BLASTX nr result
ID: Paeonia22_contig00035557
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia22_contig00035557
(785 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali... 54 2e-11
ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661... 52 5e-09
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta... 44 6e-08
ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663... 43 6e-08
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 45 1e-07
gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00... 41 3e-07
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip... 43 1e-06
gb|ABD96948.1| hypothetical protein [Cleome spinosa] 41 2e-06
>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|20197043|gb|AAM14892.1| putative reverse transcriptase
[Arabidopsis thaliana]
Length = 1412
Score = 53.5 bits (127), Expect(2) = 2e-11
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Frame = +3
Query: 48 VGLTHLCFVDDLSIFTKGDIHSVGLMMGVLEQFSMMFGLNVNAAKSHVHW--IQGC*QAT 221
+GLTHLCF DD+ +F+ G HS+ ++ + + F+ GLN++ KS + I A+
Sbjct: 951 MGLTHLCFADDIMVFSAGSAHSLEGVLAIFKDFAAFSGLNISLEKSTLFMASISSETCAS 1010
Query: 222 ILGRLRMEEHSLRVKY 269
IL R + SL V+Y
Sbjct: 1011 ILARFPFDSGSLPVRY 1026
Score = 42.0 bits (97), Expect(2) = 2e-11
Identities = 20/46 (43%), Positives = 31/46 (67%)
Frame = +1
Query: 307 PLLERVTNRIRSWASKQLSYAGRVGLIKSMIMSSGLLMLYACFIPK 444
PLLE++ +RI SW ++ LSYAGR+ L+ S+I S + A +P+
Sbjct: 1043 PLLEKIRSRISSWKNRFLSYAGRLQLLNSVISSLTKFWISAFRLPR 1088
>ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661523 [Glycine max]
Length = 947
Score = 52.0 bits (123), Expect(2) = 5e-09
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Frame = +3
Query: 42 DRVGLTHLCFVDDLSIFTKGDIHSVGLMMGVLEQFSMMFGLNVNAAKSHVHW--IQGC*Q 215
+++G+THL F DD+ +F +GD+ SV +M+ V+ +FS GL VN K +++ + G +
Sbjct: 507 EKLGITHLTFADDVLLFCRGDVMSVEMMLHVINKFSATTGLVVNPNKCRIYFGGVDGTTK 566
Query: 216 ATILGRLRMEEHSLRVKY 269
I EE L V+Y
Sbjct: 567 NKIQQISSYEEGQLPVRY 584
Score = 35.4 bits (80), Expect(2) = 5e-09
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +1
Query: 307 PLLERVTNRIRSWASKQLSYAGRVGLIKSMI 399
PL++++T RIR W SK L+ GRV ++ I
Sbjct: 601 PLIDKITTRIRHWTSKLLNMTGRVQMVNCTI 631
>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1352
Score = 43.5 bits (101), Expect(2) = 6e-08
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Frame = +3
Query: 48 VGLTHLCFVDDLSIFTKGDIHSVGLMMGVLEQFSMMFGLNVNAAKSHVHW--IQGC*QAT 221
+ LTHLCF DD+ +F+ G S+ + + E+F+ M L ++ KS + I + +
Sbjct: 843 MNLTHLCFADDIMVFSDGTSKSIQGTLAIFEKFAAMSWLKISLEKSTIFMAGISPNAKTS 902
Query: 222 ILGRLRMEEHSLRVKY 269
IL + E +L VKY
Sbjct: 903 ILQQFPFELGTLPVKY 918
Score = 40.4 bits (93), Expect(2) = 6e-08
Identities = 20/46 (43%), Positives = 30/46 (65%)
Frame = +1
Query: 307 PLLERVTNRIRSWASKQLSYAGRVGLIKSMIMSSGLLMLYACFIPK 444
PL+E++ RI SW ++ LS+AGR+ LIKS++ S L +PK
Sbjct: 935 PLVEKIRARITSWTNRFLSFAGRLQLIKSVLSSITNFWLSVFRLPK 980
>ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663533 [Glycine max]
Length = 514
Score = 42.7 bits (99), Expect(2) = 6e-08
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = +3
Query: 42 DRVGLTHLCFVDDLSIFTKGDIHSVGLMMGVLEQFSMMFGLNVNAAKSHV 191
+R+G+THL F DD+ + +GD S+ +++ FS GL +N AK V
Sbjct: 168 ERLGITHLSFADDVFLLCRGDKKSIKMIIKAFSFFSKSTGLQINPAKCKV 217
Score = 41.2 bits (95), Expect(2) = 6e-08
Identities = 20/54 (37%), Positives = 34/54 (62%)
Frame = +1
Query: 283 HYFLA**NPLLERVTNRIRSWASKQLSYAGRVGLIKSMIMSSGLLMLYACFIPK 444
H++L PL+E++ +IR W+SK LS AGR+ L++S+I + + +PK
Sbjct: 258 HHYL----PLVEKIVGKIRHWSSKLLSIAGRIQLVRSIITAIAQYWMSVFPMPK 307
>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1114
Score = 44.7 bits (104), Expect(2) = 1e-07
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +3
Query: 42 DRVGLTHLCFVDDLSIFTKGDIHSVGLMMGVLEQFSMMFGLNVNAAKSHVHWIQGC*QAT 221
+R+ LTHL F DDL +F + D S+ +M FS GL + KS +++ C +
Sbjct: 682 ERIKLTHLMFADDLLMFARADASSISKIMAAFNSFSKASGLQASIEKSCIYFGGVCHEEA 741
Query: 222 --ILGRLRMEEHSLRVKY 269
+ R++M SL +Y
Sbjct: 742 EQLADRIQMPIGSLPFRY 759
Score = 38.1 bits (87), Expect(2) = 1e-07
Identities = 14/33 (42%), Positives = 25/33 (75%)
Frame = +1
Query: 307 PLLERVTNRIRSWASKQLSYAGRVGLIKSMIMS 405
PL++++T R + W + LSYAGR+ L+K+++ S
Sbjct: 776 PLIDKITTRAQGWVAHLLSYAGRLQLVKTILYS 808
>gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00078 [Arabidopsis
thaliana]
Length = 1253
Score = 40.8 bits (94), Expect(2) = 3e-07
Identities = 21/37 (56%), Positives = 28/37 (75%)
Frame = +1
Query: 307 PLLERVTNRIRSWASKQLSYAGRVGLIKSMIMSSGLL 417
PLLE++ R RSW+ K LS+AGRV LI S+I SG++
Sbjct: 714 PLLEKLAKRFRSWSVKCLSFAGRVQLIASVI--SGII 748
Score = 40.4 bits (93), Expect(2) = 3e-07
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 16/97 (16%)
Frame = +3
Query: 9 LTRAIFNSILNDR--------------VGLTHLCFVDDLSIFTKGDIHSVGLMMGVLEQF 146
L +F+S+LN R + ++HL F DD+ +F G S+ + LE F
Sbjct: 616 LAMEVFSSLLNSRFQAGYIHYHPKTSPLSISHLMFADDIMVFFDGGSSSLHGISEALEDF 675
Query: 147 SMMFGLNVNAAKSHVH--WIQGC*QATILGRLRMEEH 251
+ GL +N K+H++ + +TI +LR+ E+
Sbjct: 676 AFWSGLVLNREKTHLYLAGLDRIEASTIARKLRIAEY 712
>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
72.31) [Arabidopsis thaliana]
Length = 928
Score = 42.7 bits (99), Expect(2) = 1e-06
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Frame = +3
Query: 48 VGLTHLCFVDDLSIFTKGDIHSVGLMMGVLEQFSMMFGLNVNAAKS--HVHWIQGC*QAT 221
+GLTHL F DDL I + G + S+ ++ VL +F+ GL ++ KS ++ +Q
Sbjct: 584 IGLTHLSFADDLMILSDGKVRSIDGIVKVLYEFAKWSGLKISMEKSTMYLAGVQASVYQE 643
Query: 222 ILGRLRMEEHSLRVKY 269
I+ + + L V+Y
Sbjct: 644 IVQKFSFDVGKLPVRY 659
Score = 37.0 bits (84), Expect(2) = 1e-06
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +1
Query: 307 PLLERVTNRIRSWASKQLSYAGRVGLIKSMIMSSGLLMLYACFIPK 444
PL+E++ +I +W S+ LS+AGR+ LI S + S + A +P+
Sbjct: 676 PLIEQLRKKIEAWTSRFLSFAGRLNLISSTLWSICNFWMAAFRLPR 721
>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
Length = 539
Score = 40.8 bits (94), Expect(2) = 2e-06
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +3
Query: 54 LTHLCFVDDLSIFTKGDIHSVGLMMGVLEQFSMMFGLNVNAAKSHV--HWIQGC*QATIL 227
+THL F DD+ IFT G+ S+ + L+ FS GL +N K+ + + G +T+
Sbjct: 145 ITHLAFADDIMIFTSGETRSLLEVKNTLDSFSRASGLYLNTEKTEIFLRGLNGTEASTLC 204
Query: 228 GRLRMEEHSLRVKY 269
+ L V+Y
Sbjct: 205 AVIGFTRGYLPVRY 218
Score = 38.1 bits (87), Expect(2) = 2e-06
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Frame = +1
Query: 307 PLLERVTNRIRSWASKQLSYAGRVGL----IKSMIMSSGLLMLYACFIPK 444
PLL+RV +I SW ++ LSYAGR+ L I M+ + G++ + F K
Sbjct: 235 PLLDRVKAKINSWTTRYLSYAGRLQLVGTVIYGMVNAWGMIFMLPKFFTK 284