BLASTX nr result

ID: Paeonia22_contig00034578 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia22_contig00034578
         (378 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67233.1| hypothetical protein VITISV_020021 [Vitis vinifera]    73   5e-11
ref|XP_002280960.2| PREDICTED: DNA topoisomerase 1-like [Vitis v...    72   6e-11
gb|EXC32749.1| DNA topoisomerase 1 [Morus notabilis]                   57   3e-06

>emb|CAN67233.1| hypothetical protein VITISV_020021 [Vitis vinifera]
          Length = 1039

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 49/133 (36%), Positives = 68/133 (51%), Gaps = 7/133 (5%)
 Frame = -1

Query: 378 GNTYEKLSHINYRKGRVSSMMTDSQLKVQRLKNRLDFNHFRHFTDG-------RSQFNGG 220
           G+ +   S IN+RK  + +++ + Q K+ RL    +F+ F   TD        +SQ   G
Sbjct: 54  GDKFGNFSQINFRKIGIPALVNNIQPKILRLNANRNFHIFGSLTDSSRFAVPVQSQLRLG 113

Query: 219 FFHTARPVNVFSCGSLNGSVRFILPYSGAFAKRCFSHVPRVMNKDHNASVGDGKSGGRTF 40
           F +   P+     G+L+  +RF  PY  A AKR FS VPRV NK  N  + DG +   T 
Sbjct: 114 FPNAVTPIY----GTLDIGIRFSSPYYKALAKRPFSQVPRVKNKGDNLGIRDG-TAENTS 168

Query: 39  PFKGFYKHRKRAK 1
            FK F KHRK  K
Sbjct: 169 LFKPFNKHRKWEK 181


>ref|XP_002280960.2| PREDICTED: DNA topoisomerase 1-like [Vitis vinifera]
          Length = 1185

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 49/133 (36%), Positives = 68/133 (51%), Gaps = 7/133 (5%)
 Frame = -1

Query: 378 GNTYEKLSHINYRKGRVSSMMTDSQLKVQRLKNRLDFNHFRHFTDG-------RSQFNGG 220
           G+ +   S IN+RK  + +++ + Q K+ RL    +F+ F   TD        +SQ   G
Sbjct: 54  GDKFGNFSQINFRKIGIPALVNNIQPKILRLNVNRNFHIFGSLTDSSRFAVPVQSQLRLG 113

Query: 219 FFHTARPVNVFSCGSLNGSVRFILPYSGAFAKRCFSHVPRVMNKDHNASVGDGKSGGRTF 40
           F +   P+     G+L+  +RF  PY  A AKR FS VPRV NK  N  + DG +   T 
Sbjct: 114 FPNAVTPIY----GTLDIGIRFSSPYYKALAKRPFSQVPRVKNKGDNLGIRDG-TAENTS 168

Query: 39  PFKGFYKHRKRAK 1
            FK F KHRK  K
Sbjct: 169 LFKPFNKHRKWEK 181


>gb|EXC32749.1| DNA topoisomerase 1 [Morus notabilis]
          Length = 1163

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 40/102 (39%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
 Frame = -1

Query: 303 LKVQRLKNRLDFNHFRHFTDG-RSQFNGGFFHTARPVNVFSCGSLNGSVRFILPYSGAFA 127
           L+ +  K   +F   R F+DG +S    GF +T  PVN FS  S N  V   LP  GAF 
Sbjct: 75  LRTEHTKVGKEFYPLRSFSDGPQSNLRPGFGNTFGPVNNFSYVSFNEGVSSSLPSYGAFT 134

Query: 126 KRCFSHVPRVMNKDHNASVGDGKSGGRTFPFKGFYKHRKRAK 1
           KR FS       K  N    DG+SGG     +   K RK+AK
Sbjct: 135 KRFFS-----QKKLENRGAQDGESGGSASALRMISKRRKQAK 171


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