BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia22_contig00031365
         (534 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004304542.1| PREDICTED: uncharacterized mitochondrial pro...   131   9e-29
emb|CAN73071.1| hypothetical protein VITISV_032383 [Vitis vinifera]   128   7e-28
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc...   126   3e-27
gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-...   126   3e-27
gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subc...   125   5e-27
gb|AAB82754.1| retrofit [Oryza longistaminata]                        125   6e-27
emb|CAN69607.1| hypothetical protein VITISV_009561 [Vitis vinifera]   125   6e-27
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop...   125   8e-27
gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subc...   125   8e-27
gb|ACY72569.1| unknown [Oryza sativa Japonica Group]                  124   1e-26
gb|ABF97142.1| retrotransposon protein, putative, Ty1-copia subc...   124   1e-26
gb|AAK53860.1|AC016781_14 Putative retroelement [Oryza sativa Ja...   124   1e-26
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p...   123   3e-26
ref|XP_002489074.1| hypothetical protein SORBIDRAFT_0139s002040 ...   122   4e-26
ref|XP_004298078.1| PREDICTED: uncharacterized mitochondrial pro...   114   5e-26
ref|XP_002460196.1| hypothetical protein SORBIDRAFT_02g024427 [S...   122   5e-26
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni...   122   5e-26
gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sat...   122   7e-26
gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]                  121   9e-26
gb|AAM18766.1|AC099325_22 putative copia-like retrotransposon Ho...   121   9e-26

>ref|XP_004304542.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
           [Fragaria vesca subsp. vesca]
          Length = 343

 Score =  131 bits (330), Expect = 9e-29
 Identities = 76/154 (49%), Positives = 95/154 (61%), Gaps = 2/154 (1%)
 Frame = +3

Query: 75  ALHSIWLSRDLIAYVVLHVAQFMSAPWSEHLVAAKRILWYLKSSLGFGIQLHRSSQPTAI 254
           +L  + ++R  IA+ V  V+QFMS P   H +A KRIL Y+K SL  G+          +
Sbjct: 122 SLQYLTITRPDIAFAVNTVSQFMSQPRVPHFIAVKRILRYIKGSLSHGLLFTPQQGTACL 181

Query: 255 WTYADADLAGCLDSCRSISGFYVFPGFNIIYYSAKKQPTIFRSSDEVEYRSLAHVCAETM 434
             Y+DAD AGC DS RS SG+ V+ G N+I + +KKQPTI RSS E EYRSLAH  AET 
Sbjct: 182 SAYSDADWAGCPDSRRSTSGYLVYLGSNLISWCSKKQPTIARSSAESEYRSLAHASAETT 241

Query: 435 *VSYLL--ATICSSSPITLLCDNLGATYMASNPV 530
            + YLL    +     + L CDNL ATYMASNPV
Sbjct: 242 WLGYLLYELGVRIQYLVQLHCDNLSATYMASNPV 275


>emb|CAN73071.1| hypothetical protein VITISV_032383 [Vitis vinifera]
          Length = 1239

 Score =  128 bits (322), Expect = 7e-28
 Identities = 70/154 (45%), Positives = 102/154 (66%), Gaps = 2/154 (1%)
 Frame = +3

Query: 75   ALHSIWLSRDLIAYVVLHVAQFMSAPWSEHLVAAKRILWYLKSSLGFGIQLHRSSQPTAI 254
            AL  + ++R  IA+ V  V+QF+ AP  +H +A KRIL Y+K +L FG+    S+ P+A+
Sbjct: 1000 ALQYLTITRPDIAHAVNSVSQFLHAPTIDHFLAVKRILRYVKGTLHFGLTFRPSTIPSAL 1059

Query: 255  WTYADADLAGCLDSCRSISGFYVFPGFNIIYYSAKKQPTIFRSSDEVEYRSLAHVCAETM 434
              Y+DAD AGC D+ RS SG+ ++ G N++ +SAKKQPT+ RSS E EYR+LA   AE +
Sbjct: 1060 VAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALAMTAAELL 1119

Query: 435  *VSYLLATICSSSPI--TLLCDNLGATYMASNPV 530
             +++LL  +    P    LLCDN  A +++SNPV
Sbjct: 1120 WLTHLLHDLKVPIPXQPLLLCDNKSAIFLSSNPV 1153


>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1460

 Score =  126 bits (317), Expect = 3e-27
 Identities = 70/154 (45%), Positives = 99/154 (64%), Gaps = 2/154 (1%)
 Frame = +3

Query: 75   ALHSIWLSRDLIAYVVLHVAQFMSAPWSEHLVAAKRILWYLKSSLGFGIQLHRSSQPTAI 254
            AL  + L+R  IA+ V  V QF+ AP + H +A KRIL YLK     G+++H+S   T +
Sbjct: 1241 ALQYLTLTRPDIAFSVNKVCQFLHAPTTVHWIAVKRILRYLKQCTRLGLEIHKSGS-TLV 1299

Query: 255  WTYADADLAGCLDSCRSISGFYVFPGFNIIYYSAKKQPTIFRSSDEVEYRSLAHVCAETM 434
              ++DAD AGCLD  RS  GF +F G N++ ++A+KQ T+ RSS E EY+++A+  AE M
Sbjct: 1300 SGFSDADWAGCLDDRRSTGGFAIFLGSNLVSWNARKQATVSRSSTESEYKAIANATAEIM 1359

Query: 435  *VSYLLATICSSSP--ITLLCDNLGATYMASNPV 530
             V  LLA +   SP    + CDNLGA Y+++NPV
Sbjct: 1360 WVQTLLAELEIKSPKAAKIWCDNLGAKYLSANPV 1393


>gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  126 bits (317), Expect = 3e-27
 Identities = 70/154 (45%), Positives = 99/154 (64%), Gaps = 2/154 (1%)
 Frame = +3

Query: 75   ALHSIWLSRDLIAYVVLHVAQFMSAPWSEHLVAAKRILWYLKSSLGFGIQLHRSSQPTAI 254
            AL  + L+R  IA+ V  V QF+ AP + H +A KRIL YLK     G+++H+S   T +
Sbjct: 963  ALQYLTLTRPDIAFSVNKVCQFLHAPTTVHWIAVKRILRYLKQCTRLGLEIHKSGS-TLV 1021

Query: 255  WTYADADLAGCLDSCRSISGFYVFPGFNIIYYSAKKQPTIFRSSDEVEYRSLAHVCAETM 434
              ++DAD AGCLD  RS  GF +F G N++ ++A+KQ T+ RSS E EY+++A+  AE M
Sbjct: 1022 SGFSDADWAGCLDDRRSTGGFAIFLGSNLVSWNARKQATVSRSSTESEYKAIANATAEIM 1081

Query: 435  *VSYLLATICSSSP--ITLLCDNLGATYMASNPV 530
             V  LLA +   SP    + CDNLGA Y+++NPV
Sbjct: 1082 WVQTLLAELEIKSPKAAKIWCDNLGAKYLSANPV 1115


>gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1478

 Score =  125 bits (315), Expect = 5e-27
 Identities = 70/154 (45%), Positives = 99/154 (64%), Gaps = 2/154 (1%)
 Frame = +3

Query: 75   ALHSIWLSRDLIAYVVLHVAQFMSAPWSEHLVAAKRILWYLKSSLGFGIQLHRSSQPTAI 254
            AL  + L+R  IA+ V  V QF+ AP + H +A KRIL YLK     G+++H+S   T +
Sbjct: 1234 ALQYLTLTRPDIAFSVNKVCQFLHAPTTVHWIAVKRILRYLKQCTRLGLEIHKSGS-TLV 1292

Query: 255  WTYADADLAGCLDSCRSISGFYVFPGFNIIYYSAKKQPTIFRSSDEVEYRSLAHVCAETM 434
              ++DAD AGCLD  RS  GF +F G N++ ++A+KQ T+ RSS E EY+++A+  AE M
Sbjct: 1293 SGFSDADWAGCLDDRRSTGGFAIFLGSNLVSWNARKQATVSRSSIESEYKAIANATAEIM 1352

Query: 435  *VSYLLATICSSSP--ITLLCDNLGATYMASNPV 530
             V  LLA +   SP    + CDNLGA Y+++NPV
Sbjct: 1353 WVQTLLAELEIKSPKAAKIWCDNLGAKYLSANPV 1386


>gb|AAB82754.1| retrofit [Oryza longistaminata]
          Length = 1445

 Score =  125 bits (314), Expect = 6e-27
 Identities = 69/154 (44%), Positives = 97/154 (62%), Gaps = 2/154 (1%)
 Frame = +3

Query: 75   ALHSIWLSRDLIAYVVLHVAQFMSAPWSEHLVAAKRILWYLKSSLGFGIQLHRSSQPTAI 254
            AL  + L+R  IAY V  V QF+ AP + H +A KRIL YL      G+ +H+S+  T +
Sbjct: 1233 ALQYLTLTRPDIAYSVNKVCQFLHAPTTSHWIAVKRILRYLNQCTSLGLHIHKSAS-TLV 1291

Query: 255  WTYADADLAGCLDSCRSISGFYVFPGFNIIYYSAKKQPTIFRSSDEVEYRSLAHVCAETM 434
              Y+DAD AG +D  +S  GF VF G N++ +SA+KQPT+ RSS E EY+++A+  AE +
Sbjct: 1292 HGYSDADWAGSIDDRKSTGGFAVFLGSNLVSWSARKQPTVSRSSTEAEYKAVANTTAELI 1351

Query: 435  *VSYLLATICSSSP--ITLLCDNLGATYMASNPV 530
             V  LL  +   SP    + CDNLGA Y+++NPV
Sbjct: 1352 WVQTLLKELGIESPKAAKIWCDNLGAKYLSANPV 1385


>emb|CAN69607.1| hypothetical protein VITISV_009561 [Vitis vinifera]
          Length = 1207

 Score =  125 bits (314), Expect = 6e-27
 Identities = 68/143 (47%), Positives = 97/143 (67%), Gaps = 2/143 (1%)
 Frame = +3

Query: 108  IAYVVLHVAQFMSAPWSEHLVAAKRILWYLKSSLGFGIQLHRSSQPTAIWTYADADLAGC 287
            IA+ V  V+QF+ AP  +H +A KRIL Y+K +L FG+    S+ P+A+  Y+DAD AGC
Sbjct: 1032 IAHAVNSVSQFLHAPTIDHFLAVKRILRYVKGTLHFGLTFCPSTIPSALVAYSDADWAGC 1091

Query: 288  LDSCRSISGFYVFPGFNIIYYSAKKQPTIFRSSDEVEYRSLAHVCAETM*VSYLLATICS 467
             D+ RS SG+ ++ G N++ +SAKKQPT+ RSS E EYR+LA   AE + +++LL  +  
Sbjct: 1092 PDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALAMTAAELLWLTHLLHDLNV 1151

Query: 468  SSP--ITLLCDNLGATYMASNPV 530
              P    LLCDN GA +++SNPV
Sbjct: 1152 PIPQQPLLLCDNKGAIFLSSNPV 1174


>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea mays]
          Length = 1313

 Score =  125 bits (313), Expect = 8e-27
 Identities = 70/154 (45%), Positives = 96/154 (62%), Gaps = 2/154 (1%)
 Frame = +3

Query: 75   ALHSIWLSRDLIAYVVLHVAQFMSAPWSEHLVAAKRILWYLKSSLGFGIQLHRSSQPTAI 254
            AL  + L+R  IA+ V  V QF+ AP + H  A KRIL Y+K     G+ +HRS   T +
Sbjct: 1101 ALQYLTLTRPDIAFSVNKVCQFLHAPTTLHWAAVKRILRYIKQCTNLGLHIHRSDS-TLV 1159

Query: 255  WTYADADLAGCLDSCRSISGFYVFPGFNIIYYSAKKQPTIFRSSDEVEYRSLAHVCAETM 434
              ++DAD AG +D  +S  GF VF G N++ +SA+KQPT+ RSS E EY++LA+  AE +
Sbjct: 1160 SAFSDADWAGSVDDRKSTGGFAVFLGSNLVSWSARKQPTVSRSSTESEYKALANATAELI 1219

Query: 435  *VSYLLATICSSSP--ITLLCDNLGATYMASNPV 530
             V  LL  I   SP    L CDNLGA Y+++NP+
Sbjct: 1220 WVQILLTEISIKSPRAAKLWCDNLGAKYLSANPI 1253


>gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2074

 Score =  125 bits (313), Expect = 8e-27
 Identities = 71/154 (46%), Positives = 100/154 (64%), Gaps = 2/154 (1%)
 Frame = +3

Query: 75   ALHSIWLSRDLIAYVVLHVAQFMSAPWSEHLVAAKRILWYLKSSLGFGIQLHRSSQPTAI 254
            AL  + L+R  I++ V  V QF+ +P  +H +A KRIL Y+K S+  G+++ RSS  T +
Sbjct: 1862 ALQYLTLTRPDISFAVNKVCQFLHSPTIDHWMAVKRILRYVKFSVDLGLKISRSSS-TLV 1920

Query: 255  WTYADADLAGCLDSCRSISGFYVFPGFNIIYYSAKKQPTIFRSSDEVEYRSLAHVCAETM 434
              + DAD AG +D  RS  GF VF G N++ +SA+KQ T+ RSS E EY+++A+  AE M
Sbjct: 1921 SAFLDADWAGSIDDRRSTGGFAVFLGSNLVSWSARKQATVSRSSTEAEYKAVANATAEVM 1980

Query: 435  *VSYLLATICSSSPIT--LLCDNLGATYMASNPV 530
             V  LL  +  +SP T  + CDNLGATY+A NPV
Sbjct: 1981 WVQALLKELGINSPETACMWCDNLGATYLAVNPV 2014


>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
          Length = 1436

 Score =  124 bits (312), Expect = 1e-26
 Identities = 69/154 (44%), Positives = 97/154 (62%), Gaps = 2/154 (1%)
 Frame = +3

Query: 75   ALHSIWLSRDLIAYVVLHVAQFMSAPWSEHLVAAKRILWYLKSSLGFGIQLHRSSQPTAI 254
            AL  + L+R  IAY V  V QF+ AP ++H  A KRIL YL      G+ +H+S+  T +
Sbjct: 1224 ALQYLTLTRPDIAYSVNKVCQFLHAPTTDHWTAVKRILRYLNQCTSLGLNIHKSAS-TLV 1282

Query: 255  WTYADADLAGCLDSCRSISGFYVFPGFNIIYYSAKKQPTIFRSSDEVEYRSLAHVCAETM 434
              Y+DAD AG +D  +S  GF VF G N++ +SA+KQPT+ RSS E EY+++A+  AE +
Sbjct: 1283 HGYSDADWAGSVDDRKSTGGFAVFLGSNLVSWSARKQPTVSRSSTEAEYKAVANTTAELI 1342

Query: 435  *VSYLLATICSSSP--ITLLCDNLGATYMASNPV 530
             V  LL  +   SP    + CDNLGA Y+++NPV
Sbjct: 1343 WVQTLLRELGIDSPKAAKIWCDNLGAKYLSANPV 1376


>gb|ABF97142.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 658

 Score =  124 bits (311), Expect = 1e-26
 Identities = 69/154 (44%), Positives = 100/154 (64%), Gaps = 2/154 (1%)
 Frame = +3

Query: 75  ALHSIWLSRDLIAYVVLHVAQFMSAPWSEHLVAAKRILWYLKSSLGFGIQLHRSSQPTAI 254
           ALH + L+R  +++ V  V Q++ AP +EH  AAKRIL YLK ++  G+++ +S+    +
Sbjct: 106 ALHYLTLTRPDLSFSVNKVCQYLHAPTTEHWAAAKRILRYLKHTVKLGLKIGKSNS-LLV 164

Query: 255 WTYADADLAGCLDSCRSISGFYVFPGFNIIYYSAKKQPTIFRSSDEVEYRSLAHVCAETM 434
             ++DAD AGCLD  RS  GF VF G N++ +SA+KQ T+ RSS E EY++L +  AE M
Sbjct: 165 SAFSDADWAGCLDDRRSTGGFAVFIGPNLVSWSARKQATVSRSSTEAEYKALENATAEIM 224

Query: 435 *VSYLLATICSSSPIT--LLCDNLGATYMASNPV 530
            +  LL  +    P T  + CDN+GATYM +NPV
Sbjct: 225 WIQTLLHELGIQVPKTAKVWCDNIGATYMIANPV 258


>gb|AAK53860.1|AC016781_14 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1096

 Score =  124 bits (311), Expect = 1e-26
 Identities = 69/154 (44%), Positives = 100/154 (64%), Gaps = 2/154 (1%)
 Frame = +3

Query: 75   ALHSIWLSRDLIAYVVLHVAQFMSAPWSEHLVAAKRILWYLKSSLGFGIQLHRSSQPTAI 254
            ALH + L+R  +++ V  V Q++ AP +EH  AAKRIL YLK ++  G+++ +S+    +
Sbjct: 885  ALHYLTLTRPDLSFSVNKVCQYLHAPTTEHWAAAKRILRYLKHTVKLGLKIGKSNS-LLV 943

Query: 255  WTYADADLAGCLDSCRSISGFYVFPGFNIIYYSAKKQPTIFRSSDEVEYRSLAHVCAETM 434
              ++DAD AGCLD  RS  GF VF G N++ +SA+KQ T+ RSS E EY++L +  AE M
Sbjct: 944  SAFSDADWAGCLDDRRSTGGFAVFIGPNLVSWSARKQATVSRSSTEAEYKALENATAEIM 1003

Query: 435  *VSYLLATICSSSPIT--LLCDNLGATYMASNPV 530
             +  LL  +    P T  + CDN+GATYM +NPV
Sbjct: 1004 WIQTLLHELGIQVPKTAKVWCDNIGATYMIANPV 1037


>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
            sativa Japonica Group]
          Length = 1448

 Score =  123 bits (308), Expect = 3e-26
 Identities = 68/154 (44%), Positives = 97/154 (62%), Gaps = 2/154 (1%)
 Frame = +3

Query: 75   ALHSIWLSRDLIAYVVLHVAQFMSAPWSEHLVAAKRILWYLKSSLGFGIQLHRSSQPTAI 254
            AL  + L+R  IAY V  V QF+ AP + H +A KRIL YL      G+ +H+S+  T +
Sbjct: 1236 ALQYLTLTRPDIAYSVNKVCQFLHAPTTSHWIAVKRILRYLNQCTSLGLHVHKSAS-TLV 1294

Query: 255  WTYADADLAGCLDSCRSISGFYVFPGFNIIYYSAKKQPTIFRSSDEVEYRSLAHVCAETM 434
              Y+DAD AG +D  +S  GF VF G N++ +SA+KQPT+ RSS E EY+++A+  AE +
Sbjct: 1295 HGYSDADGAGSIDDRKSTGGFAVFLGSNLVSWSARKQPTVSRSSTEAEYKAVANTTAELI 1354

Query: 435  *VSYLLATICSSSP--ITLLCDNLGATYMASNPV 530
             V  +L  +   SP    + CDNLGA Y+++NPV
Sbjct: 1355 WVQTVLKELGIESPKAAKIWCDNLGAKYLSANPV 1388


>ref|XP_002489074.1| hypothetical protein SORBIDRAFT_0139s002040 [Sorghum bicolor]
            gi|241947124|gb|EES20269.1| hypothetical protein
            SORBIDRAFT_0139s002040 [Sorghum bicolor]
          Length = 1822

 Score =  122 bits (307), Expect = 4e-26
 Identities = 68/154 (44%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
 Frame = +3

Query: 75   ALHSIWLSRDLIAYVVLHVAQFMSAPWSEHLVAAKRILWYLKSSLGFGIQLHRSSQPTAI 254
            AL  +  +R  I Y V  +   M  P   HL A KRIL YL+ S+ FG+ LHR S  T +
Sbjct: 1609 ALQYLTFTRPDITYAVQQICLHMHDPREPHLTALKRILRYLRGSVDFGLLLHRRSSSTEL 1668

Query: 255  WTYADADLAGCLDSCRSISGFYVFPGFNIIYYSAKKQPTIFRSSDEVEYRSLAHVCAETM 434
              Y DAD AGC D+ RS SG+ VF G N++ +S+K+QP + RSS E EYR++A+  AE  
Sbjct: 1669 VVYTDADWAGCPDTRRSTSGYAVFLGGNLVSWSSKRQPVVSRSSAEAEYRAVANGVAEAS 1728

Query: 435  *VSYLLATICS--SSPITLLCDNLGATYMASNPV 530
             +  LLA + S  S    + CDN+ A Y+++NPV
Sbjct: 1729 WLRQLLAELHSPLSQSALVYCDNVSAVYLSTNPV 1762


>ref|XP_004298078.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
           [Fragaria vesca subsp. vesca]
          Length = 175

 Score =  114 bits (286), Expect(2) = 5e-26
 Identities = 66/145 (45%), Positives = 89/145 (61%)
 Frame = +3

Query: 75  ALHSIWLSRDLIAYVVLHVAQFMSAPWSEHLVAAKRILWYLKSSLGFGIQLHRSSQPTAI 254
           +L  + ++R  I++VV  VAQFMS P + HL+A K IL ++K +L   +  H    P  +
Sbjct: 31  SLQYLTITRLDISFVVNFVAQFMSQPRTTHLMAVKCILRFVKGTLDHELSFHPQHHPVTL 90

Query: 255 WTYADADLAGCLDSCRSISGFYVFPGFNIIYYSAKKQPTIFRSSDEVEYRSLAHVCAETM 434
            +Y DAD AG  DS  S SG+ V+   N+I + +KKQPT+ RSS E EYRSLAH  AET 
Sbjct: 91  SSYFDADWAGYPDSRISTSGYLVYLSLNLISWCSKKQPTVARSSAEAEYRSLAHASAETT 150

Query: 435 *VSYLLATICSSSPITLLCDNLGAT 509
            + YLL  +  + PI L  DNL AT
Sbjct: 151 WLGYLLLGVQIALPIMLHYDNLSAT 175



 Score = 28.9 bits (63), Expect(2) = 5e-26
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +2

Query: 2   VAKSQLPSCSGNALFDLVEYCQLVGSPQYLAFT 100
           VAK  L +  GN   +L+ + ++VGS QYL  T
Sbjct: 6   VAKPPLTASDGNPFDNLIIFREMVGSLQYLTIT 38


>ref|XP_002460196.1| hypothetical protein SORBIDRAFT_02g024427 [Sorghum bicolor]
            gi|241923573|gb|EER96717.1| hypothetical protein
            SORBIDRAFT_02g024427 [Sorghum bicolor]
          Length = 1575

 Score =  122 bits (306), Expect = 5e-26
 Identities = 68/154 (44%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
 Frame = +3

Query: 75   ALHSIWLSRDLIAYVVLHVAQFMSAPWSEHLVAAKRILWYLKSSLGFGIQLHRSSQPTAI 254
            AL  +  +R  I Y V  +   M  P   HL A KRIL YL+ S+ FG+ LHR S  T +
Sbjct: 1362 ALQYLTFTRPDITYAVQQICLHMHDPREPHLTALKRILRYLRGSVDFGLLLHRRSSSTEL 1421

Query: 255  WTYADADLAGCLDSCRSISGFYVFPGFNIIYYSAKKQPTIFRSSDEVEYRSLAHVCAETM 434
              Y DAD AGC D+ RS SG+ VF G N++ +S+K+QP + RSS E EYR++A+  AE  
Sbjct: 1422 VVYTDADWAGCPDTRRSTSGYAVFLGGNLVSWSSKRQPVVSRSSAEAEYRAVANGVAEAS 1481

Query: 435  *VSYLLATICS--SSPITLLCDNLGATYMASNPV 530
             +  LLA + S  S    + CDN+ A Y+++NPV
Sbjct: 1482 WLRQLLAELHSPLSRSALVYCDNVSAVYLSTNPV 1515


>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|108706314|gb|ABF94109.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1247

 Score =  122 bits (306), Expect = 5e-26
 Identities = 73/154 (47%), Positives = 96/154 (62%), Gaps = 2/154 (1%)
 Frame = +3

Query: 75   ALHSIWLSRDLIAYVVLHVAQFMSAPWSEHLVAAKRILWYLKSSLGFGIQLHRSSQPTAI 254
            AL  + L+R  IA+ V  V QF+ AP + H  A KRIL YLK     G++L +S +   +
Sbjct: 1035 ALQYLTLTRPDIAFPVNKVCQFLHAPTTHHWAAVKRILRYLKQCTRLGLKLSKS-RSMLV 1093

Query: 255  WTYADADLAGCLDSCRSISGFYVFPGFNIIYYSAKKQPTIFRSSDEVEYRSLAHVCAETM 434
              Y+DAD AG LD  RS  GF VF G N++ +SA+KQ T+ RSS E EY++LA+  AE M
Sbjct: 1094 SAYSDADWAGSLDDRRSTGGFAVFLGDNLVSWSARKQATVSRSSTESEYKALANATAEIM 1153

Query: 435  *VSYLLATICSSSP--ITLLCDNLGATYMASNPV 530
             V  LLA +   SP    L CDNLGA Y+++NPV
Sbjct: 1154 WVQTLLAELQVESPSMAKLWCDNLGAKYLSANPV 1187


>gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sativa]
            gi|31430072|gb|AAP52036.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1058

 Score =  122 bits (305), Expect = 7e-26
 Identities = 70/154 (45%), Positives = 95/154 (61%), Gaps = 2/154 (1%)
 Frame = +3

Query: 75   ALHSIWLSRDLIAYVVLHVAQFMSAPWSEHLVAAKRILWYLKSSLGFGIQLHRSSQPTAI 254
            AL  + L+R  I++ V  V QF+  P + H    KRIL Y+K +LG G+++ +SS    +
Sbjct: 839  ALQYLTLTRPDISFSVNKVCQFLQNPTTVHWATVKRILRYVKGTLGLGLKVEKSSS-NIV 897

Query: 255  WTYADADLAGCLDSCRSISGFYVFPGFNIIYYSAKKQPTIFRSSDEVEYRSLAHVCAETM 434
              Y+DAD A CLD  RS  GF VF G N+I ++A+KQ T+ RSS E EY++LA+  AE M
Sbjct: 898  SAYSDADWADCLDDKRSTGGFAVFLGSNLISWNARKQATVSRSSTEAEYKALANATAEIM 957

Query: 435  *VSYLLAT--ICSSSPITLLCDNLGATYMASNPV 530
             V  LL    I    P  L CDN+GATY++ NPV
Sbjct: 958  WVRKLLEELGISHPGPSQLWCDNIGATYLSVNPV 991


>gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]
          Length = 1448

 Score =  121 bits (304), Expect = 9e-26
 Identities = 68/154 (44%), Positives = 97/154 (62%), Gaps = 2/154 (1%)
 Frame = +3

Query: 75   ALHSIWLSRDLIAYVVLHVAQFMSAPWSEHLVAAKRILWYLKSSLGFGIQLHRSSQPTAI 254
            AL  + L+R  IAY V  V QF+ AP + H +A KRIL YL      G+ +H+S+  T +
Sbjct: 1236 ALQYLTLTRPDIAYSVNKVCQFLHAPTTSHWIAVKRILRYLNQCTSPGLHVHKSAS-TLV 1294

Query: 255  WTYADADLAGCLDSCRSISGFYVFPGFNIIYYSAKKQPTIFRSSDEVEYRSLAHVCAETM 434
              Y+DAD AG +D  +S  GF VF G N++ +SA+KQPT+ RSS E EY+++A+  AE +
Sbjct: 1295 HGYSDADGAGSIDDRKSTGGFAVFLGSNLVSWSARKQPTVSRSSTEAEYKAVANTTAELI 1354

Query: 435  *VSYLLATICSSSP--ITLLCDNLGATYMASNPV 530
             V  +L  +   SP    + CDNLGA Y+++NPV
Sbjct: 1355 WVQTVLKELGIESPKAAKIWCDNLGAKYLSANPV 1388


>gb|AAM18766.1|AC099325_22 putative copia-like retrotransposon Hopscotch polyprotein [Oryza
            sativa Japonica Group]
          Length = 1150

 Score =  121 bits (304), Expect = 9e-26
 Identities = 67/154 (43%), Positives = 98/154 (63%), Gaps = 2/154 (1%)
 Frame = +3

Query: 75   ALHSIWLSRDLIAYVVLHVAQFMSAPWSEHLVAAKRILWYLKSSLGFGIQLHRSSQPTAI 254
            AL  + L+R  IA+ +  V QF+ +P   H  A KRI+ YL+ ++G G+++ +S Q   +
Sbjct: 852  ALQYLTLTRPDIAFSINKVCQFLHSPTLTHWSAVKRIIRYLRGTVGMGLKIQKS-QSMLV 910

Query: 255  WTYADADLAGCLDSCRSISGFYVFPGFNIIYYSAKKQPTIFRSSDEVEYRSLAHVCAETM 434
              ++DAD AGC+D  RS SGF VF G N+I +S +KQ T+ RSS E EY++LA+  AE +
Sbjct: 911  NAFSDADWAGCVDDRRSTSGFAVFLGSNLISWSVRKQATVSRSSTEAEYKALANATAEVI 970

Query: 435  *VSYLLATICSSSP--ITLLCDNLGATYMASNPV 530
             V  LL  +    P    L CDNLGATY+++NP+
Sbjct: 971  WVQTLLKELGIQCPSMARLWCDNLGATYLSANPI 1004