BLASTX nr result
ID: Paeonia22_contig00034273
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Paeonia22_contig00034273 (788 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] 42 2e-07 gb|AAC95175.1| putative non-LTR retroelement reverse transcripta... 41 1e-06 >gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] Length = 740 Score = 42.4 bits (98), Expect(3) = 2e-07 Identities = 30/133 (22%), Positives = 58/133 (43%), Gaps = 6/133 (4%) Frame = +1 Query: 4 LNLDKSMCFTVGISDVCKSNFLSLMDFGEGKLLIRYXXXXXXXXXXXXKDCRPIWDRI-- 177 ++L+KS + G+S++ ++N LS F G+L +RY D P+ D++ Sbjct: 309 ISLEKSTLYLAGVSELNRNNILSAFPFASGQLPVRYLGLPLLTKQMTTADYSPLLDKVRS 368 Query: 178 -VPGSTLGAIGYCSSLGAFS*SNRFSLVSRFLV*CFLTS*ACLEDIFR---NFPWKGSDM 345 + T ++ Y L ++ +S F + + C+++I + F W G ++ Sbjct: 369 KISSWTARSLSYAGRLALI--NSVIVSLSNFWMSAYRLPAGCIKEIEKLCSAFLWSGPEL 426 Query: 346 LKGGNKIARASFC 384 KI S C Sbjct: 427 NPKKAKITWTSLC 439 Score = 38.1 bits (87), Expect(3) = 2e-07 Identities = 16/35 (45%), Positives = 22/35 (62%) Frame = +2 Query: 401 GLGFKRLEDWSLASIG*HIWRIVSKADSVWVRWIW 505 GLG K L + + S IWR+VS+ S+WV W+W Sbjct: 446 GLGIKSLLEANKVSCLKLIWRLVSRQSSLWVNWVW 480 Score = 20.8 bits (42), Expect(3) = 2e-07 Identities = 6/10 (60%), Positives = 8/10 (80%) Frame = +3 Query: 540 WYWWKILKFR 569 W W K+LK+R Sbjct: 501 WMWKKLLKYR 510 >gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1352 Score = 40.8 bits (94), Expect(2) = 1e-06 Identities = 35/131 (26%), Positives = 54/131 (41%), Gaps = 4/131 (3%) Frame = +1 Query: 4 LNLDKSMCFTVGISDVCKSNFLSLMDFGEGKLLIRYXXXXXXXXXXXXKDCRPIWDRIVP 183 ++L+KS F GIS K++ L F G L ++Y D P+ ++I Sbjct: 883 ISLEKSTIFMAGISPNAKTSILQQFPFELGTLPVKYLGLPLLTKRMTQSDYLPLVEKIRA 942 Query: 184 GSTLGAIGYCSSLGAFS-*SNRFSLVSRFLV*CFLTS*ACLEDI---FRNFPWKGSDMLK 351 T + S G + S ++ F + F ACL++I F F W G D+ Sbjct: 943 RITSWTNRFLSFAGRLQLIKSVLSSITNFWLSVFRLPKACLQEIEKMFSAFLWSGPDLNT 1002 Query: 352 GGNKIARASFC 384 KIA + C Sbjct: 1003 KKAKIAWSEVC 1013 Score = 38.5 bits (88), Expect(2) = 1e-06 Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 10/52 (19%) Frame = +2 Query: 401 GLGFKRLEDWSLASIG*HIWRIVSKADSVWVRWI----------WEVRLNFG 526 GLG K L++ + S+ IWRI+S DS+WV+W+ W V+ N G Sbjct: 1020 GLGLKPLKEANEVSLLKLIWRILSARDSLWVKWVNKHLIRKETFWSVKENTG 1071