BLASTX nr result
ID: Paeonia22_contig00030269
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia22_contig00030269
(228 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 112 5e-23
ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D sub... 108 6e-22
emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera] 107 2e-21
ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-... 103 3e-20
ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D sub... 100 2e-19
ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricin... 97 2e-18
ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D sub... 91 2e-16
ref|XP_004511607.1| PREDICTED: DNA-directed RNA polymerase D sub... 91 2e-16
ref|XP_006573757.1| PREDICTED: DNA-directed RNA polymerase IV su... 90 3e-16
ref|XP_006573756.1| PREDICTED: DNA-directed RNA polymerase IV su... 90 3e-16
ref|XP_006573755.1| PREDICTED: DNA-directed RNA polymerase IV su... 90 3e-16
ref|XP_006573754.1| PREDICTED: DNA-directed RNA polymerase IV su... 90 3e-16
ref|XP_002886441.1| NRPD1a [Arabidopsis lyrata subsp. lyrata] gi... 87 2e-15
ref|XP_006590533.1| PREDICTED: DNA-directed RNA polymerase IV su... 86 4e-15
ref|XP_006391790.1| hypothetical protein EUTSA_v10023214mg [Eutr... 86 7e-15
ref|NP_176490.2| DNA-directed RNA polymerase IV subunit 1 [Arabi... 85 9e-15
ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV su... 84 2e-14
ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV su... 84 2e-14
ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase D sub... 84 2e-14
ref|XP_006300646.1| hypothetical protein CARUB_v10019657mg [Caps... 84 3e-14
>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D
subunit 1-like [Vitis vinifera]
Length = 1560
Score = 112 bits (280), Expect = 5e-23
Identities = 53/75 (70%), Positives = 66/75 (88%)
Frame = -3
Query: 226 LMFDERTRAYRKLVDFRGMANELGSRVLECLKLSKLISEKPSTTDSSSNVSGLKWMKEVV 47
L+FD+ +RAY+KLVDFRG ANEL RVL+CLK SKL SEK ++ DS+S +SGLKW+KEV+
Sbjct: 288 LIFDQHSRAYKKLVDFRGTANELSCRVLDCLKTSKLRSEKSTSKDSASKMSGLKWIKEVL 347
Query: 46 LGKRTDHSFRMVVVG 2
LGKRT+HSFRM+VVG
Sbjct: 348 LGKRTNHSFRMIVVG 362
>ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Fragaria
vesca subsp. vesca]
Length = 1438
Score = 108 bits (271), Expect = 6e-22
Identities = 56/85 (65%), Positives = 64/85 (75%), Gaps = 10/85 (11%)
Frame = -3
Query: 226 LMFDERTRAYRKLVDFRGMANELGSRVLECLKLSKLISEK----------PSTTDSSSNV 77
LMFD+RTRAYRKLVDFRG ANELGSRVL+CLK+SK+ EK DS S
Sbjct: 234 LMFDDRTRAYRKLVDFRGTANELGSRVLDCLKISKINKEKTGRDSISVEQQKIKDSPSRT 293
Query: 76 SGLKWMKEVVLGKRTDHSFRMVVVG 2
SGL+W+K+VVLGKR+DH FRMVVVG
Sbjct: 294 SGLRWIKDVVLGKRSDHCFRMVVVG 318
>emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]
Length = 1393
Score = 107 bits (266), Expect = 2e-21
Identities = 53/78 (67%), Positives = 66/78 (84%), Gaps = 3/78 (3%)
Frame = -3
Query: 226 LMFDERTRAYRKLVDFRGMANELGSRVLECLKLSK---LISEKPSTTDSSSNVSGLKWMK 56
L+FD+ +RAY+KLVDFRG ANEL RVL+CLK SK L SEK ++ DS+S +SGLKW+K
Sbjct: 255 LIFDQHSRAYKKLVDFRGTANELSCRVLDCLKTSKASNLRSEKSTSKDSASKMSGLKWIK 314
Query: 55 EVVLGKRTDHSFRMVVVG 2
EV+LGKRT+HSFRM+VVG
Sbjct: 315 EVLLGKRTNHSFRMIVVG 332
>ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-B, putative [Theobroma
cacao] gi|508777356|gb|EOY24612.1| DNA-directed RNA
polymerase II subunit RPB1-B, putative [Theobroma cacao]
Length = 1484
Score = 103 bits (256), Expect = 3e-20
Identities = 52/87 (59%), Positives = 64/87 (73%), Gaps = 12/87 (13%)
Frame = -3
Query: 226 LMFDERTRAYRKLVDFRGMANELGSRVLECLKLSKLISEKPS------------TTDSSS 83
L+FD+RTR Y+KL DFRG+ANEL S VLECLK+SKL EKPS DS+S
Sbjct: 257 LIFDQRTRVYKKLADFRGIANELSSHVLECLKISKLHLEKPSNEESALVLAQKRNKDSAS 316
Query: 82 NVSGLKWMKEVVLGKRTDHSFRMVVVG 2
N+SGL++MK+V+LGKR DH FRMV+ G
Sbjct: 317 NMSGLRYMKDVILGKRNDHCFRMVLTG 343
>ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Cucumis
sativus] gi|449494342|ref|XP_004159519.1| PREDICTED: LOW
QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
1-like [Cucumis sativus]
Length = 1469
Score = 100 bits (250), Expect = 2e-19
Identities = 51/87 (58%), Positives = 65/87 (74%), Gaps = 12/87 (13%)
Frame = -3
Query: 226 LMFDERTRAYRKLVDFRGMANELGSRVLECLKLSKLISE------------KPSTTDSSS 83
L+FDERTRAY+K+VDFRG ANELGSRVL+CLK+SK I + D+++
Sbjct: 255 LIFDERTRAYKKVVDFRGTANELGSRVLDCLKISKAIYNIFVFCLNHVNYYQKKIKDTAT 314
Query: 82 NVSGLKWMKEVVLGKRTDHSFRMVVVG 2
+ SGL+W+K+VVLGKR+DH FRMVVVG
Sbjct: 315 SSSGLRWIKDVVLGKRSDHCFRMVVVG 341
>ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricinus communis]
gi|223549595|gb|EEF51083.1| DNA-directed RNA polymerase,
putative [Ricinus communis]
Length = 1475
Score = 97.1 bits (240), Expect = 2e-18
Identities = 50/86 (58%), Positives = 63/86 (73%), Gaps = 11/86 (12%)
Frame = -3
Query: 226 LMFDERTRAYRKLVDFRGMANELGSRVLECLKLSKLISEKP-----------STTDSSSN 80
L+FD+RTRAY+K+VDFRG+A EL RVL+CLK SK+ +K DSSS+
Sbjct: 250 LVFDDRTRAYKKMVDFRGIAKELSFRVLDCLKTSKINPDKSVNNDDYMALQRKMNDSSSS 309
Query: 79 VSGLKWMKEVVLGKRTDHSFRMVVVG 2
SGL+W+K+VVLGKR D+SFRMVVVG
Sbjct: 310 SSGLRWIKDVVLGKRNDNSFRMVVVG 335
>ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X5
[Cicer arietinum]
Length = 1474
Score = 90.9 bits (224), Expect = 2e-16
Identities = 49/86 (56%), Positives = 60/86 (69%), Gaps = 11/86 (12%)
Frame = -3
Query: 226 LMFDERTRAYRKLVDFRGMANELGSRVLECLKLSKLISEK-PSTT----------DSSSN 80
L FD RTRA +KLVDFRG ANEL SRVL+CL+ SK+ +K PS +++ N
Sbjct: 251 LSFDNRTRACKKLVDFRGTANELSSRVLDCLRFSKINPDKTPSNVFTEIQLRKVGENACN 310
Query: 79 VSGLKWMKEVVLGKRTDHSFRMVVVG 2
SGL+WMK++VLGKR D SFR VVVG
Sbjct: 311 SSGLRWMKDIVLGKRNDSSFRTVVVG 336
>ref|XP_004511607.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X1
[Cicer arietinum] gi|502160026|ref|XP_004511608.1|
PREDICTED: DNA-directed RNA polymerase D subunit 1-like
isoform X2 [Cicer arietinum]
gi|502160029|ref|XP_004511609.1| PREDICTED: DNA-directed
RNA polymerase D subunit 1-like isoform X3 [Cicer
arietinum] gi|502160032|ref|XP_004511610.1| PREDICTED:
DNA-directed RNA polymerase D subunit 1-like isoform X4
[Cicer arietinum]
Length = 1475
Score = 90.9 bits (224), Expect = 2e-16
Identities = 49/86 (56%), Positives = 60/86 (69%), Gaps = 11/86 (12%)
Frame = -3
Query: 226 LMFDERTRAYRKLVDFRGMANELGSRVLECLKLSKLISEK-PSTT----------DSSSN 80
L FD RTRA +KLVDFRG ANEL SRVL+CL+ SK+ +K PS +++ N
Sbjct: 251 LSFDNRTRACKKLVDFRGTANELSSRVLDCLRFSKINPDKTPSNVFTEIQLRKVGENACN 310
Query: 79 VSGLKWMKEVVLGKRTDHSFRMVVVG 2
SGL+WMK++VLGKR D SFR VVVG
Sbjct: 311 SSGLRWMKDIVLGKRNDSSFRTVVVG 336
>ref|XP_006573757.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X4
[Glycine max]
Length = 1381
Score = 90.1 bits (222), Expect = 3e-16
Identities = 47/86 (54%), Positives = 61/86 (70%), Gaps = 11/86 (12%)
Frame = -3
Query: 226 LMFDERTRAYRKLVDFRGMANELGSRVLECLKLSKLISEKPSTT-----------DSSSN 80
L FD+RTR+ +KLVDFRG ANEL SRVL+CL++SKL +K + +++ N
Sbjct: 163 LSFDDRTRSCKKLVDFRGTANELSSRVLDCLRISKLNPDKTPNSIFADIQQRKIGENAFN 222
Query: 79 VSGLKWMKEVVLGKRTDHSFRMVVVG 2
SGL+W+K+VVLGKR D SFR VVVG
Sbjct: 223 SSGLRWIKDVVLGKRNDSSFRTVVVG 248
>ref|XP_006573756.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X3
[Glycine max]
Length = 1455
Score = 90.1 bits (222), Expect = 3e-16
Identities = 47/86 (54%), Positives = 61/86 (70%), Gaps = 11/86 (12%)
Frame = -3
Query: 226 LMFDERTRAYRKLVDFRGMANELGSRVLECLKLSKLISEKPSTT-----------DSSSN 80
L FD+RTR+ +KLVDFRG ANEL SRVL+CL++SKL +K + +++ N
Sbjct: 240 LSFDDRTRSCKKLVDFRGTANELSSRVLDCLRISKLNPDKTPNSIFADIQQRKIGENAFN 299
Query: 79 VSGLKWMKEVVLGKRTDHSFRMVVVG 2
SGL+W+K+VVLGKR D SFR VVVG
Sbjct: 300 SSGLRWIKDVVLGKRNDSSFRTVVVG 325
>ref|XP_006573755.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
[Glycine max]
Length = 1457
Score = 90.1 bits (222), Expect = 3e-16
Identities = 47/86 (54%), Positives = 61/86 (70%), Gaps = 11/86 (12%)
Frame = -3
Query: 226 LMFDERTRAYRKLVDFRGMANELGSRVLECLKLSKLISEKPSTT-----------DSSSN 80
L FD+RTR+ +KLVDFRG ANEL SRVL+CL++SKL +K + +++ N
Sbjct: 240 LSFDDRTRSCKKLVDFRGTANELSSRVLDCLRISKLNPDKTPNSIFADIQQRKIGENAFN 299
Query: 79 VSGLKWMKEVVLGKRTDHSFRMVVVG 2
SGL+W+K+VVLGKR D SFR VVVG
Sbjct: 300 SSGLRWIKDVVLGKRNDSSFRTVVVG 325
>ref|XP_006573754.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Glycine max]
Length = 1458
Score = 90.1 bits (222), Expect = 3e-16
Identities = 47/86 (54%), Positives = 61/86 (70%), Gaps = 11/86 (12%)
Frame = -3
Query: 226 LMFDERTRAYRKLVDFRGMANELGSRVLECLKLSKLISEKPSTT-----------DSSSN 80
L FD+RTR+ +KLVDFRG ANEL SRVL+CL++SKL +K + +++ N
Sbjct: 240 LSFDDRTRSCKKLVDFRGTANELSSRVLDCLRISKLNPDKTPNSIFADIQQRKIGENAFN 299
Query: 79 VSGLKWMKEVVLGKRTDHSFRMVVVG 2
SGL+W+K+VVLGKR D SFR VVVG
Sbjct: 300 SSGLRWIKDVVLGKRNDSSFRTVVVG 325
>ref|XP_002886441.1| NRPD1a [Arabidopsis lyrata subsp. lyrata]
gi|297332282|gb|EFH62700.1| NRPD1a [Arabidopsis lyrata
subsp. lyrata]
Length = 1456
Score = 87.0 bits (214), Expect = 2e-15
Identities = 45/85 (52%), Positives = 60/85 (70%), Gaps = 10/85 (11%)
Frame = -3
Query: 226 LMFDERTRAYRKLVDFRGMANELGSRVLECLKLSKLISEKPSTTDSSSN----------V 77
L+FDERTR YRKLV F G EL SRV+EC++ S+L SE S++ S+N +
Sbjct: 244 LVFDERTRIYRKLVGFEGNTLELSSRVIECMQYSRLFSENVSSSQDSANPYQKKSDTPKL 303
Query: 76 SGLKWMKEVVLGKRTDHSFRMVVVG 2
GL++MK+V+LGKR+DH+FR VVVG
Sbjct: 304 CGLRFMKDVLLGKRSDHTFRTVVVG 328
>ref|XP_006590533.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Glycine
max]
Length = 1369
Score = 86.3 bits (212), Expect = 4e-15
Identities = 45/86 (52%), Positives = 59/86 (68%), Gaps = 11/86 (12%)
Frame = -3
Query: 226 LMFDERTRAYRKLVDFRGMANELGSRVLECLKLSKLISEKPSTT-----------DSSSN 80
L FD+RTR+ +KLVDFRG NEL SRVL+CL++SKL +K + +++ N
Sbjct: 154 LSFDDRTRSCKKLVDFRGTPNELSSRVLDCLRISKLNPDKTPNSIFADIQQRKIGENACN 213
Query: 79 VSGLKWMKEVVLGKRTDHSFRMVVVG 2
SGL+W+K+VVLGKR D S R VVVG
Sbjct: 214 SSGLRWIKDVVLGKRNDSSLRTVVVG 239
>ref|XP_006391790.1| hypothetical protein EUTSA_v10023214mg [Eutrema salsugineum]
gi|557088296|gb|ESQ29076.1| hypothetical protein
EUTSA_v10023214mg [Eutrema salsugineum]
Length = 1465
Score = 85.5 bits (210), Expect = 7e-15
Identities = 44/85 (51%), Positives = 60/85 (70%), Gaps = 10/85 (11%)
Frame = -3
Query: 226 LMFDERTRAYRKLVDFRGMANELGSRVLECLKLSKLISEKPSTTDSSSN----------V 77
L+FDERTR Y+KLV F G EL SRV+EC++ S+L SE S++ S+N +
Sbjct: 245 LIFDERTRIYKKLVGFEGNLLELSSRVIECMQYSRLFSENVSSSQESANPYQKKSDTPKL 304
Query: 76 SGLKWMKEVVLGKRTDHSFRMVVVG 2
GL++MK+V+LGKR+DH+FR VVVG
Sbjct: 305 CGLRFMKDVLLGKRSDHTFRTVVVG 329
>ref|NP_176490.2| DNA-directed RNA polymerase IV subunit 1 [Arabidopsis thaliana]
gi|334183598|ref|NP_001185298.1| DNA-directed RNA
polymerase IV subunit 1 [Arabidopsis thaliana]
gi|75335311|sp|Q9LQ02.1|NRPD1_ARATH RecName:
Full=DNA-directed RNA polymerase IV subunit 1; AltName:
Full=DNA-directed RNA polymerase D subunit 1;
Short=AtNRPD1a; Short=Nuclear RNA polymerase D 1a;
AltName: Full=Protein RNA-DIRECTED DNA METHYLATION
DEFECTIVE 3; AltName: Full=Protein SILENCING DEFECTIVE
4; AltName: Full=Protein SILENCING MOVEMENT DEFICIENT 2;
AltName: Full=RNA polymerase IV subunit 1a; Short=POL IV
1a gi|8493592|gb|AAF75815.1|AC011000_18 Contains
similarity to DNA-directed RNA Polymerase alpha-subunit
from Methanococcus jannaschii gi|3915860 and contains
Ribosomal protein L36 PF|00444 and RNA-Polymerase
alpha-subunit PF|00623 domains. EST gb|AA597311 comes
from this gene [Arabidopsis thaliana]
gi|12323252|gb|AAG51604.1|AC010795_8 RNA polymerase IIA
largest subunit, putative; 12353-6556 [Arabidopsis
thaliana] gi|59939208|gb|AAX12372.1| DNA-directed RNA
polymerase beta subunit [Arabidopsis thaliana]
gi|68300852|gb|AAY89363.1| RNA polymerase IV largest
subunit [Arabidopsis thaliana]
gi|332195920|gb|AEE34041.1| nuclear RNA polymerase D1A
[Arabidopsis thaliana] gi|332195921|gb|AEE34042.1|
nuclear RNA polymerase D1A [Arabidopsis thaliana]
Length = 1453
Score = 85.1 bits (209), Expect = 9e-15
Identities = 44/85 (51%), Positives = 60/85 (70%), Gaps = 10/85 (11%)
Frame = -3
Query: 226 LMFDERTRAYRKLVDFRGMANELGSRVLECLKLSKLISEKPSTTDSSSN----------V 77
L+FDERTR Y+KLV F G EL SRV+EC++ S+L SE S++ S+N +
Sbjct: 244 LIFDERTRIYKKLVGFEGNTLELSSRVMECMQYSRLFSETVSSSKDSANPYQKKSDTPKL 303
Query: 76 SGLKWMKEVVLGKRTDHSFRMVVVG 2
GL++MK+V+LGKR+DH+FR VVVG
Sbjct: 304 CGLRFMKDVLLGKRSDHTFRTVVVG 328
>ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
[Solanum tuberosum]
Length = 1233
Score = 84.3 bits (207), Expect = 2e-14
Identities = 39/75 (52%), Positives = 58/75 (77%)
Frame = -3
Query: 226 LMFDERTRAYRKLVDFRGMANELGSRVLECLKLSKLISEKPSTTDSSSNVSGLKWMKEVV 47
++FDE R YRKL+DFRG AN+L VL+ +K+SK+ +++ D ++ +GLK++KE+V
Sbjct: 28 MIFDESNRLYRKLIDFRGTANDLSMCVLDRIKVSKIRADRSVINDPNAPATGLKYVKELV 87
Query: 46 LGKRTDHSFRMVVVG 2
L KRT+H+FRMVVVG
Sbjct: 88 LAKRTNHAFRMVVVG 102
>ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Solanum tuberosum]
Length = 1446
Score = 84.3 bits (207), Expect = 2e-14
Identities = 39/75 (52%), Positives = 58/75 (77%)
Frame = -3
Query: 226 LMFDERTRAYRKLVDFRGMANELGSRVLECLKLSKLISEKPSTTDSSSNVSGLKWMKEVV 47
++FDE R YRKL+DFRG AN+L VL+ +K+SK+ +++ D ++ +GLK++KE+V
Sbjct: 241 MIFDESNRLYRKLIDFRGTANDLSMCVLDRIKVSKIRADRSVINDPNAPATGLKYVKELV 300
Query: 46 LGKRTDHSFRMVVVG 2
L KRT+H+FRMVVVG
Sbjct: 301 LAKRTNHAFRMVVVG 315
>ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase D subunit 1 [Solanum
lycopersicum]
Length = 1446
Score = 84.3 bits (207), Expect = 2e-14
Identities = 39/75 (52%), Positives = 58/75 (77%)
Frame = -3
Query: 226 LMFDERTRAYRKLVDFRGMANELGSRVLECLKLSKLISEKPSTTDSSSNVSGLKWMKEVV 47
++FDE R YRKL+DFRG AN+L VL+ +K+SK+ +++ D ++ +GLK++KE+V
Sbjct: 241 MIFDESNRLYRKLIDFRGTANDLSMCVLDRIKVSKIRADRSVINDPNAPATGLKYVKELV 300
Query: 46 LGKRTDHSFRMVVVG 2
L KRT+H+FRMVVVG
Sbjct: 301 LAKRTNHAFRMVVVG 315
>ref|XP_006300646.1| hypothetical protein CARUB_v10019657mg [Capsella rubella]
gi|482569356|gb|EOA33544.1| hypothetical protein
CARUB_v10019657mg [Capsella rubella]
Length = 1459
Score = 83.6 bits (205), Expect = 3e-14
Identities = 42/85 (49%), Positives = 60/85 (70%), Gaps = 10/85 (11%)
Frame = -3
Query: 226 LMFDERTRAYRKLVDFRGMANELGSRVLECLKLSKLISEKPSTTDSSSN----------V 77
L+FDERTR Y++LV F G EL SRV+EC++ S+L SE S++ S+N +
Sbjct: 247 LVFDERTRIYKRLVGFEGNTLELSSRVVECMQYSRLFSETVSSSQDSANPYQKKPDTPKL 306
Query: 76 SGLKWMKEVVLGKRTDHSFRMVVVG 2
GL++MK+V+LGKR+DH+FR +VVG
Sbjct: 307 CGLRFMKDVLLGKRSDHTFRAIVVG 331