BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia22_contig00031917
         (1242 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM01169.1|AC113336_21 Putative retroelement [Oryza sativa Ja...    84   2e-13
gb|AAX96433.1| retrotransposon protein, putative, Ty3-gypsy sub-...    83   3e-13
gb|ABA98110.1| retrotransposon protein, putative, Ty3-gypsy subc...    82   4e-13
gb|AAX96590.1| retrotransposon protein, putative, Ty3-gypsy sub-...    81   8e-13
emb|CAH65904.1| H0207B04.5 [Oryza sativa Indica Group]                 81   8e-13
gb|ABA96609.1| retrotransposon protein, putative, Ty3-gypsy subc...    80   1e-12
emb|CAH66282.1| OSIGBa0116O04.4 [Oryza sativa Indica Group]            80   1e-12
emb|CAH66120.1| OSIGBa0146N20.5 [Oryza sativa Indica Group]            80   1e-12
emb|CAH66151.1| OSIGBa0097I11.3 [Oryza sativa Indica Group]            80   1e-12
emb|CAH66289.1| OSIGBa0161P06.6 [Oryza sativa Indica Group]            80   1e-12
emb|CAH66150.1| OSIGBa0097I11.2 [Oryza sativa Indica Group]            80   1e-12
gb|AAM00970.1|AC021892_34 Putative retroelement [Oryza sativa Ja...    80   2e-12
emb|CAH66283.1| OSIGBa0116O04.5 [Oryza sativa Indica Group]            80   2e-12
gb|AAV31373.1| putative polyprotein [Oryza sativa Japonica Group]      80   2e-12
emb|CAD41692.1| OSJNBb0015D13.7 [Oryza sativa Japonica Group]          80   2e-12
dbj|BAH80025.1| putative retrotransposon protein [Oryza sativa I...    79   3e-12
gb|ABB46921.2| retrotransposon protein, putative, Ty3-gypsy subc...    79   4e-12
emb|CAE04985.3| OSJNBa0057M08.11 [Oryza sativa Japonica Group]         79   4e-12
gb|ABB47191.1| retrotransposon protein, putative, Ty3-gypsy subc...    79   5e-12
gb|AAX95143.1| retrotransposon protein, putative, Ty3-gypsy sub-...    78   7e-12

>gb|AAM01169.1|AC113336_21 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1449

 Score = 83.6 bits (205), Expect = 2e-13
 Identities = 101/396 (25%), Positives = 153/396 (38%), Gaps = 36/396 (9%)
 Frame = -1

Query: 1125 LLALSIRIVSLCPREFLGTKGAVAAQIWIQEVKRHLEILGCTPTEEICLTRY*LIGDARL 946
            +LA   ++++L P  F  T   V A  W+  V++ L+++ CT  E++    + L G A  
Sbjct: 28   ILAQQTQLINL-PPTFSSTTNPVEAGDWLHAVEKKLDLIQCTEQEKVSFASHQLHGPAAE 86

Query: 945  WWDTCIHHYGQERL--DALT*YEFCQMFER*FISTFEKAKLKEQYKSLVQGQMIVEEYYR 772
            WWD    H+ Q R   + +T  EF   F++  I T   A  K ++++L QG   V EY  
Sbjct: 87   WWD----HFRQGRAGGEPITWQEFTAAFKKTHIPTGVVALKKREFRALNQGSRSVTEYLH 142

Query: 771  RFDHL*FYTYSE--TEADRVAIFKKGFILSIQHKVGYLQFDSVLDAVICAFDAESVNTRL 598
             F+ L  Y   +  T+ +R   F +G    + + +   +F      V  A   E    R+
Sbjct: 143  DFNRLARYAPEDVHTDEERQEKFLEGLNDELSYTLMSTEFRDFQQLVDKAIRQEDKYNRM 202

Query: 597  C*DGDFKKRKFGQ-SSQFGSRPGS*TSPGTNCPL*T---------------NDKTGDSNN 466
                + KKR+  Q  +Q GS       PG   P                  N+ TG+  N
Sbjct: 203  ----EQKKRRAAQFKAQQGSNQRPRLIPGPQVPSYPQGGSSSVVRPQRQFYNNNTGNRGN 258

Query: 465  QGK----------------RKYTRGFRGIYFNCNRNGHKFEDYRFPGGGAQVPRTQNQVV 334
            + +                RK       I FNC   GH  +           PR    V 
Sbjct: 259  ENRNVVARPAATPVQNQPVRKEQGSKPVICFNCGDPGHYADK-------CPKPRHVKNVP 311

Query: 333  *PVNNRAPGQQLVNAL*NQRLVNQHTHDANRQPLGN*VFAL*DEQDGVEGTLHILSTTAR 154
             P N+  P  +        R+ +    +A   P            D V GT  + S  A 
Sbjct: 312  VPNNSNVPAPK-------ARVNHVAAAEAQNAP------------DVVLGTFPVNSIPAT 352

Query: 153  VLFDTGAARSFIPH*FAHRLSLNV*LLVEPIRVYPP 46
            VLFD+GA  SF+   FA +  + V  L  P+ V  P
Sbjct: 353  VLFDSGATHSFLSKSFATKHGMEVVSLGRPLLVNTP 388


>gb|AAX96433.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
            Japonica Group] gi|77550058|gb|ABA92855.1|
            retrotransposon protein, putative, Ty3-gypsy subclass
            [Oryza sativa Japonica Group]
          Length = 1636

 Score = 82.8 bits (203), Expect = 3e-13
 Identities = 99/396 (25%), Positives = 154/396 (38%), Gaps = 27/396 (6%)
 Frame = -1

Query: 1131 NSLLALSIRIVSLCPREFLGTKGAVAAQIWIQEVKRHLEILGCTPTEEICLTRY*LIGDA 952
            N+ LA  IR+    P  F  T   V A  W+  +++ L++L CT  E++    + L G A
Sbjct: 220  NNKLAEFIRVR---PPTFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPA 276

Query: 951  RLWWDTCIHHYGQERLDA--LT*YEFCQMFER*FISTFEKAKLKEQYKSLVQGQMIVEEY 778
              WWD    H+   R  A  +T  EF   F +  I +   +  K++++SL QG   V EY
Sbjct: 277  SKWWD----HFRLNRTTAEPITWLEFTAAFRKTHIPSGAVSLKKKEFRSLTQGSRTVTEY 332

Query: 777  YRRFDHL*FYTYSE--TEADRVAIFKKGFILSIQHKV---GYLQFDSVLDAVICAFDA-- 619
               F+ L  Y   +  T+ +R   F +G    + + +    Y  F  ++D  I   D   
Sbjct: 333  LHEFNRLARYAPEDVRTDEERQERFLEGLNDELSYPLMTGDYHDFQKLVDKAIRQEDKYN 392

Query: 618  --ESVNTRLC*----DGDFKKRKFGQSSQFGSRPGS*TSPGTNCPL*TNDKTGDSNNQGK 457
              E    R+       G+ ++ +     Q   + GS +     C    N+   +  NQ  
Sbjct: 393  RMEQKKRRIAHFKAQQGNSQRPRLTLGPQSMPQGGSSSVVRPQCQFFNNNAGNNIRNQAP 452

Query: 456  R-----------KYTRGFR-GIYFNCNRNGHKFEDYRFPGGGAQVPRTQNQVV*PVNNRA 313
            R           K  +G + G+ FNC   GH  +    P     VP   N         A
Sbjct: 453  RPVAAPTQQQPAKREQGSKPGVCFNCGDPGHYSDKCSKPRRVKVVPAQSNST-------A 505

Query: 312  PGQQLVNAL*NQRLVNQHTHDANRQPLGN*VFAL*DEQDGVEGTLHILSTTARVLFDTGA 133
            P  +        R+ +    +A   P            D + GT  + S    VLFD+GA
Sbjct: 506  PASKA-------RVNHVAATEAQGAP------------DVILGTFLVNSVPTTVLFDSGA 546

Query: 132  ARSFIPH*FAHRLSLNV*LLVEPIRVYPPLGAQLTL 25
              SF+   FA    + V  L+ P+ V  P    L+L
Sbjct: 547  THSFLSMSFAGNHGMEVEDLIRPLMVSTPSNQALSL 582


>gb|ABA98110.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1226

 Score = 82.4 bits (202), Expect = 4e-13
 Identities = 99/384 (25%), Positives = 147/384 (38%), Gaps = 39/384 (10%)
 Frame = -1

Query: 1089 PREFLGTKGAVAAQIWIQEVKRHLEILGCTPTEEICLTRY*LIGDARLWWDTCIHHYGQE 910
            P  F  T   V A  W+  V++ L+++ CT  E++    + L G A  WWD    H+ Q 
Sbjct: 69   PPTFSSTTNPVEAGDWLHAVEKKLDLIQCTEQEKVSFASHQLHGPAAEWWD----HFRQG 124

Query: 909  RLDA--LT*YEFCQMFER*FISTFEKAKLKEQYKSLVQGQMIVEEYYRRFDHL*FYTYSE 736
            R +   +T  EF   F++  I T   A  K ++++L QG   V EY   F+ L  Y   +
Sbjct: 125  RAEGEPITWQEFTAAFKKTHIPTGVVALKKREFRALNQGSRSVTEYLHDFNRLARYAPED 184

Query: 735  --TEADRVAIFKKGFILSIQHKVGYLQFDSVLDAVICAFDAESVNTRLC*DGDFKKRKFG 562
              T+ +R   F +G    + + +    F      V  A   E    R+    + KKR+  
Sbjct: 185  VRTDEERQEKFLEGLNDELSYALMSTDFRDFQQLVDKAIRQEDKYNRM----EQKKRR-- 238

Query: 561  QSSQFGSRPGS*TSP----GTNCPL*T---------------NDKTGD------------ 475
             ++QF ++ GS   P    G   PL                 N+ TG+            
Sbjct: 239  -AAQFKAQQGSNQRPRLVTGPQAPLYPQGGSSSVIRPQRQFYNNNTGNRGNDNRNMVARP 297

Query: 474  ----SNNQGKRKYTRGFRGIYFNCNRNGHKFEDYRFPGGGAQVPRTQNQVV*PVNNRAPG 307
                + NQ  RK      G+ FNC   GH  +           PR       P N+ AP 
Sbjct: 298  VATLAQNQPVRKEQGSKPGVCFNCGDPGHYADK-------CPKPRRVKNAPAPNNSNAPA 350

Query: 306  QQLVNAL*NQRLVNQHTHDANRQPLGN*VFAL*DEQDGVEGTLHILSTTARVLFDTGAAR 127
             +        R+ +    +A   P            D V GT  + S  A VLFD+GA  
Sbjct: 351  PK-------ARVNHVAAAEAQNAP------------DVVLGTFPVNSIPASVLFDSGATH 391

Query: 126  SFIPH*FAHRLSLNV*LLVEPIRV 55
            SF+   FA    + V  L  P+ V
Sbjct: 392  SFLSKSFASNHGMEVISLGRPLLV 415


>gb|AAX96590.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
            Japonica Group] gi|77550403|gb|ABA93200.1|
            retrotransposon protein, putative, Ty3-gypsy subclass
            [Oryza sativa Japonica Group]
          Length = 1640

 Score = 81.3 bits (199), Expect = 8e-13
 Identities = 99/387 (25%), Positives = 146/387 (37%), Gaps = 39/387 (10%)
 Frame = -1

Query: 1089 PREFLGTKGAVAAQIWIQEVKRHLEILGCTPTEEICLTRY*LIGDARLWWDTCIHHYGQE 910
            P  F  T   V A IW+  V++ L+++ CT  E++    + L G A  WWD    H+ Q 
Sbjct: 384  PATFSSTTNPVEAGIWLHAVEKKLDLIQCTEQEKVSFASHQLHGPAAEWWD----HFRQN 439

Query: 909  RL--DALT*YEFCQMFER*FISTFEKAKLKEQYKSLVQGQMIVEEYYRRFDHL*FYTYSE 736
            R   D +T  EF   F++  I     A  K ++++L QG   V EY   F+HL  Y   +
Sbjct: 440  RAEGDPITWQEFTAAFKKTHIPLGVVALKKREFRALNQGSHSVTEYLHDFNHLARYAPED 499

Query: 735  --TEADRVAIFKKGFILSIQHKVGYLQFDSVLDAVICAFDAESVNTRLC*DGDFKKRKFG 562
              T+ +R   F +G    + + +    +      V  A   E    R+    + KKR+  
Sbjct: 500  VLTDEERQEKFLEGLNDELSYALMSTDYQDFQQLVDKAIRQEDKYNRM----EQKKRR-- 553

Query: 561  QSSQFGSRPGS*TSP---------------------------GTNCPL*TNDK------- 484
             ++QF ++ GS   P                             N    +ND        
Sbjct: 554  -AAQFKAQQGSSQRPRIALGPQAAPYPQGGFSSVTRPQRQFYNNNTGNRSNDNRNVVARP 612

Query: 483  -TGDSNNQGKRKYTRGFRGIYFNCNRNGHKFEDYRFPGGGAQVPRTQNQVV*PVNNRAPG 307
                + NQ  RK      G+ FNC   GH  +    P      P  QN      N+ AP 
Sbjct: 613  VAAPTQNQPIRKEQGSKLGVCFNCGDPGHYADKCPKPRCVKNAP-VQN------NSNAPA 665

Query: 306  QQLVNAL*NQRLVNQHTHDANRQPLGN*VFAL*DEQDGVEGTLHILSTTARVLFDTGAAR 127
             +        R+ +    +A   P            D V GT  + S  A VLFD+GA  
Sbjct: 666  PK-------ARVNHVAVAEAQNAP------------DVVLGTFPVNSIPAFVLFDSGATH 706

Query: 126  SFIPH*FAHRLSLNV*LLVEPIRVYPP 46
            SF+   FA    + V  L  P+ V  P
Sbjct: 707  SFLSKSFASNHGMEVISLGRPLLVNTP 733


>emb|CAH65904.1| H0207B04.5 [Oryza sativa Indica Group]
          Length = 1481

 Score = 81.3 bits (199), Expect = 8e-13
 Identities = 100/387 (25%), Positives = 150/387 (38%), Gaps = 39/387 (10%)
 Frame = -1

Query: 1089 PREFLGTKGAVAAQIWIQEVKRHLEILGCTPTEEICLTRY*LIGDARLWWDTCIHHYGQE 910
            P  F  T   V A  W+  V++ L+++ CT  E++    + L G A  WWD    H+ Q 
Sbjct: 71   PPTFSSTTNPVEAGDWLHAVEKKLDLIQCTEQEKVSFASHQLHGPAAEWWD----HFRQG 126

Query: 909  RL--DALT*YEFCQMFER*FISTFEKAKLKEQYKSLVQGQMIVEEYYRRFDHL*FYTYSE 736
            R+  + +T  EF   F++  I T   A  K ++++L QG   V EY   F+ L  Y   +
Sbjct: 127  RVGGEPITWQEFTAAFKKTHIPTGVVALKKREFRALNQGSRSVTEYLHDFNRLARYAPED 186

Query: 735  --TEADRVAIFKKGFILSIQHKVGYLQFDSVLDAVICAFDAESVNTRLC*DGDFKKRKFG 562
              T+ +R   F +G    + + +   +F      V  A   E    R+    + KKR+  
Sbjct: 187  VRTDEERQEKFLEGLNDELSYTLMSTEFRDFQQLVDKAIRQEDKYNRM----EQKKRR-- 240

Query: 561  QSSQFGSRPGS*TSP----GTNCPL*T---------------NDKTGD------------ 475
             ++QF ++ GS   P    G+  P                  N+ TG+            
Sbjct: 241  -AAQFKAQQGSNQRPRLVTGSQVPSYPQVGSSSVVRPQRQFYNNNTGNRGNGNRNVVVRP 299

Query: 474  ----SNNQGKRKYTRGFRGIYFNCNRNGHKFEDYRFPGGGAQVPRTQNQVV*PVNNRAPG 307
                + NQ  RK   G   I FNC   GH  +    P      P + N      N  AP 
Sbjct: 300  AVTPTQNQPVRKEQGGKPVICFNCGDPGHYADKCPKPRRVKNAPASTNS-----NVPAPK 354

Query: 306  QQLVNAL*NQRLVNQHTHDANRQPLGN*VFAL*DEQDGVEGTLHILSTTARVLFDTGAAR 127
             ++            H   A  Q          +  D V GT  + S  A VLFD+GA  
Sbjct: 355  ARV-----------NHVAAAEAQ----------NAPDVVLGTFPVNSIPATVLFDSGATH 393

Query: 126  SFIPH*FAHRLSLNV*LLVEPIRVYPP 46
            SF+   FA +  + V  L  P+ V  P
Sbjct: 394  SFLSKSFASKHGMEVVSLGRPLLVNTP 420


>gb|ABA96609.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1556

 Score = 80.5 bits (197), Expect = 1e-12
 Identities = 100/390 (25%), Positives = 147/390 (37%), Gaps = 41/390 (10%)
 Frame = -1

Query: 1092 CPREFLGTKGAVAAQIWIQEVKRHLEILGCTPTEEICLTRY*LIGDARLWWDTCIHHYGQ 913
            CP EF  T   V A  W+++V R L  + CTP E+     + L G A  WW+   + + +
Sbjct: 146  CPPEFSQTVEPVEADDWLKDVDRKLNFVQCTPVEKTLYASHQLRGPAADWWENYCNAHPE 205

Query: 912  ERLDALT*YEFCQMFER*FISTFEKAKLKEQYKSLVQGQMIVEEYYRRFDHL*FYTYSET 733
                A    EF   F    +        KE++  L QG   V EY  +F+ L  Y   E 
Sbjct: 206  PTNIAWD--EFATAFRAAHVPESTIDMKKEEFNRLKQGNSSVNEYLSQFNKLARYAPEEV 263

Query: 732  EADRVAI--FKKGFILSIQHKV---GYLQFDSVLDAVICAFDAESVNTRLC*DGDFKKRK 568
            + D+  I  F KG  + ++ ++    +  F  +++  +   DA    T      ++KKRK
Sbjct: 264  DTDKKKIRKFLKGIAVGMRLQLLAHDFPTFQHMINKALLLEDARKEATE-----EYKKRK 318

Query: 567  ---------------FGQSSQF-------GSRPGS*TSPGTNCPL*TNDKTGDSNNQGKR 454
                           +GQ  Q+         +PG    P  N P     +   S N    
Sbjct: 319  SNHQGNSSRGAPRPRYGQPMQYHQSVTQANHQPGYAPRPQMNRPAPQPQQRAPSGNTAPN 378

Query: 453  KYT-----RGFRGIY-FNCNRNGHKFEDYRFPGGGAQVPR----TQNQVV*PVNNRAPGQ 304
              T     +G   +  F CNR GH            Q PR    T +        R P  
Sbjct: 379  SVTSFKSPQGPSAVQCFRCNRMGHY---------ARQCPRNPTNTNSGHANGSTARTPAP 429

Query: 303  QLVNAL*NQRLVNQHTHDANRQPLG--N*VFA--L*DEQDGVEGTLHILSTTARVLFDTG 136
                +L + +   Q +  +N    G  N + A    D  D V G   + S  A VLFD+G
Sbjct: 430  AAAQSLPSSQASGQGSRASNHFGRGRVNHIQAETAQDAPDVVMGMFSVNSVPAIVLFDSG 489

Query: 135  AARSFIPH*FAHRLSLNV*LLVEPIRVYPP 46
            A+ SFI   F  R       L  P+ V+ P
Sbjct: 490  ASHSFISQAFVKRNGWKTQNLRVPMIVHSP 519


>emb|CAH66282.1| OSIGBa0116O04.4 [Oryza sativa Indica Group]
          Length = 1527

 Score = 80.5 bits (197), Expect = 1e-12
 Identities = 101/367 (27%), Positives = 149/367 (40%), Gaps = 19/367 (5%)
 Frame = -1

Query: 1089 PREFLGTKGAVAAQIWIQEVKRHLEILGCTPTEEICLTRY*LIGDARLWWDTCIHHYGQE 910
            P  F  T   V A  W+  V++ L+++ CT  E++    + L G A  WWD    H+ Q 
Sbjct: 331  PPTFSSTTNPVEAGDWLHAVEKKLDLIQCTEQEKVSFASHQLHGPAAEWWD----HFRQG 386

Query: 909  RL--DALT*YEFCQMFER*FISTFEKAKLKEQYKSLVQGQMIVEEYYRRFDHL*FYTYSE 736
            R   + +T  EF   F++  I T   A  K ++++L QG   V EY   F+ L  Y   +
Sbjct: 387  RAGGEPITWQEFIAAFKKTHIPTGVVALKKREFRALNQGSRSVTEYLHDFNRLARYAPED 446

Query: 735  --TEADRVAIFKKGFILSIQHKVGYLQFDSVLDAVICAFDAESVNTRLC*DGDFKKRKFG 562
              T+ +R   F +G    + + +   +F      V  A   E    R+    + KKR+  
Sbjct: 447  VRTDEERQEKFLEGLNDELSYTLMSTEFRDFQQLVDKAIRQEDKYNRM----EQKKRR-- 500

Query: 561  QSSQFGSRPGS*TSPGTNCPL*TNDKTGDSNNQGKRKYTRGFRGIYFNCNRNGHKFEDYR 382
             ++QF ++ GS   P     L T  +       G     R  R  Y   N  G++  D R
Sbjct: 501  -AAQFKAQQGSNQRP----RLVTGPQVPSYPQGGSSSVVRSQRQFY--NNNTGNRGNDNR 553

Query: 381  FPGGGAQVPRTQNQVV------*PV---NNRAPGQQLVNAL*NQRLVNQHTHDANRQPLG 229
                      TQNQ V       PV   N   PG         +R+ N    + +  P  
Sbjct: 554  NVVVRPAATSTQNQPVRKEQGSKPVICFNCGDPGHYADKCPKPRRVKNASAPNNSNVPAP 613

Query: 228  ----N*VFAL*DEQ--DGVEGTLHILSTTARVLFDTGAARSFIPH*FAHRLSLNV*LLVE 67
                N V A   +   D V GT  + S  A VLFD+GA  SF+   FA +  + V  L  
Sbjct: 614  KARVNHVAAAEAQNAPDVVLGTFPVNSIPATVLFDSGATHSFLSKSFASKHGMEVVSLGR 673

Query: 66   PIRVYPP 46
            P+ V  P
Sbjct: 674  PLLVNTP 680


>emb|CAH66120.1| OSIGBa0146N20.5 [Oryza sativa Indica Group]
          Length = 1481

 Score = 80.5 bits (197), Expect = 1e-12
 Identities = 102/367 (27%), Positives = 148/367 (40%), Gaps = 19/367 (5%)
 Frame = -1

Query: 1089 PREFLGTKGAVAAQIWIQEVKRHLEILGCTPTEEICLTRY*LIGDARLWWDTCIHHYGQE 910
            P  F  T   V A  W+  V++ L+++ CT  E++    + L G A  WWD    H+ Q 
Sbjct: 71   PPTFSSTTNPVEAGDWLHAVEKKLDLIQCTEQEKVSFASHQLHGPAAEWWD----HFRQG 126

Query: 909  RL--DALT*YEFCQMFER*FISTFEKAKLKEQYKSLVQGQMIVEEYYRRFDHL*FYTYSE 736
            R   + +T  EF   F +  I T   A  K ++++L QG   V EY   F+ L  Y   +
Sbjct: 127  RAGGEPITWQEFTAAFRKTHIPTGVVALKKREFRALNQGSRSVTEYLHDFNRLARYAPED 186

Query: 735  --TEADRVAIFKKGFILSIQHKVGYLQFDSVLDAVICAFDAESVNTRLC*DGDFKKRKFG 562
              T+ +R   F +G    + + +   +F      V  A   E    R+    + KKR+  
Sbjct: 187  VRTDEERQEKFLEGLNDELSYALMSTEFRDFQQLVDKAIRQEDKYNRM----EQKKRR-- 240

Query: 561  QSSQFGSRPGS*TSPGTNCPL*TNDKTGDSNNQGKRKYTRGFRGIYFNCNRNGHKFEDYR 382
             ++QF S+ GS   P     L T  +       G     R  R  Y   N  G++  D R
Sbjct: 241  -AAQFKSQQGSNQRP----RLVTGPQAPSYPQGGSSSVVRPQRQFY--NNNTGNRGNDNR 293

Query: 381  FPGGGAQVPRTQNQVV------*PV---NNRAPGQQLVNAL*NQRLVNQHTHDANRQPLG 229
                       QNQ V       PV   N   PG         +R+ N  T + +  P  
Sbjct: 294  NVVTRPAATPVQNQPVRKDQGSKPVICFNCGDPGHYADKCPKPRRVKNAPTSNNSNVPAP 353

Query: 228  ----N*VFAL*DEQ--DGVEGTLHILSTTARVLFDTGAARSFIPH*FAHRLSLNV*LLVE 67
                N V A   +   D V GT  + S  A VLFD+GA  SF+   FA +  + V  L  
Sbjct: 354  KARVNHVAAAEAQNAPDVVLGTFPVNSIPATVLFDSGATHSFLSKSFASKHGMEVVSLGR 413

Query: 66   PIRVYPP 46
            P+ V  P
Sbjct: 414  PLLVNTP 420


>emb|CAH66151.1| OSIGBa0097I11.3 [Oryza sativa Indica Group]
          Length = 1477

 Score = 80.5 bits (197), Expect = 1e-12
 Identities = 101/367 (27%), Positives = 149/367 (40%), Gaps = 19/367 (5%)
 Frame = -1

Query: 1089 PREFLGTKGAVAAQIWIQEVKRHLEILGCTPTEEICLTRY*LIGDARLWWDTCIHHYGQE 910
            P  F  T   V A  W+  V++ L+++ CT  E++    + L G A  WWD    H+ Q 
Sbjct: 281  PPTFSSTTNPVEAGDWLHAVEKKLDLIQCTEQEKVSFASHQLHGPAAEWWD----HFRQG 336

Query: 909  RL--DALT*YEFCQMFER*FISTFEKAKLKEQYKSLVQGQMIVEEYYRRFDHL*FYTYSE 736
            R   + +T  EF   F++  I T   A  K ++++L QG   V EY   F+ L  Y   +
Sbjct: 337  RAGGEPITWQEFIAAFKKTHIPTGVVALKKREFRALNQGSRSVTEYLHDFNRLARYAPED 396

Query: 735  --TEADRVAIFKKGFILSIQHKVGYLQFDSVLDAVICAFDAESVNTRLC*DGDFKKRKFG 562
              T+ +R   F +G    + + +   +F      V  A   E    R+    + KKR+  
Sbjct: 397  VRTDEERQEKFLEGLNDELSYTLMSTEFRDFQQLVDKAIRQEDKYNRM----EQKKRR-- 450

Query: 561  QSSQFGSRPGS*TSPGTNCPL*TNDKTGDSNNQGKRKYTRGFRGIYFNCNRNGHKFEDYR 382
             ++QF ++ GS   P     L T  +       G     R  R  Y   N  G++  D R
Sbjct: 451  -AAQFKAQQGSNQRP----RLVTGPQVPSYPQGGSSSVVRSQRQFY--NNNTGNRGNDNR 503

Query: 381  FPGGGAQVPRTQNQVV------*PV---NNRAPGQQLVNAL*NQRLVNQHTHDANRQPLG 229
                      TQNQ V       PV   N   PG         +R+ N    + +  P  
Sbjct: 504  NVVVRPAATSTQNQPVRKEQGSKPVICFNCGDPGHYADKCPKPRRVKNASAPNNSNVPAP 563

Query: 228  ----N*VFAL*DEQ--DGVEGTLHILSTTARVLFDTGAARSFIPH*FAHRLSLNV*LLVE 67
                N V A   +   D V GT  + S  A VLFD+GA  SF+   FA +  + V  L  
Sbjct: 564  KARVNHVAAAEAQNAPDVVLGTFPVNSIPATVLFDSGATHSFLSKSFASKHGMEVVSLGR 623

Query: 66   PIRVYPP 46
            P+ V  P
Sbjct: 624  PLLVNTP 630


>emb|CAH66289.1| OSIGBa0161P06.6 [Oryza sativa Indica Group]
          Length = 1433

 Score = 80.5 bits (197), Expect = 1e-12
 Identities = 101/367 (27%), Positives = 148/367 (40%), Gaps = 19/367 (5%)
 Frame = -1

Query: 1089 PREFLGTKGAVAAQIWIQEVKRHLEILGCTPTEEICLTRY*LIGDARLWWDTCIHHYGQE 910
            P  F  T   V A  W+  V++ L+++ CT  E++    + L G A  WWD    H+ Q 
Sbjct: 71   PPTFSSTTNPVEAGDWLHAVEKKLDLIQCTEQEKVSFASHQLHGPAAEWWD----HFRQG 126

Query: 909  RL--DALT*YEFCQMFER*FISTFEKAKLKEQYKSLVQGQMIVEEYYRRFDHL*FYTYSE 736
            R   + +T  EF   F +  I T   A  K ++++L QG   V EY   F+ L  Y   +
Sbjct: 127  RAGGEPITWQEFTAAFRKTHIPTGVVALKKREFRALNQGSRSVTEYLHDFNRLARYAPED 186

Query: 735  --TEADRVAIFKKGFILSIQHKVGYLQFDSVLDAVICAFDAESVNTRLC*DGDFKKRKFG 562
              T+ +R   F +G    + + +   +F      V  A   E    R+    + KKR+  
Sbjct: 187  VRTDEERQEKFLEGLNDELSYTLMSTEFRDFQQLVDKAIRQEDKYNRM----EQKKRR-- 240

Query: 561  QSSQFGSRPGS*TSPGTNCPL*TNDKTGDSNNQGKRKYTRGFRGIYFNCNRNGHKFEDYR 382
             ++QF S+ GS   P     L T  +    +  G     R  R  Y   N  G++  D R
Sbjct: 241  -AAQFKSQQGSNQRP----RLVTGPQVPSYSQGGSSSVVRPQRQFY--NNNTGNRGNDNR 293

Query: 381  FPGGGAQVPRTQNQVV------*PV---NNRAPGQQLVNAL*NQRLVNQHTHDANRQPLG 229
                       QNQ V       PV   N   PG         +R+ N    + +  P  
Sbjct: 294  NVVARPAATSVQNQPVRKDQGSKPVICFNCGDPGHYADKCPKPRRVKNAPVPNNSNVPAP 353

Query: 228  ----N*VFAL*DEQ--DGVEGTLHILSTTARVLFDTGAARSFIPH*FAHRLSLNV*LLVE 67
                N V A   +   D V GT  + S  A VLFD+GA  SF+   FA +  + V  L  
Sbjct: 354  KARVNHVAAAEAQNAPDVVLGTFPVNSIPATVLFDSGATHSFLSKSFASKHGMEVVSLGR 413

Query: 66   PIRVYPP 46
            P+ V  P
Sbjct: 414  PLLVNSP 420


>emb|CAH66150.1| OSIGBa0097I11.2 [Oryza sativa Indica Group]
          Length = 1527

 Score = 80.5 bits (197), Expect = 1e-12
 Identities = 101/367 (27%), Positives = 149/367 (40%), Gaps = 19/367 (5%)
 Frame = -1

Query: 1089 PREFLGTKGAVAAQIWIQEVKRHLEILGCTPTEEICLTRY*LIGDARLWWDTCIHHYGQE 910
            P  F  T   V A  W+  V++ L+++ CT  E++    + L G A  WWD    H+ Q 
Sbjct: 331  PPTFSSTTNPVEAGDWLHAVEKKLDLIQCTEQEKVSFASHQLHGPAAEWWD----HFRQG 386

Query: 909  RL--DALT*YEFCQMFER*FISTFEKAKLKEQYKSLVQGQMIVEEYYRRFDHL*FYTYSE 736
            R   + +T  EF   F++  I T   A  K ++++L QG   V EY   F+ L  Y   +
Sbjct: 387  RAGGEPITWQEFIAAFKKTHIPTGVVALKKREFRALNQGSRSVTEYLHDFNRLARYAPED 446

Query: 735  --TEADRVAIFKKGFILSIQHKVGYLQFDSVLDAVICAFDAESVNTRLC*DGDFKKRKFG 562
              T+ +R   F +G    + + +   +F      V  A   E    R+    + KKR+  
Sbjct: 447  VRTDEERQEKFLEGLNDELSYTLMSTEFRDFQQLVDKAIRQEDKYNRM----EQKKRR-- 500

Query: 561  QSSQFGSRPGS*TSPGTNCPL*TNDKTGDSNNQGKRKYTRGFRGIYFNCNRNGHKFEDYR 382
             ++QF ++ GS   P     L T  +       G     R  R  Y   N  G++  D R
Sbjct: 501  -AAQFKAQQGSNQRP----RLVTGPQVPSYPQGGSSSVVRSQRQFY--NNNTGNRGNDNR 553

Query: 381  FPGGGAQVPRTQNQVV------*PV---NNRAPGQQLVNAL*NQRLVNQHTHDANRQPLG 229
                      TQNQ V       PV   N   PG         +R+ N    + +  P  
Sbjct: 554  NVVVRPAATSTQNQPVRKEQGSKPVICFNCGDPGHYADKCPKPRRVKNASAPNNSNVPAP 613

Query: 228  ----N*VFAL*DEQ--DGVEGTLHILSTTARVLFDTGAARSFIPH*FAHRLSLNV*LLVE 67
                N V A   +   D V GT  + S  A VLFD+GA  SF+   FA +  + V  L  
Sbjct: 614  KARVNHVAAAEAQNAPDVVLGTFPVNSIPATVLFDSGATHSFLSKSFASKHGMEVVSLGR 673

Query: 66   PIRVYPP 46
            P+ V  P
Sbjct: 674  PLLVNTP 680


>gb|AAM00970.1|AC021892_34 Putative retroelement [Oryza sativa Japonica Group]
            gi|78708151|gb|ABB47126.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 1425

 Score = 80.1 bits (196), Expect = 2e-12
 Identities = 87/353 (24%), Positives = 141/353 (39%), Gaps = 5/353 (1%)
 Frame = -1

Query: 1089 PREFLGTKGAVAAQIWIQEVKRHLEILGCTPTEEICLTRY*LIGDARLWWDTCIHHYGQE 910
            P  F  T   + A  W+  +++ L +L C   E++    + L G A  WWD   H   + 
Sbjct: 100  PPTFSSTTNPMEANDWLHAIEKKLNLLQCNDQEKVAFATHQLQGPASAWWDN--HMATRP 157

Query: 909  RLDALT*YEFCQMFER*FISTFEKAKLKEQYKSLVQGQMIVEEYYRRFDHL*FYTYSE-- 736
                +T  EFC+ F++  +     A+ K ++++L QG   V EY   F+ L  Y   +  
Sbjct: 158  PGTEVTWAEFCRSFKKAQVPDGVVAQKKREFRALHQGNRTVTEYLHEFNRLARYAPEDVR 217

Query: 735  TEADRVAIFKKGFILSIQHKV---GYLQFDSVLDAVICAFDAESVNTRLC*DGDFKKRKF 565
            T+A++   F  G    + +++    Y  F+ ++D  I   D  +   R     +F +   
Sbjct: 218  TDAEKQEKFLAGLDDELTNQLISGDYADFERLVDKAIRQEDQRNKMDR---KSNFPQGAS 274

Query: 564  GQSSQFGSRPGS*TSPGTNCPL*TNDKTGDSNNQGKRKYTRGFRGIYFNCNRNGHKFEDY 385
            G  +  G +P    +P    P     ++G S     +K T    G  FNC   GH F D 
Sbjct: 275  GSQNHHGGQPNRGAAPR---PPMAPAQSGPSAQ--AKKETGAKPGSCFNCGELGH-FAD- 327

Query: 384  RFPGGGAQVPRTQNQVV*PVNNRAPGQQLVNAL*NQRLVNQHTHDANRQPLGN*VFAL*D 205
                   + P+           R  G + + A    R+ +    +A   P          
Sbjct: 328  -------KCPKP----------RRAGPRFIQA----RVNHASAEEAQAAP---------- 356

Query: 204  EQDGVEGTLHILSTTARVLFDTGAARSFIPH*FAHRLSLNV*LLVEPIRVYPP 46
              + V GT  + S  A +LFD+GA  SFI   F     L    L  P+RV+ P
Sbjct: 357  --EVVLGTFPVNSIPATILFDSGATHSFISKKFVGMHGLRKEELSTPMRVHTP 407


>emb|CAH66283.1| OSIGBa0116O04.5 [Oryza sativa Indica Group]
          Length = 1477

 Score = 79.7 bits (195), Expect = 2e-12
 Identities = 101/367 (27%), Positives = 149/367 (40%), Gaps = 19/367 (5%)
 Frame = -1

Query: 1089 PREFLGTKGAVAAQIWIQEVKRHLEILGCTPTEEICLTRY*LIGDARLWWDTCIHHYGQE 910
            P  F  T   V A  W+  V++ L+++ CT  E++    + L G A  WWD    H+ Q 
Sbjct: 281  PPTFSSTTNPVEAGDWLHAVEKKLDLIQCTEQEKVSFASHQLHGPAAEWWD----HFRQG 336

Query: 909  RL--DALT*YEFCQMFER*FISTFEKAKLKEQYKSLVQGQMIVEEYYRRFDHL*FYTYSE 736
            R   + +T  EF   F++  I T   A  K ++++L QG   V EY   F+ L  Y   +
Sbjct: 337  RAGGEPITWQEFIAAFKKTHIPTGVVALKKREFRALNQGSRSVTEYLHDFNRLARYAPED 396

Query: 735  --TEADRVAIFKKGFILSIQHKVGYLQFDSVLDAVICAFDAESVNTRLC*DGDFKKRKFG 562
              T+ +R   F +G    + + +   +F      V  A   E    R+    + KKR+  
Sbjct: 397  VRTDEERQEKFLEGLNDELSYTLMSTEFRDFQQLVDKAIRQEDKYNRM----EQKKRR-- 450

Query: 561  QSSQFGSRPGS*TSPGTNCPL*TNDKTGDSNNQGKRKYTRGFRGIYFNCNRNGHKFEDYR 382
             ++QF ++ GS   P     L T  +       G     R  R  Y   N  G++  D R
Sbjct: 451  -AAQFKAQQGSNQRP----RLVTGPQVPSYPQGGSSSVVRPQRQFY--NNNTGNRGNDNR 503

Query: 381  FPGGGAQVPRTQNQVV------*PV---NNRAPGQQLVNAL*NQRLVNQHTHDANRQPLG 229
                      TQNQ V       PV   N   PG         +R+ N    + +  P  
Sbjct: 504  NVVVRPAATSTQNQPVRKEQGSKPVICFNCGDPGHYADKCPKPRRVKNASAPNNSNVPAP 563

Query: 228  ----N*VFAL*DEQ--DGVEGTLHILSTTARVLFDTGAARSFIPH*FAHRLSLNV*LLVE 67
                N V A   +   D V GT  + S  A VLFD+GA  SF+   FA +  + V  L  
Sbjct: 564  KARVNHVAAAEAQNAPDVVLGTFPVNSIPATVLFDSGATHSFLSKSFASKHGMEVVSLGR 623

Query: 66   PIRVYPP 46
            P+ V  P
Sbjct: 624  PLLVNTP 630


>gb|AAV31373.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 2408

 Score = 79.7 bits (195), Expect = 2e-12
 Identities = 100/384 (26%), Positives = 148/384 (38%), Gaps = 36/384 (9%)
 Frame = -1

Query: 1089 PREFLGTKGAVAAQIWIQEVKRHLEILGCTPTEEICLTRY*LIGDARLWWDTCIHHYGQE 910
            P  F  T   V A  W+  V++ L+++ CT  E++    + L G A  WWD    H+ Q 
Sbjct: 71   PPTFSSTTNPVEAGDWLHAVEKKLDLIQCTEQEKVSFASHQLHGPAAEWWD----HFRQG 126

Query: 909  RLDA--LT*YEFCQMFER*FISTFEKAKLKEQYKSLVQGQMIVEEYYRRFDHL*FYTYSE 736
            R +   +T  EF   F++  I T   A  K ++++L QG   V EY   F+ L  Y   +
Sbjct: 127  RAEGEPITWQEFTAAFKKTHIPTGVVALKKREFRALNQGSRSVTEYLHDFNRLAHYAPED 186

Query: 735  --TEADRVAIFKKGFILSIQHKVGYLQFDSVLDAVICAFDAESVNTRLC*DGDFKKRKFG 562
              T+ +R   F +G    + + +    F      V  A   E    R+    + KKR+  
Sbjct: 187  VRTDEERQEKFLEGLNDELSYALMSTDFRDFQQLVDKAIRQEDKYNRM----EQKKRRAA 242

Query: 561  Q-SSQFGS--RPGS*TSP--------GTNCPL*T-----NDKTGD--------------- 475
            Q  +Q GS  RP   T P        G++  +       N+ TG+               
Sbjct: 243  QFKAQQGSNQRPRLITGPQDPSYPQGGSSSVVRPQRQFYNNNTGNRGNDNRNMVARPAAT 302

Query: 474  -SNNQGKRKYTRGFRGIYFNCNRNGHKFEDYRFPGGGAQVPRTQNQVV*PVNNRAPGQQL 298
             + NQ  RK      G+ FNC   GH  +           PR       P N+ AP  + 
Sbjct: 303  PAQNQPVRKEQGSKPGVCFNCGDPGHYADK-------CPKPRRVKNAPAPNNSNAPAPK- 354

Query: 297  VNAL*NQRLVNQHTHDANRQPLGN*VFAL*DEQDGVEGTLHILSTTARVLFDTGAARSFI 118
                   R+ +    +A   P            D V GT  + S  A VLFD+GA  SF+
Sbjct: 355  ------ARVNHVAAAEAQNAP------------DVVLGTFPVNSIPASVLFDSGATHSFL 396

Query: 117  PH*FAHRLSLNV*LLVEPIRVYPP 46
               FA    + V  L   + V  P
Sbjct: 397  SKSFASNYGMEVISLGRHLLVNTP 420


>emb|CAD41692.1| OSJNBb0015D13.7 [Oryza sativa Japonica Group]
          Length = 1516

 Score = 79.7 bits (195), Expect = 2e-12
 Identities = 96/392 (24%), Positives = 152/392 (38%), Gaps = 44/392 (11%)
 Frame = -1

Query: 1089 PREFLGTKGAVAAQIWIQEVKRHLEILGCTPTEEICLTRY*LIGDARLWWDTCIHHYGQE 910
            P  F  T   + A  W++ +++ L +L C   E++    + L G A  WWD    +Y   
Sbjct: 89   PPTFSSTTNPMEANDWLRAIEKKLNLLQCNDQEKVAFATHQLQGPASAWWD----NYVAT 144

Query: 909  RLDA--LT*YEFCQMFER*FISTFEKAKLKEQYKSLVQGQMIVEEYYRRFDHL*FYTYSE 736
            RLDA  +T  EFCQ F +  I     A+ K ++++L QG M V EY   F+ L  Y   +
Sbjct: 145  RLDATEVTWAEFCQSFRKAQIPEGIMAQQKREFRALQQGTMSVTEYLHEFNRLARYAPED 204

Query: 735  --TEADRVAIFKKGFILSIQHKV---GYLQFDSVLDAVICAFDAESVNTR---------- 601
              T+A++   F  G    + +++    Y  F+ ++D  I   +  +   R          
Sbjct: 205  VRTDAEKQEKFLFGLDDELTNQLISGVYEDFEKLVDKAIRQEEQRNKMDRKRKAAQISFP 264

Query: 600  ---------------------LC*DGDFKKRKFGQSSQFGS------RPGS*TSPGTNCP 502
                                 +C    +    F      GS      R  + T P    P
Sbjct: 265  QGNNQKPRFMTGQLGGPSTLIVCQHRPYHPSNFDNDYNGGSHNNSKQRNHNSTPPPLMAP 324

Query: 501  L*TNDKTGDSNNQGKRKYTRGFRGIYFNCNRNGHKFEDYRFPGGGAQVPRTQNQVV*PVN 322
              ++  T    ++  +K   G  G  FNC ++GH      F G   ++ RT         
Sbjct: 325  AQSDPPTVSVQSEQPKKGAVGKPGPCFNCGKHGH------FAGKCPKLNRT--------- 369

Query: 321  NRAPGQQLVNAL*NQRLVNQHTHDANRQPLGN*VFAL*DEQDGVEGTLHILSTTARVLFD 142
                G + + A    R  +    +A   P            + V GT  + S  A VLFD
Sbjct: 370  ----GPRFIQA----RANHVSAEEAQAAP------------EVVLGTFPVNSYPATVLFD 409

Query: 141  TGAARSFIPH*FAHRLSLNV*LLVEPIRVYPP 46
            +GA+ SFI   FA    L+V  L  P++V+ P
Sbjct: 410  SGASHSFISKRFAGTHGLSVVELKIPMQVHTP 441


>dbj|BAH80025.1| putative retrotransposon protein [Oryza sativa Indica Group]
          Length = 1727

 Score = 79.3 bits (194), Expect = 3e-12
 Identities = 106/382 (27%), Positives = 160/382 (41%), Gaps = 19/382 (4%)
 Frame = -1

Query: 1089 PREFLGTKGAVAAQIWIQEVKRHLEILGCTPTEEICLTRY*LIGDARLWWDTCIHHYGQE 910
            P  F  T   V A  W+  V++ L+++ CT  E++    + L G A  WWD    H+ Q 
Sbjct: 317  PPTFSSTTNPVEAGDWLHAVEKKLDLIQCTEQEKVSFASHQLHGPAAEWWD----HFRQG 372

Query: 909  RL--DALT*YEFCQMFER*FISTFEKAKLKEQYKSLVQGQMIVEEYYRRFDHL*FYTYSE 736
            R   + +T  EF   F++  I T   A  K ++++L QG   V EY   F+ L  Y   +
Sbjct: 373  RAGGEPITWQEFTAAFKKTHIPTGVVALKKREFRALSQGSRSVTEYLHDFNRLARYAPED 432

Query: 735  --TEADRVAIFKKGFILSIQHKVGYLQFDSVLDAVICAFDAESVNTRLC*DGDFKKRKFG 562
              T+ +R   F +G    + + +   +F      V  A   E    R+    + KKR+  
Sbjct: 433  VRTDEERQEKFLEGLNDELSYTLMSTEFRDFQQLVDKAIRQEDKYNRM----EQKKRR-- 486

Query: 561  QSSQFGSRPGS*TSPGTNCPL*TNDKTGDSNNQGKRKYTRGFRGIYFNCNRNGHKFEDYR 382
             ++QF ++ GS   P     L T  +       G     R  R  Y   N  G++  D R
Sbjct: 487  -AAQFKAQQGSNQRP----RLITGPQVPSYPQGGSSSVVRPQRQFY--NNNTGNRGNDNR 539

Query: 381  FPGGGAQVPRTQNQVV------*PV---NNRAPGQQLVNAL*NQRLVN----QHTHDANR 241
                      TQNQ V       PV   N   PG         +R+ N     +++ +  
Sbjct: 540  NVVARPAATSTQNQSVRKDQGSKPVICFNCGDPGHYADKCPKPRRVKNAPVPNNSNASAP 599

Query: 240  QPLGN*VFAL*DEQ--DGVEGTLHILSTTARVLFDTGAARSFIPH*FAHRLSLNV*LLVE 67
            +   N V A   +   D V GT  + S  A VLFD+GA  SF+   FA +  + V  L  
Sbjct: 600  KARVNHVAAAEAQNAPDVVLGTFPVNSIPATVLFDSGATHSFLSKSFATKHGMEVVSLGR 659

Query: 66   PIRVYPPLGAQLTLYSRYVECP 1
            P+ V  P G Q++  +RY  CP
Sbjct: 660  PLLVNTP-GNQVS-STRY--CP 677


>gb|ABB46921.2| retrotransposon protein, putative, Ty3-gypsy subclass, expressed
            [Oryza sativa Japonica Group]
          Length = 1068

 Score = 79.0 bits (193), Expect = 4e-12
 Identities = 105/414 (25%), Positives = 158/414 (38%), Gaps = 36/414 (8%)
 Frame = -1

Query: 1179 DDMENRSATTTIEKEQNSLLALSIRIVSLCPREFLGTKGAVAAQIWIQEVKRHLEILGCT 1000
            +D E R   T  E+E +SL + + R  +  P         V A  W+  V++ L+++ CT
Sbjct: 277  EDPEEREPATP-EEEDSSLRSDARRNYTTNP---------VEAGDWLHAVEKKLDLIQCT 326

Query: 999  PTEEICLTRY*LIGDARLWWDTCIHHYGQERL--DALT*YEFCQMFER*FISTFEKAKLK 826
              E++    + L G A  WWD    H+ Q R   + +T  EF   F++  I T   A  K
Sbjct: 327  EQEKVSFASHQLHGPAAEWWD----HFRQGRAGGEPITWQEFTAAFKKTHIPTGVVALKK 382

Query: 825  EQYKSLVQGQMIVEEYYRRFDHL*FYTYSE--TEADRVAIFKKGFILSIQHKVGYLQFDS 652
             ++++L QG   V EY   F+ L  Y   +  T+ +R   F +G    + + +   +F  
Sbjct: 383  REFRALNQGSRSVTEYLHDFNRLARYAPEDVHTDEERQEKFLEGLNDELSYTLMSTEFRD 442

Query: 651  VLDAVICAFDAESVNTRLC*DGDFKKRKFGQ-SSQFGSRPGS*TSPGTNCPL*T------ 493
                V  A   E    R+    + KKR+  Q  +Q GS       PG   P         
Sbjct: 443  FQQLVDKAIRQEDKYNRM----EQKKRRAAQFKAQQGSNQRPRLIPGPQVPSYPQGGSSS 498

Query: 492  ---------NDKTGDSNNQGK----------------RKYTRGFRGIYFNCNRNGHKFED 388
                     N+ TG+  N+ +                RK       I FNC   GH  + 
Sbjct: 499  VVRPQRQFYNNNTGNRGNENRNVVARPAATPVQNQPVRKEQGSKPVICFNCGDPGHYADK 558

Query: 387  YRFPGGGAQVPRTQNQVV*PVNNRAPGQQLVNAL*NQRLVNQHTHDANRQPLGN*VFAL* 208
                      PR    V  P N+  P  +        R+ +    +A   P         
Sbjct: 559  -------CPKPRHVKNVPVPNNSNVPAPK-------ARVNHVAAAEAQNAP--------- 595

Query: 207  DEQDGVEGTLHILSTTARVLFDTGAARSFIPH*FAHRLSLNV*LLVEPIRVYPP 46
               D V GT  + S  A VLFD+GA  SF+   FA +  + V  L  P+ V  P
Sbjct: 596  ---DVVLGTFPVNSIPATVLFDSGATHSFLSKSFATKHGMEVVSLGRPLLVNTP 646


>emb|CAE04985.3| OSJNBa0057M08.11 [Oryza sativa Japonica Group]
          Length = 1664

 Score = 79.0 bits (193), Expect = 4e-12
 Identities = 99/389 (25%), Positives = 153/389 (39%), Gaps = 10/389 (2%)
 Frame = -1

Query: 1164 RSATTTIEKEQNSLLALSIRIVSLCPREFLGTKGAVAAQIWIQEVKRHLEILGCTPTEEI 985
            + AT       N+ LA  +R+    P  F  T   V A  W+  +++ L++L CT  E++
Sbjct: 567  KEATPADPPVVNNKLAEFLRVR---PPVFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKV 623

Query: 984  CLTRY*LIGDARLWWDTCIHHYGQERL--DALT*YEFCQMFER*FISTFEKAKLKEQYKS 811
                + L G A  WWD    H+   R   + ++  EF   F +  I +   +  K++++S
Sbjct: 624  SFASHQLHGPASEWWD----HFRLNRTTPEPISWLEFNAAFRKTHIPSGVVSLKKKEFRS 679

Query: 810  LVQGQMIVEEYYRRFDHL*FYTYSE--TEADRVAIFKKGFILSIQHKV---GYLQFDSVL 646
            L QG   V EY   F+ L  Y   E  T+ +R   F KG    + + +    Y  F  ++
Sbjct: 680  LTQGSRTVTEYLHEFNRLARYAPEEVRTDEERQERFLKGLNDELSYPLMTGDYHDFQKLV 739

Query: 645  DAVICAFDAESVNTRLC*DGDFKKRKFG--QSSQFGSRPGS*TSPGTNCPL*TNDKTGDS 472
            D  I     E    R+    + KKR+    ++ Q  S+    T    + P          
Sbjct: 740  DKAI---RQEDKYNRM----EQKKRRIAHFKAQQGNSQRPRLTLGPQSMPQGAPRPVASP 792

Query: 471  NNQGKRKYTRGFR-GIYFNCNRNGHKFEDYRFPGGGAQVPRTQNQVV*PVNNRAPGQQLV 295
              Q   K  +G + G+ FNC   GH  +         + P+ +   V P  N  P     
Sbjct: 793  TQQQPAKREQGSKPGVCFNCGDPGHYAD---------KCPKPRRVKVVPAQNN-PSAPAA 842

Query: 294  NAL*NQRLVNQHTHDANRQPLGN*VFAL*DEQDGVEGTLHILSTTARVLFDTGAARSFIP 115
             A  N        H A  +  G          D + GT  + S  A VLFD+GA  SF+ 
Sbjct: 843  KARVN--------HVAAAEAQG--------APDVILGTFPVNSVPATVLFDSGAMHSFLS 886

Query: 114  H*FAHRLSLNV*LLVEPIRVYPPLGAQLT 28
              FA    + V  L  P+ V  P    L+
Sbjct: 887  MSFAGNQGMEVKELRRPLMVSTPSNQALS 915


>gb|ABB47191.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1443

 Score = 78.6 bits (192), Expect = 5e-12
 Identities = 91/362 (25%), Positives = 137/362 (37%), Gaps = 7/362 (1%)
 Frame = -1

Query: 1089 PREFLGTKGAVAAQIWIQEVKRHLEILGCTPTEEICLTRY*LIGDARLWWDTCIHHYGQE 910
            P  F  T   V A  W+  +++ L++L CT  E++    + L G A  WWD    H+   
Sbjct: 68   PPIFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWD----HFRLN 123

Query: 909  RLDA--LT*YEFCQMFER*FISTFEKAKLKEQYKSLVQGQMIVEEYYRRFDHL*FYTYSE 736
            R+ A  +T  EF   F +  I +   +  K++++SL QG   V EY   F+ L  Y   +
Sbjct: 124  RITAEPITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPED 183

Query: 735  TEAD--RVAIFKKGFILSIQHKV---GYLQFDSVLDAVICAFDAESVNTRLC*DGDFKKR 571
               D  R   F +G    + + +    Y  F  ++D  I     E    R+    + KKR
Sbjct: 184  VRNDEERQEKFLEGLNDELSYPLMTGDYPDFQKLVDKAI---RQEDKYNRM----EQKKR 236

Query: 570  KFGQSSQFGSRPGS*TSPGTNCPL*TNDKTGDSNNQGKRKYTRGFRGIYFNCNRNGHKFE 391
            +    + F ++ GS   P       +      +  Q  ++       + FNC   GH  +
Sbjct: 237  RI---AHFKAQQGSNQKPRLTLGPQSVPHGAPTQQQPAKREQGSKPVVCFNCGDPGHYAD 293

Query: 390  DYRFPGGGAQVPRTQNQVV*PVNNRAPGQQLVNAL*NQRLVNQHTHDANRQPLGN*VFAL 211
                P     VP   N  V     R                  H   A  Q         
Sbjct: 294  KCPKPRRVKVVPAQNNSTVPASKARV----------------NHVAAAEAQ--------- 328

Query: 210  *DEQDGVEGTLHILSTTARVLFDTGAARSFIPH*FAHRLSLNV*LLVEPIRVYPPLGAQL 31
             D  D + GT  + S  A VLFD+GA  SF+   FA    + V  L  P+ V  P    L
Sbjct: 329  -DAPDVILGTFPVNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSDQAL 387

Query: 30   TL 25
            +L
Sbjct: 388  SL 389


>gb|AAX95143.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
            Japonica Group] gi|77549637|gb|ABA92434.1|
            retrotransposon protein, putative, Ty3-gypsy subclass
            [Oryza sativa Japonica Group]
          Length = 1847

 Score = 78.2 bits (191), Expect = 7e-12
 Identities = 96/386 (24%), Positives = 148/386 (38%), Gaps = 27/386 (6%)
 Frame = -1

Query: 1101 VSLCPREFLGTKGAVAAQIWIQEVKRHLEILGCTPTEEICLTRY*LIGDARLWWDTCIHH 922
            +S+ P  F  T   V A  W+  +++ L++L CT  E++    + L G A  WWD    H
Sbjct: 503  LSVRPPTFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWD----H 558

Query: 921  YGQERLDA--LT*YEFCQMFER*FISTFEKAKLKEQYKSLVQGQMIVEEYYRRFDHL*FY 748
            +   R  A  +T  EF   F +  I +   +  K++++SL QG   V EY   F+ L  Y
Sbjct: 559  FRLNRTTAEPITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRFVTEYLHEFNRLARY 618

Query: 747  TYSE--TEADRVAIFKKGFILSIQHKV---GYLQFDSVLDAVICAFD----AESVNTRL- 598
               +  T+ +R   F +G    + + +    Y  F  ++D  I   D     E    R+ 
Sbjct: 619  APEDVRTDEERQERFLEGLNDELSYPLMTGDYHDFQKLVDKAIRQEDKYNRMEQKKRRIA 678

Query: 597  ---C*DGDFKKRKFGQSSQFGSRPGS*TSPGTNCPL*TNDKTGDSNNQGKR--------- 454
                  G+ ++ +     Q   R GS +          N+   +S NQ  R         
Sbjct: 679  HFKAQQGNSQRPRLTLGPQSMPRGGSSSVVRPQRQFFNNNAGNNSRNQAPRPVAAPTQQQ 738

Query: 453  --KYTRGFR-GIYFNCNRNGHKFEDYRFPGGGAQVPRTQNQVV*PVNNRAPGQQLVNAL* 283
              K  +G + G+ FNC   GH  +    P     VP   N      +  +  +  VN   
Sbjct: 739  PAKREQGSKPGVCFNCGDPGHYSDKCPKPRRVKVVPAQSN------STASASKARVN--- 789

Query: 282  NQRLVNQHTHDANRQPLGN*VFAL*DEQDGVEGTLHILSTTARVLFDTGAARSFIPH*FA 103
                   H   A  Q             D + GT  + S  A VLFD+GA  SF+   F 
Sbjct: 790  -------HVTAAEAQ----------GAPDVILGTFLVNSVPATVLFDSGATHSFLSMSFV 832

Query: 102  HRLSLNV*LLVEPIRVYPPLGAQLTL 25
                + V  L  P+ V  P    L+L
Sbjct: 833  GNHGMEVEDLRRPLMVSTPSNQALSL 858