BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia22_contig00033450
         (560 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66775.1| hypothetical protein VITISV_035302 [Vitis vinifera]   129   5e-28
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707...    96   7e-28
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]        100   4e-26
emb|CAN62092.1| hypothetical protein VITISV_022473 [Vitis vinifera]   122   5e-26
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]         91   2e-25
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]      98   2e-25
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]                 98   3e-25
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]                98   3e-25
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...    96   1e-24
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]      96   1e-24
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...    97   2e-24
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g...    97   2e-24
ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group] g...    94   3e-24
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]      96   1e-23
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...    90   2e-23
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...    85   3e-22
gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subc...    80   7e-22
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja...    80   7e-22
emb|CAN67902.1| hypothetical protein VITISV_037907 [Vitis vinifera]    87   2e-21
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]    94   6e-20

>emb|CAN66775.1| hypothetical protein VITISV_035302 [Vitis vinifera]
          Length = 734

 Score =  129 bits (324), Expect = 5e-28
 Identities = 71/132 (53%), Positives = 88/132 (66%), Gaps = 3/132 (2%)
 Frame = -2

Query: 397 TNQNA*WIV--RILTYVRHVYDLKK-LISLNTLDSTGCNYKAEGGFIRISRRVMVVMKGK 227
           TN +  WI+  R LT +RHV  LKK LISL TLDS  C YKA GG +RIS+  +VVMKGK
Sbjct: 124 TNSSDEWILDSRTLTDLRHVPKLKKILISLGTLDSNKCTYKAGGGVLRISKGALVVMKGK 183

Query: 226 REHDLYALQXXXXXXXXXXXXXSDFDNDTTRLWHMWMGH*SERGLEVLSKQGLFDGQKTR 47
           + + LY LQ                  +TTRLWHM +GH SE+GL +LSK+GL DGQKT 
Sbjct: 184 KINGLYTLQGSTIIGAIVVSTSESII-ETTRLWHMXLGHMSEKGLTILSKRGLLDGQKTG 242

Query: 46  KLDFCEHCLYGK 11
           +L+FCEHC++GK
Sbjct: 243 ELNFCEHCVFGK 254


>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
          Length = 1773

 Score = 95.9 bits (237), Expect(3) = 7e-28
 Identities = 56/124 (45%), Positives = 74/124 (59%), Gaps = 2/124 (1%)
 Frame = -2

Query: 373 VRILTYVRHVYDLKK-LISLNTLDSTGCNYKAEGGFIRISRRVMVVMKGK-REHDLYALQ 200
           +R L+ VRH+  LK+ LISL+TLD  G  Y    G +++++  +VVMK   +  DLY LQ
Sbjct: 295 IRTLSDVRHIPSLKRNLISLSTLDRKGYRYSGGDGILKVTKGSLVVMKADIKNADLYHLQ 354

Query: 199 XXXXXXXXXXXXXSDFDNDTTRLWHMWMGH*SERGLEVLSKQGLFDGQKTRKLDFCEHCL 20
                        S  ++D   LWHM +GH SE GL  LSK+GL DGQ   KL FCEHC+
Sbjct: 355 GTTIVGNVAAVTDSLSNSD---LWHMRLGHMSEIGLAELSKRGLLDGQNIGKLKFCEHCI 411

Query: 19  YGKH 8
           +GKH
Sbjct: 412 FGKH 415



 Score = 45.1 bits (105), Expect(3) = 7e-28
 Identities = 19/43 (44%), Positives = 24/43 (55%)
 Frame = -1

Query: 500 MCPNKVWFTSYHSIDGGKVLMGNIVACNVIGSVRYKSKCIMDC 372
           MCPN+ WFT+Y  + GG VLMG+   C V G    + K    C
Sbjct: 252 MCPNRDWFTTYEPVQGGNVLMGDNTPCKVAGVGTIQIKMFDGC 294



 Score = 29.3 bits (64), Expect(3) = 7e-28
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -3

Query: 558 AVCTSSSRDEWSLDSACTYHV 496
           A C  +S DEW LD+ CTYH+
Sbjct: 233 AGCVQTS-DEWLLDTGCTYHM 252


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score =  100 bits (250), Expect(2) = 4e-26
 Identities = 56/124 (45%), Positives = 75/124 (60%), Gaps = 2/124 (1%)
 Frame = -2

Query: 373 VRILTYVRHVYDLKK-LISLNTLDSTGCNYKAEGGFIRISRRVMVVMKGK-REHDLYALQ 200
           +R L+ VRH+ +LK+ LISL TLD  G  Y    G +++++  +VVMK   +  +LY LQ
Sbjct: 353 IRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKASIKSANLYHLQ 412

Query: 199 XXXXXXXXXXXXXSDFDNDTTRLWHMWMGH*SERGLEVLSKQGLFDGQKTRKLDFCEHCL 20
                        S  ++D T LWHM +GH SE GL  LSK+GL DGQ   KL FCEHC+
Sbjct: 413 GTTILGNVATVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSISKLKFCEHCI 472

Query: 19  YGKH 8
           +GKH
Sbjct: 473 FGKH 476



 Score = 43.1 bits (100), Expect(2) = 4e-26
 Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
 Frame = -1

Query: 500 MCPNKVWFTSYHSIDGGKVLMGNIVACNV--IGSVRYK--SKCIMDCKD 366
           MCPN+ WF +Y  + GG VLMG+   C V  IG+V+ K    CI    D
Sbjct: 310 MCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSD 358


>emb|CAN62092.1| hypothetical protein VITISV_022473 [Vitis vinifera]
          Length = 318

 Score =  122 bits (307), Expect = 5e-26
 Identities = 65/123 (52%), Positives = 81/123 (65%), Gaps = 1/123 (0%)
 Frame = -2

Query: 376 IVRILTYVRHVYDLKK-LISLNTLDSTGCNYKAEGGFIRISRRVMVVMKGKREHDLYALQ 200
           I+  L  +RHV  LKK LISL TLDS GC YKA GG +RI +  +VVMKG + + LY LQ
Sbjct: 79  IIMTLIDLRHVPKLKKKLISLGTLDSNGCTYKAGGGVLRILKGALVVMKGNKINGLYTLQ 138

Query: 199 XXXXXXXXXXXXXSDFDNDTTRLWHMWMGH*SERGLEVLSKQGLFDGQKTRKLDFCEHCL 20
                             +TTRLWHM +GH S++GL +LSK+GL DGQKT +LDFCEHC+
Sbjct: 139 GGTIIGAVVVSISESII-ETTRLWHMRLGHMSDKGLTILSKRGLLDGQKTGELDFCEHCV 197

Query: 19  YGK 11
           +GK
Sbjct: 198 FGK 200


>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
          Length = 1334

 Score = 90.9 bits (224), Expect(3) = 2e-25
 Identities = 51/123 (41%), Positives = 74/123 (60%), Gaps = 1/123 (0%)
 Frame = -2

Query: 376 IVRILTYVRHVYDLKK-LISLNTLDSTGCNYKAEGGFIRISRRVMVVMKGKREHDLYALQ 200
           ++R L  VRH   LK+ LISL  LDS G  +K+  G + + +   +VMKG  E+ LY LQ
Sbjct: 345 LLRSLHEVRHAPRLKRNLISLGMLDSLGYFFKSRIGGLEVRKGTEIVMKGVNENGLYVLQ 404

Query: 199 XXXXXXXXXXXXXSDFDNDTTRLWHMWMGH*SERGLEVLSKQGLFDGQKTRKLDFCEHCL 20
                        S+   D T+LWH+ +GH S +GL+ LSKQGL  G + ++L+FCE+C+
Sbjct: 405 GSSVPVQEGVSAVSE--EDRTKLWHLRLGHMSIKGLQELSKQGLLGGDRIQQLEFCENCI 462

Query: 19  YGK 11
           +GK
Sbjct: 463 FGK 465



 Score = 46.6 bits (109), Expect(3) = 2e-25
 Identities = 20/43 (46%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
 Frame = -1

Query: 500 MCPNKVWFTSYHSIDGGKVLMGNIVACNVIGSVRYK-SKCIMD 375
           +CP K  F  Y ++DGG+VLMGN   CN++G    K S+C+M+
Sbjct: 302 LCPEKTLFYKYEAVDGGRVLMGNNNVCNIVGIWFCKRSRCLME 344



 Score = 24.6 bits (52), Expect(3) = 2e-25
 Identities = 6/17 (35%), Positives = 14/17 (82%)
 Frame = -3

Query: 546 SSSRDEWSLDSACTYHV 496
           S+++ +W +DS C++H+
Sbjct: 286 SNTKGQWVIDSGCSFHL 302


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score = 97.8 bits (242), Expect(2) = 2e-25
 Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 2/124 (1%)
 Frame = -2

Query: 373 VRILTYVRHVYDLKK-LISLNTLDSTGCNYKAEGGFIRISRRVMVVMKGKREH-DLYALQ 200
           +R L  VRH+ +LK+ LISL TLD  G  Y    G +++++  +VVMK   ++ +LY L+
Sbjct: 262 IRTLLDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKYANLYHLR 321

Query: 199 XXXXXXXXXXXXXSDFDNDTTRLWHMWMGH*SERGLEVLSKQGLFDGQKTRKLDFCEHCL 20
                        S  ++D T LWHM +GH SE GL  LSK+GL DGQ   KL FCEHC+
Sbjct: 322 GTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSIGKLKFCEHCI 381

Query: 19  YGKH 8
           +GKH
Sbjct: 382 FGKH 385



 Score = 43.9 bits (102), Expect(2) = 2e-25
 Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
 Frame = -1

Query: 500 MCPNKVWFTSYHSIDGGKVLMGNIVACNV--IGSVRYK 393
           MCPN+ WF +Y ++ GG VLMG+   C V  IG+V+ K
Sbjct: 219 MCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGTVQIK 256


>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
          Length = 1205

 Score = 97.8 bits (242), Expect(2) = 3e-25
 Identities = 55/124 (44%), Positives = 74/124 (59%), Gaps = 2/124 (1%)
 Frame = -2

Query: 373 VRILTYVRHVYDLKK-LISLNTLDSTGCNYKAEGGFIRISRRVMVVMKGK-REHDLYALQ 200
           +R L+ VRH+ +LK+ LISL TLD  G  Y    G +++++  +VVMK   +  +LY LQ
Sbjct: 338 IRTLSDVRHIPNLKRSLISLCTLDCKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLQ 397

Query: 199 XXXXXXXXXXXXXSDFDNDTTRLWHMWMGH*SERGLEVLSKQGLFDGQKTRKLDFCEHCL 20
                        S  ++D T LWHM +GH SE GL  LS +GL DGQ   KL FCEHC+
Sbjct: 398 GTTILGNVATVSDSLSNSDATNLWHMRLGHMSEIGLAELSMRGLLDGQSIGKLKFCEHCI 457

Query: 19  YGKH 8
           +GKH
Sbjct: 458 FGKH 461



 Score = 43.1 bits (100), Expect(2) = 3e-25
 Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
 Frame = -1

Query: 500 MCPNKVWFTSYHSIDGGKVLMGNIVACNV--IGSVRYK--SKCIMDCKD 366
           MCPN+ WF +Y  + GG VLMG+   C V  IG+V+ K    CI    D
Sbjct: 295 MCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSD 343


>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
          Length = 1037

 Score = 97.8 bits (242), Expect(2) = 3e-25
 Identities = 55/124 (44%), Positives = 74/124 (59%), Gaps = 2/124 (1%)
 Frame = -2

Query: 373 VRILTYVRHVYDLKK-LISLNTLDSTGCNYKAEGGFIRISRRVMVVMKGK-REHDLYALQ 200
           +R L+ VRH+ +LK+ LISL TLD  G  Y    G +++++  +VVMK   +  +LY LQ
Sbjct: 170 IRTLSDVRHIPNLKRSLISLCTLDCKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLQ 229

Query: 199 XXXXXXXXXXXXXSDFDNDTTRLWHMWMGH*SERGLEVLSKQGLFDGQKTRKLDFCEHCL 20
                        S  ++D T LWHM +GH SE GL  LS +GL DGQ   KL FCEHC+
Sbjct: 230 GTTILGNVATVSDSLSNSDATNLWHMRLGHMSEIGLAELSMRGLLDGQSIGKLKFCEHCI 289

Query: 19  YGKH 8
           +GKH
Sbjct: 290 FGKH 293



 Score = 43.1 bits (100), Expect(2) = 3e-25
 Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
 Frame = -1

Query: 500 MCPNKVWFTSYHSIDGGKVLMGNIVACNV--IGSVRYK--SKCIMDCKD 366
           MCPN+ WF +Y  + GG VLMG+   C V  IG+V+ K    CI    D
Sbjct: 127 MCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSD 175


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1312

 Score = 95.5 bits (236), Expect(2) = 1e-24
 Identities = 54/124 (43%), Positives = 74/124 (59%), Gaps = 2/124 (1%)
 Frame = -2

Query: 373 VRILTYVRHVYDLKK-LISLNTLDSTGCNYKAEGGFIRISRRVMVVMKGK-REHDLYALQ 200
           +R L+ VRH+ +LK+ LISL TLD  G  Y    G +++++  +VVMK   +  +LY L+
Sbjct: 388 IRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLR 447

Query: 199 XXXXXXXXXXXXXSDFDNDTTRLWHMWMGH*SERGLEVLSKQGLFDGQKTRKLDFCEHCL 20
                        S  ++D T LWHM +GH SE GL  LSK+ L DGQ   KL FCEHC+
Sbjct: 448 GTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRELLDGQSIGKLKFCEHCI 507

Query: 19  YGKH 8
           +GKH
Sbjct: 508 FGKH 511



 Score = 43.5 bits (101), Expect(2) = 1e-24
 Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
 Frame = -1

Query: 500 MCPNKVWFTSYHSIDGGKVLMGNIVACNV--IGSVRYK 393
           MCPN+ WF +Y ++ GG VLMG+   C V  IG+V+ K
Sbjct: 345 MCPNRDWFATYEALQGGTVLMGDDTPCEVAGIGTVQIK 382


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score = 95.5 bits (236), Expect(2) = 1e-24
 Identities = 54/124 (43%), Positives = 74/124 (59%), Gaps = 2/124 (1%)
 Frame = -2

Query: 373 VRILTYVRHVYDLKK-LISLNTLDSTGCNYKAEGGFIRISRRVMVVMKGK-REHDLYALQ 200
           +R L+ VRH+ +LK+ LISL TLD  G  Y    G +++++  +VVMK   +  +LY L+
Sbjct: 388 IRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLR 447

Query: 199 XXXXXXXXXXXXXSDFDNDTTRLWHMWMGH*SERGLEVLSKQGLFDGQKTRKLDFCEHCL 20
                        S  ++D T LWHM +GH SE GL  LSK+ L DGQ   KL FCEHC+
Sbjct: 448 GTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRELLDGQSIGKLKFCEHCI 507

Query: 19  YGKH 8
           +GKH
Sbjct: 508 FGKH 511



 Score = 43.5 bits (101), Expect(2) = 1e-24
 Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
 Frame = -1

Query: 500 MCPNKVWFTSYHSIDGGKVLMGNIVACNV--IGSVRYK 393
           MCPN+ WF +Y ++ GG VLMG+   C V  IG+V+ K
Sbjct: 345 MCPNRDWFATYEALQGGTVLMGDDTPCEVAGIGTVQIK 382


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77548751|gb|ABA91548.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 2340

 Score = 97.4 bits (241), Expect(2) = 2e-24
 Identities = 54/124 (43%), Positives = 75/124 (60%), Gaps = 2/124 (1%)
 Frame = -2

Query: 373 VRILTYVRHVYDLKK-LISLNTLDSTGCNYKAEGGFIRISRRVMVVMKGK-REHDLYALQ 200
           +R L+ VRH+ +LK+ LISL TLD  G  Y    G +++++  +VVMK   +  +LY L+
Sbjct: 560 IRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLR 619

Query: 199 XXXXXXXXXXXXXSDFDNDTTRLWHMWMGH*SERGLEVLSKQGLFDGQKTRKLDFCEHCL 20
                        S  ++D T LWHM +GH +E GL  LSK+GL DGQ   KL FCEHC+
Sbjct: 620 GTTILGNVAAVSDSLSNSDATNLWHMRLGHMTEIGLAELSKRGLLDGQSIGKLKFCEHCI 679

Query: 19  YGKH 8
           +GKH
Sbjct: 680 FGKH 683



 Score = 40.8 bits (94), Expect(2) = 2e-24
 Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
 Frame = -1

Query: 500 MCPNKVWFTSYHSIDGGKVLMGNIVACNV--IGSVRYK--SKCIMDCKD 366
           MCPN+ WF +Y ++  G VLMG+   C V  IG+V+ K    CI    D
Sbjct: 517 MCPNRDWFATYEAVQVGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSD 565


>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
           gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
           Japonica Group]
          Length = 1601

 Score = 97.4 bits (241), Expect(2) = 2e-24
 Identities = 54/124 (43%), Positives = 75/124 (60%), Gaps = 2/124 (1%)
 Frame = -2

Query: 373 VRILTYVRHVYDLKK-LISLNTLDSTGCNYKAEGGFIRISRRVMVVMKGK-REHDLYALQ 200
           +R L+ VRH+ +LK+ LISL TLD  G  Y    G +++++  +VVMK   +  +LY L+
Sbjct: 353 IRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLR 412

Query: 199 XXXXXXXXXXXXXSDFDNDTTRLWHMWMGH*SERGLEVLSKQGLFDGQKTRKLDFCEHCL 20
                        S  ++D T LWHM +GH +E GL  LSK+GL DGQ   KL FCEHC+
Sbjct: 413 GTTILGNVAAVSDSLSNSDATNLWHMRLGHMTEIGLAELSKRGLLDGQSIGKLKFCEHCI 472

Query: 19  YGKH 8
           +GKH
Sbjct: 473 FGKH 476



 Score = 40.8 bits (94), Expect(2) = 2e-24
 Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
 Frame = -1

Query: 500 MCPNKVWFTSYHSIDGGKVLMGNIVACNV--IGSVRYK--SKCIMDCKD 366
           MCPN+ WF +Y ++  G VLMG+   C V  IG+V+ K    CI    D
Sbjct: 310 MCPNRDWFATYEAVQVGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSD 358


>ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group]
           gi|255672802|dbj|BAH90873.1| Os01g0116166 [Oryza sativa
           Japonica Group]
          Length = 778

 Score = 93.6 bits (231), Expect(2) = 3e-24
 Identities = 53/124 (42%), Positives = 73/124 (58%), Gaps = 2/124 (1%)
 Frame = -2

Query: 373 VRILTYVRHVYDLKK-LISLNTLDSTGCNYKAEGGFIRISRRVMVVMKGK-REHDLYALQ 200
           +R L+ VRH+ +LK+ LIS  TLD  G  Y    G +++++  +VVMK   +  +LY L+
Sbjct: 319 IRTLSDVRHIPNLKRSLISFCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLR 378

Query: 199 XXXXXXXXXXXXXSDFDNDTTRLWHMWMGH*SERGLEVLSKQGLFDGQKTRKLDFCEHCL 20
                        S  ++D T LWHM +GH SE GL  LSK+GL  GQ   KL FCEHC+
Sbjct: 379 GTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLYGQSIGKLKFCEHCI 438

Query: 19  YGKH 8
           +GKH
Sbjct: 439 FGKH 442



 Score = 44.3 bits (103), Expect(2) = 3e-24
 Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
 Frame = -1

Query: 500 MCPNKVWFTSYHSIDGGKVLMGNIVACNV--IGSVRYK--SKCIMDCKD 366
           MCPN+ WF +Y ++ GG VLMG+   C V  IG+V+ K    CI    D
Sbjct: 276 MCPNRDWFATYETVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSD 324


>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1211

 Score = 95.9 bits (237), Expect(2) = 1e-23
 Identities = 53/124 (42%), Positives = 75/124 (60%), Gaps = 2/124 (1%)
 Frame = -2

Query: 373 VRILTYVRHVYDLKK-LISLNTLDSTGCNYKAEGGFIRISRRVMVVMKGK-REHDLYALQ 200
           +R L+ VRH+ +LK+ LISL TLD     Y    G +++++  +VVMK   +  +LY ++
Sbjct: 353 IRTLSDVRHIPNLKRSLISLCTLDRKVYKYSGGDGILKVTKGSLVVMKADIKSANLYHVR 412

Query: 199 XXXXXXXXXXXXXSDFDNDTTRLWHMWMGH*SERGLEVLSKQGLFDGQKTRKLDFCEHCL 20
                        S +++D T LWHM +GH SE GL  LSK+GL DGQ   KL FCEHC+
Sbjct: 413 GTTILGNIAAVSDSLYNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSIGKLKFCEHCI 472

Query: 19  YGKH 8
           +GKH
Sbjct: 473 FGKH 476



 Score = 40.0 bits (92), Expect(2) = 1e-23
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = -1

Query: 500 MCPNKVWFTSYHSIDGGKVLMGNIVACNVIGSVRYKSKCIMDC 372
           MC N+ WF +Y ++ GG VLMG+   C V G    + K    C
Sbjct: 310 MCLNRDWFATYEAVQGGTVLMGDDTPCEVAGVETVQIKMFDGC 352


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
           copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score = 89.7 bits (221), Expect(3) = 2e-23
 Identities = 46/119 (38%), Positives = 68/119 (57%), Gaps = 1/119 (0%)
 Frame = -2

Query: 364 LTYVRHVYDL-KKLISLNTLDSTGCNYKAEGGFIRISRRVMVVMKGKREHDLYALQXXXX 188
           L  VRHV  + K LISL+ LDS G ++  + G +R+ +   +++KG     LY LQ    
Sbjct: 335 LNEVRHVPLMTKNLISLSLLDSKGFSWSGKDGVLRVWKGSNLILKGVMRGTLYFLQGSTV 394

Query: 187 XXXXXXXXXSDFDNDTTRLWHMWMGH*SERGLEVLSKQGLFDGQKTRKLDFCEHCLYGK 11
                         D T+LWH+ +GH  ERG+++LSK+ L  G K + L+FCEHC++GK
Sbjct: 395 TGSAHVASSEFHQKDMTKLWHIRLGHMGERGMQILSKEDLLAGHKVKSLEFCEHCVFGK 453



 Score = 42.7 bits (99), Expect(3) = 2e-23
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = -1

Query: 500 MCPNKVWFTSYHSIDGGKVLMGNIVACNVIGS 405
           +CP + WFT+Y  +DGG + M N   C V+G+
Sbjct: 289 ICPRREWFTTYEQVDGGSISMANSSVCKVVGT 320



 Score = 22.3 bits (46), Expect(3) = 2e-23
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 534 DEWSLDSACTYHV 496
           D W LDS  +YH+
Sbjct: 277 DVWVLDSGASYHI 289


>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score = 84.7 bits (208), Expect(3) = 3e-22
 Identities = 49/122 (40%), Positives = 69/122 (56%), Gaps = 2/122 (1%)
 Frame = -2

Query: 370 RILTYVRHVYDLKK-LISLNTLDSTGCNYKAEGGFIRISRRVMVVMKGKREHDLYALQXX 194
           RIL  VR+V  LKK LISL  L+S G       G ++ +   +V++KG  +++LY  Q  
Sbjct: 279 RILRDVRYVPKLKKNLISLGALESKGLVVTMRDGILKATSGALVMLKGVMKNNLYYYQGS 338

Query: 193 XXXXXXXXXXXSDF-DNDTTRLWHMWMGH*SERGLEVLSKQGLFDGQKTRKLDFCEHCLY 17
                      S   D + T+LWHM +GH  E+ L++ +KQGL  G K  KL+FCEHC+ 
Sbjct: 339 TVVGTVAAATSSSKKDAEATKLWHMRLGHAGEKSLQIFTKQGLLKGTKACKLEFCEHCVL 398

Query: 16  GK 11
           GK
Sbjct: 399 GK 400



 Score = 37.0 bits (84), Expect(3) = 3e-22
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -1

Query: 500 MCPNKVWFTSYHSIDGGKVLMGNIVACNVIG 408
           MCP + WF  +  +DGG V MGN   C  +G
Sbjct: 235 MCPIRDWFFEFQELDGGVVYMGNDNPCKTVG 265



 Score = 29.3 bits (64), Expect(3) = 3e-22
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = -3

Query: 534 DEWSLDSACTYHV 496
           DEW LDS CTYH+
Sbjct: 223 DEWILDSGCTYHM 235


>gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1262

 Score = 80.1 bits (196), Expect(3) = 7e-22
 Identities = 41/98 (41%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
 Frame = -2

Query: 298 GCNYKAEGGFIRISRRVMVVMKGK-REHDLYALQXXXXXXXXXXXXXSDFDNDTTRLWHM 122
           G  Y    G +++++  +VVMK   +  +LY L+             S  ++D T LWHM
Sbjct: 394 GYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHM 453

Query: 121 WMGH*SERGLEVLSKQGLFDGQKTRKLDFCEHCLYGKH 8
            +GH SE GL  LSK+GL DGQ  +KL FCEHC++GKH
Sbjct: 454 RLGHMSEIGLAELSKRGLLDGQSIKKLKFCEHCIFGKH 491



 Score = 40.0 bits (92), Expect(3) = 7e-22
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = -1

Query: 500 MCPNKVWFTSYHSIDGGKVLMGNIVACNVIG 408
           MC N+ WF +Y ++ GG VLMG+   C V G
Sbjct: 364 MCSNRDWFATYEAVQGGTVLMGDDTPCEVAG 394



 Score = 29.6 bits (65), Expect(3) = 7e-22
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = -3

Query: 558 AVCTSSSRDEWSLDSACTYHV 496
           A C  +S D+W LD+ACTYH+
Sbjct: 345 AGCAQTS-DQWILDTACTYHM 364


>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
           gi|20087076|gb|AAM10749.1|AC112514_2 Putative
           retroelement [Oryza sativa Japonica Group]
          Length = 1225

 Score = 80.1 bits (196), Expect(3) = 7e-22
 Identities = 41/98 (41%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
 Frame = -2

Query: 298 GCNYKAEGGFIRISRRVMVVMKGK-REHDLYALQXXXXXXXXXXXXXSDFDNDTTRLWHM 122
           G  Y    G +++++  +VVMK   +  +LY L+             S  ++D T LWHM
Sbjct: 340 GYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHM 399

Query: 121 WMGH*SERGLEVLSKQGLFDGQKTRKLDFCEHCLYGKH 8
            +GH SE GL  LSK+GL DGQ  +KL FCEHC++GKH
Sbjct: 400 RLGHMSEIGLAELSKRGLLDGQSIKKLKFCEHCIFGKH 437



 Score = 40.0 bits (92), Expect(3) = 7e-22
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = -1

Query: 500 MCPNKVWFTSYHSIDGGKVLMGNIVACNVIG 408
           MC N+ WF +Y ++ GG VLMG+   C V G
Sbjct: 310 MCSNRDWFATYEAVQGGTVLMGDDTPCEVAG 340



 Score = 29.6 bits (65), Expect(3) = 7e-22
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = -3

Query: 558 AVCTSSSRDEWSLDSACTYHV 496
           A C  +S D+W LD+ACTYH+
Sbjct: 291 AGCAQTS-DQWILDTACTYHM 310


>emb|CAN67902.1| hypothetical protein VITISV_037907 [Vitis vinifera]
          Length = 735

 Score = 87.4 bits (215), Expect(2) = 2e-21
 Identities = 50/123 (40%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
 Frame = -2

Query: 376 IVRILTYVRHVYDLKK-LISLNTLDSTGCNYKAEGGFIRISRRVMVVMKGKREHDLYALQ 200
           I R+L  VR++ +LKK LISL  LD +   +K E   +R++R  ++VMKG  +  LY L 
Sbjct: 43  IERVLEDVRYIPELKKNLISLGMLDESRYTFKLEPNSLRVARGSLIVMKGTIKIGLYTLI 102

Query: 199 XXXXXXXXXXXXXSDFDNDTTRLWHMWMGH*SERGLEVLSKQGLFDGQKTRKLDFCEHCL 20
                         D    TT+LWH  +GH S RGL+ L KQG+    K   L FCEHC+
Sbjct: 103 GQTVTSKVSTMLKEDMG--TTKLWHQRLGHISHRGLQELEKQGVLGNYKLTNLTFCEHCV 160

Query: 19  YGK 11
           +GK
Sbjct: 161 FGK 163



 Score = 40.8 bits (94), Expect(2) = 2e-21
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = -1

Query: 500 MCPNKVWFTSYHSIDGGKVLMGNIVACNVIGS 405
           MCP K WF ++   DGG VL+GN   C ++G+
Sbjct: 1   MCPIKTWFENFKEADGGHVLLGNNKHCKILGT 32


>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
          Length = 1643

 Score = 94.0 bits (232), Expect(2) = 6e-20
 Identities = 46/108 (42%), Positives = 63/108 (58%)
 Frame = -2

Query: 334 KKLISLNTLDSTGCNYKAEGGFIRISRRVMVVMKGKREHDLYALQXXXXXXXXXXXXXSD 155
           K LIS+ TLD  G  +   GG +R+S+  +VVMKG+ +H +Y L                
Sbjct: 685 KNLISVGTLDKNGYTFSGSGGVLRVSKGALVVMKGRLQHGIYTLMGSSVLGTAAVE---- 740

Query: 154 FDNDTTRLWHMWMGH*SERGLEVLSKQGLFDGQKTRKLDFCEHCLYGK 11
            +++ T LWH  +GH SE+GL +LSKQGL  G +T KL FCE C+ GK
Sbjct: 741 -EDNCTELWHRRLGHMSEKGLSILSKQGLLSGAETGKLKFCETCVMGK 787



 Score = 29.3 bits (64), Expect(2) = 6e-20
 Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
 Frame = -3

Query: 555 VCTSSSRDEWSLDSACTYHVS**GLVHFLSFD*WR*GS--YGKYCCLQCYWISTVQIKMH 382
           V TSSS + W LD+  +YH++      F +F  W  GS   G    L      +VQIKM+
Sbjct: 611 VSTSSSAESWILDTGASYHMA-YSRDLFTTFKEWN-GSVKLGDDGELGVKGSGSVQIKMY 668

Query: 381 NGL 373
           +GL
Sbjct: 669 DGL 671