BLASTX nr result
ID: Paeonia22_contig00035292
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia22_contig00035292
(289 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group... 86 2e-26
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 87 3e-26
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 87 3e-26
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 87 4e-26
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera] 98 7e-26
gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein ... 84 1e-25
gb|AAL31093.1|AC091749_22 putative retrotransposon-related prote... 83 2e-25
emb|CAE02229.2| OSJNBb0015C06.7 [Oryza sativa Japonica Group] 86 2e-25
gb|ABA93686.1| retrotransposon protein, putative, Ty1-copia subc... 88 2e-25
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 84 3e-25
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 86 3e-25
gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subc... 83 6e-25
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707... 82 3e-24
gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa... 86 4e-24
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 82 8e-24
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 82 8e-24
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 77 1e-23
gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subc... 81 1e-23
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group] 81 1e-23
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 81 1e-23
>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
gi|48475101|gb|AAT44170.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1175
Score = 86.3 bits (212), Expect(2) = 2e-26
Identities = 41/69 (59%), Positives = 49/69 (71%)
Frame = -2
Query: 207 LHSFRSGPSPVTSHGGGRYMLTFIDDFSRKVWIFILKSKDDVFIKFK*WKAMIEKQTKKS 28
+H+ GPS S GG RYMLT IDD+SRKVW + LK KDD F FK WK MI++QT+K
Sbjct: 383 VHADLWGPSRKPSLGGARYMLTIIDDYSRKVWPYFLKHKDDTFAAFKEWKVMIKRQTEKE 442
Query: 27 IKRLRIDNG 1
+K LR DNG
Sbjct: 443 VKVLRTDNG 451
Score = 58.5 bits (140), Expect(2) = 2e-26
Identities = 23/32 (71%), Positives = 27/32 (84%)
Frame = -3
Query: 287 FYEHCVYGKHCRVKFTTGIHRTKGTLDYIHSD 192
F EHCV+GKH RVKF T +HRTKG LDY+H+D
Sbjct: 355 FCEHCVFGKHKRVKFNTSVHRTKGILDYVHAD 386
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 87.4 bits (215), Expect(2) = 3e-26
Identities = 41/69 (59%), Positives = 49/69 (71%)
Frame = -2
Query: 207 LHSFRSGPSPVTSHGGGRYMLTFIDDFSRKVWIFILKSKDDVFIKFK*WKAMIEKQTKKS 28
+H+ GPS S GG RYMLT IDD+SRKVW + LK KDD F FK WK MIE+QT++
Sbjct: 487 VHADLWGPSKKPSLGGARYMLTIIDDYSRKVWPYFLKHKDDTFTAFKNWKVMIERQTERK 546
Query: 27 IKRLRIDNG 1
+K LR DNG
Sbjct: 547 VKLLRTDNG 555
Score = 56.6 bits (135), Expect(2) = 3e-26
Identities = 21/32 (65%), Positives = 27/32 (84%)
Frame = -3
Query: 287 FYEHCVYGKHCRVKFTTGIHRTKGTLDYIHSD 192
F EHC++GKH RV+F T +H TKGTLDY+H+D
Sbjct: 459 FCEHCIFGKHKRVQFNTSVHTTKGTLDYVHAD 490
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 87.4 bits (215), Expect(2) = 3e-26
Identities = 41/69 (59%), Positives = 49/69 (71%)
Frame = -2
Query: 207 LHSFRSGPSPVTSHGGGRYMLTFIDDFSRKVWIFILKSKDDVFIKFK*WKAMIEKQTKKS 28
+H+ GPS S GG RYMLT IDD+SRKVW + LK KDD F FK WK MIE+QT++
Sbjct: 487 VHADLWGPSKKPSLGGARYMLTIIDDYSRKVWPYFLKHKDDTFTAFKNWKVMIERQTERK 546
Query: 27 IKRLRIDNG 1
+K LR DNG
Sbjct: 547 VKLLRTDNG 555
Score = 56.6 bits (135), Expect(2) = 3e-26
Identities = 21/32 (65%), Positives = 27/32 (84%)
Frame = -3
Query: 287 FYEHCVYGKHCRVKFTTGIHRTKGTLDYIHSD 192
F EHC++GKH RV+F T +H TKGTLDY+H+D
Sbjct: 459 FCEHCIFGKHKRVQFNTSVHTTKGTLDYVHAD 490
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 87.0 bits (214), Expect(2) = 4e-26
Identities = 41/69 (59%), Positives = 49/69 (71%)
Frame = -2
Query: 207 LHSFRSGPSPVTSHGGGRYMLTFIDDFSRKVWIFILKSKDDVFIKFK*WKAMIEKQTKKS 28
+H+ GPS S GG RYMLT IDD+SRKVW + LK KDD F FK WK MIE+QT++
Sbjct: 487 VHADLWGPSKKPSLGGARYMLTVIDDYSRKVWPYFLKHKDDTFTAFKNWKVMIERQTERK 546
Query: 27 IKRLRIDNG 1
+K LR DNG
Sbjct: 547 VKLLRTDNG 555
Score = 56.6 bits (135), Expect(2) = 4e-26
Identities = 21/32 (65%), Positives = 27/32 (84%)
Frame = -3
Query: 287 FYEHCVYGKHCRVKFTTGIHRTKGTLDYIHSD 192
F EHC++GKH RV+F T +H TKGTLDY+H+D
Sbjct: 459 FCEHCIFGKHKRVQFNTSVHTTKGTLDYVHAD 490
>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
Length = 1643
Score = 98.2 bits (243), Expect(2) = 7e-26
Identities = 45/69 (65%), Positives = 54/69 (78%)
Frame = -2
Query: 207 LHSFRSGPSPVTSHGGGRYMLTFIDDFSRKVWIFILKSKDDVFIKFK*WKAMIEKQTKKS 28
+HS GPSPV SH G RY +TFIDDFSRKVW++ LK+KD+VF KFK WK M+EK+T K
Sbjct: 807 IHSDLWGPSPVESHSGCRYYVTFIDDFSRKVWVYFLKAKDEVFGKFKEWKTMVEKRTGKV 866
Query: 27 IKRLRIDNG 1
+K LR DNG
Sbjct: 867 VKTLRTDNG 875
Score = 44.7 bits (104), Expect(2) = 7e-26
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = -3
Query: 287 FYEHCVYGKHCRVKFTTGIHRTKGTLDYIHSD 192
F E CV GK RVKF+ G H T G L+YIHSD
Sbjct: 779 FCETCVMGKQRRVKFSMGSHTTNGVLEYIHSD 810
>gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
gi|108708632|gb|ABF96427.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1326
Score = 83.6 bits (205), Expect(2) = 1e-25
Identities = 40/69 (57%), Positives = 47/69 (68%)
Frame = -2
Query: 207 LHSFRSGPSPVTSHGGGRYMLTFIDDFSRKVWIFILKSKDDVFIKFK*WKAMIEKQTKKS 28
+H+ GPS GG RYMLT IDD+SRKVW + LK KDD F FK WK IE+QT+K
Sbjct: 488 VHTDLWGPSRKAYLGGARYMLTIIDDYSRKVWPYFLKHKDDTFAAFKEWKVRIERQTEKE 547
Query: 27 IKRLRIDNG 1
+K LR DNG
Sbjct: 548 VKVLRTDNG 556
Score = 58.5 bits (140), Expect(2) = 1e-25
Identities = 23/32 (71%), Positives = 27/32 (84%)
Frame = -3
Query: 287 FYEHCVYGKHCRVKFTTGIHRTKGTLDYIHSD 192
F EHCV+GKH RVKF T +HRTKG LDY+H+D
Sbjct: 460 FCEHCVFGKHKRVKFNTSVHRTKGILDYVHTD 491
>gb|AAL31093.1|AC091749_22 putative retrotransposon-related protein [Oryza sativa Japonica
Group] gi|22655747|gb|AAN04164.1| Putative
retrotransposon protein [Oryza sativa Japonica Group]
gi|31431214|gb|AAP53029.1| retrotransposon protein,
putative, Ty1-copia subclass, expressed [Oryza sativa
Japonica Group]
Length = 1229
Score = 82.8 bits (203), Expect(2) = 2e-25
Identities = 40/69 (57%), Positives = 47/69 (68%)
Frame = -2
Query: 207 LHSFRSGPSPVTSHGGGRYMLTFIDDFSRKVWIFILKSKDDVFIKFK*WKAMIEKQTKKS 28
+H+ GPS S GG YMLT IDD+SRKVW + LK KDD F FK WK MIE+Q +K
Sbjct: 485 VHADLWGPSRKPSLGGACYMLTIIDDYSRKVWPYFLKHKDDTFAAFKEWKVMIERQAEKE 544
Query: 27 IKRLRIDNG 1
+K LR DNG
Sbjct: 545 VKVLRTDNG 553
Score = 58.5 bits (140), Expect(2) = 2e-25
Identities = 23/32 (71%), Positives = 27/32 (84%)
Frame = -3
Query: 287 FYEHCVYGKHCRVKFTTGIHRTKGTLDYIHSD 192
F EHCV+GKH RVKF T +HRTKG LDY+H+D
Sbjct: 457 FCEHCVFGKHKRVKFNTSVHRTKGILDYVHAD 488
>emb|CAE02229.2| OSJNBb0015C06.7 [Oryza sativa Japonica Group]
Length = 977
Score = 85.5 bits (210), Expect(2) = 2e-25
Identities = 40/63 (63%), Positives = 45/63 (71%)
Frame = -2
Query: 189 GPSPVTSHGGGRYMLTFIDDFSRKVWIFILKSKDDVFIKFK*WKAMIEKQTKKSIKRLRI 10
GPS S G RYMLT IDD+SRKVW + LK KDD F+ FK WK IE+QTKK +K LR
Sbjct: 315 GPSRKPSLSGARYMLTIIDDYSRKVWPYFLKHKDDTFVAFKEWKVTIERQTKKEVKVLRT 374
Query: 9 DNG 1
DNG
Sbjct: 375 DNG 377
Score = 55.8 bits (133), Expect(2) = 2e-25
Identities = 23/32 (71%), Positives = 26/32 (81%)
Frame = -3
Query: 287 FYEHCVYGKHCRVKFTTGIHRTKGTLDYIHSD 192
F EHCV+GKH RVKF T IHRTKG LDY+ +D
Sbjct: 281 FCEHCVFGKHKRVKFNTSIHRTKGILDYVQAD 312
>gb|ABA93686.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 680
Score = 88.2 bits (217), Expect(2) = 2e-25
Identities = 41/69 (59%), Positives = 51/69 (73%)
Frame = -2
Query: 207 LHSFRSGPSPVTSHGGGRYMLTFIDDFSRKVWIFILKSKDDVFIKFK*WKAMIEKQTKKS 28
LH+ GPS S+G RYMLT IDD+SRKVW + LK+KDD F+ FK WK MI++Q +K
Sbjct: 164 LHADLWGPSRKPSNGCARYMLTIIDDYSRKVWTYFLKNKDDTFVAFKEWKVMIKRQIEKE 223
Query: 27 IKRLRIDNG 1
+K LRIDNG
Sbjct: 224 VKVLRIDNG 232
Score = 53.1 bits (126), Expect(2) = 2e-25
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = -3
Query: 281 EHCVYGKHCRVKFTTGIHRTKGTLDYIHSD 192
EHCV+GK RVKF T +HRTKG LDY+H+D
Sbjct: 138 EHCVFGKDKRVKFNTSVHRTKGILDYLHAD 167
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
Length = 1335
Score = 84.3 bits (207), Expect(2) = 3e-25
Identities = 40/69 (57%), Positives = 48/69 (69%)
Frame = -2
Query: 207 LHSFRSGPSPVTSHGGGRYMLTFIDDFSRKVWIFILKSKDDVFIKFK*WKAMIEKQTKKS 28
+H+ GPS S GG RYMLT IDD+SRKVW + LK KDD F FK WK MIE+QT++
Sbjct: 489 VHADLWGPSKKPSLGGARYMLTIIDDYSRKVWPYFLKHKDDTFTAFKNWKVMIERQTERK 548
Query: 27 IKRLRIDNG 1
+K L DNG
Sbjct: 549 VKLLCTDNG 557
Score = 56.6 bits (135), Expect(2) = 3e-25
Identities = 21/32 (65%), Positives = 27/32 (84%)
Frame = -3
Query: 287 FYEHCVYGKHCRVKFTTGIHRTKGTLDYIHSD 192
F EHC++GKH RV+F T +H TKGTLDY+H+D
Sbjct: 461 FCEHCIFGKHKRVQFNTSVHTTKGTLDYVHAD 492
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 85.5 bits (210), Expect(2) = 3e-25
Identities = 41/68 (60%), Positives = 48/68 (70%)
Frame = -2
Query: 207 LHSFRSGPSPVTSHGGGRYMLTFIDDFSRKVWIFILKSKDDVFIKFK*WKAMIEKQTKKS 28
+H+ GPS S GG RYMLT IDD+SRKVW + LK KDD F FK WK MIE+QT+K
Sbjct: 488 VHADLWGPSRKPSLGGARYMLTIIDDYSRKVWPYFLKHKDDTFAAFKEWKVMIERQTEKE 547
Query: 27 IKRLRIDN 4
+K LR DN
Sbjct: 548 VKVLRTDN 555
Score = 55.5 bits (132), Expect(2) = 3e-25
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = -3
Query: 287 FYEHCVYGKHCRVKFTTGIHRTKGTLDYIHSD 192
F E CV+GKH RVKF T +HRTKG LDY+H+D
Sbjct: 460 FCERCVFGKHKRVKFNTSVHRTKGILDYVHAD 491
>gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1156
Score = 82.8 bits (203), Expect(2) = 6e-25
Identities = 40/69 (57%), Positives = 48/69 (69%)
Frame = -2
Query: 207 LHSFRSGPSPVTSHGGGRYMLTFIDDFSRKVWIFILKSKDDVFIKFK*WKAMIEKQTKKS 28
+H+ GPS S GG YMLT IDD+SRKVW + LK KDD F FK WK MIE+QT+K
Sbjct: 428 VHADLWGPSRKPSLGGACYMLTIIDDYSRKVWPYFLKHKDDTFAAFKEWKVMIERQTEKE 487
Query: 27 IKRLRIDNG 1
+K LR D+G
Sbjct: 488 VKVLRTDSG 496
Score = 57.0 bits (136), Expect(2) = 6e-25
Identities = 22/32 (68%), Positives = 27/32 (84%)
Frame = -3
Query: 287 FYEHCVYGKHCRVKFTTGIHRTKGTLDYIHSD 192
F EHCV+GKH RVKF T +HR+KG LDY+H+D
Sbjct: 400 FCEHCVFGKHKRVKFNTSVHRSKGILDYVHAD 431
>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
Length = 1773
Score = 81.6 bits (200), Expect(2) = 3e-24
Identities = 36/69 (52%), Positives = 49/69 (71%)
Frame = -2
Query: 207 LHSFRSGPSPVTSHGGGRYMLTFIDDFSRKVWIFILKSKDDVFIKFK*WKAMIEKQTKKS 28
+HS GP+ S GG RYM+T +DD+SRKVW + LK K + F+ FK WK M+E+QT++
Sbjct: 434 VHSDLWGPARKRSFGGARYMMTIVDDYSRKVWPYFLKHKFEAFLVFKEWKTMVERQTERK 493
Query: 27 IKRLRIDNG 1
+K LR DNG
Sbjct: 494 VKVLRTDNG 502
Score = 55.8 bits (133), Expect(2) = 3e-24
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = -3
Query: 287 FYEHCVYGKHCRVKFTTGIHRTKGTLDYIHSD 192
F EHC++GKH RVKFTT H T+G LDY+HSD
Sbjct: 406 FCEHCIFGKHKRVKFTTSTHTTEGILDYVHSD 437
>gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa Japonica Group]
gi|18542925|gb|AAL75759.1| Putative pol polyprotein
[Oryza sativa Japonica Group] gi|31429763|gb|AAP51772.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1005
Score = 86.3 bits (212), Expect(2) = 4e-24
Identities = 42/69 (60%), Positives = 48/69 (69%)
Frame = -2
Query: 207 LHSFRSGPSPVTSHGGGRYMLTFIDDFSRKVWIFILKSKDDVFIKFK*WKAMIEKQTKKS 28
+H+ GPS S GG RYMLT IDD SRKVW + LK KDD F FK WK MIE+QT+K
Sbjct: 225 VHADLWGPSHKPSLGGARYMLTIIDDHSRKVWPYFLKHKDDTFAAFKEWKVMIERQTEKE 284
Query: 27 IKRLRIDNG 1
+K LR DNG
Sbjct: 285 VKVLRTDNG 293
Score = 50.8 bits (120), Expect(2) = 4e-24
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = -3
Query: 287 FYEHCVYGKHCRVKFTTGIHRTKGTLDYIHSD 192
F EHCV+GKH VKF +HR KG LDY+H+D
Sbjct: 197 FCEHCVFGKHKWVKFNISVHRIKGILDYVHAD 228
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 82.0 bits (201), Expect(2) = 8e-24
Identities = 38/69 (55%), Positives = 48/69 (69%)
Frame = -2
Query: 207 LHSFRSGPSPVTSHGGGRYMLTFIDDFSRKVWIFILKSKDDVFIKFK*WKAMIEKQTKKS 28
+HS GP+ TS GG RYM+T +DD+SRKVW + LK K F FK WK M+E+QT+K
Sbjct: 530 VHSDLWGPACKTSFGGARYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTEKK 589
Query: 27 IKRLRIDNG 1
+K LR DNG
Sbjct: 590 VKILRTDNG 598
Score = 53.9 bits (128), Expect(2) = 8e-24
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = -3
Query: 287 FYEHCVYGKHCRVKFTTGIHRTKGTLDYIHSD 192
F EHC++GKH RVKF T H T+G LDY+HSD
Sbjct: 502 FCEHCIFGKHKRVKFNTSTHTTEGILDYVHSD 533
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 82.0 bits (201), Expect(2) = 8e-24
Identities = 38/69 (55%), Positives = 48/69 (69%)
Frame = -2
Query: 207 LHSFRSGPSPVTSHGGGRYMLTFIDDFSRKVWIFILKSKDDVFIKFK*WKAMIEKQTKKS 28
+HS GP+ TS GG RYM+T +DD+SRKVW + LK K F FK WK M+E+QT+K
Sbjct: 530 VHSDLWGPACKTSFGGARYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTEKK 589
Query: 27 IKRLRIDNG 1
+K LR DNG
Sbjct: 590 VKILRTDNG 598
Score = 53.9 bits (128), Expect(2) = 8e-24
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = -3
Query: 287 FYEHCVYGKHCRVKFTTGIHRTKGTLDYIHSD 192
F EHC++GKH RVKF T H T+G LDY+HSD
Sbjct: 502 FCEHCIFGKHKRVKFNTSTHTTEGILDYVHSD 533
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53370655|gb|AAU89150.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710286|gb|ABF98081.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1322
Score = 77.0 bits (188), Expect(2) = 1e-23
Identities = 39/69 (56%), Positives = 46/69 (66%)
Frame = -2
Query: 207 LHSFRSGPSPVTSHGGGRYMLTFIDDFSRKVWIFILKSKDDVFIKFK*WKAMIEKQTKKS 28
+H+ GPS S GG RYMLT IDD+SRK W + LK KDD F FK K MIE+QT+K
Sbjct: 488 VHADLWGPSRKPSLGGARYMLTIIDDYSRKEWPYFLKHKDDTFAAFKERKVMIERQTEKE 547
Query: 27 IKRLRIDNG 1
+K L DNG
Sbjct: 548 VKVLCTDNG 556
Score = 58.5 bits (140), Expect(2) = 1e-23
Identities = 23/32 (71%), Positives = 27/32 (84%)
Frame = -3
Query: 287 FYEHCVYGKHCRVKFTTGIHRTKGTLDYIHSD 192
F EHCV+GKH RVKF T +HRTKG LDY+H+D
Sbjct: 460 FCEHCVFGKHKRVKFNTSVHRTKGILDYVHAD 491
>gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1262
Score = 81.3 bits (199), Expect(2) = 1e-23
Identities = 37/69 (53%), Positives = 48/69 (69%)
Frame = -2
Query: 207 LHSFRSGPSPVTSHGGGRYMLTFIDDFSRKVWIFILKSKDDVFIKFK*WKAMIEKQTKKS 28
+HS GP+ TS GG RYM+T +DD+SRKVW + LK K F FK WK M+E+QT++
Sbjct: 510 VHSDLWGPARKTSFGGARYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERK 569
Query: 27 IKRLRIDNG 1
+K LR DNG
Sbjct: 570 VKILRTDNG 578
Score = 53.9 bits (128), Expect(2) = 1e-23
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = -3
Query: 287 FYEHCVYGKHCRVKFTTGIHRTKGTLDYIHSD 192
F EHC++GKH RVKF T H T+G LDY+HSD
Sbjct: 482 FCEHCIFGKHKRVKFNTSTHTTEGILDYVHSD 513
>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1243
Score = 81.3 bits (199), Expect(2) = 1e-23
Identities = 37/69 (53%), Positives = 48/69 (69%)
Frame = -2
Query: 207 LHSFRSGPSPVTSHGGGRYMLTFIDDFSRKVWIFILKSKDDVFIKFK*WKAMIEKQTKKS 28
+HS GP+ TS GG RYM+T +DD+SRKVW + LK K F FK WK M+E+QT++
Sbjct: 467 VHSDLWGPAHKTSFGGARYMMTIVDDYSRKVWPYFLKHKYQAFDGFKEWKTMVERQTERK 526
Query: 27 IKRLRIDNG 1
+K LR DNG
Sbjct: 527 VKILRTDNG 535
Score = 53.9 bits (128), Expect(2) = 1e-23
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = -3
Query: 287 FYEHCVYGKHCRVKFTTGIHRTKGTLDYIHSD 192
F EHC++GKH RVKF T H T+G LDY+HSD
Sbjct: 439 FCEHCIFGKHKRVKFNTSTHTTEGILDYVHSD 470
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 81.3 bits (199), Expect(2) = 1e-23
Identities = 37/69 (53%), Positives = 48/69 (69%)
Frame = -2
Query: 207 LHSFRSGPSPVTSHGGGRYMLTFIDDFSRKVWIFILKSKDDVFIKFK*WKAMIEKQTKKS 28
+HS GP+ TS GG RYM+T +DD+SRKVW + LK K F FK WK M+E+QT++
Sbjct: 404 VHSDLWGPARKTSFGGARYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERK 463
Query: 27 IKRLRIDNG 1
+K LR DNG
Sbjct: 464 VKILRTDNG 472
Score = 53.9 bits (128), Expect(2) = 1e-23
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = -3
Query: 287 FYEHCVYGKHCRVKFTTGIHRTKGTLDYIHSD 192
F EHC++GKH RVKF T H T+G LDY+HSD
Sbjct: 376 FCEHCIFGKHKRVKFNTSTHTTEGILDYVHSD 407