BLASTX nr result
ID: Paeonia22_contig00034511
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia22_contig00034511
(355 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_005090363.1| DNA-dependent RNA polymerase (mitochondrion)... 100 3e-19
ref|YP_398415.1| orf349 [Triticum aestivum] gi|78675255|dbj|BAE4... 93 4e-17
gb|AHI16397.1| orf349 (mitochondrion) [Triticum turgidum subsp. ... 92 8e-17
gb|AHI16368.1| orf349 (mitochondrion) [Triticum turgidum subsp. ... 92 8e-17
ref|YP_002608352.1| DNA-dependent RNA polymerase [Vitis vinifera... 88 1e-15
gb|EMS66648.1| hypothetical protein TRIUR3_26071 [Triticum urartu] 80 2e-13
gb|AAS15052.1| DNA-directed RNA polymerase [Daucus carota] 74 3e-11
emb|CBJ20686.1| hypothetical protein [Beta vulgaris subsp. marit... 68 1e-09
ref|NP_064021.1| orf670 gene product (mitochondrion) [Beta vulga... 67 2e-09
dbj|BAD66821.1| orf670 [Beta vulgaris subsp. vulgaris] 67 2e-09
gb|AFI44306.1| RNA polymerase (mitochondrion) [Silene vulgaris] 57 2e-06
gb|EMS61822.1| hypothetical protein TRIUR3_06156 [Triticum urartu] 57 4e-06
>ref|YP_005090363.1| DNA-dependent RNA polymerase (mitochondrion) [Phoenix dactylifera]
gi|343478415|gb|AEM43903.1| DNA-dependent RNA polymerase
(mitochondrion) [Phoenix dactylifera]
Length = 875
Score = 100 bits (248), Expect = 3e-19
Identities = 54/141 (38%), Positives = 79/141 (56%), Gaps = 24/141 (17%)
Frame = -2
Query: 354 GMLYNCIQESSVVRVATLIDKLDSTVRTQANILK-------------NPKIDSSKDCDIK 214
G+++NC+++ SVVRV+TL+++LDS VR QA + K +S KD
Sbjct: 67 GLVFNCVRDLSVVRVSTLLEQLDSAVRDQARFMLIKAAGSGKVEGVVTSKAESDKDAVKF 126
Query: 213 QKKG-----------NQFEIGIKLFEFMIERQLIHIDTMAGEGQKAVVKKRGKGYLEYNL 67
KG + IG+ L F++ER LIH+ + + VV K+GKGY+ N
Sbjct: 127 DSKGATKKGKVKVTRTHYAIGVHLVNFLVERGLIHLSSEVSFTEVPVVNKKGKGYIPINC 186
Query: 66 FAVCNFELRHLPMKLNLPMVC 4
+A+CNF+ LP+KLNLPMVC
Sbjct: 187 YAMCNFDFSLLPIKLNLPMVC 207
>ref|YP_398415.1| orf349 [Triticum aestivum] gi|78675255|dbj|BAE47680.1| orf349
[Triticum aestivum]
Length = 349
Score = 92.8 bits (229), Expect = 4e-17
Identities = 53/142 (37%), Positives = 83/142 (58%), Gaps = 24/142 (16%)
Frame = -2
Query: 354 GMLYNCIQESSVVRVATLIDKLDSTVRTQANILK-------------NPKIDSSKDC--- 223
G+++N +QESS V+ A ID+L+STVR QA L+ K++S KD
Sbjct: 177 GLVFNTLQESSAVKAARFIDQLNSTVREQARFLQYKAPGSGKVEAVLTSKVESVKDVVQP 236
Query: 222 ------DIKQKKGNQFEIGIKLFEFMIERQLIHIDTMAGEGQK--AVVKKRGKGYLEYNL 67
+ K+K ++IG L +FMIER ++HI T G ++ +V K+G+GY+E +
Sbjct: 237 KGASKKEKKKKMQCHYDIGKYLLQFMIERNVLHISTDRGVTKEDPVLVLKKGQGYIENSC 296
Query: 66 FAVCNFELRHLPMKLNLPMVCQ 1
+ +CN + LP+KLNLPM+C+
Sbjct: 297 YVMCNLNINLLPIKLNLPMLCK 318
>gb|AHI16397.1| orf349 (mitochondrion) [Triticum turgidum subsp. durum]
Length = 349
Score = 92.0 bits (227), Expect = 8e-17
Identities = 53/142 (37%), Positives = 83/142 (58%), Gaps = 24/142 (16%)
Frame = -2
Query: 354 GMLYNCIQESSVVRVATLIDKLDSTVRTQANILK-------------NPKIDSSKDC--- 223
G+++N +QESS V+ A ID+L+STVR QA L+ K++S KD
Sbjct: 177 GLVFNTLQESSAVKAARFIDQLNSTVREQARFLQYKAPGSGKVEAVLTSKVESVKDVVQP 236
Query: 222 ------DIKQKKGNQFEIGIKLFEFMIERQLIHIDTMAGEGQK--AVVKKRGKGYLEYNL 67
+ K+K ++IG L +FMIER ++HI T G ++ +V K+G+GY+E +
Sbjct: 237 KGASKKEKKKKIQCHYDIGKYLLQFMIERNVLHISTDRGVTKEDPVLVLKKGQGYIENSC 296
Query: 66 FAVCNFELRHLPMKLNLPMVCQ 1
+ +CN + LP+KLNLPM+C+
Sbjct: 297 YVMCNLNINLLPIKLNLPMLCK 318
>gb|AHI16368.1| orf349 (mitochondrion) [Triticum turgidum subsp. durum]
Length = 349
Score = 92.0 bits (227), Expect = 8e-17
Identities = 53/142 (37%), Positives = 83/142 (58%), Gaps = 24/142 (16%)
Frame = -2
Query: 354 GMLYNCIQESSVVRVATLIDKLDSTVRTQANILK-------------NPKIDSSKDC--- 223
G+++N +QESS V+ A ID+L+STVR QA L+ K++S KD
Sbjct: 177 GLVFNTLQESSAVKAARFIDQLNSTVREQARFLQYKAPGSGKVEAVLTSKVESVKDVVQP 236
Query: 222 ------DIKQKKGNQFEIGIKLFEFMIERQLIHIDTMAGEGQK--AVVKKRGKGYLEYNL 67
+ K+K ++IG L +FMIER ++HI T G ++ +V K+G+GY+E +
Sbjct: 237 KGASKKEKKKKIQCHYDIGKYLLQFMIERNVLHISTDRGVTKEDPVLVLKKGQGYIENSC 296
Query: 66 FAVCNFELRHLPMKLNLPMVCQ 1
+ +CN + LP+KLNLPM+C+
Sbjct: 297 YVMCNLNINLLPIKLNLPMLCK 318
>ref|YP_002608352.1| DNA-dependent RNA polymerase [Vitis vinifera]
gi|209954148|emb|CAQ77581.1| DNA-dependent RNA
polymerase. This is a family of single chain RNA
polymerases; pfam00940 [Vitis vinifera]
gi|239764752|gb|ACS15222.1| DNA-dependent RNA polymerase
[Vitis vinifera]
Length = 975
Score = 88.2 bits (217), Expect = 1e-15
Identities = 49/138 (35%), Positives = 77/138 (55%), Gaps = 20/138 (14%)
Frame = -2
Query: 354 GMLYNCIQESSVVRVATLIDKLDSTVRTQANILK-------------------NPKIDSS 232
G+L+NCIQE VRV+TLI+ LD+ VR+QA +LK + + +
Sbjct: 187 GVLFNCIQELPAVRVSTLIEHLDTYVRSQAKLLKGYTSEERPSTKHEINSDDTSSNVKAE 246
Query: 231 KDCDIKQKKGNQFEIGIKLFEFMIERQLIHIDT-MAGEGQKAVVKKRGKGYLEYNLFAVC 55
++ K N + G L EF++ R+ I + ++ Q +V K GK Y+ L+A+C
Sbjct: 247 ENEMANDKMQNNYAFGAFLVEFLVNRKWISLSNELSFHEQYSVTMKNGKYYIPRQLYAIC 306
Query: 54 NFELRHLPMKLNLPMVCQ 1
NF++ LP+KLNLPM+C+
Sbjct: 307 NFDISLLPIKLNLPMICK 324
>gb|EMS66648.1| hypothetical protein TRIUR3_26071 [Triticum urartu]
Length = 336
Score = 80.5 bits (197), Expect = 2e-13
Identities = 49/134 (36%), Positives = 75/134 (55%), Gaps = 24/134 (17%)
Frame = -2
Query: 330 ESSVVRVATLIDKLDSTVRTQANILK-------------NPKIDSSKDC---------DI 217
E S V+ A ID+L+STVR QA L+ K++S KD +
Sbjct: 172 ELSAVKAARFIDQLNSTVREQARFLQYKAPGSGKVEAVLTSKVESVKDVVQPKGASKKEK 231
Query: 216 KQKKGNQFEIGIKLFEFMIERQLIHIDTMAGEGQK--AVVKKRGKGYLEYNLFAVCNFEL 43
K+K ++IG L +FMIER ++HI T G ++ +V K+G+GY+E + + +CN +
Sbjct: 232 KKKIQCHYDIGKYLLQFMIERNVLHISTDRGVTKEDPVLVLKKGQGYIENSCYVMCNLNI 291
Query: 42 RHLPMKLNLPMVCQ 1
LP+KLNLPM+C+
Sbjct: 292 NLLPIKLNLPMLCK 305
>gb|AAS15052.1| DNA-directed RNA polymerase [Daucus carota]
Length = 999
Score = 73.6 bits (179), Expect = 3e-11
Identities = 45/128 (35%), Positives = 69/128 (53%), Gaps = 11/128 (8%)
Frame = -2
Query: 351 MLYNCIQESSVVRVATLIDKLDSTVRTQANILKNPK------IDSSK-DCDIKQKKG--- 202
+L+N ++ SV+R++TLID+LD+TVR+Q +LKN K I ++K DI K
Sbjct: 223 VLFNSVESDSVIRLSTLIDRLDTTVRSQIQLLKNRKSRYEQSISTAKAGVDIAPKPNGSP 282
Query: 201 -NQFEIGIKLFEFMIERQLIHIDTMAGEGQKAVVKKRGKGYLEYNLFAVCNFELRHLPMK 25
N F G +L F+ + LI I + + KK G YL + + C LP++
Sbjct: 283 KNTFHFGNELASFLERKDLIEISIIGNIEDEPNRKKNGSFYLAKHQYVHCKIPASDLPIR 342
Query: 24 LNLPMVCQ 1
+LPMVC+
Sbjct: 343 FSLPMVCK 350
>emb|CBJ20686.1| hypothetical protein [Beta vulgaris subsp. maritima]
Length = 670
Score = 68.2 bits (165), Expect = 1e-09
Identities = 43/127 (33%), Positives = 66/127 (51%), Gaps = 11/127 (8%)
Frame = -2
Query: 351 MLYNCIQESSVVRVATLIDKLDSTVRTQANILK----NPKIDSSKDCDIKQKKGNQ--FE 190
+L + + S VR A++I++++S VR A+IL NP + K++ N +
Sbjct: 214 VLSSLFRIQSSVRCASMIERIESLVRRNAHILSHKDGNPSTHTPVSTYCKKESNNSISYP 273
Query: 189 IGIKLFEFMIERQLIHID-----TMAGEGQKAVVKKRGKGYLEYNLFAVCNFELRHLPMK 25
G L EFM+ER LI + ++ G + + KK+G Y L+ C F+ LPMK
Sbjct: 274 FGTALIEFMVERGLIDLKVRDVLSVQGGNKPEIKKKKGSRYRSSALYVECKFDTSLLPMK 333
Query: 24 LNLPMVC 4
L LPMVC
Sbjct: 334 LQLPMVC 340
>ref|NP_064021.1| orf670 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
gi|9838496|ref|NP_064108.1| orf670 gene product
(mitochondrion) [Beta vulgaris subsp. vulgaris]
gi|323435078|ref|YP_004222296.1| hypothetical protein
BevumaM_p058 [Beta vulgaris subsp. maritima]
gi|323435132|ref|YP_004222350.1| hypothetical protein
BevumaM_p117 [Beta vulgaris subsp. maritima]
gi|346683169|ref|YP_004842101.1| hypothetical protein
BemaM_p054 [Beta macrocarpa]
gi|346683223|ref|YP_004842155.1| hypothetical protein
BemaM_p111 [Beta macrocarpa] gi|9049322|dbj|BAA99332.1|
orf670 [Beta vulgaris subsp. vulgaris]
gi|9087358|dbj|BAA99502.1| orf670 [Beta vulgaris subsp.
vulgaris] gi|317905583|emb|CBJ13995.1| hypothetical
protein [Beta vulgaris subsp. maritima]
gi|317905631|emb|CBJ14031.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|319439811|emb|CBJ17522.1|
hypothetical protein [Beta vulgaris subsp. maritima]
gi|319439865|emb|CBJ17570.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|345500087|emb|CBX24903.1|
hypothetical protein [Beta macrocarpa]
gi|345500141|emb|CBX24960.1| hypothetical protein [Beta
macrocarpa] gi|384977890|emb|CBL54112.1| hypothetical
protein (mitochondrion) [Beta vulgaris subsp. maritima]
Length = 670
Score = 67.4 bits (163), Expect = 2e-09
Identities = 43/127 (33%), Positives = 66/127 (51%), Gaps = 11/127 (8%)
Frame = -2
Query: 351 MLYNCIQESSVVRVATLIDKLDSTVRTQANILK----NPKIDSSKDCDIKQKKGNQ--FE 190
+L + + S VR A++I++++S VR A+IL NP + K++ N +
Sbjct: 214 VLSSLFRIQSSVRCASMIERIESLVRRNAHILSHKDGNPSTHTPVSTYCKKESNNSISYP 273
Query: 189 IGIKLFEFMIERQLIHID-----TMAGEGQKAVVKKRGKGYLEYNLFAVCNFELRHLPMK 25
G L EFM+ER LI + ++ G + + KK+G Y L+ C F+ LPMK
Sbjct: 274 FGTALIEFMVERGLIDLKVRDVLSVQGGNKPEIKKKKGYRYRSSALYVECKFDTSLLPMK 333
Query: 24 LNLPMVC 4
L LPMVC
Sbjct: 334 LQLPMVC 340
>dbj|BAD66821.1| orf670 [Beta vulgaris subsp. vulgaris]
Length = 670
Score = 67.4 bits (163), Expect = 2e-09
Identities = 43/127 (33%), Positives = 66/127 (51%), Gaps = 11/127 (8%)
Frame = -2
Query: 351 MLYNCIQESSVVRVATLIDKLDSTVRTQANILK----NPKIDSSKDCDIKQKKGNQ--FE 190
+L + + S VR A++I++++S VR A+IL NP + K++ N +
Sbjct: 214 VLSSLFRIQSSVRCASMIERIESLVRRNAHILSHKDGNPSTHTPVSTYCKKESNNSISYP 273
Query: 189 IGIKLFEFMIERQLIHID-----TMAGEGQKAVVKKRGKGYLEYNLFAVCNFELRHLPMK 25
G L EFM+ER LI + ++ G + + KK+G Y L+ C F+ LPMK
Sbjct: 274 FGTALIEFMVERGLIDLKVRDVLSVQGGNKPEIKKKKGYRYRSSALYVECKFDTSLLPMK 333
Query: 24 LNLPMVC 4
L LPMVC
Sbjct: 334 LQLPMVC 340
>gb|AFI44306.1| RNA polymerase (mitochondrion) [Silene vulgaris]
Length = 1053
Score = 57.4 bits (137), Expect = 2e-06
Identities = 44/122 (36%), Positives = 62/122 (50%), Gaps = 18/122 (14%)
Frame = -2
Query: 318 VRVATLIDKLDSTVRTQANILK----NPKIDSSKDCDIKQKKGNQFEIGIKLFEFMIERQ 151
V VA+L+D+++S+VR A ILK N ID KD +K+ F G L EF+++R+
Sbjct: 215 VSVASLVDRIESSVRQHAKILKSNRLNVTIDPEKDPYNMKKRSYPF--GTGLVEFLLDRR 272
Query: 150 LIHIDTMAGEGQKAVVK-------------KRGKG-YLEYNLFAVCNFELRHLPMKLNLP 13
LI I + + K K+GK Y E +A C F LP+KLNLP
Sbjct: 273 LIVITNRYMDEMLTINKDDSIPLTFIKQSSKKGKNFYREKYNYAECTFNTALLPIKLNLP 332
Query: 12 MV 7
M+
Sbjct: 333 MI 334
>gb|EMS61822.1| hypothetical protein TRIUR3_06156 [Triticum urartu]
Length = 330
Score = 56.6 bits (135), Expect = 4e-06
Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 22/99 (22%)
Frame = -2
Query: 354 GMLYNCIQESSVVRVATLIDKLDSTVRTQANILK-------------NPKIDSSKDC--- 223
G+++N +QESS V+ A ID+L+STVR QA L+ K++S KD
Sbjct: 147 GLVFNTLQESSAVKAARFIDQLNSTVREQARFLQYKAPGSGKVEAVLTSKVESVKDVVQP 206
Query: 222 ------DIKQKKGNQFEIGIKLFEFMIERQLIHIDTMAG 124
+ K+K ++IG L +FMIER ++HI T G
Sbjct: 207 KGASKKEKKKKIQCHYDIGKYLLQFMIERNVLHISTDRG 245