAFGCCLGGE 9
E+ F+D++E CC+ G+
Sbjct: 157 EVRFEDIVETLCCCVNGD 174