BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia22_contig00030248
         (742 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   374   e-101
ref|XP_007032921.1| DNA/RNA polymerases superfamily protein [The...   365   7e-99
ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prun...   359   5e-97
sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymeras...   356   4e-96
ref|XP_006430989.1| hypothetical protein CICLE_v10010966mg [Citr...   356   5e-96
ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citr...   356   5e-96
ref|XP_006430987.1| hypothetical protein CICLE_v10010966mg [Citr...   356   5e-96
ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   354   2e-95
dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymer...   353   3e-95
sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymeras...   353   5e-95
ref|XP_006384251.1| hypothetical protein POPTR_0004s11060g [Popu...   349   5e-94
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi...   347   2e-93
ref|XP_004304185.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   346   4e-93
ref|XP_004232127.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   341   1e-91
ref|XP_002533596.1| conserved hypothetical protein [Ricinus comm...   341   1e-91
ref|XP_006338320.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   338   9e-91
gb|EYU39350.1| hypothetical protein MIMGU_mgv1a000681mg [Mimulus...   334   2e-89
gb|EYU28900.1| hypothetical protein MIMGU_mgv1a000798mg [Mimulus...   328   1e-87
ref|XP_004141596.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   328   2e-87
ref|XP_006602976.1| PREDICTED: DNA-directed RNA polymerase 2B, c...   325   1e-86

>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial [Vitis vinifera]
           gi|298204431|emb|CBI16911.3| unnamed protein product
           [Vitis vinifera]
          Length = 1035

 Score =  374 bits (960), Expect = e-101
 Identities = 190/249 (76%), Positives = 210/249 (84%), Gaps = 2/249 (0%)
 Frame = +1

Query: 1   MGQGKYQFLRRRQVKIETEAWEQAANEYKDLLKDMCEQKLAPNLPYIKSLFLGWFEPLCN 180
           M QG+Y  LRRRQVKIETEAWE AA EYK+LL DMCEQKLAPNLPY+KSLFLGWFEPL +
Sbjct: 189 MEQGRYLRLRRRQVKIETEAWELAAKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLRD 248

Query: 181 AITAEQELCRQGKNRAAYARYFDLLPADMMSVITMHKLMGLVMIGGEHGSARVVQAACML 360
           AI  EQELCR GKN+AAYA YFD LPADMMSVITMHKL+GL+M GGEHGS RVVQAAC++
Sbjct: 249 AIVKEQELCRLGKNKAAYAPYFDQLPADMMSVITMHKLVGLLMTGGEHGSTRVVQAACVI 308

Query: 361 GEAIEQEVRIHKFLEXXXXXXVDRDKNA-GDRSEIVIQEQDKLRKKVTNLIKKQKLQAVR 537
           G+AIEQEVRIH FLE      V +DKN  G   + VI EQ+KLRKKVTNL+KKQKL A R
Sbjct: 309 GDAIEQEVRIHNFLEKTKRKKVGKDKNVEGGGFDPVIHEQEKLRKKVTNLMKKQKLHAAR 368

Query: 538 QIVKGHDDLKPWGPEVRAKVGSRLIELLLQTAYIQPPAD-QLADGPPDIRPAFVHTSKTM 714
           QIVKGHD+ KPWGPE +AKVGSRLIELL+QTAYIQPP D QLAD PPDIRPAFVHT KT+
Sbjct: 369 QIVKGHDNSKPWGPEAKAKVGSRLIELLMQTAYIQPPVDNQLADTPPDIRPAFVHTFKTV 428

Query: 715 VKETKKISR 741
           ++E KKI R
Sbjct: 429 MREAKKIGR 437


>ref|XP_007032921.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
           gi|508711950|gb|EOY03847.1| DNA/RNA polymerases
           superfamily protein [Theobroma cacao]
          Length = 1100

 Score =  365 bits (938), Expect = 7e-99
 Identities = 183/248 (73%), Positives = 208/248 (83%), Gaps = 1/248 (0%)
 Frame = +1

Query: 1   MGQGKYQFLRRRQVKIETEAWEQAANEYKDLLKDMCEQKLAPNLPYIKSLFLGWFEPLCN 180
           MG+ KY+FLRRRQVKIETEAWEQAA EY++LL DMCE KLAPNLPYIKSLFLGWFEPL +
Sbjct: 187 MGESKYRFLRRRQVKIETEAWEQAAKEYRELLMDMCEHKLAPNLPYIKSLFLGWFEPLRD 246

Query: 181 AITAEQELCRQGKNRAAYARYFDLLPADMMSVITMHKLMGLVMIGGEHGSARVVQAACML 360
           AI  EQEL R GK RA YA Y D LPADM +VITMHKLMGL+M GGEHG ARVVQAAC++
Sbjct: 247 AIIKEQELYRLGKLRAGYAGYLDQLPADMTAVITMHKLMGLLMTGGEHGCARVVQAACLI 306

Query: 361 GEAIEQEVRIHKFLEXXXXXXVD-RDKNAGDRSEIVIQEQDKLRKKVTNLIKKQKLQAVR 537
           G+AIEQEVRIHKFLE      VD ++++ GD+    I+EQ+KLRKKVT+LIKKQKL AVR
Sbjct: 307 GDAIEQEVRIHKFLEKTKKKRVDKKNEDEGDKPNAEIKEQEKLRKKVTDLIKKQKLPAVR 366

Query: 538 QIVKGHDDLKPWGPEVRAKVGSRLIELLLQTAYIQPPADQLADGPPDIRPAFVHTSKTMV 717
           QIVKG DD KPWG + +AKVGS LIELL+QTAYIQPPADQLAD PPD+RPAFVH+ +T+V
Sbjct: 367 QIVKGQDDTKPWGQDAKAKVGSHLIELLMQTAYIQPPADQLADCPPDVRPAFVHSLRTVV 426

Query: 718 KETKKISR 741
           KE KK  R
Sbjct: 427 KENKKTGR 434


>ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prunus persica]
           gi|462411068|gb|EMJ16117.1| hypothetical protein
           PRUPE_ppa000719mg [Prunus persica]
          Length = 1024

 Score =  359 bits (922), Expect = 5e-97
 Identities = 178/247 (72%), Positives = 204/247 (82%)
 Frame = +1

Query: 1   MGQGKYQFLRRRQVKIETEAWEQAANEYKDLLKDMCEQKLAPNLPYIKSLFLGWFEPLCN 180
           MGQGKY  L+RRQ+KIETEAWE+AA EY++L+ DMCEQKLAPNLPY+KSLFLGWFEPL N
Sbjct: 181 MGQGKYHMLKRRQIKIETEAWERAAKEYRELMMDMCEQKLAPNLPYMKSLFLGWFEPLRN 240

Query: 181 AITAEQELCRQGKNRAAYARYFDLLPADMMSVITMHKLMGLVMIGGEHGSARVVQAACML 360
           AI  EQ+LCR+GKN+ AYA Y D LPADMMSVITMHKLMGL+M GGEHG+ RVV AAC +
Sbjct: 241 AIDKEQDLCRKGKNKTAYAPYIDQLPADMMSVITMHKLMGLLMTGGEHGTCRVVAAACTI 300

Query: 361 GEAIEQEVRIHKFLEXXXXXXVDRDKNAGDRSEIVIQEQDKLRKKVTNLIKKQKLQAVRQ 540
           GEAIEQEVRIHKFLE      VD+D+  G+ S+   +E++KL KKVTNL+KKQKL+AVR 
Sbjct: 301 GEAIEQEVRIHKFLEMTRKKKVDKDQENGE-SDAAKKEREKLNKKVTNLMKKQKLKAVRG 359

Query: 541 IVKGHDDLKPWGPEVRAKVGSRLIELLLQTAYIQPPADQLADGPPDIRPAFVHTSKTMVK 720
           IV  HD  K W  E RAKVGSRLIELL QTA+IQPPADQLADGPPDIRPAFVHT +T+ K
Sbjct: 360 IVSKHDASKSWSLEARAKVGSRLIELLTQTAFIQPPADQLADGPPDIRPAFVHTFRTVAK 419

Query: 721 ETKKISR 741
           + K  SR
Sbjct: 420 DAKNASR 426


>sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial; AltName: Full=NsRpoT-B;
           AltName: Full=T7 bacteriophage-type single subunit RNA
           polymerase 2; Flags: Precursor
           gi|21425639|emb|CAC82575.2| phage-type RNA polymerase
           [Nicotiana sylvestris]
          Length = 1020

 Score =  356 bits (914), Expect = 4e-96
 Identities = 179/247 (72%), Positives = 206/247 (83%)
 Frame = +1

Query: 1   MGQGKYQFLRRRQVKIETEAWEQAANEYKDLLKDMCEQKLAPNLPYIKSLFLGWFEPLCN 180
           MG  KYQ L+RRQVK+ETEAWEQAA EYK+LL DMCEQKLAPNLPY+KSLFLGWFEPL +
Sbjct: 177 MGHRKYQTLKRRQVKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRD 236

Query: 181 AITAEQELCRQGKNRAAYARYFDLLPADMMSVITMHKLMGLVMIGGEHGSARVVQAACML 360
            I  EQELC QGK++AAYA+YF  LPADMM+VITMHKLMGL+M GG+HG+ARVVQAA ++
Sbjct: 237 KIAEEQELCSQGKSKAAYAKYFYQLPADMMAVITMHKLMGLLMTGGDHGTARVVQAALVI 296

Query: 361 GEAIEQEVRIHKFLEXXXXXXVDRDKNAGDRSEIVIQEQDKLRKKVTNLIKKQKLQAVRQ 540
           G+AIEQEVRIH FLE       ++DK   D  E V QEQ+KLRKKVTNL+KKQKL+AV Q
Sbjct: 297 GDAIEQEVRIHNFLEKTKKQKAEKDKQKED-GEHVTQEQEKLRKKVTNLMKKQKLRAVGQ 355

Query: 541 IVKGHDDLKPWGPEVRAKVGSRLIELLLQTAYIQPPADQLADGPPDIRPAFVHTSKTMVK 720
           IV+  DD KPWG + RAKVGSRLI+LLLQTAYIQPPA+QLA  PPDIRPAFVH+ +T+ K
Sbjct: 356 IVRRQDDSKPWGQDARAKVGSRLIDLLLQTAYIQPPANQLAVDPPDIRPAFVHSVRTVAK 415

Query: 721 ETKKISR 741
           ETK  SR
Sbjct: 416 ETKSASR 422


>ref|XP_006430989.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
           gi|557533046|gb|ESR44229.1| hypothetical protein
           CICLE_v10010966mg [Citrus clementina]
          Length = 928

 Score =  356 bits (913), Expect = 5e-96
 Identities = 178/245 (72%), Positives = 200/245 (81%), Gaps = 2/245 (0%)
 Frame = +1

Query: 1   MGQGKYQFLRRRQVKIETEAWEQAANEYKDLLKDMCEQKLAPNLPYIKSLFLGWFEPLCN 180
           MG GKY+ L+ RQVKIETEAWEQAANEY++LL DMCEQKLAPNLPY+KSLFLGWFEPL +
Sbjct: 184 MGSGKYRMLKMRQVKIETEAWEQAANEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRD 243

Query: 181 AITAEQELCRQGKNRAAYARYFDLLPADMMSVITMHKLMGLVMIGGEHGSARVVQAACML 360
           AI  EQE CR  K++ AYA YFD LPADMM+VITMHKLMGL+M GGEHG ARVVQAAC++
Sbjct: 244 AIAKEQERCRMAKHKVAYAPYFDQLPADMMAVITMHKLMGLLMTGGEHGRARVVQAACII 303

Query: 361 GEAIEQEVRIHKFLEXXXXXXVDRDK--NAGDRSEIVIQEQDKLRKKVTNLIKKQKLQAV 534
           G+AIEQEVRIHKFLE        ++K    GD S  V  EQ+KLRKKVT+LIKKQKL AV
Sbjct: 304 GDAIEQEVRIHKFLEKTKKKNETKNKEDEEGDESNTVTTEQEKLRKKVTDLIKKQKLPAV 363

Query: 535 RQIVKGHDDLKPWGPEVRAKVGSRLIELLLQTAYIQPPADQLADGPPDIRPAFVHTSKTM 714
           R+IVKG DD KPWG + RAKVGSR+IELL QTAYIQ PADQL D PPDI PAF HT +T+
Sbjct: 364 RRIVKGQDDFKPWGQDARAKVGSRVIELLTQTAYIQSPADQLVDAPPDIFPAFTHTLRTV 423

Query: 715 VKETK 729
            KETK
Sbjct: 424 SKETK 428


>ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
           gi|557533045|gb|ESR44228.1| hypothetical protein
           CICLE_v10010966mg [Citrus clementina]
          Length = 1030

 Score =  356 bits (913), Expect = 5e-96
 Identities = 178/245 (72%), Positives = 200/245 (81%), Gaps = 2/245 (0%)
 Frame = +1

Query: 1   MGQGKYQFLRRRQVKIETEAWEQAANEYKDLLKDMCEQKLAPNLPYIKSLFLGWFEPLCN 180
           MG GKY+ L+ RQVKIETEAWEQAANEY++LL DMCEQKLAPNLPY+KSLFLGWFEPL +
Sbjct: 184 MGSGKYRMLKMRQVKIETEAWEQAANEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRD 243

Query: 181 AITAEQELCRQGKNRAAYARYFDLLPADMMSVITMHKLMGLVMIGGEHGSARVVQAACML 360
           AI  EQE CR  K++ AYA YFD LPADMM+VITMHKLMGL+M GGEHG ARVVQAAC++
Sbjct: 244 AIAKEQERCRMAKHKVAYAPYFDQLPADMMAVITMHKLMGLLMTGGEHGRARVVQAACII 303

Query: 361 GEAIEQEVRIHKFLEXXXXXXVDRDK--NAGDRSEIVIQEQDKLRKKVTNLIKKQKLQAV 534
           G+AIEQEVRIHKFLE        ++K    GD S  V  EQ+KLRKKVT+LIKKQKL AV
Sbjct: 304 GDAIEQEVRIHKFLEKTKKKNETKNKEDEEGDESNTVTTEQEKLRKKVTDLIKKQKLPAV 363

Query: 535 RQIVKGHDDLKPWGPEVRAKVGSRLIELLLQTAYIQPPADQLADGPPDIRPAFVHTSKTM 714
           R+IVKG DD KPWG + RAKVGSR+IELL QTAYIQ PADQL D PPDI PAF HT +T+
Sbjct: 364 RRIVKGQDDFKPWGQDARAKVGSRVIELLTQTAYIQSPADQLVDAPPDIFPAFTHTLRTV 423

Query: 715 VKETK 729
            KETK
Sbjct: 424 SKETK 428


>ref|XP_006430987.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
           gi|557533044|gb|ESR44227.1| hypothetical protein
           CICLE_v10010966mg [Citrus clementina]
          Length = 933

 Score =  356 bits (913), Expect = 5e-96
 Identities = 178/245 (72%), Positives = 200/245 (81%), Gaps = 2/245 (0%)
 Frame = +1

Query: 1   MGQGKYQFLRRRQVKIETEAWEQAANEYKDLLKDMCEQKLAPNLPYIKSLFLGWFEPLCN 180
           MG GKY+ L+ RQVKIETEAWEQAANEY++LL DMCEQKLAPNLPY+KSLFLGWFEPL +
Sbjct: 184 MGSGKYRMLKMRQVKIETEAWEQAANEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRD 243

Query: 181 AITAEQELCRQGKNRAAYARYFDLLPADMMSVITMHKLMGLVMIGGEHGSARVVQAACML 360
           AI  EQE CR  K++ AYA YFD LPADMM+VITMHKLMGL+M GGEHG ARVVQAAC++
Sbjct: 244 AIAKEQERCRMAKHKVAYAPYFDQLPADMMAVITMHKLMGLLMTGGEHGRARVVQAACII 303

Query: 361 GEAIEQEVRIHKFLEXXXXXXVDRDK--NAGDRSEIVIQEQDKLRKKVTNLIKKQKLQAV 534
           G+AIEQEVRIHKFLE        ++K    GD S  V  EQ+KLRKKVT+LIKKQKL AV
Sbjct: 304 GDAIEQEVRIHKFLEKTKKKNETKNKEDEEGDESNTVTTEQEKLRKKVTDLIKKQKLPAV 363

Query: 535 RQIVKGHDDLKPWGPEVRAKVGSRLIELLLQTAYIQPPADQLADGPPDIRPAFVHTSKTM 714
           R+IVKG DD KPWG + RAKVGSR+IELL QTAYIQ PADQL D PPDI PAF HT +T+
Sbjct: 364 RRIVKGQDDFKPWGQDARAKVGSRVIELLTQTAYIQSPADQLVDAPPDIFPAFTHTLRTV 423

Query: 715 VKETK 729
            KETK
Sbjct: 424 SKETK 428


>ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial-like [Citrus sinensis]
          Length = 1026

 Score =  354 bits (908), Expect = 2e-95
 Identities = 177/245 (72%), Positives = 200/245 (81%), Gaps = 2/245 (0%)
 Frame = +1

Query: 1   MGQGKYQFLRRRQVKIETEAWEQAANEYKDLLKDMCEQKLAPNLPYIKSLFLGWFEPLCN 180
           MG GKY+ L+ RQVKIETEAWE+AANEY++LL DMCEQKLAPNLPY+KSLFLGWFEPL +
Sbjct: 180 MGSGKYRMLKMRQVKIETEAWEKAANEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRD 239

Query: 181 AITAEQELCRQGKNRAAYARYFDLLPADMMSVITMHKLMGLVMIGGEHGSARVVQAACML 360
           AI  EQE CR  K++ AYA YFD LPADMM+VITMHKLMGL+M GGEHG ARVVQAAC++
Sbjct: 240 AIAKEQERCRMAKHKVAYAPYFDQLPADMMAVITMHKLMGLLMTGGEHGRARVVQAACII 299

Query: 361 GEAIEQEVRIHKFLEXXXXXXVDRDK--NAGDRSEIVIQEQDKLRKKVTNLIKKQKLQAV 534
           G+AIEQEVRIHKFLE        ++K    GD S  V  EQ+KLRKKVT+LIKKQKL AV
Sbjct: 300 GDAIEQEVRIHKFLEKTKKKNETKNKEDEEGDESNTVTTEQEKLRKKVTDLIKKQKLPAV 359

Query: 535 RQIVKGHDDLKPWGPEVRAKVGSRLIELLLQTAYIQPPADQLADGPPDIRPAFVHTSKTM 714
           R+IVKG DD KPWG + RAKVGSR+IELL QTAYIQ PADQLAD PPDI PAF H  +T+
Sbjct: 360 RRIVKGQDDFKPWGQDARAKVGSRVIELLTQTAYIQSPADQLADAPPDIFPAFTHALRTV 419

Query: 715 VKETK 729
            KETK
Sbjct: 420 SKETK 424


>dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
           sylvestris] gi|17221595|dbj|BAB78465.1| T7
           bacteriophage-type single subunit RNA polymerase
           [Nicotiana sylvestris]
          Length = 1020

 Score =  353 bits (907), Expect = 3e-95
 Identities = 178/247 (72%), Positives = 205/247 (82%)
 Frame = +1

Query: 1   MGQGKYQFLRRRQVKIETEAWEQAANEYKDLLKDMCEQKLAPNLPYIKSLFLGWFEPLCN 180
           MG  KYQ L+RRQVK+ETEAWEQAA EYK+LL DMCEQKLAPNLPY+KSLFLGWFEPL +
Sbjct: 177 MGHRKYQTLKRRQVKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRD 236

Query: 181 AITAEQELCRQGKNRAAYARYFDLLPADMMSVITMHKLMGLVMIGGEHGSARVVQAACML 360
            I  EQELC QGK++AAYA+YF  LPADMM+VITMHKLMGL+M GG+HG+ARVVQAA ++
Sbjct: 237 KIAEEQELCSQGKSKAAYAKYFYQLPADMMAVITMHKLMGLLMTGGDHGTARVVQAALVI 296

Query: 361 GEAIEQEVRIHKFLEXXXXXXVDRDKNAGDRSEIVIQEQDKLRKKVTNLIKKQKLQAVRQ 540
           G+AIEQEVRIH FLE       ++DK   D  E V QEQ+KLRKKVTNL+KKQKL+AV Q
Sbjct: 297 GDAIEQEVRIHNFLEKTKKQKAEKDKQKED-GEHVTQEQEKLRKKVTNLMKKQKLRAVGQ 355

Query: 541 IVKGHDDLKPWGPEVRAKVGSRLIELLLQTAYIQPPADQLADGPPDIRPAFVHTSKTMVK 720
           IV+  DD KPWG + RAKVGSRLI+LLLQTAYIQPPA+QLA  PPDI PAFVH+ +T+ K
Sbjct: 356 IVRRQDDSKPWGQDARAKVGSRLIDLLLQTAYIQPPANQLAVDPPDIPPAFVHSVRTVAK 415

Query: 721 ETKKISR 741
           ETK  SR
Sbjct: 416 ETKSASR 422


>sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial; AltName:
           Full=NictaRpoT2-tom; AltName: Full=T7 bacteriophage-type
           single subunit RNA polymerase 2B; Flags: Precursor
           gi|21425665|emb|CAC95020.1| mitochondrial and
           chloroplast RNA polymerase [Nicotiana tabacum]
          Length = 1021

 Score =  353 bits (905), Expect = 5e-95
 Identities = 177/247 (71%), Positives = 205/247 (82%)
 Frame = +1

Query: 1   MGQGKYQFLRRRQVKIETEAWEQAANEYKDLLKDMCEQKLAPNLPYIKSLFLGWFEPLCN 180
           MG  KYQ L+RRQVK+ETEAWEQAA EYK+LL DMCEQKLAPNLPY+KSLFLGWFEPL +
Sbjct: 178 MGHRKYQTLKRRQVKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRD 237

Query: 181 AITAEQELCRQGKNRAAYARYFDLLPADMMSVITMHKLMGLVMIGGEHGSARVVQAACML 360
            I  EQELC QGK++AAYA+Y   LPADMM+VITMHKLMGL+M GG+HG+ARVVQAA ++
Sbjct: 238 KIAEEQELCSQGKSKAAYAKYLYQLPADMMAVITMHKLMGLLMTGGDHGTARVVQAALVI 297

Query: 361 GEAIEQEVRIHKFLEXXXXXXVDRDKNAGDRSEIVIQEQDKLRKKVTNLIKKQKLQAVRQ 540
           G+AIEQEVRIH FLE       ++DK   D  E V QEQ+KLRKKVTNL+KKQKL+AV Q
Sbjct: 298 GDAIEQEVRIHNFLEKTKKQKAEKDKQKED-GEHVTQEQEKLRKKVTNLMKKQKLRAVGQ 356

Query: 541 IVKGHDDLKPWGPEVRAKVGSRLIELLLQTAYIQPPADQLADGPPDIRPAFVHTSKTMVK 720
           IV+  DD KPWG + +AKVGSRLIELLLQTAYIQPPA+QLA  PPDIRPAF+H+ +T+ K
Sbjct: 357 IVRRQDDSKPWGQDAKAKVGSRLIELLLQTAYIQPPANQLAVDPPDIRPAFLHSVRTVAK 416

Query: 721 ETKKISR 741
           ETK  SR
Sbjct: 417 ETKSASR 423


>ref|XP_006384251.1| hypothetical protein POPTR_0004s11060g [Populus trichocarpa]
           gi|550340797|gb|ERP62048.1| hypothetical protein
           POPTR_0004s11060g [Populus trichocarpa]
          Length = 475

 Score =  349 bits (896), Expect = 5e-94
 Identities = 178/250 (71%), Positives = 200/250 (80%), Gaps = 3/250 (1%)
 Frame = +1

Query: 1   MGQGKYQFLRRRQVKIETEAWEQAANEYKDLLKDMCEQKLAPNLPYIKSLFLGWFEPLCN 180
           MG GKY+ LRRRQVKIE EAWEQAA EYK+LLKDMCE KLAPNLPY+K LFLGWFEPL +
Sbjct: 184 MGSGKYKALRRRQVKIEAEAWEQAAKEYKELLKDMCEHKLAPNLPYMKGLFLGWFEPLRD 243

Query: 181 AITAEQELCRQGKNRAAYARYFDLLPADMMSVITMHKLMGLVMIGGEHGSARVVQAACML 360
           AI  EQE  R+GK R  Y+ YFDLLPADMMSVITMHKL  +VMIGGEHG ARVV AACM+
Sbjct: 244 AIAKEQESIRRGKTRPDYSPYFDLLPADMMSVITMHKLTAMVMIGGEHGCARVVAAACMI 303

Query: 361 GEAIEQEVRIHKFLE--XXXXXXVDRDKNAGD-RSEIVIQEQDKLRKKVTNLIKKQKLQA 531
           G+AIEQE+RIH FLE         D  KN+ +  S  V+ E++KLRKKVT+LIKKQKL A
Sbjct: 304 GDAIEQEIRIHNFLEKTRKKKENADNSKNSVEGESPAVMNEEEKLRKKVTDLIKKQKLPA 363

Query: 532 VRQIVKGHDDLKPWGPEVRAKVGSRLIELLLQTAYIQPPADQLADGPPDIRPAFVHTSKT 711
           VR+IVKGHDD K W  + +AKVGSRLIELLLQTAYIQPP DQLAD PPD+RPAFVHT +T
Sbjct: 364 VRKIVKGHDDSKSWSTDAKAKVGSRLIELLLQTAYIQPPPDQLADSPPDLRPAFVHTFRT 423

Query: 712 MVKETKKISR 741
           +  E KK SR
Sbjct: 424 VSYENKKTSR 433


>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
           vinifera]
          Length = 978

 Score =  347 bits (891), Expect = 2e-93
 Identities = 174/247 (70%), Positives = 201/247 (81%)
 Frame = +1

Query: 1   MGQGKYQFLRRRQVKIETEAWEQAANEYKDLLKDMCEQKLAPNLPYIKSLFLGWFEPLCN 180
           + QGK+  LRRRQ+K+ETEAWE+AA EY++LL DMCEQKLAPNLPYIKSLFLGWFEPL +
Sbjct: 135 VAQGKHNVLRRRQIKMETEAWEEAAKEYRELLSDMCEQKLAPNLPYIKSLFLGWFEPLRD 194

Query: 181 AITAEQELCRQGKNRAAYARYFDLLPADMMSVITMHKLMGLVMIGGEHGSARVVQAACML 360
            I AEQ+LC+QGKNRAAYA YFD LPADMM+VITMHKLMGL+M G  +GSARVVQAAC +
Sbjct: 195 VIAAEQDLCKQGKNRAAYAPYFDHLPADMMAVITMHKLMGLLMTGEGNGSARVVQAACHI 254

Query: 361 GEAIEQEVRIHKFLEXXXXXXVDRDKNAGDRSEIVIQEQDKLRKKVTNLIKKQKLQAVRQ 540
           GEAIE EVRI +F+E           N    S  V +EQ+KLRKKV+ L+KKQKLQ VRQ
Sbjct: 255 GEAIEHEVRIQRFMEKTKKKSAS-SNNPDGGSNPVTKEQEKLRKKVSMLMKKQKLQQVRQ 313

Query: 541 IVKGHDDLKPWGPEVRAKVGSRLIELLLQTAYIQPPADQLADGPPDIRPAFVHTSKTMVK 720
           IVK  DD KPWG +   KVGSRLIELL++TAYIQPPADQL DGPPDIRPAFVHT KT++K
Sbjct: 314 IVKRQDDSKPWGQDANVKVGSRLIELLIETAYIQPPADQLGDGPPDIRPAFVHTLKTVIK 373

Query: 721 ETKKISR 741
           ET+K +R
Sbjct: 374 ETQKGTR 380


>ref|XP_004304185.1| PREDICTED: DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial-like [Fragaria vesca subsp.
            vesca]
          Length = 1262

 Score =  346 bits (888), Expect = 4e-93
 Identities = 174/247 (70%), Positives = 200/247 (80%)
 Frame = +1

Query: 1    MGQGKYQFLRRRQVKIETEAWEQAANEYKDLLKDMCEQKLAPNLPYIKSLFLGWFEPLCN 180
            MG+GKY  LRRRQ+KIETEAWE+AA+EY++LL DMCEQKLAPNLPY+KSLFLGWFEPLCN
Sbjct: 422  MGEGKYLMLRRRQIKIETEAWERAADEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLCN 481

Query: 181  AITAEQELCRQGKNRAAYARYFDLLPADMMSVITMHKLMGLVMIGGEHGSARVVQAACML 360
            AIT EQ+LCRQGKN+ AY  Y D LPADMM+VITMHKLMGL+M  GEHGS RVV AAC +
Sbjct: 482  AITKEQDLCRQGKNKTAYGPYMDKLPADMMAVITMHKLMGLLMT-GEHGSCRVVSAACTI 540

Query: 361  GEAIEQEVRIHKFLEXXXXXXVDRDKNAGDRSEIVIQEQDKLRKKVTNLIKKQKLQAVRQ 540
            GEAIEQEV+IH FLE      V +D+  G+ S+  ++E +KL KKVTNLI+K+KLQAVR 
Sbjct: 541  GEAIEQEVKIHNFLERTKKKKVGKDQETGE-SDAAMKENEKLNKKVTNLIEKKKLQAVRH 599

Query: 541  IVKGHDDLKPWGPEVRAKVGSRLIELLLQTAYIQPPADQLADGPPDIRPAFVHTSKTMVK 720
            IV+GHDD K W  E +AKVGSR+IELL QTA+IQPPADQL D   DIRPAFVHT KT V 
Sbjct: 600  IVRGHDDSKAWSQEAKAKVGSRMIELLTQTAFIQPPADQLGDSLVDIRPAFVHTFKT-VS 658

Query: 721  ETKKISR 741
              K  SR
Sbjct: 659  NAKNTSR 665


>ref|XP_004232127.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial-like [Solanum lycopersicum]
          Length = 1022

 Score =  341 bits (875), Expect = 1e-91
 Identities = 170/243 (69%), Positives = 198/243 (81%)
 Frame = +1

Query: 13  KYQFLRRRQVKIETEAWEQAANEYKDLLKDMCEQKLAPNLPYIKSLFLGWFEPLCNAITA 192
           KY  L RRQVKIET+AWEQAA EY++LL DMCEQKLAPNLPY+KSLFLGWFEPL + I  
Sbjct: 183 KYPALMRRQVKIETQAWEQAAKEYRELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAQ 242

Query: 193 EQELCRQGKNRAAYARYFDLLPADMMSVITMHKLMGLVMIGGEHGSARVVQAACMLGEAI 372
           EQELC QGK++AAY++YF LLPADMM+VITMHKLMGL+M GGEHG+ RVVQAA  +G+AI
Sbjct: 243 EQELCIQGKSKAAYSKYFHLLPADMMAVITMHKLMGLLMTGGEHGNVRVVQAALTIGDAI 302

Query: 373 EQEVRIHKFLEXXXXXXVDRDKNAGDRSEIVIQEQDKLRKKVTNLIKKQKLQAVRQIVKG 552
           EQEVRIHKFLE       ++D+N  D  E    EQ KL KKVT+L+KKQKL+AV QIV+ 
Sbjct: 303 EQEVRIHKFLEKTEKHKAEKDRNMED-GEHATLEQKKLHKKVTSLMKKQKLRAVNQIVRS 361

Query: 553 HDDLKPWGPEVRAKVGSRLIELLLQTAYIQPPADQLADGPPDIRPAFVHTSKTMVKETKK 732
            DD KPWG + +AKVGSRLIE LLQTAYIQ PADQLA  PPDIRPAF+H+++T+ KETK 
Sbjct: 362 QDDSKPWGQDAKAKVGSRLIEFLLQTAYIQSPADQLAVDPPDIRPAFIHSTRTLAKETKS 421

Query: 733 ISR 741
            SR
Sbjct: 422 ASR 424


>ref|XP_002533596.1| conserved hypothetical protein [Ricinus communis]
           gi|223526525|gb|EEF28787.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 395

 Score =  341 bits (875), Expect = 1e-91
 Identities = 172/241 (71%), Positives = 194/241 (80%), Gaps = 1/241 (0%)
 Frame = +1

Query: 1   MGQGKYQFLRRRQVKIETEAWEQAANEYKDLLKDMCEQKLAPNLPYIKSLFLGWFEPLCN 180
           MG  KYQ L++RQVKIETEAWE A  EYK+LL DMCE+KLAPNLPY+KSLFLGWFEP  +
Sbjct: 152 MGSKKYQMLKKRQVKIETEAWEWAVKEYKELLMDMCEKKLAPNLPYMKSLFLGWFEPFRD 211

Query: 181 AITAEQELCRQGKNRAAYARYFDLLPADMMSVITMHKLMGLVMIGGEHGSARVVQAACML 360
           AI  EQEL R GKNR A+A YFD LPADMM+VITMHKL+ LVM GGEHG ARVV AAC++
Sbjct: 212 AILKEQELIRVGKNRTAFAPYFDQLPADMMAVITMHKLVALVMTGGEHGCARVVAAACLI 271

Query: 361 GEAIEQEVRIHKFLEXXXXXXV-DRDKNAGDRSEIVIQEQDKLRKKVTNLIKKQKLQAVR 537
           G AIEQEVRIHKFLE        D  KN  D S   ++EQ+KLRKKVT+LIKKQKL AVR
Sbjct: 272 GAAIEQEVRIHKFLEKTKKRNSNDSKKNEEDESNGAVKEQEKLRKKVTDLIKKQKLPAVR 331

Query: 538 QIVKGHDDLKPWGPEVRAKVGSRLIELLLQTAYIQPPADQLADGPPDIRPAFVHTSKTMV 717
           QIVKGHDD + W  + +AKVGSRLIELL+QTAYIQPPADQLADGPPDIRPAF HT + + 
Sbjct: 332 QIVKGHDDSQSWTQDTKAKVGSRLIELLIQTAYIQPPADQLADGPPDIRPAFAHTFRNVT 391

Query: 718 K 720
           +
Sbjct: 392 Q 392


>ref|XP_006338320.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial-like [Solanum tuberosum]
          Length = 1019

 Score =  338 bits (868), Expect = 9e-91
 Identities = 169/243 (69%), Positives = 198/243 (81%)
 Frame = +1

Query: 13  KYQFLRRRQVKIETEAWEQAANEYKDLLKDMCEQKLAPNLPYIKSLFLGWFEPLCNAITA 192
           KY  L+RRQVKIET+AWE AA EY++LL DMCEQKLAPNLPY+KSLFLGWFEPL + I  
Sbjct: 180 KYPALKRRQVKIETQAWELAAKEYRELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAQ 239

Query: 193 EQELCRQGKNRAAYARYFDLLPADMMSVITMHKLMGLVMIGGEHGSARVVQAACMLGEAI 372
           EQELC QGK++AAY++YF LLPADMM+VITMHKLMGL+M GGEHG+ARVVQAA  +G+AI
Sbjct: 240 EQELCIQGKSKAAYSKYFHLLPADMMAVITMHKLMGLLMTGGEHGNARVVQAALTIGDAI 299

Query: 373 EQEVRIHKFLEXXXXXXVDRDKNAGDRSEIVIQEQDKLRKKVTNLIKKQKLQAVRQIVKG 552
           EQEVRIHKFLE       ++D+   D  E    EQ KL KKVT+L+KKQKL+AV QIV+ 
Sbjct: 300 EQEVRIHKFLEKTEKHKAEKDRKMED-GEHATLEQKKLHKKVTSLMKKQKLRAVNQIVRS 358

Query: 553 HDDLKPWGPEVRAKVGSRLIELLLQTAYIQPPADQLADGPPDIRPAFVHTSKTMVKETKK 732
            DD KPWG + +AKVGSRLIE LLQTAYIQ PADQLA  PPDIRPAF+H+++T+ KETK 
Sbjct: 359 QDDSKPWGQDAKAKVGSRLIEFLLQTAYIQSPADQLAVDPPDIRPAFIHSTRTVAKETKS 418

Query: 733 ISR 741
            SR
Sbjct: 419 ASR 421


>gb|EYU39350.1| hypothetical protein MIMGU_mgv1a000681mg [Mimulus guttatus]
          Length = 1021

 Score =  334 bits (856), Expect = 2e-89
 Identities = 170/248 (68%), Positives = 201/248 (81%), Gaps = 1/248 (0%)
 Frame = +1

Query: 1   MGQGKYQFLRRRQVKIETEAWEQAANEYKDLLKDMCEQKLAPNLPYIKSLFLGWFEPLCN 180
           MG  K++ LRRRQVKIETEAWEQAA EY++LL DMCEQKLAPNLPY+KSLFLGWFEPL N
Sbjct: 177 MGNEKFKALRRRQVKIETEAWEQAAKEYRELLNDMCEQKLAPNLPYMKSLFLGWFEPLRN 236

Query: 181 AITAEQELCRQGKNRAAYARYFDLLPADMMSVITMHKLMGLVMIGGEHGSARVVQAACML 360
            I  EQE  R+GK++A+YA YFDLLPADMM+VITMHKLM L+M  GEHG ARVV AAC++
Sbjct: 237 KIEEEQEFIRKGKSKASYANYFDLLPADMMAVITMHKLMALLMT-GEHGCARVVAAACVI 295

Query: 361 GEAIEQEVRIHKFLEXXXXXXVDRD-KNAGDRSEIVIQEQDKLRKKVTNLIKKQKLQAVR 537
           G+AIEQEVRIH FLE      V +D +  GD+ +  IQEQ KLR+KVTNL+KKQKL+AVR
Sbjct: 296 GDAIEQEVRIHYFLEKTKKKKVTKDAETEGDKPDENIQEQAKLREKVTNLMKKQKLRAVR 355

Query: 538 QIVKGHDDLKPWGPEVRAKVGSRLIELLLQTAYIQPPADQLADGPPDIRPAFVHTSKTMV 717
           QIV    + + WG + +AKVGSRLIEL++QTAYIQPPA Q A+GPPDI+PAF+HT KT+ 
Sbjct: 356 QIVNRQIESQAWGQDAKAKVGSRLIELIIQTAYIQPPASQSAEGPPDIKPAFLHTFKTVA 415

Query: 718 KETKKISR 741
           KE K  SR
Sbjct: 416 KEIKSNSR 423


>gb|EYU28900.1| hypothetical protein MIMGU_mgv1a000798mg [Mimulus guttatus]
          Length = 983

 Score =  328 bits (841), Expect = 1e-87
 Identities = 170/248 (68%), Positives = 196/248 (79%), Gaps = 1/248 (0%)
 Frame = +1

Query: 1   MGQGKYQFLRRRQVKIETEAWEQAANEYKDLLKDMCEQKLAPNLPYIKSLFLGWFEPLCN 180
           MG GKY  LRRRQ+KIETEAWE AA EY++LL+DMCEQKLAPNLPYIKSLFLGWFEPL +
Sbjct: 142 MGLGKYNSLRRRQIKIETEAWENAAKEYQELLEDMCEQKLAPNLPYIKSLFLGWFEPLRD 201

Query: 181 AITAEQELCRQGKNRAAYARYFDLLPADMMSVITMHKLMGLVMIGGEHGSARVVQAACML 360
           AI AEQ+LC++GKNR AYA YFD LPA+MM+VITMHKLMGL+M GG +GSARVVQAAC +
Sbjct: 202 AIAAEQDLCKEGKNRGAYAPYFDQLPAEMMAVITMHKLMGLLMTGGGNGSARVVQAACHI 261

Query: 361 GEAIEQEVRIHKFLE-XXXXXXVDRDKNAGDRSEIVIQEQDKLRKKVTNLIKKQKLQAVR 537
           GEAIE EVRIHKFL+       ++R    G   E   +EQD+LRKKV  L+KKQK+Q VR
Sbjct: 262 GEAIEHEVRIHKFLDNCKRKNALNRTSEEGPDPE--AKEQDRLRKKVKILMKKQKVQQVR 319

Query: 538 QIVKGHDDLKPWGPEVRAKVGSRLIELLLQTAYIQPPADQLADGPPDIRPAFVHTSKTMV 717
            IV+  DDLKPWG + + KVG RLI++L QTAYIQPP DQ  DG PDIRPAFVHT K + 
Sbjct: 320 NIVRHQDDLKPWGQDAQVKVGCRLIQILTQTAYIQPPVDQRDDGAPDIRPAFVHTLKCV- 378

Query: 718 KETKKISR 741
            ET K SR
Sbjct: 379 -ETLKGSR 385


>ref|XP_004141596.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 984

 Score =  328 bits (840), Expect = 2e-87
 Identities = 167/242 (69%), Positives = 193/242 (79%), Gaps = 1/242 (0%)
 Frame = +1

Query: 1   MGQGKYQFLRRRQVKIETEAWEQAANEYKDLLKDMCEQKLAPNLPYIKSLFLGWFEPLCN 180
           MGQ KY  LRRRQV IE EAWE AA EY++LL DMC+QKLAPNLPY+KSLFLGWFEP  +
Sbjct: 139 MGQWKYNMLRRRQVTIEAEAWENAAKEYRELLVDMCKQKLAPNLPYVKSLFLGWFEPFQD 198

Query: 181 AITAEQELCRQGK-NRAAYARYFDLLPADMMSVITMHKLMGLVMIGGEHGSARVVQAACM 357
           AI  EQEL ++GK +RA YA YF  LPAD MSVITMHKLMGL+M G EHGS RVVQAAC 
Sbjct: 199 AIIKEQELIQEGKRSRAPYAPYFLQLPADKMSVITMHKLMGLLMRGSEHGSVRVVQAACA 258

Query: 358 LGEAIEQEVRIHKFLEXXXXXXVDRDKNAGDRSEIVIQEQDKLRKKVTNLIKKQKLQAVR 537
           +G+AIEQEVRIHKFLE       ++D    D+ +I  +EQ++LRKKVTNLIKK+K  A  
Sbjct: 259 IGDAIEQEVRIHKFLEKKKERTHNKDNENNDQPDIERKEQERLRKKVTNLIKKKKHLAAG 318

Query: 538 QIVKGHDDLKPWGPEVRAKVGSRLIELLLQTAYIQPPADQLADGPPDIRPAFVHTSKTMV 717
           QI K  DD +PWG E++AKVG+RLIELL+QTAYIQPPADQLADGPPD RPAFVH+ KT V
Sbjct: 319 QIAKRADDSRPWGRELKAKVGARLIELLIQTAYIQPPADQLADGPPDPRPAFVHSLKTSV 378

Query: 718 KE 723
           K+
Sbjct: 379 KD 380


>ref|XP_006602976.1| PREDICTED: DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial-like isoform X1 [Glycine
           max]
          Length = 1046

 Score =  325 bits (832), Expect = 1e-86
 Identities = 169/251 (67%), Positives = 195/251 (77%), Gaps = 4/251 (1%)
 Frame = +1

Query: 1   MGQGKYQFLRRRQVKIETEAWEQAANEYKDLLKDMCEQKLAPNLPYIKSLFLGWFEPLCN 180
           +GQ +YQ LRRRQVKIETE WE+AA EY++LL DMCE KLAPNLPY+KSLFLGWFEPL +
Sbjct: 198 VGQSRYQELRRRQVKIETEMWEEAAKEYRELLMDMCEHKLAPNLPYMKSLFLGWFEPLRD 257

Query: 181 AITAEQELCRQGKNRAAYARYFDLLPADMMSVITMHKLMGLVMIGGEH---GSARVVQAA 351
           AI  EQE+  +GKNR AYA YF  LPAD M+VI MHKLMGL+M G E    G+ARVVQAA
Sbjct: 258 AIVKEQEMYSEGKNRMAYAPYFVQLPADKMAVIAMHKLMGLLMTGNERVTIGTARVVQAA 317

Query: 352 CMLGEAIEQEVRIHKFLEXXXXXXVDR-DKNAGDRSEIVIQEQDKLRKKVTNLIKKQKLQ 528
           C +G+AIE EVRIHKFLE       DR +KN    S   I+E+ KLRKKV +L+KKQKL 
Sbjct: 318 CGIGDAIENEVRIHKFLEKTKKKKGDRSNKNKAGESVADIKEEQKLRKKVIDLMKKQKLV 377

Query: 529 AVRQIVKGHDDLKPWGPEVRAKVGSRLIELLLQTAYIQPPADQLADGPPDIRPAFVHTSK 708
           AVR +VKG DD KPWG  ++ KVGSRLIELLLQTAYIQPP+DQL D  PDIRPAFVH+ K
Sbjct: 378 AVRGLVKGKDDTKPWGAVIKTKVGSRLIELLLQTAYIQPPSDQLPDAAPDIRPAFVHSFK 437

Query: 709 TMVKETKKISR 741
           T+ KE+ K SR
Sbjct: 438 TVTKESIKASR 448