BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia22_contig00034225
         (693 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62043.1| hypothetical protein VITISV_038847 [Vitis vinifera]   260   3e-67
ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I sub...   254   2e-65
ref|XP_004163996.1| PREDICTED: probable DNA-directed RNA polymer...   251   1e-64
ref|XP_007133696.1| hypothetical protein PHAVU_011G201300g [Phas...   251   2e-64
ref|XP_006594369.1| PREDICTED: DNA-directed RNA polymerase I sub...   246   5e-63
ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I sub...   246   5e-63
ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymer...   242   1e-61
ref|XP_006366498.1| PREDICTED: probable DNA-directed RNA polymer...   241   1e-61
ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I sub...   239   6e-61
ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I sub...   239   8e-61
ref|XP_004486057.1| PREDICTED: probable DNA-directed RNA polymer...   238   2e-60
ref|XP_004307166.1| PREDICTED: DNA-directed RNA polymerase I sub...   230   3e-58
ref|XP_007224731.1| hypothetical protein PRUPE_ppa024690mg, part...   228   1e-57
ref|XP_004300118.1| PREDICTED: DNA-directed RNA polymerase I sub...   228   1e-57
ref|XP_007010837.1| Nuclear RNA polymerase A2 isoform 2 [Theobro...   227   3e-57
ref|XP_006464288.1| PREDICTED: probable DNA-directed RNA polymer...   224   2e-56
ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymer...   224   2e-56
emb|CBI35100.3| unnamed protein product [Vitis vinifera]              224   2e-56
ref|NP_564341.2| nuclear RNA polymerase A2 [Arabidopsis thaliana...   213   6e-53
ref|XP_002893589.1| hypothetical protein ARALYDRAFT_313639 [Arab...   205   1e-50

>emb|CAN62043.1| hypothetical protein VITISV_038847 [Vitis vinifera]
          Length = 416

 Score =  260 bits (665), Expect = 3e-67
 Identities = 128/187 (68%), Positives = 154/187 (82%), Gaps = 5/187 (2%)
 Frame = -3

Query: 547 DYEPLRELVKPHIDSFDHLIASGLEQVLLALKPV-----VVSDPSCSRQLRIWFGKHHLS 383
           DYEPLREL + HIDSFDHL+  GLE +L+++KPV       +      ++ +WFG+  L 
Sbjct: 7   DYEPLRELFQHHIDSFDHLVEFGLETLLMSVKPVESLFITHNGVFFLTRIALWFGQPELY 66

Query: 382 EPKKETSVRTMREKLYPFECRQARISYTGKLVAELNFQYDEGPPIREKFDLGQFPIMLMS 203
            P+KE S RTMR+ LYPFECRQA+ISY+GKL+A++ FQY  G  IREKF+LGQFP+ML S
Sbjct: 67  PPQKERSARTMRDALYPFECRQAKISYSGKLLADVCFQYGNGVVIREKFNLGQFPMMLKS 126

Query: 202 KLCNLRGADPQKLISCKEESSEMGGYFILNGLERIVRLLILPKRNYPTSMVRSSFRERRD 23
           KLC+LRGADPQKL+SCKEESSEMGGYFILNGLER+VRLLILPKRNYP SMVR+SFR+RR+
Sbjct: 127 KLCHLRGADPQKLVSCKEESSEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFRDRRE 186

Query: 22  GYTDKAV 2
           GYTDKAV
Sbjct: 187 GYTDKAV 193


>ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cucumis
           sativus]
          Length = 1173

 Score =  254 bits (648), Expect = 2e-65
 Identities = 120/186 (64%), Positives = 152/186 (81%)
 Frame = -3

Query: 559 NSARDYEPLRELVKPHIDSFDHLIASGLEQVLLALKPVVVSDPSCSRQLRIWFGKHHLSE 380
           N   DYE LREL + HI+SFDHL+ +GLE ++ ++KPV + D   +++LRIW GK  L  
Sbjct: 6   NENEDYEALRELFRHHIESFDHLVDAGLETLMNSIKPVEIYDSFTNKKLRIWLGKPELYP 65

Query: 379 PKKETSVRTMREKLYPFECRQARISYTGKLVAELNFQYDEGPPIREKFDLGQFPIMLMSK 200
           P+KE ++RT+RE L P+ECRQA+ISYTGK +A++ FQYDE   IREKF+ GQFPIML SK
Sbjct: 66  PQKERNLRTIREALLPYECRQAKISYTGKFMADVCFQYDEKAVIREKFNFGQFPIMLKSK 125

Query: 199 LCNLRGADPQKLISCKEESSEMGGYFILNGLERIVRLLILPKRNYPTSMVRSSFRERRDG 20
           LC+LRG DP+KL+S  EE+SEMGGYF++NGLER+VRLLI PKRNYPTSMVR+SF +RR+G
Sbjct: 126 LCHLRGLDPKKLVSYNEEASEMGGYFVMNGLERVVRLLIAPKRNYPTSMVRNSFSDRREG 185

Query: 19  YTDKAV 2
           YTDKAV
Sbjct: 186 YTDKAV 191


>ref|XP_004163996.1| PREDICTED: probable DNA-directed RNA polymerase I subunit
           RPA2-like, partial [Cucumis sativus]
          Length = 948

 Score =  251 bits (642), Expect = 1e-64
 Identities = 119/186 (63%), Positives = 151/186 (81%)
 Frame = -3

Query: 559 NSARDYEPLRELVKPHIDSFDHLIASGLEQVLLALKPVVVSDPSCSRQLRIWFGKHHLSE 380
           N   DYE LREL + HI+SFDHL+ +GLE ++ ++KPV + D   +++LRIW GK  L  
Sbjct: 6   NENEDYEALRELFRHHIESFDHLVDAGLETLMNSIKPVEIYDSFTNKKLRIWLGKPELYP 65

Query: 379 PKKETSVRTMREKLYPFECRQARISYTGKLVAELNFQYDEGPPIREKFDLGQFPIMLMSK 200
           P+KE ++RT+RE L P+ECRQA+ISYTGK +A++ FQYDE   IREK + GQFPIML SK
Sbjct: 66  PQKERNLRTIREALLPYECRQAKISYTGKFMADVCFQYDEKAVIREKLNFGQFPIMLKSK 125

Query: 199 LCNLRGADPQKLISCKEESSEMGGYFILNGLERIVRLLILPKRNYPTSMVRSSFRERRDG 20
           LC+LRG DP+KL+S  EE+SEMGGYF++NGLER+VRLLI PKRNYPTSMVR+SF +RR+G
Sbjct: 126 LCHLRGLDPKKLVSYNEEASEMGGYFVMNGLERVVRLLIAPKRNYPTSMVRNSFSDRREG 185

Query: 19  YTDKAV 2
           YTDKAV
Sbjct: 186 YTDKAV 191


>ref|XP_007133696.1| hypothetical protein PHAVU_011G201300g [Phaseolus vulgaris]
           gi|561006696|gb|ESW05690.1| hypothetical protein
           PHAVU_011G201300g [Phaseolus vulgaris]
          Length = 1180

 Score =  251 bits (641), Expect = 2e-64
 Identities = 121/185 (65%), Positives = 147/185 (79%)
 Frame = -3

Query: 556 SARDYEPLRELVKPHIDSFDHLIASGLEQVLLALKPVVVSDPSCSRQLRIWFGKHHLSEP 377
           S  D+E LREL K HI+SFDH++ +GLE  LL +KP+ V D   + +LRIW     +  P
Sbjct: 7   SVPDFEALRELFKHHIESFDHMVKAGLETTLLHIKPIEVLDDFTTTKLRIWLENPVVYPP 66

Query: 376 KKETSVRTMREKLYPFECRQARISYTGKLVAELNFQYDEGPPIREKFDLGQFPIMLMSKL 197
           +KE   +TMRE L PFECRQA+ISY GK+  ++ FQY++GP IRE  + GQFPIML SKL
Sbjct: 67  QKERISKTMREALLPFECRQAKISYAGKITIDVCFQYNDGPVIRENVNFGQFPIMLQSKL 126

Query: 196 CNLRGADPQKLISCKEESSEMGGYFILNGLERIVRLLILPKRNYPTSMVRSSFRERRDGY 17
           CNLRGADP+KL+SCKEE+SEMGGYFILNGLER++RLLILPKRNYP SMVRSSF +RR+GY
Sbjct: 127 CNLRGADPKKLVSCKEEASEMGGYFILNGLERVIRLLILPKRNYPMSMVRSSFCDRREGY 186

Query: 16  TDKAV 2
           TDKAV
Sbjct: 187 TDKAV 191


>ref|XP_006594369.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform
           X2 [Glycine max]
          Length = 1151

 Score =  246 bits (628), Expect = 5e-63
 Identities = 122/185 (65%), Positives = 147/185 (79%)
 Frame = -3

Query: 556 SARDYEPLRELVKPHIDSFDHLIASGLEQVLLALKPVVVSDPSCSRQLRIWFGKHHLSEP 377
           S  D+E LREL K HI+SFD+++ +GL+ +L  +KPV V D   S +LRIW     L  P
Sbjct: 7   SVPDFEALRELFKHHIESFDYMVDAGLDTMLGHIKPVEVFDDFTSTKLRIWLDNPVLYPP 66

Query: 376 KKETSVRTMREKLYPFECRQARISYTGKLVAELNFQYDEGPPIREKFDLGQFPIMLMSKL 197
           +KE   RTMRE L PFECRQA+ISY+GK+  ++ FQY++GP IRE  + GQFPIML SKL
Sbjct: 67  QKERISRTMREALLPFECRQAKISYSGKITIDVCFQYNDGPIIRENVNFGQFPIMLQSKL 126

Query: 196 CNLRGADPQKLISCKEESSEMGGYFILNGLERIVRLLILPKRNYPTSMVRSSFRERRDGY 17
           CNLRGADPQKL+S KEE+SEMGGYFILNGLER+VRLLILPKRNYP SMVR+SF +RR+GY
Sbjct: 127 CNLRGADPQKLVSYKEEASEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFSDRREGY 186

Query: 16  TDKAV 2
           TDKAV
Sbjct: 187 TDKAV 191


>ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform
           X1 [Glycine max]
          Length = 1175

 Score =  246 bits (628), Expect = 5e-63
 Identities = 122/185 (65%), Positives = 147/185 (79%)
 Frame = -3

Query: 556 SARDYEPLRELVKPHIDSFDHLIASGLEQVLLALKPVVVSDPSCSRQLRIWFGKHHLSEP 377
           S  D+E LREL K HI+SFD+++ +GL+ +L  +KPV V D   S +LRIW     L  P
Sbjct: 7   SVPDFEALRELFKHHIESFDYMVDAGLDTMLGHIKPVEVFDDFTSTKLRIWLDNPVLYPP 66

Query: 376 KKETSVRTMREKLYPFECRQARISYTGKLVAELNFQYDEGPPIREKFDLGQFPIMLMSKL 197
           +KE   RTMRE L PFECRQA+ISY+GK+  ++ FQY++GP IRE  + GQFPIML SKL
Sbjct: 67  QKERISRTMREALLPFECRQAKISYSGKITIDVCFQYNDGPIIRENVNFGQFPIMLQSKL 126

Query: 196 CNLRGADPQKLISCKEESSEMGGYFILNGLERIVRLLILPKRNYPTSMVRSSFRERRDGY 17
           CNLRGADPQKL+S KEE+SEMGGYFILNGLER+VRLLILPKRNYP SMVR+SF +RR+GY
Sbjct: 127 CNLRGADPQKLVSYKEEASEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFSDRREGY 186

Query: 16  TDKAV 2
           TDKAV
Sbjct: 187 TDKAV 191


>ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
           isoform X1 [Glycine max]
          Length = 1175

 Score =  242 bits (617), Expect = 1e-61
 Identities = 118/185 (63%), Positives = 145/185 (78%)
 Frame = -3

Query: 556 SARDYEPLRELVKPHIDSFDHLIASGLEQVLLALKPVVVSDPSCSRQLRIWFGKHHLSEP 377
           S  D+E LREL K HI+SFD++  +GLE +L  +KP+ V D   S +LRIW     L  P
Sbjct: 7   SIPDFEALRELFKHHIESFDYMADAGLETMLRHIKPIEVFDDFTSTKLRIWLDNPVLYPP 66

Query: 376 KKETSVRTMREKLYPFECRQARISYTGKLVAELNFQYDEGPPIREKFDLGQFPIMLMSKL 197
           +KE   RTMRE L PFECRQA+ISY GK+  ++ FQY++GP IRE  + GQFPIML SKL
Sbjct: 67  QKERISRTMREALLPFECRQAKISYAGKITIDVCFQYNDGPIIRENINFGQFPIMLQSKL 126

Query: 196 CNLRGADPQKLISCKEESSEMGGYFILNGLERIVRLLILPKRNYPTSMVRSSFRERRDGY 17
           CNLRGADPQKL+S +EE+SEMGGYFILNGLER++RLLILPKRN+P SMVR+SF +RR+GY
Sbjct: 127 CNLRGADPQKLVSYREEASEMGGYFILNGLERVIRLLILPKRNHPMSMVRNSFSDRREGY 186

Query: 16  TDKAV 2
           TDKA+
Sbjct: 187 TDKAI 191


>ref|XP_006366498.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
           [Solanum tuberosum]
          Length = 1179

 Score =  241 bits (616), Expect = 1e-61
 Identities = 117/200 (58%), Positives = 155/200 (77%), Gaps = 1/200 (0%)
 Frame = -3

Query: 598 QSEKHRNLNNMVGNSARDYEPLRELVKPHIDSFDHLIASGLEQVLLALKPVVVSDPSCSR 419
           + EK + ++     + +DY  L+EL   HI+SFD+++ +GLE +LL +KP+ + D   S 
Sbjct: 2   EEEKPKAMSRPHLVAEKDYSALKELFSHHIESFDYMVDNGLETMLLNIKPIEIVDSFSSL 61

Query: 418 QLRIWFGKHHLSEPKKETSVRTMREKLYPFECRQARISYTGKLVAELNFQYDEGPPIREK 239
           +LRIWFGK  L  P+KE + +TM + LYPFECRQA++SYTGK + ++ FQY +G  IREK
Sbjct: 62  KLRIWFGKPELFPPQKERASKTMHDALYPFECRQAKLSYTGKFLVDICFQYGDGAVIREK 121

Query: 238 FDLGQFPIMLMSKLCNLRGA-DPQKLISCKEESSEMGGYFILNGLERIVRLLILPKRNYP 62
           F+ GQFPIML SKLC+LRGA D +KLI+ KEE SEMGGYFIL GLER++RL+ILPKRNYP
Sbjct: 122 FNFGQFPIMLKSKLCHLRGADDSRKLIAYKEEPSEMGGYFILKGLERVIRLIILPKRNYP 181

Query: 61  TSMVRSSFRERRDGYTDKAV 2
           TSM R+SFR+RR+GY+DKAV
Sbjct: 182 TSMARNSFRDRREGYSDKAV 201


>ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Vitis
           vinifera]
          Length = 1142

 Score =  239 bits (610), Expect = 6e-61
 Identities = 121/182 (66%), Positives = 140/182 (76%)
 Frame = -3

Query: 547 DYEPLRELVKPHIDSFDHLIASGLEQVLLALKPVVVSDPSCSRQLRIWFGKHHLSEPKKE 368
           DYEPLREL + HIDSFDHL+  GLE +L+++KP                           
Sbjct: 7   DYEPLRELFQHHIDSFDHLVEFGLETLLMSVKP--------------------------- 39

Query: 367 TSVRTMREKLYPFECRQARISYTGKLVAELNFQYDEGPPIREKFDLGQFPIMLMSKLCNL 188
            S RTMR+ LYPFECRQA+ISY+GKL+A++ FQY  G  IREKF+LGQFPIML SKLC+L
Sbjct: 40  RSARTMRDALYPFECRQAKISYSGKLLADVCFQYGNGVAIREKFNLGQFPIMLKSKLCHL 99

Query: 187 RGADPQKLISCKEESSEMGGYFILNGLERIVRLLILPKRNYPTSMVRSSFRERRDGYTDK 8
           RGADPQKL+SCKEESSEMGGYFILNGLER+VRLLILPKRNYP SMVR+SFR+RR+GYTDK
Sbjct: 100 RGADPQKLVSCKEESSEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFRDRREGYTDK 159

Query: 7   AV 2
           AV
Sbjct: 160 AV 161


>ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Solanum
           lycopersicum]
          Length = 1184

 Score =  239 bits (609), Expect = 8e-61
 Identities = 115/201 (57%), Positives = 155/201 (77%), Gaps = 1/201 (0%)
 Frame = -3

Query: 601 PQSEKHRNLNNMVGNSARDYEPLRELVKPHIDSFDHLIASGLEQVLLALKPVVVSDPSCS 422
           P+S+  + ++     + +DY  L+EL   HI+SFD+++ +GLE +LL +KP+ + D   S
Sbjct: 6   PKSDGSKAMSRPHLVAEKDYSALKELFSHHIESFDYMVDNGLETMLLNIKPIEIVDSFSS 65

Query: 421 RQLRIWFGKHHLSEPKKETSVRTMREKLYPFECRQARISYTGKLVAELNFQYDEGPPIRE 242
            +LRIWFGK  L  P+KE + + M + LYPFECRQA+ISY+GK + ++ FQY +G  IRE
Sbjct: 66  LKLRIWFGKPELFPPQKERASKAMHDALYPFECRQAKISYSGKFLVDICFQYGDGAVIRE 125

Query: 241 KFDLGQFPIMLMSKLCNLRGA-DPQKLISCKEESSEMGGYFILNGLERIVRLLILPKRNY 65
           KF+ GQFPIML SKLC+LRGA D +KL++ KEE SEMGGYFIL GLER++RL+ILPKRNY
Sbjct: 126 KFNFGQFPIMLKSKLCHLRGADDSKKLVAYKEEPSEMGGYFILKGLERVIRLIILPKRNY 185

Query: 64  PTSMVRSSFRERRDGYTDKAV 2
           PTSM R+SFR+RR+GY+DKAV
Sbjct: 186 PTSMARNSFRDRREGYSDKAV 206


>ref|XP_004486057.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
           isoform X1 [Cicer arietinum]
           gi|502078798|ref|XP_004486058.1| PREDICTED: probable
           DNA-directed RNA polymerase I subunit RPA2-like isoform
           X2 [Cicer arietinum]
          Length = 1177

 Score =  238 bits (606), Expect = 2e-60
 Identities = 114/182 (62%), Positives = 142/182 (78%)
 Frame = -3

Query: 547 DYEPLRELVKPHIDSFDHLIASGLEQVLLALKPVVVSDPSCSRQLRIWFGKHHLSEPKKE 368
           +++ LR+L+KPHI+SFDH+I +GL+ + + +KP+ V  P+    L+I      + EP+KE
Sbjct: 16  NFDALRDLLKPHIESFDHMIDAGLKTMFIGIKPLEVPHPTQPTTLKISMDNPKIFEPQKE 75

Query: 367 TSVRTMREKLYPFECRQARISYTGKLVAELNFQYDEGPPIREKFDLGQFPIMLMSKLCNL 188
                 R  LYPFECRQA+ISYTG   AEL FQYD GP +REKF+ GQFPIML SKLCNL
Sbjct: 76  RGFSKSRNILYPFECRQAKISYTGTFTAELCFQYDNGPIVREKFNFGQFPIMLQSKLCNL 135

Query: 187 RGADPQKLISCKEESSEMGGYFILNGLERIVRLLILPKRNYPTSMVRSSFRERRDGYTDK 8
           RGA P+KL+S KEE+SE+GGYFILNGLER++RLLI+PKRNYP S VRSSF ERR+GYTDK
Sbjct: 136 RGASPKKLVSYKEEASEVGGYFILNGLERVMRLLIMPKRNYPMSTVRSSFSERREGYTDK 195

Query: 7   AV 2
           AV
Sbjct: 196 AV 197


>ref|XP_004307166.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like
           [Fragaria vesca subsp. vesca]
          Length = 1169

 Score =  230 bits (587), Expect = 3e-58
 Identities = 117/186 (62%), Positives = 141/186 (75%), Gaps = 1/186 (0%)
 Frame = -3

Query: 556 SARDYEPLRELVKPHIDSFDHLIASGLEQVLLALKPVVVSDPSCSRQLRIWFGKHH-LSE 380
           SA D   LREL + HIDSFD+LI +GL  +L  +KPV V +P     LRIWF     L  
Sbjct: 9   SAGDLAHLRELFRHHIDSFDYLITAGLGVMLRDIKPVQVDNPLTGETLRIWFADDPILGR 68

Query: 379 PKKETSVRTMREKLYPFECRQARISYTGKLVAELNFQYDEGPPIREKFDLGQFPIMLMSK 200
           P K+ S     E LYPFECRQ RISYTGKL+A++ FQ  +  P+RE+F+ GQFPIMLMSK
Sbjct: 69  PLKDRS----SEPLYPFECRQTRISYTGKLLADIYFQRGDKAPVREQFNFGQFPIMLMSK 124

Query: 199 LCNLRGADPQKLISCKEESSEMGGYFILNGLERIVRLLILPKRNYPTSMVRSSFRERRDG 20
            CNLRG DPQ+L+SCKEE+SEMGGYFILNGLER++R +ILPKRNYP S VR+SFR+R++G
Sbjct: 125 CCNLRGHDPQQLVSCKEEASEMGGYFILNGLERVIRPVILPKRNYPMSTVRNSFRDRKEG 184

Query: 19  YTDKAV 2
           YTDKAV
Sbjct: 185 YTDKAV 190


>ref|XP_007224731.1| hypothetical protein PRUPE_ppa024690mg, partial [Prunus persica]
           gi|462421667|gb|EMJ25930.1| hypothetical protein
           PRUPE_ppa024690mg, partial [Prunus persica]
          Length = 235

 Score =  228 bits (582), Expect = 1e-57
 Identities = 119/226 (52%), Positives = 151/226 (66%), Gaps = 42/226 (18%)
 Frame = -3

Query: 553 ARDYEPLRELVKPHIDSFDHLIASGLEQVLLALKPVVVSDPSCSRQLR------------ 410
           + DY  +REL + HI+SFDH + +GLE +L  +KP+ V D S    L             
Sbjct: 9   SEDYAAVRELFRHHIESFDHFVTAGLETMLNKIKPIEVVDSSTGTSLANILSFFLFKILL 68

Query: 409 -----------------IWFGKHHLSEPKKETSVRTMREKLYPFE-------------CR 320
                            +WFGK  L  P+KE S +T R KL PFE             CR
Sbjct: 69  FTFYFPFEWRLFLTHILLWFGKPFLFPPQKEES-KTARGKLLPFEVSVKHSYRYMCMNCR 127

Query: 319 QARISYTGKLVAELNFQYDEGPPIREKFDLGQFPIMLMSKLCNLRGADPQKLISCKEESS 140
           QA++SYTGK +A++ F+Y++GP IRE F+ GQ PIMLMSKLC+LRGA+P+KL+SCKEESS
Sbjct: 128 QAKVSYTGKFMADVYFKYNDGPAIRENFNFGQLPIMLMSKLCHLRGANPEKLVSCKEESS 187

Query: 139 EMGGYFILNGLERIVRLLILPKRNYPTSMVRSSFRERRDGYTDKAV 2
           EMGGYF+LNGLER+VRL+ILPKRNYPTSMVR+SFR+R++GYTDKAV
Sbjct: 188 EMGGYFVLNGLERVVRLVILPKRNYPTSMVRNSFRDRKEGYTDKAV 233


>ref|XP_004300118.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like
           [Fragaria vesca subsp. vesca]
          Length = 1171

 Score =  228 bits (581), Expect = 1e-57
 Identities = 115/186 (61%), Positives = 141/186 (75%), Gaps = 1/186 (0%)
 Frame = -3

Query: 556 SARDYEPLRELVKPHIDSFDHLIASGLEQVLLALKPVVVSDPSCSRQLRIWFGKHH-LSE 380
           SA D   LREL + HI+SFD+L+++GL  +L  +KPV V +P     LRIWF     L  
Sbjct: 11  SAGDLAHLRELFRHHIESFDYLVSAGLGVMLRDIKPVQVDNPLTGETLRIWFADDPILGR 70

Query: 379 PKKETSVRTMREKLYPFECRQARISYTGKLVAELNFQYDEGPPIREKFDLGQFPIMLMSK 200
           P K+ S     E LYPFECRQ RISYTGKL+A++ FQ  +  P+RE+F+ GQFPIMLMSK
Sbjct: 71  PLKDRST----EPLYPFECRQTRISYTGKLLADIYFQRGDKAPVREQFNFGQFPIMLMSK 126

Query: 199 LCNLRGADPQKLISCKEESSEMGGYFILNGLERIVRLLILPKRNYPTSMVRSSFRERRDG 20
            CNLRG DPQ+L+ CKEESSEMGGYFILNGLER++R +ILPKRNYP S VR+SFR+R++G
Sbjct: 127 CCNLRGHDPQQLVYCKEESSEMGGYFILNGLERVIRPVILPKRNYPMSTVRNSFRDRKEG 186

Query: 19  YTDKAV 2
           YTDKAV
Sbjct: 187 YTDKAV 192


>ref|XP_007010837.1| Nuclear RNA polymerase A2 isoform 2 [Theobroma cacao]
           gi|508727750|gb|EOY19647.1| Nuclear RNA polymerase A2
           isoform 2 [Theobroma cacao]
          Length = 1180

 Score =  227 bits (578), Expect = 3e-57
 Identities = 110/186 (59%), Positives = 141/186 (75%)
 Frame = -3

Query: 559 NSARDYEPLRELVKPHIDSFDHLIASGLEQVLLALKPVVVSDPSCSRQLRIWFGKHHLSE 380
           + A + E L+EL K HI+SFD++I  GL+ +L  +KPV + D S ++ LRIW     +  
Sbjct: 13  SDAEELEELKELFKHHIESFDYMIDEGLDLMLKRVKPVQIFDSSSNKTLRIWLDHPEVYP 72

Query: 379 PKKETSVRTMREKLYPFECRQARISYTGKLVAELNFQYDEGPPIREKFDLGQFPIMLMSK 200
           P+K+ S +T    LYPFECRQA+ISYTG    ++ FQ+D G  +REK + G+FPIML SK
Sbjct: 73  PQKDRSSKTSAGALYPFECRQAKISYTGSFHIDVCFQWDGGVVVREKLNFGEFPIMLKSK 132

Query: 199 LCNLRGADPQKLISCKEESSEMGGYFILNGLERIVRLLILPKRNYPTSMVRSSFRERRDG 20
            C LR ADP+KL++CKEES EMGGYFILNGLER+VRLLILPKRNYP S+VR+SFR+RR+G
Sbjct: 133 RCYLREADPRKLVACKEESREMGGYFILNGLERVVRLLILPKRNYPMSLVRNSFRDRREG 192

Query: 19  YTDKAV 2
           YTDKAV
Sbjct: 193 YTDKAV 198


>ref|XP_006464288.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
           isoform X2 [Citrus sinensis]
          Length = 954

 Score =  224 bits (571), Expect = 2e-56
 Identities = 109/191 (57%), Positives = 148/191 (77%), Gaps = 2/191 (1%)
 Frame = -3

Query: 568 MVGNSARDYEPLRELVKPHIDSFDHLIASGLEQVLLALKPVVVSDPSCSRQLRIWFGKHH 389
           M    + D+EPLRELV+ HI+SFD+++  GL ++   +K V V D   +++L+I  G   
Sbjct: 1   MARKKSADFEPLRELVRHHIESFDYMLDEGLSEMFDHVKTVFVHDSFTNKRLKISVGNPE 60

Query: 388 LSEPKKETSVRTMREKLYPFECRQARISYTGKLVAELNFQY-DEGPPI-REKFDLGQFPI 215
           +  P+KE   +T+R+ L PFECRQA+ISYTGKL+A++ FQY D G P+ RE+F+ GQFP+
Sbjct: 61  IFPPQKEQGSKTLRDALLPFECRQAKISYTGKLMADVEFQYLDAGSPVVRERFNFGQFPV 120

Query: 214 MLMSKLCNLRGADPQKLISCKEESSEMGGYFILNGLERIVRLLILPKRNYPTSMVRSSFR 35
           ML ++ C+L+GAD QKL+S KEE++EMGGYFILNGLER+ R +ILPK+NYP SMVRSSFR
Sbjct: 121 MLKTRRCHLQGADSQKLVSLKEEAAEMGGYFILNGLERVFRSVILPKQNYPMSMVRSSFR 180

Query: 34  ERRDGYTDKAV 2
           +RR+GYTDKAV
Sbjct: 181 DRREGYTDKAV 191


>ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
           isoform X1 [Citrus sinensis]
          Length = 1175

 Score =  224 bits (571), Expect = 2e-56
 Identities = 109/191 (57%), Positives = 148/191 (77%), Gaps = 2/191 (1%)
 Frame = -3

Query: 568 MVGNSARDYEPLRELVKPHIDSFDHLIASGLEQVLLALKPVVVSDPSCSRQLRIWFGKHH 389
           M    + D+EPLRELV+ HI+SFD+++  GL ++   +K V V D   +++L+I  G   
Sbjct: 1   MARKKSADFEPLRELVRHHIESFDYMLDEGLSEMFDHVKTVFVHDSFTNKRLKISVGNPE 60

Query: 388 LSEPKKETSVRTMREKLYPFECRQARISYTGKLVAELNFQY-DEGPPI-REKFDLGQFPI 215
           +  P+KE   +T+R+ L PFECRQA+ISYTGKL+A++ FQY D G P+ RE+F+ GQFP+
Sbjct: 61  IFPPQKEQGSKTLRDALLPFECRQAKISYTGKLMADVEFQYLDAGSPVVRERFNFGQFPV 120

Query: 214 MLMSKLCNLRGADPQKLISCKEESSEMGGYFILNGLERIVRLLILPKRNYPTSMVRSSFR 35
           ML ++ C+L+GAD QKL+S KEE++EMGGYFILNGLER+ R +ILPK+NYP SMVRSSFR
Sbjct: 121 MLKTRRCHLQGADSQKLVSLKEEAAEMGGYFILNGLERVFRSVILPKQNYPMSMVRSSFR 180

Query: 34  ERRDGYTDKAV 2
           +RR+GYTDKAV
Sbjct: 181 DRREGYTDKAV 191


>emb|CBI35100.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  224 bits (571), Expect = 2e-56
 Identities = 106/139 (76%), Positives = 124/139 (89%)
 Frame = -3

Query: 418 QLRIWFGKHHLSEPKKETSVRTMREKLYPFECRQARISYTGKLVAELNFQYDEGPPIREK 239
           ++ +WFG+  L  P+KE S RTMR+ LYPFECRQA+ISY+GKL+A++ FQY  G  IREK
Sbjct: 16  RIALWFGQPELYPPQKERSARTMRDALYPFECRQAKISYSGKLLADVCFQYGNGVAIREK 75

Query: 238 FDLGQFPIMLMSKLCNLRGADPQKLISCKEESSEMGGYFILNGLERIVRLLILPKRNYPT 59
           F+LGQFPIML SKLC+LRGADPQKL+SCKEESSEMGGYFILNGLER+VRLLILPKRNYP 
Sbjct: 76  FNLGQFPIMLKSKLCHLRGADPQKLVSCKEESSEMGGYFILNGLERVVRLLILPKRNYPM 135

Query: 58  SMVRSSFRERRDGYTDKAV 2
           SMVR+SFR+RR+GYTDKAV
Sbjct: 136 SMVRNSFRDRREGYTDKAV 154


>ref|NP_564341.2| nuclear RNA polymerase A2 [Arabidopsis thaliana]
           gi|332193031|gb|AEE31152.1| nuclear RNA polymerase A2
           [Arabidopsis thaliana]
          Length = 1178

 Score =  213 bits (541), Expect = 6e-53
 Identities = 101/183 (55%), Positives = 138/183 (75%), Gaps = 1/183 (0%)
 Frame = -3

Query: 547 DYEPLRELVKPHIDSFDHLIASGLEQVLLALKPVVVSDPSCSRQLRIWFGKHHLSEPKKE 368
           D++ L  LV  HI+SFD++   GL+ +   +KPV V DP+   +L IW     +  P+KE
Sbjct: 15  DFKELHNLVTHHIESFDYMTLKGLDVMFNRIKPVSVYDPNTENELSIWLENPLVFAPQKE 74

Query: 367 TSVRTMR-EKLYPFECRQARISYTGKLVAELNFQYDEGPPIREKFDLGQFPIMLMSKLCN 191
           +   T R E L PFECRQA+ISYTG  +A++ F+Y++G  +R+KFD GQFPIMLMSKLC+
Sbjct: 75  SFKSTSRKEPLLPFECRQAKISYTGTFMADVCFKYNDGVVVRDKFDFGQFPIMLMSKLCS 134

Query: 190 LRGADPQKLISCKEESSEMGGYFILNGLERIVRLLILPKRNYPTSMVRSSFRERRDGYTD 11
           L+GAD +KL+ CKE +SEMGGYFILNG+ER+ R +I PKRN+PTSM+R+SFR+R++GY+ 
Sbjct: 135 LKGADCRKLLKCKESTSEMGGYFILNGIERVFRCVIAPKRNHPTSMIRNSFRDRKEGYSS 194

Query: 10  KAV 2
           KAV
Sbjct: 195 KAV 197


>ref|XP_002893589.1| hypothetical protein ARALYDRAFT_313639 [Arabidopsis lyrata subsp.
           lyrata] gi|297339431|gb|EFH69848.1| hypothetical protein
           ARALYDRAFT_313639 [Arabidopsis lyrata subsp. lyrata]
          Length = 1188

 Score =  205 bits (522), Expect = 1e-50
 Identities = 101/190 (53%), Positives = 138/190 (72%), Gaps = 8/190 (4%)
 Frame = -3

Query: 547 DYEPLRELVKPHIDSFDHLIASGLEQVLLALKPVVVSDPSCSRQLR-------IWFGKHH 389
           D + L  LV  HI+SFD++   GL+ +   +KPV V DP+   +L        +W     
Sbjct: 15  DLKELHNLVTHHIESFDYMTQKGLDVMFNRIKPVSVYDPNTENELSNILFFMILWLENPV 74

Query: 388 LSEPKKETSVRTMR-EKLYPFECRQARISYTGKLVAELNFQYDEGPPIREKFDLGQFPIM 212
           +  P+KE+   T R E L PFECRQA+ISYTG  +A++ F+Y++G  +R++FD GQFPIM
Sbjct: 75  VFAPQKESFRSTSRKEPLLPFECRQAKISYTGTFMADVCFKYNDGVVVRDRFDFGQFPIM 134

Query: 211 LMSKLCNLRGADPQKLISCKEESSEMGGYFILNGLERIVRLLILPKRNYPTSMVRSSFRE 32
           LMSKLC+LRGAD +KL+ CKE +SEMGGYFILNG+ER+ R +I PKRN+PTSM+R+SFR+
Sbjct: 135 LMSKLCSLRGADCRKLLKCKESTSEMGGYFILNGIERVFRCVIAPKRNHPTSMIRNSFRD 194

Query: 31  RRDGYTDKAV 2
           R++GYT+KAV
Sbjct: 195 RKEGYTEKAV 204