BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia22_contig00030382
         (423 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF81447.1| NBS type disease resistance protein [Populus tric...    58   1e-18
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A...    52   3e-15
gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157...    74   3e-14
gb|AGH20672.1| reverse transcriptase, partial [Thlaspi arvense]        67   2e-13
gb|AGH20681.1| reverse transcriptase, partial [Raphanus sativus]       66   3e-13
gb|AGH20679.1| reverse transcriptase, partial [Raphanus sativus]       65   5e-13
gb|AGH20671.1| reverse transcriptase, partial [Thlaspi arvense]        64   1e-12
gb|AGH20680.1| reverse transcriptase, partial [Raphanus sativus]       64   2e-12
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...    63   3e-12
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]          63   3e-12
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...    63   3e-12
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...    63   3e-12
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]              63   3e-12
gb|AFK88553.1| reverse transcriptase, partial [Arabidopsis halle...    66   3e-12
gb|AGH20665.1| reverse transcriptase, partial [Turritis glabra]        65   3e-12
gb|AFK88550.1| reverse transcriptase, partial [Arabidopsis halle...    65   3e-12
gb|AFK88548.1| reverse transcriptase, partial [Arabidopsis halle...    65   3e-12
gb|AFK88543.1| reverse transcriptase, partial [Arabidopsis halle...    65   3e-12
gb|AFK88542.1| reverse transcriptase, partial [Arabidopsis halle...    65   3e-12
gb|AFK88541.1| reverse transcriptase, partial [Arabidopsis halle...    65   3e-12

>gb|ABF81447.1| NBS type disease resistance protein [Populus trichocarpa]
          Length = 972

 Score = 57.8 bits (138), Expect(3) = 1e-18
 Identities = 25/43 (58%), Positives = 30/43 (69%)
 Frame = -3

Query: 421 EHALYYKKTNDGDILLLCSYVDALNFKGNNPSLFKDFKETMTH 293
           EHA+Y KK  +G IL  C YVD L F GNNP++F DFK+ M H
Sbjct: 160 EHAIYVKKGANGSILFACLYVDDLIFTGNNPTMFDDFKQNMVH 202



 Score = 44.3 bits (103), Expect(3) = 1e-18
 Identities = 23/43 (53%), Positives = 33/43 (76%), Gaps = 2/43 (4%)
 Frame = -1

Query: 297 LMSYFLGIEVKQKDQGILISQV-YVK-VLKKFNI*NCKLVSTP 175
           LMS+FLG+EV QK++GI +SQ  Y K +L++F + +C  VSTP
Sbjct: 211 LMSHFLGLEVTQKEEGIFVSQSGYAKDILERFKMESCNPVSTP 253



 Score = 36.2 bits (82), Expect(3) = 1e-18
 Identities = 17/30 (56%), Positives = 19/30 (63%)
 Frame = -2

Query: 95  SLRYLTCTRIDILHGVG*LVDIWRNPKSKH 6
           SLRYLTCTR DIL+GVG +      P   H
Sbjct: 279 SLRYLTCTRPDILYGVGLVSRYMETPDQSH 308


>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis thaliana]
          Length = 1272

 Score = 51.6 bits (122), Expect(3) = 3e-15
 Identities = 25/42 (59%), Positives = 31/42 (73%)
 Frame = -3

Query: 421  EHALYYKKTNDGDILLLCSYVDALNFKGNNPSLFKDFKETMT 296
            EHALY K   + DIL+ C YVD L F GNNPS+F++FK+ MT
Sbjct: 1013 EHALYIKIQKE-DILIACLYVDDLIFTGNNPSMFEEFKKEMT 1053



 Score = 40.8 bits (94), Expect(3) = 3e-15
 Identities = 23/34 (67%), Positives = 27/34 (79%), Gaps = 2/34 (5%)
 Frame = -1

Query: 297  LMSYFLGIEVKQKDQGILISQV-YVK-VLKKFNI 202
            LMSY+LGIEVKQ+D GI I+Q  Y K VLKKF +
Sbjct: 1063 LMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKM 1096



 Score = 34.3 bits (77), Expect(3) = 3e-15
 Identities = 16/30 (53%), Positives = 20/30 (66%)
 Frame = -2

Query: 95   SLRYLTCTRIDILHGVG*LVDIWRNPKSKH 6
            SLRYLTCTR DIL+ VG +     +P + H
Sbjct: 1106 SLRYLTCTRPDILYAVGVVSRYMEHPTTTH 1135


>gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157|gb|ACN78980.1|
            copia-type polyprotein [Glycine max]
          Length = 1042

 Score = 73.6 bits (179), Expect(2) = 3e-14
 Identities = 49/121 (40%), Positives = 70/121 (57%), Gaps = 12/121 (9%)
 Frame = -3

Query: 421  EHALYYKKTNDGDILLLCSYVDALNFKGNNPSLFKDFKETMTHV-------LLSGH*S-E 266
            E+ALY K  N+GD+L +C YVD L F GNNP+LF+DFKE+M+         L+S +   E
Sbjct: 703  EYALYVKTFNNGDVLFICLYVDDLIFTGNNPNLFEDFKESMSREFDMTDMGLMSYYLGME 762

Query: 265  AKRPRNPYFSSIRQSSQEI----QYIELQTGFYTWKCGQKLSKFDDDEERVDPTTLKSLD 98
             K+ +N  F S  + ++E+      ++        + G KLSKFD+  E+VD T  KSL 
Sbjct: 763  VKQTQNGIFVSQERYTKEVLKKFNMLDCNPVNTPMEGGLKLSKFDEG-EKVDSTIFKSLV 821

Query: 97   G 95
            G
Sbjct: 822  G 822



 Score = 30.4 bits (67), Expect(2) = 3e-14
 Identities = 16/30 (53%), Positives = 18/30 (60%)
 Frame = -2

Query: 95  SLRYLTCTRIDILHGVG*LVDIWRNPKSKH 6
           SLRYLT TR DIL+ VG +      P S H
Sbjct: 823 SLRYLTNTRPDILYAVGVVCRFMEAPTSPH 852


>gb|AGH20672.1| reverse transcriptase, partial [Thlaspi arvense]
          Length = 315

 Score = 66.6 bits (161), Expect(2) = 2e-13
 Identities = 49/121 (40%), Positives = 67/121 (55%), Gaps = 12/121 (9%)
 Frame = -3

Query: 421 EHALYYKKTNDGDILLLCSYVDALNFKGNNPSLFKDFKETMTHV-------LLSGH*S-E 266
           EHALY K T++ DIL+ C YVD L F G+NPS+F++FK+ MT         L+S +   E
Sbjct: 174 EHALYIK-THNNDILIACLYVDDLIFTGSNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIE 232

Query: 265 AKRPRNPYFSSIRQSSQEI----QYIELQTGFYTWKCGQKLSKFDDDEERVDPTTLKSLD 98
            K+  N  F S    ++E+    +  +        +CG KLSK D+ E  VDPT  KSL 
Sbjct: 233 VKQEDNGIFISQEGYAKEVLKKFKMDDSNPVCTPMECGAKLSKHDEGES-VDPTLFKSLV 291

Query: 97  G 95
           G
Sbjct: 292 G 292



 Score = 34.3 bits (77), Expect(2) = 2e-13
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = -2

Query: 95  SLRYLTCTRIDILHGVG 45
           SLRYLTCTR DILH VG
Sbjct: 293 SLRYLTCTRPDILHAVG 309


>gb|AGH20681.1| reverse transcriptase, partial [Raphanus sativus]
          Length = 315

 Score = 66.2 bits (160), Expect(2) = 3e-13
 Identities = 48/121 (39%), Positives = 66/121 (54%), Gaps = 12/121 (9%)
 Frame = -3

Query: 421 EHALYYKKTNDGDILLLCSYVDALNFKGNNPSLFKDFKETMTHV-------LLSGH*S-E 266
           EHALY K T + DIL+ C YVD L F GNNP +F+DFK+ MT         L+S H   +
Sbjct: 174 EHALYIK-TQNNDILIACLYVDDLIFTGNNPIMFEDFKKEMTKEFEMTDIGLMSYHLGIK 232

Query: 265 AKRPRNPYFSSIRQSSQEI----QYIELQTGFYTWKCGQKLSKFDDDEERVDPTTLKSLD 98
            K+  N  F +    ++E+    +  +        +CG KLSK +++ E VDPT  KSL 
Sbjct: 233 VKQEENGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGVKLSK-EEEGESVDPTLFKSLV 291

Query: 97  G 95
           G
Sbjct: 292 G 292



 Score = 34.3 bits (77), Expect(2) = 3e-13
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = -2

Query: 95  SLRYLTCTRIDILHGVG 45
           SLRYLTCTR DILH VG
Sbjct: 293 SLRYLTCTRPDILHAVG 309


>gb|AGH20679.1| reverse transcriptase, partial [Raphanus sativus]
          Length = 315

 Score = 65.5 bits (158), Expect(2) = 5e-13
 Identities = 48/121 (39%), Positives = 66/121 (54%), Gaps = 12/121 (9%)
 Frame = -3

Query: 421 EHALYYKKTNDGDILLLCSYVDALNFKGNNPSLFKDFKETMTHV-------LLSGH*S-E 266
           EHALY K T + DIL+ C YVD L F GNNP +F+DFK+ MT         L+S +   E
Sbjct: 174 EHALYIK-TQNNDILIACLYVDDLIFTGNNPIMFEDFKKEMTKEFEMTDIGLMSYYLGIE 232

Query: 265 AKRPRNPYFSSIRQSSQEI----QYIELQTGFYTWKCGQKLSKFDDDEERVDPTTLKSLD 98
            K+  N  F +    ++E+    +  +        +CG KLSK +++ E VDPT  KSL 
Sbjct: 233 VKQEENGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGVKLSK-EEEGESVDPTLFKSLV 291

Query: 97  G 95
           G
Sbjct: 292 G 292



 Score = 34.3 bits (77), Expect(2) = 5e-13
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = -2

Query: 95  SLRYLTCTRIDILHGVG 45
           SLRYLTCTR DILH VG
Sbjct: 293 SLRYLTCTRPDILHAVG 309


>gb|AGH20671.1| reverse transcriptase, partial [Thlaspi arvense]
          Length = 315

 Score = 64.3 bits (155), Expect(2) = 1e-12
 Identities = 48/121 (39%), Positives = 66/121 (54%), Gaps = 12/121 (9%)
 Frame = -3

Query: 421 EHALYYKKTNDGDILLLCSYVDALNFKGNNPSLFKDFKETMTHV-------LLSGH*S-E 266
           EHALY K T + +IL+ C YVD L F G+NPS+F++FK+ MT         L+S +   E
Sbjct: 174 EHALYIK-TQNNNILIACLYVDDLIFTGSNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIE 232

Query: 265 AKRPRNPYFSSIRQSSQEI----QYIELQTGFYTWKCGQKLSKFDDDEERVDPTTLKSLD 98
            K+  N  F S    ++E+    +  +        +CG KLSK D+ E  VDPT  KSL 
Sbjct: 233 VKQEDNGIFISQEGYAKEVLKKFKMDDSNPVCTPMECGAKLSKHDEGES-VDPTLFKSLV 291

Query: 97  G 95
           G
Sbjct: 292 G 292



 Score = 34.3 bits (77), Expect(2) = 1e-12
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = -2

Query: 95  SLRYLTCTRIDILHGVG 45
           SLRYLTCTR DILH VG
Sbjct: 293 SLRYLTCTRPDILHAVG 309


>gb|AGH20680.1| reverse transcriptase, partial [Raphanus sativus]
          Length = 315

 Score = 63.5 bits (153), Expect(2) = 2e-12
 Identities = 47/121 (38%), Positives = 65/121 (53%), Gaps = 12/121 (9%)
 Frame = -3

Query: 421 EHALYYKKTNDGDILLLCSYVDALNFKGNNPSLFKDFKETMTHV-------LLSGH*S-E 266
           EHALY K T + DIL+ C YVD L F GNNP +F+DFK+ MT         L+S +   E
Sbjct: 174 EHALYIK-TQNNDILIACLYVDDLIFTGNNPIMFEDFKKEMTKEFEMTDIGLMSYYLGIE 232

Query: 265 AKRPRNPYFSSIRQSSQEI----QYIELQTGFYTWKCGQKLSKFDDDEERVDPTTLKSLD 98
            K+  N  F +    ++E+    +  +        +CG KLS  +++ E VDPT  KSL 
Sbjct: 233 VKQEENGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGVKLSN-EEEGESVDPTLFKSLV 291

Query: 97  G 95
           G
Sbjct: 292 G 292



 Score = 34.3 bits (77), Expect(2) = 2e-12
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = -2

Query: 95  SLRYLTCTRIDILHGVG 45
           SLRYLTCTR DILH VG
Sbjct: 293 SLRYLTCTRPDILHAVG 309


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score = 62.8 bits (151), Expect(2) = 3e-12
 Identities = 48/121 (39%), Positives = 66/121 (54%), Gaps = 12/121 (9%)
 Frame = -3

Query: 421  EHALYYKKTNDGDILLLCSYVDALNFKGNNPSLFKDFKETMTHV-------LLSGH*S-E 266
            EHALY K   + DIL+ C YVD L F GNNPS+F++FK+ MT         L+S +   E
Sbjct: 1013 EHALYIKIQKE-DILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIE 1071

Query: 265  AKRPRNPYFSSIRQSSQEI----QYIELQTGFYTWKCGQKLSKFDDDEERVDPTTLKSLD 98
             K+  N  F +    ++E+    +  +        +CG KLSK  ++ E VDPTT KSL 
Sbjct: 1072 VKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSK-KEEGEGVDPTTFKSLV 1130

Query: 97   G 95
            G
Sbjct: 1131 G 1131



 Score = 34.3 bits (77), Expect(2) = 3e-12
 Identities = 16/30 (53%), Positives = 20/30 (66%)
 Frame = -2

Query: 95   SLRYLTCTRIDILHGVG*LVDIWRNPKSKH 6
            SLRYLTCTR DIL+ VG +     +P + H
Sbjct: 1132 SLRYLTCTRPDILYAVGVVSRYMEHPTTTH 1161


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score = 62.8 bits (151), Expect(2) = 3e-12
 Identities = 48/121 (39%), Positives = 66/121 (54%), Gaps = 12/121 (9%)
 Frame = -3

Query: 421  EHALYYKKTNDGDILLLCSYVDALNFKGNNPSLFKDFKETMTHV-------LLSGH*S-E 266
            EHALY K   + DIL+ C YVD L F GNNPS+F++FK+ MT         L+S +   E
Sbjct: 1013 EHALYIKIQKE-DILIACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGLMSYYLGIE 1071

Query: 265  AKRPRNPYFSSIRQSSQEI----QYIELQTGFYTWKCGQKLSKFDDDEERVDPTTLKSLD 98
             K+  N  F +    ++E+    +  +        +CG KLSK  ++ E VDPTT KSL 
Sbjct: 1072 VKQEDNGIFITQEGYAKEVLKKFKIDDSNPVCTPMECGIKLSK-KEEGEGVDPTTFKSLV 1130

Query: 97   G 95
            G
Sbjct: 1131 G 1131



 Score = 34.3 bits (77), Expect(2) = 3e-12
 Identities = 16/30 (53%), Positives = 20/30 (66%)
 Frame = -2

Query: 95   SLRYLTCTRIDILHGVG*LVDIWRNPKSKH 6
            SLRYLTCTR DIL+ VG +     +P + H
Sbjct: 1132 SLRYLTCTRPDILYAVGVVSRYMEHPTTTH 1161


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score = 62.8 bits (151), Expect(2) = 3e-12
 Identities = 48/121 (39%), Positives = 66/121 (54%), Gaps = 12/121 (9%)
 Frame = -3

Query: 421  EHALYYKKTNDGDILLLCSYVDALNFKGNNPSLFKDFKETMTHV-------LLSGH*S-E 266
            EHALY K   + DIL+ C YVD L F GNNPS+F++FK+ MT         L+S +   E
Sbjct: 1013 EHALYIKIQKE-DILIACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGLMSYYLGIE 1071

Query: 265  AKRPRNPYFSSIRQSSQEI----QYIELQTGFYTWKCGQKLSKFDDDEERVDPTTLKSLD 98
             K+  N  F +    ++E+    +  +        +CG KLSK  ++ E VDPTT KSL 
Sbjct: 1072 VKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSK-KEEGEGVDPTTFKSLV 1130

Query: 97   G 95
            G
Sbjct: 1131 G 1131



 Score = 34.3 bits (77), Expect(2) = 3e-12
 Identities = 16/30 (53%), Positives = 20/30 (66%)
 Frame = -2

Query: 95   SLRYLTCTRIDILHGVG*LVDIWRNPKSKH 6
            SLRYLTCTR DIL+ VG +     +P + H
Sbjct: 1132 SLRYLTCTRPDILYAVGVVSRYMEHPTTTH 1161


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score = 62.8 bits (151), Expect(2) = 3e-12
 Identities = 48/121 (39%), Positives = 66/121 (54%), Gaps = 12/121 (9%)
 Frame = -3

Query: 421  EHALYYKKTNDGDILLLCSYVDALNFKGNNPSLFKDFKETMTHV-------LLSGH*S-E 266
            EHALY K   + DIL+ C YVD L F GNNPS+F++FK+ MT         L+S +   E
Sbjct: 981  EHALYIKIQKE-DILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIE 1039

Query: 265  AKRPRNPYFSSIRQSSQEI----QYIELQTGFYTWKCGQKLSKFDDDEERVDPTTLKSLD 98
             K+  N  F +    ++E+    +  +        +CG KLSK  ++ E VDPTT KSL 
Sbjct: 1040 VKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSK-KEEGEGVDPTTFKSLV 1098

Query: 97   G 95
            G
Sbjct: 1099 G 1099



 Score = 34.3 bits (77), Expect(2) = 3e-12
 Identities = 16/30 (53%), Positives = 20/30 (66%)
 Frame = -2

Query: 95   SLRYLTCTRIDILHGVG*LVDIWRNPKSKH 6
            SLRYLTCTR DIL+ VG +     +P + H
Sbjct: 1100 SLRYLTCTRPDILYAVGVVSRYMEHPTTTH 1129


>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
          Length = 1291

 Score = 62.8 bits (151), Expect(2) = 3e-12
 Identities = 48/121 (39%), Positives = 66/121 (54%), Gaps = 12/121 (9%)
 Frame = -3

Query: 421  EHALYYKKTNDGDILLLCSYVDALNFKGNNPSLFKDFKETMTHV-------LLSGH*S-E 266
            EHALY K   + DIL+ C YVD L F GNNPS+F++FK+ MT         L+S +   E
Sbjct: 952  EHALYIKIQKE-DILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIE 1010

Query: 265  AKRPRNPYFSSIRQSSQEI----QYIELQTGFYTWKCGQKLSKFDDDEERVDPTTLKSLD 98
             K+  N  F +    ++E+    +  +        +CG KLSK  ++ E VDPTT KSL 
Sbjct: 1011 VKQEDNRIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSK-KEEGEGVDPTTFKSLV 1069

Query: 97   G 95
            G
Sbjct: 1070 G 1070



 Score = 34.3 bits (77), Expect(2) = 3e-12
 Identities = 16/30 (53%), Positives = 20/30 (66%)
 Frame = -2

Query: 95   SLRYLTCTRIDILHGVG*LVDIWRNPKSKH 6
            SLRYLTCTR DIL+ VG +     +P + H
Sbjct: 1071 SLRYLTCTRPDILYAVGVVSRYMEHPTTTH 1100


>gb|AFK88553.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score = 66.2 bits (160), Expect(2) = 3e-12
 Identities = 50/121 (41%), Positives = 67/121 (55%), Gaps = 12/121 (9%)
 Frame = -3

Query: 421 EHALYYKKTNDGDILLLCSYVDALNFKGNNPSLFKDFKETMTHV-------LLSGH*S-E 266
           EHALY K   D DIL+ C YVD L F GNNPS+F++FK+ MT         L+S +   E
Sbjct: 174 EHALYIKIQKD-DILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIE 232

Query: 265 AKRPRNPYFSSIRQSSQEI----QYIELQTGFYTWKCGQKLSKFDDDEERVDPTTLKSLD 98
            K+  N  F S    ++E+    +  +        +CG KLSK +++ E VDPTT KSL 
Sbjct: 233 VKQEDNGIFISQEGYAKEVLKKFKMDDSNPVTTPMECGIKLSK-NEEGEGVDPTTFKSLV 291

Query: 97  G 95
           G
Sbjct: 292 G 292



 Score = 30.8 bits (68), Expect(2) = 3e-12
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -2

Query: 95  SLRYLTCTRIDILHGVG 45
           SLRYLTCT+ DIL+ VG
Sbjct: 293 SLRYLTCTKPDILYAVG 309


>gb|AGH20665.1| reverse transcriptase, partial [Turritis glabra]
          Length = 315

 Score = 65.1 bits (157), Expect(2) = 3e-12
 Identities = 50/121 (41%), Positives = 68/121 (56%), Gaps = 12/121 (9%)
 Frame = -3

Query: 421 EHALYYKKTNDGDILLLCSYVDALNFKGNNPSLFKDFKETMTHV-------LLSGH*S-E 266
           EHALY K  N GDIL+ C YVD L F GNNPS+F++FK+ MT         L+S +   E
Sbjct: 174 EHALYIKIQN-GDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIRLMSYYLGIE 232

Query: 265 AKRPRNPYFSSIRQSSQEI----QYIELQTGFYTWKCGQKLSKFDDDEERVDPTTLKSLD 98
            K+  N  F +    ++EI    +  +        +CG KLSK +++ ERVD T LK+L 
Sbjct: 233 VKQEENGIFITQECYAKEILKKFKMDDSNPVSTPMECGIKLSK-NEEGERVDLTLLKNLV 291

Query: 97  G 95
           G
Sbjct: 292 G 292



 Score = 32.0 bits (71), Expect(2) = 3e-12
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -2

Query: 95  SLRYLTCTRIDILHGVG 45
           SLRYLTCTR DIL+ VG
Sbjct: 293 SLRYLTCTRPDILYAVG 309


>gb|AFK88550.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score = 65.1 bits (157), Expect(2) = 3e-12
 Identities = 49/121 (40%), Positives = 67/121 (55%), Gaps = 12/121 (9%)
 Frame = -3

Query: 421 EHALYYKKTNDGDILLLCSYVDALNFKGNNPSLFKDFKETMTHV-------LLSGH*S-E 266
           EHALY K   D DIL+ C YVD L F GNNPS+F++FK+ MT         L+S +   E
Sbjct: 174 EHALYIKIQKD-DILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIE 232

Query: 265 AKRPRNPYFSSIRQSSQEI----QYIELQTGFYTWKCGQKLSKFDDDEERVDPTTLKSLD 98
            K+  N  F +    ++E+    +  +        +CG KLSK +++ E VDPTT KSL 
Sbjct: 233 VKQEDNGIFITQEGYAKEVLKKFKMDDSNPVTTPMECGIKLSK-NEEGEGVDPTTFKSLV 291

Query: 97  G 95
           G
Sbjct: 292 G 292



 Score = 32.0 bits (71), Expect(2) = 3e-12
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -2

Query: 95  SLRYLTCTRIDILHGVG 45
           SLRYLTCTR DIL+ VG
Sbjct: 293 SLRYLTCTRPDILYAVG 309


>gb|AFK88548.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score = 65.1 bits (157), Expect(2) = 3e-12
 Identities = 49/121 (40%), Positives = 67/121 (55%), Gaps = 12/121 (9%)
 Frame = -3

Query: 421 EHALYYKKTNDGDILLLCSYVDALNFKGNNPSLFKDFKETMTHV-------LLSGH*S-E 266
           EHALY K   D DIL+ C YVD L F GNNPS+F++FK+ MT         L+S +   E
Sbjct: 174 EHALYIKIQKD-DILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIE 232

Query: 265 AKRPRNPYFSSIRQSSQEI----QYIELQTGFYTWKCGQKLSKFDDDEERVDPTTLKSLD 98
            K+  N  F +    ++E+    +  +        +CG KLSK +++ E VDPTT KSL 
Sbjct: 233 VKQEDNGIFITQEGYAKEVLKRFKMDDSNPVTTPMECGIKLSK-NEEGEGVDPTTFKSLV 291

Query: 97  G 95
           G
Sbjct: 292 G 292



 Score = 32.0 bits (71), Expect(2) = 3e-12
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -2

Query: 95  SLRYLTCTRIDILHGVG 45
           SLRYLTCTR DIL+ VG
Sbjct: 293 SLRYLTCTRPDILYAVG 309


>gb|AFK88543.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score = 65.1 bits (157), Expect(2) = 3e-12
 Identities = 49/121 (40%), Positives = 67/121 (55%), Gaps = 12/121 (9%)
 Frame = -3

Query: 421 EHALYYKKTNDGDILLLCSYVDALNFKGNNPSLFKDFKETMTHV-------LLSGH*S-E 266
           EHALY K   D DIL+ C YVD L F GNNPS+F++FK+ MT         L+S +   E
Sbjct: 174 EHALYIKIQKD-DILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIE 232

Query: 265 AKRPRNPYFSSIRQSSQEI----QYIELQTGFYTWKCGQKLSKFDDDEERVDPTTLKSLD 98
            K+  N  F +    ++E+    +  +        +CG KLSK +++ E VDPTT KSL 
Sbjct: 233 VKQEDNRIFITQEGYAKEVLKKFKMDDSNPVTTPMECGIKLSK-NEEGEGVDPTTFKSLV 291

Query: 97  G 95
           G
Sbjct: 292 G 292



 Score = 32.0 bits (71), Expect(2) = 3e-12
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -2

Query: 95  SLRYLTCTRIDILHGVG 45
           SLRYLTCTR DIL+ VG
Sbjct: 293 SLRYLTCTRPDILYAVG 309


>gb|AFK88542.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera] gi|389595484|gb|AFK88545.1| reverse
           transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score = 65.1 bits (157), Expect(2) = 3e-12
 Identities = 49/121 (40%), Positives = 67/121 (55%), Gaps = 12/121 (9%)
 Frame = -3

Query: 421 EHALYYKKTNDGDILLLCSYVDALNFKGNNPSLFKDFKETMTHV-------LLSGH*S-E 266
           EHALY K   D DIL+ C YVD L F GNNPS+F++FK+ MT         L+S +   E
Sbjct: 174 EHALYIKIQKD-DILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIE 232

Query: 265 AKRPRNPYFSSIRQSSQEI----QYIELQTGFYTWKCGQKLSKFDDDEERVDPTTLKSLD 98
            K+  N  F +    ++E+    +  +        +CG KLSK +++ E VDPTT KSL 
Sbjct: 233 VKQEDNGIFITQEGYAKEVLKKFKMDDSNPVTTPMECGIKLSK-NEEGEGVDPTTFKSLV 291

Query: 97  G 95
           G
Sbjct: 292 G 292



 Score = 32.0 bits (71), Expect(2) = 3e-12
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -2

Query: 95  SLRYLTCTRIDILHGVG 45
           SLRYLTCTR DIL+ VG
Sbjct: 293 SLRYLTCTRPDILYAVG 309


>gb|AFK88541.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score = 65.1 bits (157), Expect(2) = 3e-12
 Identities = 49/121 (40%), Positives = 67/121 (55%), Gaps = 12/121 (9%)
 Frame = -3

Query: 421 EHALYYKKTNDGDILLLCSYVDALNFKGNNPSLFKDFKETMTHV-------LLSGH*S-E 266
           EHALY K   DG IL+ C YVD L F GNNPS+F++FK+ MT         L+S +   E
Sbjct: 174 EHALYIKIQKDG-ILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIE 232

Query: 265 AKRPRNPYFSSIRQSSQEI----QYIELQTGFYTWKCGQKLSKFDDDEERVDPTTLKSLD 98
            K+  N  F +    ++E+    +  +        +CG KLSK +++ E VDPTT KSL 
Sbjct: 233 VKQEDNGIFITQEGYAKEVHKKFKMDDSNPVTTPMECGIKLSK-NEEGEGVDPTTFKSLV 291

Query: 97  G 95
           G
Sbjct: 292 G 292



 Score = 32.0 bits (71), Expect(2) = 3e-12
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -2

Query: 95  SLRYLTCTRIDILHGVG 45
           SLRYLTCTR DIL+ VG
Sbjct: 293 SLRYLTCTRPDILYAVG 309