BLASTX nr result
ID: Paeonia22_contig00029646
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia22_contig00029646
(954 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275085.1| PREDICTED: pentatricopeptide repeat-containi... 437 e-120
ref|XP_006471681.1| PREDICTED: pentatricopeptide repeat-containi... 426 e-117
ref|XP_006432926.1| hypothetical protein CICLE_v10000494mg [Citr... 426 e-117
ref|XP_002531291.1| pentatricopeptide repeat-containing protein,... 419 e-115
ref|XP_006382794.1| hypothetical protein POPTR_0005s05510g [Popu... 416 e-114
ref|XP_007208317.1| hypothetical protein PRUPE_ppa002960mg [Prun... 403 e-110
ref|XP_004304748.1| PREDICTED: pentatricopeptide repeat-containi... 394 e-107
ref|XP_004171232.1| PREDICTED: pentatricopeptide repeat-containi... 389 e-106
ref|XP_004139380.1| PREDICTED: pentatricopeptide repeat-containi... 389 e-106
ref|XP_006408155.1| hypothetical protein EUTSA_v10020244mg [Eutr... 371 e-100
ref|XP_006299672.1| hypothetical protein CARUB_v10015860mg [Caps... 366 8e-99
ref|NP_187126.1| pentatricopeptide repeat-containing protein [Ar... 364 3e-98
ref|XP_002884467.1| pentatricopeptide repeat-containing protein ... 363 4e-98
ref|XP_006838873.1| hypothetical protein AMTR_s00002p00267090 [A... 342 2e-91
gb|EAZ28544.1| hypothetical protein OsJ_12524 [Oryza sativa Japo... 325 2e-86
gb|AAP12991.1| hypothetical protein [Oryza sativa Japonica Group... 325 2e-86
ref|XP_003559839.1| PREDICTED: pentatricopeptide repeat-containi... 325 2e-86
ref|XP_006651805.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 322 2e-85
ref|XP_002466476.1| hypothetical protein SORBIDRAFT_01g008465 [S... 314 4e-83
tpg|DAA51276.1| TPA: methyltransferase small domain protein [Zea... 312 1e-82
>ref|XP_002275085.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Vitis vinifera]
Length = 654
Score = 437 bits (1123), Expect = e-120
Identities = 208/317 (65%), Positives = 260/317 (82%)
Frame = +3
Query: 3 LQNSLLKMYLEHEELGPAHKLFEQMPTLDAVSFNIMIAGYAKMGCSLEVSKLFHKMVGIG 182
LQN+L+K+YLE+E++G A+++F+QM DAVSFNIMI GYAK G ++E K H+MVG+G
Sbjct: 164 LQNTLMKIYLENEKMGLAYQVFQQMAAPDAVSFNIMIFGYAKKGHNIEALKFLHEMVGLG 223
Query: 183 FEPDEFTMLGLLMCCGRIEDARLGKSVHAWMERRALINDSNLILGNALLDMYVKCKELEI 362
+PDEFTMLGLL+CCGR+ DA+LGKSVHAW+ERR LI SNLIL NALLDMYVKCKEL I
Sbjct: 224 LKPDEFTMLGLLICCGRLGDAQLGKSVHAWIERRGLIKSSNLILNNALLDMYVKCKELRI 283
Query: 363 THRVFNKFMKKDVITWNTMIAGYAKVGELELACSLFFQMPNRDLVSWNSLIAGYAQRDDY 542
+FN ++KD I+WNTMIAGYAKVG LE+A + F MP RDLVSWNS+IAGYAQ+ D
Sbjct: 284 AQSIFNVIVRKDTISWNTMIAGYAKVGNLEIAHNFFEDMPCRDLVSWNSIIAGYAQKGDC 343
Query: 543 ITVRSLFSDMIRDDINPDSVTMVNLVSAAAEIGALDEGRWVHGWLVRKKMEVGPFLGSAL 722
+ V+ LF +M+ ++I PD VT++NLVSAAAEIGAL GRW+HGW+VR +M++ FLGSA
Sbjct: 344 LMVQRLFENMVAENIWPDFVTIINLVSAAAEIGALHHGRWIHGWVVRMQMKIDAFLGSAF 403
Query: 723 VDMYCKCGSVEKAFTVFQGVIKKDVTLWTTMISGLAYHGYGGHALELFSKMQKDVMPNAV 902
+DMY KCGS+++A VF+ V +KDVT+WTTMI+G A+HGYG AL+LF +MQ+ VMPN V
Sbjct: 404 IDMYWKCGSIKRACMVFREVTEKDVTVWTTMITGFAFHGYGSKALQLFYEMQEYVMPNQV 463
Query: 903 TFVAVLTACSHSGLVDQ 953
TFVAVLTACSHSG V Q
Sbjct: 464 TFVAVLTACSHSGFVSQ 480
>ref|XP_006471681.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Citrus sinensis]
Length = 655
Score = 426 bits (1094), Expect = e-117
Identities = 197/317 (62%), Positives = 254/317 (80%)
Frame = +3
Query: 3 LQNSLLKMYLEHEELGPAHKLFEQMPTLDAVSFNIMIAGYAKMGCSLEVSKLFHKMVGIG 182
LQNSL+K+Y+E+ ++ A KLF + D SFNIMI GYAK GC+LE +LF+KM+ G
Sbjct: 164 LQNSLMKIYIENGQIRLAEKLFLCKQSPDVASFNIMIVGYAKKGCTLEAIRLFYKMMNSG 223
Query: 183 FEPDEFTMLGLLMCCGRIEDARLGKSVHAWMERRALINDSNLILGNALLDMYVKCKELEI 362
EPDEFT LGLL+CCG++ D +LGKSVHAWMERR ++ SN+ILGNALLDMYVKCKEL++
Sbjct: 224 LEPDEFTALGLLVCCGQLADVQLGKSVHAWMERRKKVSSSNMILGNALLDMYVKCKELQL 283
Query: 363 THRVFNKFMKKDVITWNTMIAGYAKVGELELACSLFFQMPNRDLVSWNSLIAGYAQRDDY 542
R F+ KD ++WNT+++G AKVG+LE AC+LF MPNRD++SWNSLIAGYAQ DY
Sbjct: 284 ARRTFDALEVKDAVSWNTIMSGLAKVGQLEYACTLFNHMPNRDIISWNSLIAGYAQNGDY 343
Query: 543 ITVRSLFSDMIRDDINPDSVTMVNLVSAAAEIGALDEGRWVHGWLVRKKMEVGPFLGSAL 722
+ +R LF +MI D + PD++T++NLVSAAAE+GA+D+GRW+HG +VR + FLGS L
Sbjct: 344 VMMRELFINMILDHVKPDNITLINLVSAAAEVGAIDQGRWIHGVVVRMGTMMDEFLGSVL 403
Query: 723 VDMYCKCGSVEKAFTVFQGVIKKDVTLWTTMISGLAYHGYGGHALELFSKMQKDVMPNAV 902
+DMYCKCGS+E+A TVF+ V +KDVT+WTTMI+GLA+HG+G ALELFS+M +V PN V
Sbjct: 404 IDMYCKCGSIERALTVFREVREKDVTVWTTMITGLAFHGHGRKALELFSEMHGEVTPNGV 463
Query: 903 TFVAVLTACSHSGLVDQ 953
TFVAVLT CSH G+VD+
Sbjct: 464 TFVAVLTVCSHCGIVDE 480
>ref|XP_006432926.1| hypothetical protein CICLE_v10000494mg [Citrus clementina]
gi|557535048|gb|ESR46166.1| hypothetical protein
CICLE_v10000494mg [Citrus clementina]
Length = 681
Score = 426 bits (1094), Expect = e-117
Identities = 197/317 (62%), Positives = 254/317 (80%)
Frame = +3
Query: 3 LQNSLLKMYLEHEELGPAHKLFEQMPTLDAVSFNIMIAGYAKMGCSLEVSKLFHKMVGIG 182
LQNSL+K+Y+E+ ++ A KLF + D SFNIMI GYAK GC+LE +LF+KM+ G
Sbjct: 164 LQNSLMKIYIENGQIRLAEKLFLCKQSPDVASFNIMIVGYAKKGCTLEAIRLFYKMMNSG 223
Query: 183 FEPDEFTMLGLLMCCGRIEDARLGKSVHAWMERRALINDSNLILGNALLDMYVKCKELEI 362
EPDEFT LGLL+CCG++ D +LGKSVHAWMERR ++ SN+ILGNALLDMYVKCKEL++
Sbjct: 224 LEPDEFTALGLLVCCGQLADVQLGKSVHAWMERRKKVSSSNMILGNALLDMYVKCKELQL 283
Query: 363 THRVFNKFMKKDVITWNTMIAGYAKVGELELACSLFFQMPNRDLVSWNSLIAGYAQRDDY 542
R F+ KD ++WNT+++G AKVG+LE AC+LF MPNRD++SWNSLIAGYAQ DY
Sbjct: 284 ARRTFDALEVKDAVSWNTIMSGLAKVGQLEYACTLFNHMPNRDIISWNSLIAGYAQNGDY 343
Query: 543 ITVRSLFSDMIRDDINPDSVTMVNLVSAAAEIGALDEGRWVHGWLVRKKMEVGPFLGSAL 722
+ +R LF +MI D + PD++T++NLVSAAAE+GA+D+GRW+HG +VR + FLGS L
Sbjct: 344 VMMRELFINMILDHVKPDNITLINLVSAAAEVGAIDQGRWIHGVVVRMGTMMDEFLGSVL 403
Query: 723 VDMYCKCGSVEKAFTVFQGVIKKDVTLWTTMISGLAYHGYGGHALELFSKMQKDVMPNAV 902
+DMYCKCGS+E+A TVF+ V +KDVT+WTTMI+GLA+HG+G ALELFS+M +V PN V
Sbjct: 404 IDMYCKCGSIERALTVFREVREKDVTVWTTMITGLAFHGHGRKALELFSEMHGEVTPNGV 463
Query: 903 TFVAVLTACSHSGLVDQ 953
TFVAVLT CSH G+VD+
Sbjct: 464 TFVAVLTVCSHCGIVDE 480
>ref|XP_002531291.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223529124|gb|EEF31104.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 517
Score = 419 bits (1077), Expect = e-115
Identities = 197/317 (62%), Positives = 249/317 (78%)
Frame = +3
Query: 3 LQNSLLKMYLEHEELGPAHKLFEQMPTLDAVSFNIMIAGYAKMGCSLEVSKLFHKMVGIG 182
LQNSL+K+YLE+ AHK+F QMP D VSFNIMI G AK GC LE +L + M+ +
Sbjct: 162 LQNSLIKVYLENGLFCLAHKIFRQMPAPDVVSFNIMITGCAKQGCGLEAIQLLYDMMALD 221
Query: 183 FEPDEFTMLGLLMCCGRIEDARLGKSVHAWMERRALINDSNLILGNALLDMYVKCKELEI 362
+PDEFTMLGLL+ CG++ +AR GK+VHAW+ERR I SNLILGNALLDMYVKC+EL++
Sbjct: 222 LKPDEFTMLGLLVSCGKLGEARFGKTVHAWIERRKSITSSNLILGNALLDMYVKCQELDL 281
Query: 363 THRVFNKFMKKDVITWNTMIAGYAKVGELELACSLFFQMPNRDLVSWNSLIAGYAQRDDY 542
HR F+ +KDV++WNT+IAG AK G+LELA +LF QMP RD VSWNSLIA YA R D+
Sbjct: 282 AHRTFSALTEKDVVSWNTIIAGCAKAGDLELARTLFDQMPCRDFVSWNSLIAEYANRGDF 341
Query: 543 ITVRSLFSDMIRDDINPDSVTMVNLVSAAAEIGALDEGRWVHGWLVRKKMEVGPFLGSAL 722
I VR L DM+ +++ P++ TM +L+SAAAEIGALD+GRW HGW++R ++++ LGSAL
Sbjct: 342 IIVRDLLYDMVAENVVPNNTTMASLISAAAEIGALDQGRWAHGWVIRMQIKIDAVLGSAL 401
Query: 723 VDMYCKCGSVEKAFTVFQGVIKKDVTLWTTMISGLAYHGYGGHALELFSKMQKDVMPNAV 902
+DMYCKCGS+ AF +F +I+KDV LWTTMI+G A+HGYG ALELF +MQ +V PN +
Sbjct: 402 IDMYCKCGSINNAFLIFNEIIEKDVILWTTMITGFAFHGYGSKALELFYEMQANVTPNEI 461
Query: 903 TFVAVLTACSHSGLVDQ 953
TFV+VL ACSHSGLVDQ
Sbjct: 462 TFVSVLAACSHSGLVDQ 478
>ref|XP_006382794.1| hypothetical protein POPTR_0005s05510g [Populus trichocarpa]
gi|550338164|gb|ERP60591.1| hypothetical protein
POPTR_0005s05510g [Populus trichocarpa]
Length = 648
Score = 416 bits (1070), Expect = e-114
Identities = 193/317 (60%), Positives = 255/317 (80%)
Frame = +3
Query: 3 LQNSLLKMYLEHEELGPAHKLFEQMPTLDAVSFNIMIAGYAKMGCSLEVSKLFHKMVGIG 182
LQN+L+K+YLE+ + AH++FE+MP+ D VSFN+MI GYAK G LE +LFH+MVG+G
Sbjct: 168 LQNTLIKVYLENGLVRLAHQVFEKMPSPDIVSFNVMIVGYAKKGFGLEAMRLFHEMVGLG 227
Query: 183 FEPDEFTMLGLLMCCGRIEDARLGKSVHAWMERRALINDSNLILGNALLDMYVKCKELEI 362
EPDEFT+LGLL+ CG++ + + GK+VH WMERR SNLILGNALLDMYVKC+++E+
Sbjct: 228 LEPDEFTILGLLVSCGQLGNVKFGKAVHGWMERRKPTISSNLILGNALLDMYVKCQKVEL 287
Query: 363 THRVFNKFMKKDVITWNTMIAGYAKVGELELACSLFFQMPNRDLVSWNSLIAGYAQRDDY 542
R F +KD+++WN ++AG AKVGE E A F+QMP RD+VSWNSL+ GYA R D+
Sbjct: 288 ALRTFGALKEKDIVSWNMIVAGCAKVGEFEQARLFFYQMPCRDIVSWNSLVTGYACRGDF 347
Query: 543 ITVRSLFSDMIRDDINPDSVTMVNLVSAAAEIGALDEGRWVHGWLVRKKMEVGPFLGSAL 722
+V+ L DM+ + + PD+VTM++LVSAA E GALD+GRW HGW++R ++++ FLGSAL
Sbjct: 348 ASVKELIVDMVMEKVIPDTVTMISLVSAATESGALDQGRWAHGWVIRMQIKLDAFLGSAL 407
Query: 723 VDMYCKCGSVEKAFTVFQGVIKKDVTLWTTMISGLAYHGYGGHALELFSKMQKDVMPNAV 902
+DMYCKCGS+E+A VF+ + KKDVT+WTTMI+GLA+HGYG ALELFS+MQ+DV P+ V
Sbjct: 408 IDMYCKCGSIERASRVFKEINKKDVTVWTTMITGLAFHGYGSKALELFSEMQEDVSPDDV 467
Query: 903 TFVAVLTACSHSGLVDQ 953
TFV+VL+ACSHSGLVDQ
Sbjct: 468 TFVSVLSACSHSGLVDQ 484
Score = 97.4 bits (241), Expect = 7e-18
Identities = 74/267 (27%), Positives = 117/267 (43%), Gaps = 1/267 (0%)
Frame = +3
Query: 42 ELGPAHKLFEQMPTLDAVSFNIMIAGYAKMGCSLEVSKLFHKMVGIGFEPDEFTMLGLLM 221
E A F QMP D VS+N ++ GYA G V +L MV PD TM+ L+
Sbjct: 315 EFEQARLFFYQMPCRDIVSWNSLVTGYACRGDFASVKELIVDMVMEKVIPDTVTMISLVS 374
Query: 222 CCGRIEDARLGKSVHAWMERRALINDSNLILGNALLDMYVKCKELEITHRVFNKFMKKDV 401
G+ H W+ R + D+ LG+AL+DMY KC
Sbjct: 375 AATESGALDQGRWAHGWVIRMQIKLDA--FLGSALIDMYCKC------------------ 414
Query: 402 ITWNTMIAGYAKVGELELACSLFFQMPNRDLVSWNSLIAGYAQRDDYITVRSLFSDMIRD 581
G +E A +F ++ +D+ W ++I G A LFS+M ++
Sbjct: 415 -------------GSIERASRVFKEINKKDVTVWTTMITGLAFHGYGSKALELFSEM-QE 460
Query: 582 DINPDSVTMVNLVSAAAEIGALDEGRWVHGWLVRKKMEVGPFLGSALVDMYCKCGSVEKA 761
D++PD VT V+++SA + G +D+G V + +E G LVD+ + G + +A
Sbjct: 461 DVSPDDVTFVSVLSACSHSGLVDQGIKVFSSMTDYGIEPGVEHYGCLVDLLARSGRLSEA 520
Query: 762 FTVF-QGVIKKDVTLWTTMISGLAYHG 839
+ Q +K ++W M++ G
Sbjct: 521 KDIIDQMPMKPSRSIWGAMLNACQAQG 547
Score = 58.2 bits (139), Expect = 5e-06
Identities = 52/224 (23%), Positives = 102/224 (45%), Gaps = 9/224 (4%)
Frame = +3
Query: 303 NLILGNALLDMYVKCKELEITHRVFNKFMKKDVITWNTM-------IAGYAKVGELELAC 461
+L L + L + KCK + ++ + M+ + T + + L+LA
Sbjct: 29 SLDLNHPSLVLLEKCKTRDHFKQILCRIMRSSKLIGKTFPMSRFIYFSAVSHPDNLDLAI 88
Query: 462 SLFFQM-PNRDLVSWNSLIAGYAQRDDYITVRSLFSDMIRDDINPDSVTMVNLVSAAAEI 638
+LF PN +L +N+LI+ ++ I L++ ++ PD T++ L+ A +
Sbjct: 89 TLFNHFTPNPNLFIYNTLISAFSSLKK-IESFYLYNVLLSSGECPDKQTLLYLLQA---V 144
Query: 639 GALDEGRWVHGWLVRKKMEVGPFLGSALVDMYCKCGSVEKAFTVFQGVIKKDVTLWTTMI 818
+ + + +H + + +L + L+ +Y + G V A VF+ + D+ + MI
Sbjct: 145 NFISQVKQIHCQAIVTGLFSFGYLQNTLIKVYLENGLVRLAHQVFEKMPSPDIVSFNVMI 204
Query: 819 SGLAYHGYGGHALELFSKM-QKDVMPNAVTFVAVLTACSHSGLV 947
G A G+G A+ LF +M + P+ T + +L +C G V
Sbjct: 205 VGYAKKGFGLEAMRLFHEMVGLGLEPDEFTILGLLVSCGQLGNV 248
>ref|XP_007208317.1| hypothetical protein PRUPE_ppa002960mg [Prunus persica]
gi|462403959|gb|EMJ09516.1| hypothetical protein
PRUPE_ppa002960mg [Prunus persica]
Length = 617
Score = 403 bits (1036), Expect = e-110
Identities = 193/317 (60%), Positives = 255/317 (80%)
Frame = +3
Query: 3 LQNSLLKMYLEHEELGPAHKLFEQMPTLDAVSFNIMIAGYAKMGCSLEVSKLFHKMVGIG 182
LQN+L K+Y+E ++G A ++F +PT D V FNIMI GYAKMG E +LF++MVG+G
Sbjct: 164 LQNTLTKIYMEEGQMGLACQVFRDVPTPDPVLFNIMIVGYAKMGYCSEALQLFYEMVGLG 223
Query: 183 FEPDEFTMLGLLMCCGRIEDARLGKSVHAWMERRALINDSNLILGNALLDMYVKCKELEI 362
+PDEFT+LGLL+ CG + D+RLG SVHAW+ERR I SNLILGNALL+MYVK +LE+
Sbjct: 224 LKPDEFTILGLLISCGLLGDSRLGMSVHAWIERRT-ITSSNLILGNALLNMYVKWNKLEL 282
Query: 363 THRVFNKFMKKDVITWNTMIAGYAKVGELELACSLFFQMPNRDLVSWNSLIAGYAQRDDY 542
+FN + KD+++WNTM AGYAKVG+LELA + F QMP RDLVSWNSLIAGYA++ DY
Sbjct: 283 AQSIFNALVDKDIVSWNTMTAGYAKVGKLELARTYFKQMPRRDLVSWNSLIAGYAKKGDY 342
Query: 543 ITVRSLFSDMIRDDINPDSVTMVNLVSAAAEIGALDEGRWVHGWLVRKKMEVGPFLGSAL 722
+F++MIR ++ PD++T+VNLVSAAAEIGALD+G+ +HG +VR ++++ FLGSAL
Sbjct: 343 TMAVKVFNNMIRVNVRPDNITLVNLVSAAAEIGALDQGKRIHGLIVRLQLKIDVFLGSAL 402
Query: 723 VDMYCKCGSVEKAFTVFQGVIKKDVTLWTTMISGLAYHGYGGHALELFSKMQKDVMPNAV 902
+DMYCK GS+E+AF VF+G+ +KDVT+WTTMI+G +HG G +L+LFS+MQ+ ++PN V
Sbjct: 403 IDMYCKAGSIERAFMVFRGLTEKDVTIWTTMITGFGFHGDGNKSLDLFSEMQRVLLPNGV 462
Query: 903 TFVAVLTACSHSGLVDQ 953
T VAVLTACSHSGLVD+
Sbjct: 463 TLVAVLTACSHSGLVDE 479
>ref|XP_004304748.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 670
Score = 394 bits (1013), Expect = e-107
Identities = 189/317 (59%), Positives = 250/317 (78%)
Frame = +3
Query: 3 LQNSLLKMYLEHEELGPAHKLFEQMPTLDAVSFNIMIAGYAKMGCSLEVSKLFHKMVGIG 182
LQNSL+KMY+E ++ +H +F +PT D VSFNIMI GYA+ E +LF+KM+ +G
Sbjct: 183 LQNSLIKMYMEKGQMELSHLVFHHLPTPDRVSFNIMIVGYARKEYFSEALQLFYKMMDLG 242
Query: 183 FEPDEFTMLGLLMCCGRIEDARLGKSVHAWMERRALINDSNLILGNALLDMYVKCKELEI 362
+PD+FT+LGLLM CG I DARLG SVHAW+ERR I SNLIL NALLDMYVK +LE
Sbjct: 243 LKPDDFTILGLLMSCGGIGDARLGMSVHAWIERRETIT-SNLILVNALLDMYVKFNKLET 301
Query: 363 THRVFNKFMKKDVITWNTMIAGYAKVGELELACSLFFQMPNRDLVSWNSLIAGYAQRDDY 542
+FN +KD+++WNTM AGYAKVG LELA + F QMP RDLVSWNSLI+GYA+R +Y
Sbjct: 302 AQNIFNALEEKDIVSWNTMTAGYAKVGNLELAHNFFKQMPRRDLVSWNSLISGYAKRGEY 361
Query: 543 ITVRSLFSDMIRDDINPDSVTMVNLVSAAAEIGALDEGRWVHGWLVRKKMEVGPFLGSAL 722
V +F +M+ +++ PD++T+VNLVSAAAEIGALD+G+W+HG ++R +M++ FLGSAL
Sbjct: 362 DMVIKVFHNMVTENVRPDNITLVNLVSAAAEIGALDKGKWMHGLILRMQMKIDAFLGSAL 421
Query: 723 VDMYCKCGSVEKAFTVFQGVIKKDVTLWTTMISGLAYHGYGGHALELFSKMQKDVMPNAV 902
+DMYCK GS+E+AF VF+ + +KDVT+WTT+I+G A+HG+G L+LFS+MQ+ ++PN V
Sbjct: 422 IDMYCKAGSLERAFLVFRELTEKDVTVWTTLITGFAFHGHGRKGLDLFSEMQRFLLPNGV 481
Query: 903 TFVAVLTACSHSGLVDQ 953
T VAVLT CSHSGLV++
Sbjct: 482 TIVAVLTGCSHSGLVEE 498
Score = 111 bits (277), Expect = 5e-22
Identities = 82/280 (29%), Positives = 133/280 (47%), Gaps = 3/280 (1%)
Frame = +3
Query: 9 NSLLKMYLEHEELGPAHKLFEQMPTLDAVSFNIMIAGYAKMGCSLEVSKLFHKMVGIGFE 188
N++ Y + L AH F+QMP D VS+N +I+GYAK G V K+FH MV
Sbjct: 318 NTMTAGYAKVGNLELAHNFFKQMPRRDLVSWNSLISGYAKRGEYDMVIKVFHNMVTENVR 377
Query: 189 PDEFTMLGLLMCCGRIEDARLGKSVHAWMERRALINDSNLILGNALLDMYVKCKELEITH 368
PD T++ L+ I GK +H + R + D+ LG+AL+DMY
Sbjct: 378 PDNITLVNLVSAAAEIGALDKGKWMHGLILRMQMKIDA--FLGSALIDMY---------- 425
Query: 369 RVFNKFMKKDVITWNTMIAGYAKVGELELACSLFFQMPNRDLVSWNSLIAGYAQRDDYIT 548
K G LE A +F ++ +D+ W +LI G+A
Sbjct: 426 ---------------------CKAGSLERAFLVFRELTEKDVTVWTTLITGFAFHGHGRK 464
Query: 549 VRSLFSDMIRDDINPDSVTMVNLVSAAAEIGALDEGRWVHGWLVRKKMEVGPFLG--SAL 722
LFS+M R + P+ VT+V +++ + G ++EG + + +KK ++ P + L
Sbjct: 465 GLDLFSEMQRF-LLPNGVTIVAVLTGCSHSGLVEEGLSIFNSM-KKKFDIDPGIEHYGCL 522
Query: 723 VDMYCKCGSVEKAFTVFQGV-IKKDVTLWTTMISGLAYHG 839
VD++C+ G + +A V + + I+ ++W M+S HG
Sbjct: 523 VDLFCRSGRLVEAKDVIENMPIQPSRSIWGAMLSACRVHG 562
>ref|XP_004171232.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 389 bits (999), Expect = e-106
Identities = 186/317 (58%), Positives = 245/317 (77%)
Frame = +3
Query: 3 LQNSLLKMYLEHEELGPAHKLFEQMPTLDAVSFNIMIAGYAKMGCSLEVSKLFHKMVGIG 182
L+NSL+K Y+++ A +LF++M + VS+N MI G+AK+G L + +LFH M G
Sbjct: 100 LRNSLIKRYVDNGCFECARQLFDEMSDRNVVSYNTMILGFAKVGNILGILELFHDMRSHG 159
Query: 183 FEPDEFTMLGLLMCCGRIEDARLGKSVHAWMERRALINDSNLILGNALLDMYVKCKELEI 362
EPD+FTMLGLL+ CG++ + +LGKSVHA +E+ I SNLIL NALLDMYVKC EL++
Sbjct: 160 LEPDDFTMLGLLLLCGQLGETKLGKSVHAQIEKS--IGSSNLILYNALLDMYVKCNELKL 217
Query: 363 THRVFNKFMKKDVITWNTMIAGYAKVGELELACSLFFQMPNRDLVSWNSLIAGYAQRDDY 542
+VF+ M+KD ++WNT+IAGYAKVGELELAC LF Q+P RD+VSWNSLI+GYAQ DY
Sbjct: 218 ARKVFDGPMEKDTVSWNTIIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDY 277
Query: 543 ITVRSLFSDMIRDDINPDSVTMVNLVSAAAEIGALDEGRWVHGWLVRKKMEVGPFLGSAL 722
+TV+ LF+ M +++ PD VT+VNL+SA AE+GALD+GRW+HG V+ ++ F GSAL
Sbjct: 278 VTVKCLFTRMFAENVKPDKVTIVNLISAVAEMGALDQGRWIHGLAVKMLTKIEAFSGSAL 337
Query: 723 VDMYCKCGSVEKAFTVFQGVIKKDVTLWTTMISGLAYHGYGGHALELFSKMQKDVMPNAV 902
+DMYCKCGS+E+AF +F + +KDVT WTTMI+G A+HG+G ALELFS MQ + PN V
Sbjct: 338 IDMYCKCGSIERAFVIFNQIPEKDVTTWTTMITGFAFHGFGNKALELFSVMQAETKPNDV 397
Query: 903 TFVAVLTACSHSGLVDQ 953
TFV+VL ACSHSGLVD+
Sbjct: 398 TFVSVLAACSHSGLVDE 414
Score = 96.7 bits (239), Expect = 1e-17
Identities = 65/234 (27%), Positives = 112/234 (47%), Gaps = 32/234 (13%)
Frame = +3
Query: 348 KELEITHRVFNKFMKKDVITWNTMIAGYAKVGELELACSLFFQMPNRDLVSWNSLIAGYA 527
K++ VF K++ + N++I Y G E A LF +M +R++VS+N++I G+A
Sbjct: 82 KQIHCHALVFGLLSKEEYLR-NSLIKRYVDNGCFECARQLFDEMSDRNVVSYNTMILGFA 140
Query: 528 QRDDYITVRSLFSDMIRDDINPDSVTMVNLVSAAAEIGALDEGRWVHGWLVRKKMEVGPF 707
+ + + + LF DM + PD TM+ L+ ++G G+ VH + +
Sbjct: 141 KVGNILGILELFHDMRSHGLEPDDFTMLGLLLLCGQLGETKLGKSVHAQIEKSIGSSNLI 200
Query: 708 LGSALVDMYCKCGSVEKAFTVFQGVIKKDVTLWTTMISGLAYHGYGGHALELFSKM---- 875
L +AL+DMY KC ++ A VF G ++KD W T+I+G A G A +LF+++
Sbjct: 201 LYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNTIIAGYAKVGELELACDLFNQIPTRD 260
Query: 876 ----------------------------QKDVMPNAVTFVAVLTACSHSGLVDQ 953
++V P+ VT V +++A + G +DQ
Sbjct: 261 IVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPDKVTIVNLISAVAEMGALDQ 314
>ref|XP_004139380.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 389 bits (999), Expect = e-106
Identities = 186/317 (58%), Positives = 245/317 (77%)
Frame = +3
Query: 3 LQNSLLKMYLEHEELGPAHKLFEQMPTLDAVSFNIMIAGYAKMGCSLEVSKLFHKMVGIG 182
L+NSL+K Y+++ A +LF++M + VS+N MI G+AK+G L + +LFH M G
Sbjct: 165 LRNSLIKRYVDNGCFECARQLFDEMSDRNVVSYNTMILGFAKVGNILGILELFHDMRSHG 224
Query: 183 FEPDEFTMLGLLMCCGRIEDARLGKSVHAWMERRALINDSNLILGNALLDMYVKCKELEI 362
EPD+FTMLGLL+ CG++ + +LGKSVHA +E+ I SNLIL NALLDMYVKC EL++
Sbjct: 225 LEPDDFTMLGLLLLCGQLGETKLGKSVHAQIEKS--IGSSNLILYNALLDMYVKCNELKL 282
Query: 363 THRVFNKFMKKDVITWNTMIAGYAKVGELELACSLFFQMPNRDLVSWNSLIAGYAQRDDY 542
+VF+ M+KD ++WNT+IAGYAKVGELELAC LF Q+P RD+VSWNSLI+GYAQ DY
Sbjct: 283 ARKVFDGPMEKDTVSWNTIIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDY 342
Query: 543 ITVRSLFSDMIRDDINPDSVTMVNLVSAAAEIGALDEGRWVHGWLVRKKMEVGPFLGSAL 722
+TV+ LF+ M +++ PD VT+VNL+SA AE+GALD+GRW+HG V+ ++ F GSAL
Sbjct: 343 VTVKCLFTRMFAENVKPDKVTIVNLISAVAEMGALDQGRWIHGLAVKMLTKIEAFSGSAL 402
Query: 723 VDMYCKCGSVEKAFTVFQGVIKKDVTLWTTMISGLAYHGYGGHALELFSKMQKDVMPNAV 902
+DMYCKCGS+E+AF +F + +KDVT WTTMI+G A+HG+G ALELFS MQ + PN V
Sbjct: 403 IDMYCKCGSIERAFVIFNQIPEKDVTTWTTMITGFAFHGFGNKALELFSVMQAETKPNDV 462
Query: 903 TFVAVLTACSHSGLVDQ 953
TFV+VL ACSHSGLVD+
Sbjct: 463 TFVSVLAACSHSGLVDE 479
Score = 96.7 bits (239), Expect = 1e-17
Identities = 65/234 (27%), Positives = 112/234 (47%), Gaps = 32/234 (13%)
Frame = +3
Query: 348 KELEITHRVFNKFMKKDVITWNTMIAGYAKVGELELACSLFFQMPNRDLVSWNSLIAGYA 527
K++ VF K++ + N++I Y G E A LF +M +R++VS+N++I G+A
Sbjct: 147 KQIHCHALVFGLLSKEEYLR-NSLIKRYVDNGCFECARQLFDEMSDRNVVSYNTMILGFA 205
Query: 528 QRDDYITVRSLFSDMIRDDINPDSVTMVNLVSAAAEIGALDEGRWVHGWLVRKKMEVGPF 707
+ + + + LF DM + PD TM+ L+ ++G G+ VH + +
Sbjct: 206 KVGNILGILELFHDMRSHGLEPDDFTMLGLLLLCGQLGETKLGKSVHAQIEKSIGSSNLI 265
Query: 708 LGSALVDMYCKCGSVEKAFTVFQGVIKKDVTLWTTMISGLAYHGYGGHALELFSKM---- 875
L +AL+DMY KC ++ A VF G ++KD W T+I+G A G A +LF+++
Sbjct: 266 LYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNTIIAGYAKVGELELACDLFNQIPTRD 325
Query: 876 ----------------------------QKDVMPNAVTFVAVLTACSHSGLVDQ 953
++V P+ VT V +++A + G +DQ
Sbjct: 326 IVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPDKVTIVNLISAVAEMGALDQ 379
>ref|XP_006408155.1| hypothetical protein EUTSA_v10020244mg [Eutrema salsugineum]
gi|557109301|gb|ESQ49608.1| hypothetical protein
EUTSA_v10020244mg [Eutrema salsugineum]
Length = 656
Score = 371 bits (952), Expect = e-100
Identities = 182/320 (56%), Positives = 242/320 (75%), Gaps = 3/320 (0%)
Frame = +3
Query: 3 LQNSLLKMYLEHEELGPAHKLFEQMPTLDAVSFNIMIAGYAKMGCSLEVSKLFHKMVGIG 182
L NSL+ +Y+E LG A K+F+ M D SFN MIAGYA+ G SLE +L++KMVG G
Sbjct: 163 LWNSLVMVYMELGSLGFAEKVFDTMTEPDVSSFNTMIAGYARKGFSLEALELYYKMVGDG 222
Query: 183 FEPDEFTMLGLLMCCGRIEDARLGKSVHAWMERRALINDSNLILGNALLDMYVKCKELEI 362
EPDE+ +LGLL+CCG++ D RLGK VH W+ERR + SNLIL NALLDMY KCKE +
Sbjct: 223 IEPDEYAVLGLLVCCGQLSDIRLGKGVHGWIERRKPGSSSNLILSNALLDMYFKCKEPGL 282
Query: 363 THRVFNKFMKKDVITWNTMIAGYAKVGELELACSLFFQMPNRDLVSWNSLIAGYAQRD-D 539
R F+ KKD+ +WNTM+ G+ ++G++E A +F+QMP RDLVSWNSL+ GY+++ D
Sbjct: 283 VKRAFDMMKKKDMRSWNTMVGGFVRLGDMEAAQDVFYQMPKRDLVSWNSLLFGYSKKGCD 342
Query: 540 YITVRSLFSDM-IRDDINPDSVTMVNLVSAAAEIGALDEGRWVHGWLVRKKMEVGPFLGS 716
VR LFS+M I + + PD VT+V+L+S AA G LD+GRWVHG ++R ++++ FLGS
Sbjct: 343 QRAVRELFSEMLIVEKVIPDRVTVVSLISGAANNGELDQGRWVHGLMIRLRLKIDAFLGS 402
Query: 717 ALVDMYCKCGSVEKAFTVFQGVIKKDVTLWTTMISGLAYHGYGGHALELFSKMQKD-VMP 893
AL+DMYCKCG++E+AF VF+ V +KDVTLWTTMI+G A+HG G AL+LF +MQ++ V P
Sbjct: 403 ALIDMYCKCGAIERAFVVFKTVPEKDVTLWTTMITGSAFHGNGKQALQLFEEMQEEGVTP 462
Query: 894 NAVTFVAVLTACSHSGLVDQ 953
N VT +AVLTACSHSGLV++
Sbjct: 463 NKVTLLAVLTACSHSGLVEE 482
Score = 94.0 bits (232), Expect = 8e-17
Identities = 76/300 (25%), Positives = 139/300 (46%), Gaps = 6/300 (2%)
Frame = +3
Query: 9 NSLLKMYLEHEELGPAHKLFEQMPTLDAVSFNIMIAGYAKMGCSLE-VSKLFHKMVGIG- 182
N+++ ++ ++ A +F QMP D VS+N ++ GY+K GC V +LF +M+ +
Sbjct: 299 NTMVGGFVRLGDMEAAQDVFYQMPKRDLVSWNSLLFGYSKKGCDQRAVRELFSEMLIVEK 358
Query: 183 FEPDEFTMLGLLMCCGRIEDARLGKSVHAWMERRALINDSNLILGNALLDMYVKCKELEI 362
PD T++ L+ + G+ VH M R L D+ LG+AL+DMY KC
Sbjct: 359 VIPDRVTVVSLISGAANNGELDQGRWVHGLMIRLRLKIDA--FLGSALIDMYCKC----- 411
Query: 363 THRVFNKFMKKDVITWNTMIAGYAKVGELELACSLFFQMPNRDLVSWNSLIAGYAQRDDY 542
G +E A +F +P +D+ W ++I G A +
Sbjct: 412 --------------------------GAIERAFVVFKTVPEKDVTLWTTMITGSAFHGNG 445
Query: 543 ITVRSLFSDMIRDDINPDSVTMVNLVSAAAEIGALDEGRWVHGWLVRKKMEVGPFLG--S 716
LF +M + + P+ VT++ +++A + G ++EG + + + K P
Sbjct: 446 KQALQLFEEMQEEGVTPNKVTLLAVLTACSHSGLVEEGLHIFNHM-KLKFGFDPETEHYG 504
Query: 717 ALVDMYCKCGSVEKAFTVFQG--VIKKDVTLWTTMISGLAYHGYGGHALELFSKMQKDVM 890
+LVD+ C+ G VE+A + Q ++ ++W +++S GG +E K+++
Sbjct: 505 SLVDLLCRAGRVEEAKDLVQKKMPMRPSQSMWGSILSACR----GGEYIETAEMALKELL 560
Score = 67.8 bits (164), Expect = 6e-09
Identities = 50/166 (30%), Positives = 93/166 (56%), Gaps = 5/166 (3%)
Frame = +3
Query: 447 LELACSLFFQM-PNRDLVSWNSLIAGYA--QRDDYITVRSLFSDMIRDDINPDSVTMVNL 617
+++A LF PN ++ +N++I+ + ++D + +L+S MIR ++PD T ++L
Sbjct: 79 IDMAKLLFLNFTPNPNVFVYNTMISALSCSKKDCF----ALYSSMIRQSVSPDRQTFLHL 134
Query: 618 VSAAAEIGALDEGRWVHGWL-VRKKMEVGPFLGSALVDMYCKCGSVEKAFTVFQGVIKKD 794
+ A+ L E + +H + V + +G +L ++LV +Y + GS+ A VF + + D
Sbjct: 135 MKASI---LLSEVKQIHCHIIVFGCLSLGNYLWNSLVMVYMELGSLGFAEKVFDTMTEPD 191
Query: 795 VTLWTTMISGLAYHGYGGHALELFSKMQKD-VMPNAVTFVAVLTAC 929
V+ + TMI+G A G+ ALEL+ KM D + P+ + +L C
Sbjct: 192 VSSFNTMIAGYARKGFSLEALELYYKMVGDGIEPDEYAVLGLLVCC 237
>ref|XP_006299672.1| hypothetical protein CARUB_v10015860mg [Capsella rubella]
gi|482568381|gb|EOA32570.1| hypothetical protein
CARUB_v10015860mg [Capsella rubella]
Length = 651
Score = 366 bits (939), Expect = 8e-99
Identities = 183/320 (57%), Positives = 235/320 (73%), Gaps = 3/320 (0%)
Frame = +3
Query: 3 LQNSLLKMYLEHEELGPAHKLFEQMPTLDAVSFNIMIAGYAKMGCSLEVSKLFHKMVGIG 182
L NSL+K+Y+E LG A K+F MP D SFN+MI GYAK G LE KL++KMVG G
Sbjct: 163 LWNSLVKLYMELGSLGFAEKVFAIMPEPDVSSFNVMIVGYAKKGFCLEALKLYYKMVGDG 222
Query: 183 FEPDEFTMLGLLMCCGRIEDARLGKSVHAWMERRALINDSNLILGNALLDMYVKCKELEI 362
EPDE+ +LGLL+C G++ D RLGK VH W+ERR + SNLIL NALLDMY KCK+ +
Sbjct: 223 IEPDEYAVLGLLVCSGQLSDTRLGKGVHGWIERRRPGHSSNLILSNALLDMYFKCKDSGL 282
Query: 363 THRVFNKFMKKDVITWNTMIAGYAKVGELELACSLFFQMPNRDLVSWNSLIAGYAQRD-D 539
R F+ KKD+ +WNTM+AG+ ++G++E A + F QMP RDLVSWNSL+ GY+++ D
Sbjct: 283 AKRAFDAMKKKDMCSWNTMVAGFVRLGDMEAAQAFFDQMPKRDLVSWNSLLFGYSKKGCD 342
Query: 540 YITVRSLFSDM-IRDDINPDSVTMVNLVSAAAEIGALDEGRWVHGWLVRKKMEVGPFLGS 716
VR LF +M I + I PD VTMV+L+S AA G L GRWVHG ++R +++ FL S
Sbjct: 343 QSAVRELFYEMLITEKIKPDRVTMVSLISGAANNGDLSHGRWVHGLVIRLQLKGDAFLSS 402
Query: 717 ALVDMYCKCGSVEKAFTVFQGVIKKDVTLWTTMISGLAYHGYGGHALELFSKMQKD-VMP 893
AL+DMYCKCG +E+AF VF+ +KDVTLWT+MI+GLA+HG G AL+LF MQ++ VMP
Sbjct: 403 ALIDMYCKCGIIERAFMVFKTATEKDVTLWTSMITGLAFHGNGQQALQLFENMQEEGVMP 462
Query: 894 NAVTFVAVLTACSHSGLVDQ 953
N VT +AVLTACSHSGLV+Q
Sbjct: 463 NKVTLLAVLTACSHSGLVEQ 482
Score = 94.7 bits (234), Expect = 5e-17
Identities = 72/277 (25%), Positives = 130/277 (46%), Gaps = 6/277 (2%)
Frame = +3
Query: 9 NSLLKMYLEHEELGPAHKLFEQMPTLDAVSFNIMIAGYAKMGCSLE-VSKLFHKM-VGIG 182
N+++ ++ ++ A F+QMP D VS+N ++ GY+K GC V +LF++M +
Sbjct: 299 NTMVAGFVRLGDMEAAQAFFDQMPKRDLVSWNSLLFGYSKKGCDQSAVRELFYEMLITEK 358
Query: 183 FEPDEFTMLGLLMCCGRIEDARLGKSVHAWMERRALINDSNLILGNALLDMYVKCKELEI 362
+PD TM+ L+ D G+ VH + R L D+ L +AL+DMY KC
Sbjct: 359 IKPDRVTMVSLISGAANNGDLSHGRWVHGLVIRLQLKGDA--FLSSALIDMYCKC----- 411
Query: 363 THRVFNKFMKKDVITWNTMIAGYAKVGELELACSLFFQMPNRDLVSWNSLIAGYAQRDDY 542
G +E A +F +D+ W S+I G A +
Sbjct: 412 --------------------------GIIERAFMVFKTATEKDVTLWTSMITGLAFHGNG 445
Query: 543 ITVRSLFSDMIRDDINPDSVTMVNLVSAAAEIGALDEGRWVHGWLVRKKMEVGPFLG--S 716
LF +M + + P+ VT++ +++A + G +++G V + ++K P
Sbjct: 446 QQALQLFENMQEEGVMPNKVTLLAVLTACSHSGLVEQGLHVFNHM-KEKFGFDPETEHYG 504
Query: 717 ALVDMYCKCGSVEKAFTVFQG--VIKKDVTLWTTMIS 821
+LVD+ C+ G VE+A + Q ++ ++W +++S
Sbjct: 505 SLVDLLCRAGRVEEAKDIMQTKMPMRPSQSMWGSILS 541
>ref|NP_187126.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207287|sp|Q9SR01.1|PP212_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g04750, mitochondrial; Flags: Precursor
gi|6175175|gb|AAF04901.1|AC011437_16 hypothetical protein
[Arabidopsis thaliana] gi|332640610|gb|AEE74131.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 661
Score = 364 bits (934), Expect = 3e-98
Identities = 180/320 (56%), Positives = 233/320 (72%), Gaps = 3/320 (0%)
Frame = +3
Query: 3 LQNSLLKMYLEHEELGPAHKLFEQMPTLDAVSFNIMIAGYAKMGCSLEVSKLFHKMVGIG 182
L NSL+K Y+E G A K+F +MP D SFN+MI GYAK G SLE KL+ KMV G
Sbjct: 168 LWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDG 227
Query: 183 FEPDEFTMLGLLMCCGRIEDARLGKSVHAWMERRALINDSNLILGNALLDMYVKCKELEI 362
EPDE+T+L LL+CCG + D RLGK VH W+ERR + SNLIL NALLDMY KCKE +
Sbjct: 228 IEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGL 287
Query: 363 THRVFNKFMKKDVITWNTMIAGYAKVGELELACSLFFQMPNRDLVSWNSLIAGYAQRD-D 539
R F+ KKD+ +WNTM+ G+ ++G++E A ++F QMP RDLVSWNSL+ GY+++ D
Sbjct: 288 AKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCD 347
Query: 540 YITVRSLFSDM-IRDDINPDSVTMVNLVSAAAEIGALDEGRWVHGWLVRKKMEVGPFLGS 716
TVR LF +M I + + PD VTMV+L+S AA G L GRWVHG ++R +++ FL S
Sbjct: 348 QRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSS 407
Query: 717 ALVDMYCKCGSVEKAFTVFQGVIKKDVTLWTTMISGLAYHGYGGHALELFSKMQKD-VMP 893
AL+DMYCKCG +E+AF VF+ +KDV LWT+MI+GLA+HG G AL+LF +MQ++ V P
Sbjct: 408 ALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTP 467
Query: 894 NAVTFVAVLTACSHSGLVDQ 953
N VT +AVLTACSHSGLV++
Sbjct: 468 NNVTLLAVLTACSHSGLVEE 487
Score = 93.2 bits (230), Expect = 1e-16
Identities = 72/277 (25%), Positives = 130/277 (46%), Gaps = 6/277 (2%)
Frame = +3
Query: 9 NSLLKMYLEHEELGPAHKLFEQMPTLDAVSFNIMIAGYAKMGCSLE-VSKLFHKMVGIG- 182
N+++ ++ ++ A +F+QMP D VS+N ++ GY+K GC V +LF++M +
Sbjct: 304 NTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEK 363
Query: 183 FEPDEFTMLGLLMCCGRIEDARLGKSVHAWMERRALINDSNLILGNALLDMYVKCKELEI 362
+PD TM+ L+ + G+ VH + R L D+ L +AL+DMY KC
Sbjct: 364 VKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDA--FLSSALIDMYCKC----- 416
Query: 363 THRVFNKFMKKDVITWNTMIAGYAKVGELELACSLFFQMPNRDLVSWNSLIAGYAQRDDY 542
G +E A +F +D+ W S+I G A +
Sbjct: 417 --------------------------GIIERAFMVFKTATEKDVALWTSMITGLAFHGNG 450
Query: 543 ITVRSLFSDMIRDDINPDSVTMVNLVSAAAEIGALDEGRWVHGWLVRKKMEVGPFLG--S 716
LF M + + P++VT++ +++A + G ++EG V + + K P
Sbjct: 451 QQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHM-KDKFGFDPETEHYG 509
Query: 717 ALVDMYCKCGSVEKAFTVFQG--VIKKDVTLWTTMIS 821
+LVD+ C+ G VE+A + Q ++ ++W +++S
Sbjct: 510 SLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILS 546
Score = 66.6 bits (161), Expect = 1e-08
Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 3/166 (1%)
Frame = +3
Query: 447 LELACSLFFQM-PNRDLVSWNSLIAGYAQRDDYITVRSLFSDMIRDDINPDSVTMVNLVS 623
L+LA LF PN ++ +N++I+ + + L+S MIR ++PD T + L+
Sbjct: 84 LDLAKLLFLNFTPNPNVFVYNTMISAVSSSKNECF--GLYSSMIRHRVSPDRQTFLYLMK 141
Query: 624 AAAEIGALDEGRWVH-GWLVRKKMEVGPFLGSALVDMYCKCGSVEKAFTVFQGVIKKDVT 800
A++ L E + +H +V + +G +L ++LV Y + G+ A VF + DV+
Sbjct: 142 ASS---FLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVS 198
Query: 801 LWTTMISGLAYHGYGGHALELFSKMQKD-VMPNAVTFVAVLTACSH 935
+ MI G A G+ AL+L+ KM D + P+ T +++L C H
Sbjct: 199 SFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGH 244
>ref|XP_002884467.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297330307|gb|EFH60726.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 657
Score = 363 bits (933), Expect = 4e-98
Identities = 180/320 (56%), Positives = 232/320 (72%), Gaps = 3/320 (0%)
Frame = +3
Query: 3 LQNSLLKMYLEHEELGPAHKLFEQMPTLDAVSFNIMIAGYAKMGCSLEVSKLFHKMVGIG 182
L NSL+K Y+E LG A K+F MP D SFN+MI GYAK G LE +L++KMV G
Sbjct: 167 LWNSLVKFYMELGSLGFAEKVFAIMPQPDVSSFNVMIVGYAKQGFGLEALELYYKMVSDG 226
Query: 183 FEPDEFTMLGLLMCCGRIEDARLGKSVHAWMERRALINDSNLILGNALLDMYVKCKELEI 362
EPDE+T+LGLL+CCG + D RLGK VH W+ERR + SNLIL NALLDMY KCKE +
Sbjct: 227 IEPDEYTLLGLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILRNALLDMYFKCKESGL 286
Query: 363 THRVFNKFMKKDVITWNTMIAGYAKVGELELACSLFFQMPNRDLVSWNSLIAGYAQRD-D 539
R F+ KKD+ +WNTM+ G+ ++G++E A ++F QMP RDLVSWNSL+ Y+++ D
Sbjct: 287 AKRAFDALKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPQRDLVSWNSLLFCYSKKGCD 346
Query: 540 YITVRSLFSDM-IRDDINPDSVTMVNLVSAAAEIGALDEGRWVHGWLVRKKMEVGPFLGS 716
VR LF +M I + + PD VTMV+L+S AA G L GRWVHG ++R ++E FL S
Sbjct: 347 QRAVRELFYEMLIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLMIRLQLEGDAFLSS 406
Query: 717 ALVDMYCKCGSVEKAFTVFQGVIKKDVTLWTTMISGLAYHGYGGHALELFSKMQ-KDVMP 893
AL+DMYCKCG +E+AF VF+ +KDV LWT+MI+G A+HGYG AL+LF +MQ +DV P
Sbjct: 407 ALIDMYCKCGLIERAFMVFKTATEKDVPLWTSMITGFAFHGYGQQALQLFKRMQEEDVTP 466
Query: 894 NAVTFVAVLTACSHSGLVDQ 953
N VT +AVLTACSHSGLV++
Sbjct: 467 NKVTLLAVLTACSHSGLVEE 486
Score = 72.4 bits (176), Expect = 2e-10
Identities = 52/166 (31%), Positives = 90/166 (54%), Gaps = 3/166 (1%)
Frame = +3
Query: 447 LELACSLFFQM-PNRDLVSWNSLIAGYAQRDDYITVRSLFSDMIRDDINPDSVTMVNLVS 623
L+LA LF PN ++ +N++I+ + + L+S MIR ++PD T ++L+
Sbjct: 83 LDLAKLLFLDFTPNPNVFVYNTMISAVSSSKNECF--GLYSSMIRYRVSPDRQTFLHLMK 140
Query: 624 AAAEIGALDEGRWVHGWLVRKK-MEVGPFLGSALVDMYCKCGSVEKAFTVFQGVIKKDVT 800
A++ L E + +H ++ + +G +L ++LV Y + GS+ A VF + + DV+
Sbjct: 141 ASS---FLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGSLGFAEKVFAIMPQPDVS 197
Query: 801 LWTTMISGLAYHGYGGHALELFSKMQKD-VMPNAVTFVAVLTACSH 935
+ MI G A G+G ALEL+ KM D + P+ T + +L C H
Sbjct: 198 SFNVMIVGYAKQGFGLEALELYYKMVSDGIEPDEYTLLGLLVCCGH 243
>ref|XP_006838873.1| hypothetical protein AMTR_s00002p00267090 [Amborella trichopoda]
gi|548841379|gb|ERN01442.1| hypothetical protein
AMTR_s00002p00267090 [Amborella trichopoda]
Length = 622
Score = 342 bits (876), Expect = 2e-91
Identities = 169/319 (52%), Positives = 226/319 (70%), Gaps = 2/319 (0%)
Frame = +3
Query: 3 LQNSLLKMYLEHEELGPAHKLFEQM-PTLDAVSFNIMIAGYAKMGCSLEVSKLFHKMVGI 179
LQN+ +K+Y + + + A ++F QM + D VS+N MI G+A+ GC + LFH M
Sbjct: 128 LQNAFIKVYSDRQRVDLASQVFNQMHDSQDVVSWNSMIMGHARHGCPYKALWLFHDMGVA 187
Query: 180 GFEPDEFTMLGLLMCCGRIEDARLGKSVHAWMERRALINDSNLILGNALLDMYVKCKELE 359
G DEFT++G L+ CGRIEDA +GKS+HAW ++ N+ + NA +DMYVKC EL
Sbjct: 188 GIIADEFTLVGSLVACGRIEDASMGKSIHAWTICHWGPSNINMTMSNAFIDMYVKCGELG 247
Query: 360 ITHRVFNKFMKKDVITWNTMIAGYAKVGELELACSLFFQMPNRDLVSWNSLIAGYAQRDD 539
RVFN M+KD+ +WNTMIAGYAK+GEL LA LF++MP+RD VSWNS+I GYAQ+ +
Sbjct: 248 FAKRVFNGLMEKDIFSWNTMIAGYAKIGELGLALRLFYEMPSRDQVSWNSIIDGYAQKGN 307
Query: 540 YITVRSLFSDMIRDDINPDSVTMVNLVSAAAEIGALDEGRWVHGWLVRKKMEVGPFLGSA 719
+ V LF +M+ + PD T+++LV+AA E GALD+GRWVHGW+ R +++ PFL SA
Sbjct: 308 FGVVMELFVEMLAQNAVPDRATILSLVAAAGEAGALDQGRWVHGWVQRAHIDMDPFLCSA 367
Query: 720 LVDMYCKCGSVEKAFTVFQGVIKKDVTLWTTMISGLAYHGYGGHALELFSKMQK-DVMPN 896
L+ MYCKCGSVE A VF+ ++DV +WT MISGLA+HGYG AL LFS+MQ + PN
Sbjct: 368 LITMYCKCGSVEHAKKVFKLARERDVLIWTAMISGLAFHGYGTDALGLFSQMQNVGLKPN 427
Query: 897 AVTFVAVLTACSHSGLVDQ 953
VTF+ VL ACSHSG+V +
Sbjct: 428 EVTFIGVLAACSHSGMVSE 446
>gb|EAZ28544.1| hypothetical protein OsJ_12524 [Oryza sativa Japonica Group]
Length = 559
Score = 325 bits (833), Expect = 2e-86
Identities = 162/318 (50%), Positives = 217/318 (68%), Gaps = 1/318 (0%)
Frame = +3
Query: 3 LQNSLLKMYLEHEELGPAHKLFEQMPTLDAVSFNIMIAGYAKMGCSLEVSKLFHKMVGIG 182
L+NSL+KMYL+ ++ A +F PT DAVS NIM++GY K GCS + + F M G
Sbjct: 48 LRNSLIKMYLDAGDVEAAEAMFRCAPTADAVSCNIMLSGYVKGGCSGKALRFFRGMASRG 107
Query: 183 FEPDEFTMLGLLMCCGRIEDARLGKSVHAWMERRALINDSNLILGNALLDMYVKCKELEI 362
D++T + LL CCGR++ A LG+SVH + RR + D LIL NALLDMY KC E+
Sbjct: 108 IGVDQYTAVALLACCGRLKKAVLGRSVHGVVVRRIGVADRGLILSNALLDMYAKCGEMNT 167
Query: 363 THRVFNKFMKKDVITWNTMIAGYAKVGELELACSLFFQMPNRDLVSWNSLIAGYAQRDDY 542
RVF++ ++D I+WNTM+AG+A G L+LA F + P RD++SWN+L+AGYA+ +++
Sbjct: 168 AMRVFDEAGERDGISWNTMVAGFANAGLLDLASKYFGEAPARDIISWNALLAGYARYEEF 227
Query: 543 ITVRSLFSDMIRDDINPDSVTMVNLVSAAAEIGALDEGRWVHGWLVRKKMEVGPFLGSAL 722
LF DM+ + PD VT V L+SA A G L+ R VHGW+V++ FL SAL
Sbjct: 228 SATMILFHDMLASSVIPDKVTAVTLISAVAGKGTLNSARSVHGWVVKEHGTQDSFLASAL 287
Query: 723 VDMYCKCGSVEKAFTVFQGVIKKDVTLWTTMISGLAYHGYGGHALELFSKMQKD-VMPNA 899
VDMYCKCGS++ A+ VF+ + KDVTLWT MISGLA+HG+G AL+LF KMQ + PN
Sbjct: 288 VDMYCKCGSIKLAYAVFEKAVDKDVTLWTAMISGLAFHGHGDVALDLFWKMQAEGTEPNG 347
Query: 900 VTFVAVLTACSHSGLVDQ 953
VT VAVL+ACSH+GL D+
Sbjct: 348 VTLVAVLSACSHAGLFDE 365
Score = 86.3 bits (212), Expect = 2e-14
Identities = 67/273 (24%), Positives = 120/273 (43%), Gaps = 2/273 (0%)
Frame = +3
Query: 9 NSLLKMYLEHEELGPAHKLFEQMPTLDAVSFNIMIAGYAKMGCSLEVSKLFHKMVGIGFE 188
N+++ + L A K F + P D +S+N ++AGYA+ LFH M+
Sbjct: 184 NTMVAGFANAGLLDLASKYFGEAPARDIISWNALLAGYARYEEFSATMILFHDMLASSVI 243
Query: 189 PDEFTMLGLLMCCGRIEDARLGKSVHAWMERRALINDSNLILGNALLDMYVKCKELEITH 368
PD+ T + L+ +SVH W+ + DS L +AL+DMY KC
Sbjct: 244 PDKVTAVTLISAVAGKGTLNSARSVHGWVVKEHGTQDS--FLASALVDMYCKC------- 294
Query: 369 RVFNKFMKKDVITWNTMIAGYAKVGELELACSLFFQMPNRDLVSWNSLIAGYAQRDDYIT 548
G ++LA ++F + ++D+ W ++I+G A
Sbjct: 295 ------------------------GSIKLAYAVFEKAVDKDVTLWTAMISGLAFHGHGDV 330
Query: 549 VRSLFSDMIRDDINPDSVTMVNLVSAAAEIGALDEGRWVHGWLVRK-KMEVGPFLGSALV 725
LF M + P+ VT+V ++SA + G DEG + L ++ +E G +V
Sbjct: 331 ALDLFWKMQAEGTEPNGVTLVAVLSACSHAGLFDEGCKIFDTLKQRFNIEPGVEHFGCMV 390
Query: 726 DMYCKCGSVEKAFTVFQGV-IKKDVTLWTTMIS 821
D+ + G + A + + + +K ++W +++S
Sbjct: 391 DLLARSGRLSDAVDLARRMPMKPSRSIWGSILS 423
Score = 82.0 bits (201), Expect = 3e-13
Identities = 73/237 (30%), Positives = 101/237 (42%), Gaps = 2/237 (0%)
Frame = +3
Query: 168 MVGIGFEPDEFTMLGLLMCCGRIEDARLGKSVHAWMERRALINDSNLILGNALLDMYVKC 347
M+ PDE T L LL E +GK VHA + L S + L N+L+ MY+
Sbjct: 3 MLASSIHPDEQTFLSLLKSVDA-ERRSVGKQVHAHVVVTGL--HSRVYLRNSLIKMYLDA 59
Query: 348 KELEITHRVFNKFMKKDVITWNTMIAGYAKVGELELACSLFFQMPNRDLVSWNSLIAGYA 527
++E +F D ++ N M++GY K G CS G A
Sbjct: 60 GDVEAAEAMFRCAPTADAVSCNIMLSGYVKGG-----CS------------------GKA 96
Query: 528 QRDDYITVRSLFSDMIRDDINPDSVTMVNLVSAAAEIGALDEGRWVHGWLVRK--KMEVG 701
R F M I D T V L++ + GR VHG +VR+ + G
Sbjct: 97 LR--------FFRGMASRGIGVDQYTAVALLACCGRLKKAVLGRSVHGVVVRRIGVADRG 148
Query: 702 PFLGSALVDMYCKCGSVEKAFTVFQGVIKKDVTLWTTMISGLAYHGYGGHALELFSK 872
L +AL+DMY KCG + A VF ++D W TM++G A G L+L SK
Sbjct: 149 LILSNALLDMYAKCGEMNTAMRVFDEAGERDGISWNTMVAGFANAG----LLDLASK 201
>gb|AAP12991.1| hypothetical protein [Oryza sativa Japonica Group]
gi|40539031|gb|AAR87288.1| putative PPR repeat containing
protein [Oryza sativa Japonica Group]
gi|108711017|gb|ABF98812.1| pentatricopeptide, putative,
expressed [Oryza sativa Japonica Group]
Length = 676
Score = 325 bits (833), Expect = 2e-86
Identities = 162/318 (50%), Positives = 217/318 (68%), Gaps = 1/318 (0%)
Frame = +3
Query: 3 LQNSLLKMYLEHEELGPAHKLFEQMPTLDAVSFNIMIAGYAKMGCSLEVSKLFHKMVGIG 182
L+NSL+KMYL+ ++ A +F PT DAVS NIM++GY K GCS + + F M G
Sbjct: 165 LRNSLIKMYLDAGDVEAAEAMFRCAPTADAVSCNIMLSGYVKGGCSGKALRFFRGMASRG 224
Query: 183 FEPDEFTMLGLLMCCGRIEDARLGKSVHAWMERRALINDSNLILGNALLDMYVKCKELEI 362
D++T + LL CCGR++ A LG+SVH + RR + D LIL NALLDMY KC E+
Sbjct: 225 IGVDQYTAVALLACCGRLKKAVLGRSVHGVVVRRIGVADRGLILSNALLDMYAKCGEMNT 284
Query: 363 THRVFNKFMKKDVITWNTMIAGYAKVGELELACSLFFQMPNRDLVSWNSLIAGYAQRDDY 542
RVF++ ++D I+WNTM+AG+A G L+LA F + P RD++SWN+L+AGYA+ +++
Sbjct: 285 AMRVFDEAGERDGISWNTMVAGFANAGLLDLASKYFGEAPARDIISWNALLAGYARYEEF 344
Query: 543 ITVRSLFSDMIRDDINPDSVTMVNLVSAAAEIGALDEGRWVHGWLVRKKMEVGPFLGSAL 722
LF DM+ + PD VT V L+SA A G L+ R VHGW+V++ FL SAL
Sbjct: 345 SATMILFHDMLASSVIPDKVTAVTLISAVAGKGTLNSARSVHGWVVKEHGTQDSFLASAL 404
Query: 723 VDMYCKCGSVEKAFTVFQGVIKKDVTLWTTMISGLAYHGYGGHALELFSKMQKD-VMPNA 899
VDMYCKCGS++ A+ VF+ + KDVTLWT MISGLA+HG+G AL+LF KMQ + PN
Sbjct: 405 VDMYCKCGSIKLAYAVFEKAVDKDVTLWTAMISGLAFHGHGDVALDLFWKMQAEGTEPNG 464
Query: 900 VTFVAVLTACSHSGLVDQ 953
VT VAVL+ACSH+GL D+
Sbjct: 465 VTLVAVLSACSHAGLFDE 482
Score = 87.4 bits (215), Expect = 7e-15
Identities = 83/282 (29%), Positives = 118/282 (41%), Gaps = 9/282 (3%)
Frame = +3
Query: 54 AHKLFEQM-PTLDAVSFNIMIAGYAKMGCSLEVSK------LFHKMVGIGFEPDEFTMLG 212
A LFE P + +N+M++ A + S L+ M+ PDE T L
Sbjct: 75 AETLFEHFTPRPNLYIYNLMLSSAAAAAAAASSSPSRRPAALYMSMLASSIHPDEQTFLS 134
Query: 213 LLMCCGRIEDARLGKSVHAWMERRALINDSNLILGNALLDMYVKCKELEITHRVFNKFMK 392
LL E +GK VHA + L S + L N+L+ MY+ ++E +F
Sbjct: 135 LLKSVDA-ERRSVGKQVHAHVVVTGL--HSRVYLRNSLIKMYLDAGDVEAAEAMFRCAPT 191
Query: 393 KDVITWNTMIAGYAKVGELELACSLFFQMPNRDLVSWNSLIAGYAQRDDYITVRSLFSDM 572
D ++ N M++GY K G CS G A R F M
Sbjct: 192 ADAVSCNIMLSGYVKGG-----CS------------------GKALR--------FFRGM 220
Query: 573 IRDDINPDSVTMVNLVSAAAEIGALDEGRWVHGWLVRK--KMEVGPFLGSALVDMYCKCG 746
I D T V L++ + GR VHG +VR+ + G L +AL+DMY KCG
Sbjct: 221 ASRGIGVDQYTAVALLACCGRLKKAVLGRSVHGVVVRRIGVADRGLILSNALLDMYAKCG 280
Query: 747 SVEKAFTVFQGVIKKDVTLWTTMISGLAYHGYGGHALELFSK 872
+ A VF ++D W TM++G A G L+L SK
Sbjct: 281 EMNTAMRVFDEAGERDGISWNTMVAGFANAG----LLDLASK 318
Score = 86.3 bits (212), Expect = 2e-14
Identities = 67/273 (24%), Positives = 120/273 (43%), Gaps = 2/273 (0%)
Frame = +3
Query: 9 NSLLKMYLEHEELGPAHKLFEQMPTLDAVSFNIMIAGYAKMGCSLEVSKLFHKMVGIGFE 188
N+++ + L A K F + P D +S+N ++AGYA+ LFH M+
Sbjct: 301 NTMVAGFANAGLLDLASKYFGEAPARDIISWNALLAGYARYEEFSATMILFHDMLASSVI 360
Query: 189 PDEFTMLGLLMCCGRIEDARLGKSVHAWMERRALINDSNLILGNALLDMYVKCKELEITH 368
PD+ T + L+ +SVH W+ + DS L +AL+DMY KC
Sbjct: 361 PDKVTAVTLISAVAGKGTLNSARSVHGWVVKEHGTQDS--FLASALVDMYCKC------- 411
Query: 369 RVFNKFMKKDVITWNTMIAGYAKVGELELACSLFFQMPNRDLVSWNSLIAGYAQRDDYIT 548
G ++LA ++F + ++D+ W ++I+G A
Sbjct: 412 ------------------------GSIKLAYAVFEKAVDKDVTLWTAMISGLAFHGHGDV 447
Query: 549 VRSLFSDMIRDDINPDSVTMVNLVSAAAEIGALDEGRWVHGWLVRK-KMEVGPFLGSALV 725
LF M + P+ VT+V ++SA + G DEG + L ++ +E G +V
Sbjct: 448 ALDLFWKMQAEGTEPNGVTLVAVLSACSHAGLFDEGCKIFDTLKQRFNIEPGVEHFGCMV 507
Query: 726 DMYCKCGSVEKAFTVFQGV-IKKDVTLWTTMIS 821
D+ + G + A + + + +K ++W +++S
Sbjct: 508 DLLARSGRLSDAVDLARRMPMKPSRSIWGSILS 540
>ref|XP_003559839.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Brachypodium distachyon]
Length = 601
Score = 325 bits (832), Expect = 2e-86
Identities = 161/318 (50%), Positives = 215/318 (67%), Gaps = 1/318 (0%)
Frame = +3
Query: 3 LQNSLLKMYLEHEELGPAHKLFEQMPTLDAVSFNIMIAGYAKMGCSLEVSKLFHKMVGIG 182
L+NSL+KMYL+ + A +F+ +P D VS NIM++GY K GC + +LF M
Sbjct: 154 LRNSLIKMYLDAGDAETAEAMFQSVPVPDVVSCNIMLSGYVKGGCVVNALQLFRDMASRE 213
Query: 183 FEPDEFTMLGLLMCCGRIEDARLGKSVHAWMERRALINDSNLILGNALLDMYVKCKELEI 362
D++ + LL CCGR+++A LG+SVH + RR I D LIL NALLDMY KC E+
Sbjct: 214 IGVDQYAAVALLSCCGRLKNALLGRSVHGVVVRRMDIKDRGLILSNALLDMYAKCGEMNT 273
Query: 363 THRVFNKFMKKDVITWNTMIAGYAKVGELELACSLFFQMPNRDLVSWNSLIAGYAQRDDY 542
RVF + +KD I+WNTMIAG+A G L+LA FF P RDL+SWN+L+AGY + ++
Sbjct: 274 AMRVFGEAKEKDDISWNTMIAGFANDGMLDLASKFFFDAPCRDLISWNTLLAGYGRCREF 333
Query: 543 ITVRSLFSDMIRDDINPDSVTMVNLVSAAAEIGALDEGRWVHGWLVRKKMEVGPFLGSAL 722
V LF+DM+ + PD VT V L+SAA GAL+ G+ VHGW++++ FL S L
Sbjct: 334 AAVMELFNDMLSSRVRPDKVTAVTLISAAVSKGALNLGKSVHGWVLKEHGTQDAFLASTL 393
Query: 723 VDMYCKCGSVEKAFTVFQGVIKKDVTLWTTMISGLAYHGYGGHALELFSKMQKD-VMPNA 899
VDMYCKCG+V+ A+ VF+ + KDVTLWT MISGLA+HG+G AL+LF MQ + V PN
Sbjct: 394 VDMYCKCGNVKLAYAVFEKALDKDVTLWTAMISGLAFHGHGTEALDLFWNMQNEGVAPNG 453
Query: 900 VTFVAVLTACSHSGLVDQ 953
VT V VL+ACSH+GL+D+
Sbjct: 454 VTLVTVLSACSHAGLLDE 471
Score = 92.0 bits (227), Expect = 3e-16
Identities = 77/243 (31%), Positives = 104/243 (42%), Gaps = 4/243 (1%)
Frame = +3
Query: 156 LFHKMVGIGFEPDEFTMLGLLMCCGRIEDARLGKSVHAWMERRALIND--SNLILGNALL 329
L+ M+ PDE T L LL G A +GK VHA L+N S + L N+L+
Sbjct: 107 LYKSMLASSASPDEKTFLSLLKSVGC---ASVGKQVHA----HVLVNGLHSRVYLRNSLI 159
Query: 330 DMYVKCKELEITHRVFNKFMKKDVITWNTMIAGYAKVGELELACSLFFQMPNRDLVSWNS 509
MY+ + E +F DV++ N M++GY K G C
Sbjct: 160 KMYLDAGDAETAEAMFQSVPVPDVVSCNIMLSGYVKGG-----C---------------- 198
Query: 510 LIAGYAQRDDYITVRSLFSDMIRDDINPDSVTMVNLVSAAAEIGALDEGRWVHGWLVRKK 689
+ LF DM +I D V L+S + GR VHG +VR+
Sbjct: 199 ----------VVNALQLFRDMASREIGVDQYAAVALLSCCGRLKNALLGRSVHGVVVRRM 248
Query: 690 --MEVGPFLGSALVDMYCKCGSVEKAFTVFQGVIKKDVTLWTTMISGLAYHGYGGHALEL 863
+ G L +AL+DMY KCG + A VF +KD W TMI+G A G L+L
Sbjct: 249 DIKDRGLILSNALLDMYAKCGEMNTAMRVFGEAKEKDDISWNTMIAGFANDG----MLDL 304
Query: 864 FSK 872
SK
Sbjct: 305 ASK 307
Score = 90.9 bits (224), Expect = 7e-16
Identities = 67/274 (24%), Positives = 126/274 (45%), Gaps = 3/274 (1%)
Frame = +3
Query: 9 NSLLKMYLEHEELGPAHKLFEQMPTLDAVSFNIMIAGYAKMGCSLEVSKLFHKMVGIGFE 188
N+++ + L A K F P D +S+N ++AGY + V +LF+ M+
Sbjct: 290 NTMIAGFANDGMLDLASKFFFDAPCRDLISWNTLLAGYGRCREFAAVMELFNDMLSSRVR 349
Query: 189 PDEFTMLGLLMCCGRIEDARLGKSVHAWMERRALINDSNLILGNALLDMYVKCKELEITH 368
PD+ T + L+ LGKSVH W+ + D+ L + L+DMY KC
Sbjct: 350 PDKVTAVTLISAAVSKGALNLGKSVHGWVLKEHGTQDA--FLASTLVDMYCKC------- 400
Query: 369 RVFNKFMKKDVITWNTMIAGYAKVGELELACSLFFQMPNRDLVSWNSLIAGYAQRDDYIT 548
G ++LA ++F + ++D+ W ++I+G A
Sbjct: 401 ------------------------GNVKLAYAVFEKALDKDVTLWTAMISGLAFHGHGTE 436
Query: 549 VRSLFSDMIRDDINPDSVTMVNLVSAAAEIGALDEGRWVHGWLVRKKMEVGPFLG--SAL 722
LF +M + + P+ VT+V ++SA + G LDEG + + ++K+ + P + +
Sbjct: 437 ALDLFWNMQNEGVAPNGVTLVTVLSACSHAGLLDEGCEIF-YTMQKRFNIEPRVEHFGCM 495
Query: 723 VDMYCKCGSVEKAFTVFQGV-IKKDVTLWTTMIS 821
VD+ + G + A + + + +K ++W +++S
Sbjct: 496 VDLLARSGRLSDAVGLARMMPMKPSRSIWGSILS 529
>ref|XP_006651805.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g04750, mitochondrial-like [Oryza brachyantha]
Length = 640
Score = 322 bits (824), Expect = 2e-85
Identities = 160/318 (50%), Positives = 215/318 (67%), Gaps = 1/318 (0%)
Frame = +3
Query: 3 LQNSLLKMYLEHEELGPAHKLFEQMPTLDAVSFNIMIAGYAKMGCSLEVSKLFHKMVGIG 182
L+NSL+KMYL+ + A +F PT D V NIM++GY K GCS + + FH M G
Sbjct: 158 LRNSLIKMYLDAGNVEAAEAMFRCAPTADTVCCNIMLSGYVKGGCSGKALRFFHGMASKG 217
Query: 183 FEPDEFTMLGLLMCCGRIEDARLGKSVHAWMERRALINDSNLILGNALLDMYVKCKELEI 362
D++T + LL CCGR++ A LG+SVH + RR + D LIL NALLDMY KC E+
Sbjct: 218 VGVDQYTAVALLACCGRLKKALLGRSVHGVVVRRIDVADRGLILSNALLDMYAKCGEMNK 277
Query: 363 THRVFNKFMKKDVITWNTMIAGYAKVGELELACSLFFQMPNRDLVSWNSLIAGYAQRDDY 542
RVF + +KD I+WNTM+AG+A G L+LA F + P RD++SWN+L+AGYA+ ++
Sbjct: 278 AMRVFGEAGEKDGISWNTMVAGFANAGMLDLASEYFAESPARDIISWNALLAGYARYKEF 337
Query: 543 ITVRSLFSDMIRDDINPDSVTMVNLVSAAAEIGALDEGRWVHGWLVRKKMEVGPFLGSAL 722
LF DM+ + PD VT V L+SA A G + G+ +HGW+V++ FL SAL
Sbjct: 338 TATMKLFDDMLVSCVRPDKVTAVTLISAVAGKGTPNLGKSIHGWVVKEHGTQDAFLASAL 397
Query: 723 VDMYCKCGSVEKAFTVFQGVIKKDVTLWTTMISGLAYHGYGGHALELFSKMQKD-VMPNA 899
VDMYCKCG+V+ A VF+ + KDVTLWT MISGLA+HG+GG AL+LF KMQ + + PN
Sbjct: 398 VDMYCKCGNVKLAHAVFEKAMDKDVTLWTAMISGLAFHGHGGIALDLFWKMQAEGIEPNG 457
Query: 900 VTFVAVLTACSHSGLVDQ 953
VT V+VL+ACSH+GL+D+
Sbjct: 458 VTLVSVLSACSHAGLLDE 475
Score = 91.3 bits (225), Expect = 5e-16
Identities = 83/278 (29%), Positives = 117/278 (42%), Gaps = 5/278 (1%)
Frame = +3
Query: 54 AHKLFEQM-PTLDAVSFNIMIAGYAKMGCSL--EVSKLFHKMVGIGFEPDEFTMLGLLMC 224
A LFE P + +N+M++ A S + L+ M+ PDE T L LL
Sbjct: 72 ADLLFEHFTPRPNLYIYNLMLSAAAAASSSSPGRPAALYRSMLASSISPDEQTFLSLLKS 131
Query: 225 CGRIEDARLGKSVHAWMERRALINDSNLILGNALLDMYVKCKELEITHRVFNKFMKKDVI 404
E +GK VHA + L S + L N+L+ MY+ +E +F D +
Sbjct: 132 VDG-ESRSVGKQVHAHVVVNGL--HSRVYLRNSLIKMYLDAGNVEAAEAMFRCAPTADTV 188
Query: 405 TWNTMIAGYAKVGELELACSLFFQMPNRDLVSWNSLIAGYAQRDDYITVRSLFSDMIRDD 584
N M++GY K G CS G A R F M
Sbjct: 189 CCNIMLSGYVKGG-----CS------------------GKALR--------FFHGMASKG 217
Query: 585 INPDSVTMVNLVSAAAEIGALDEGRWVHGWLVRK--KMEVGPFLGSALVDMYCKCGSVEK 758
+ D T V L++ + GR VHG +VR+ + G L +AL+DMY KCG + K
Sbjct: 218 VGVDQYTAVALLACCGRLKKALLGRSVHGVVVRRIDVADRGLILSNALLDMYAKCGEMNK 277
Query: 759 AFTVFQGVIKKDVTLWTTMISGLAYHGYGGHALELFSK 872
A VF +KD W TM++G A G A E F++
Sbjct: 278 AMRVFGEAGEKDGISWNTMVAGFANAGMLDLASEYFAE 315
>ref|XP_002466476.1| hypothetical protein SORBIDRAFT_01g008465 [Sorghum bicolor]
gi|241920330|gb|EER93474.1| hypothetical protein
SORBIDRAFT_01g008465 [Sorghum bicolor]
Length = 599
Score = 314 bits (804), Expect = 4e-83
Identities = 156/318 (49%), Positives = 214/318 (67%), Gaps = 1/318 (0%)
Frame = +3
Query: 3 LQNSLLKMYLEHEELGPAHKLFEQMPTLDAVSFNIMIAGYAKMGCSLEVSKLFHKMVGIG 182
L+NSL+KMY++ ++ A +F LD VS NIM++GY GCSL+ F M G
Sbjct: 161 LRNSLIKMYIDAGDVETAELMFRSALVLDTVSCNIMLSGYVNEGCSLKALCFFRDMASRG 220
Query: 183 FEPDEFTMLGLLMCCGRIEDARLGKSVHAWMERRALINDSNLILGNALLDMYVKCKELEI 362
D +T + LL CCGR++ LG+SVH + RR D+ LIL NALLDMY KC +
Sbjct: 221 IVADRYTAVALLTCCGRLKTVLLGRSVHGVIVRRMDAGDNWLILVNALLDMYAKCGRMNA 280
Query: 363 THRVFNKFMKKDVITWNTMIAGYAKVGELELACSLFFQMPNRDLVSWNSLIAGYAQRDDY 542
RVF + +KD I+WNTM++G+A G L+LA F + P+RDL+SWN+L+AGYA+ +
Sbjct: 281 AERVFGEASEKDGISWNTMVSGFANAGMLDLASRFFSEAPSRDLISWNALLAGYARYKGF 340
Query: 543 ITVRSLFSDMIRDDINPDSVTMVNLVSAAAEIGALDEGRWVHGWLVRKKMEVGPFLGSAL 722
V LF DM+ +NPD VT V L+S AA G+L+ + +HGW+V++ FL SAL
Sbjct: 341 NEVMKLFHDMLASCVNPDKVTAVTLISVAAGKGSLNHAKSIHGWVVKQFGHQDAFLASAL 400
Query: 723 VDMYCKCGSVEKAFTVFQGVIKKDVTLWTTMISGLAYHGYGGHALELFSKMQKD-VMPNA 899
VDM+CKCG+V+ A+ VF+ + KDVTLWT MISGLA++G+G ALELF KMQ + + PN
Sbjct: 401 VDMHCKCGNVKVAYYVFEKALDKDVTLWTAMISGLAFNGHGTEALELFWKMQTEAIAPNG 460
Query: 900 VTFVAVLTACSHSGLVDQ 953
VT +AVL+ACSH+GL+D+
Sbjct: 461 VTLLAVLSACSHAGLLDE 478
Score = 85.1 bits (209), Expect = 4e-14
Identities = 71/246 (28%), Positives = 104/246 (42%), Gaps = 3/246 (1%)
Frame = +3
Query: 144 EVSKLFHKMVGIGFEPDEFTMLGLLMCCGRIEDARLGKSVHAWMERRALINDSNLILGNA 323
+ + ++ M+ PDE T L LL R+ G+ VHA + S + L N+
Sbjct: 110 QAAAVYRSMLASSVLPDEQTFLALLRSVERLS---AGRQVHAHVVVSGF--HSRVYLRNS 164
Query: 324 LLDMYVKCKELEITHRVFNKFMKKDVITWNTMIAGYAKVGELELACSLFFQMPNRDLVSW 503
L+ MY+ ++E +F + D ++ N M++GY G CSL
Sbjct: 165 LIKMYIDAGDVETAELMFRSALVLDTVSCNIMLSGYVNEG-----CSL------------ 207
Query: 504 NSLIAGYAQRDDYITVRSLFSDMIRDDINPDSVTMVNLVSAAAEIGALDEGRWVHGWLVR 683
F DM I D T V L++ + + GR VHG +VR
Sbjct: 208 --------------KALCFFRDMASRGIVADRYTAVALLTCCGRLKTVLLGRSVHGVIVR 253
Query: 684 KKMEVGP---FLGSALVDMYCKCGSVEKAFTVFQGVIKKDVTLWTTMISGLAYHGYGGHA 854
+M+ G L +AL+DMY KCG + A VF +KD W TM+SG A G A
Sbjct: 254 -RMDAGDNWLILVNALLDMYAKCGRMNAAERVFGEASEKDGISWNTMVSGFANAGMLDLA 312
Query: 855 LELFSK 872
FS+
Sbjct: 313 SRFFSE 318
>tpg|DAA51276.1| TPA: methyltransferase small domain protein [Zea mays]
Length = 601
Score = 312 bits (799), Expect = 1e-82
Identities = 154/318 (48%), Positives = 213/318 (66%), Gaps = 1/318 (0%)
Frame = +3
Query: 3 LQNSLLKMYLEHEELGPAHKLFEQMPTLDAVSFNIMIAGYAKMGCSLEVSKLFHKMVGIG 182
L+NSL+KMY++ ++ A +F LD VS NIM++GY GC+L+ F M G
Sbjct: 158 LRNSLIKMYIDAGDVETAELMFRSALVLDTVSCNIMLSGYVNEGCTLKALWFFRDMASRG 217
Query: 183 FEPDEFTMLGLLMCCGRIEDARLGKSVHAWMERRALINDSNLILGNALLDMYVKCKELEI 362
D++T + LL CCGR+++ +G+SVH + RR D LIL NALLDMY KC +
Sbjct: 218 IVVDQYTAVALLTCCGRLKNELIGRSVHGVIVRRMDAGDHGLILVNALLDMYAKCGRMNA 277
Query: 363 THRVFNKFMKKDVITWNTMIAGYAKVGELELACSLFFQMPNRDLVSWNSLIAGYAQRDDY 542
+F + +KD I+WNTM++G+ G L+LA F + P+RDL+SWN+L+AGYA+ +
Sbjct: 278 AKTIFGETGEKDAISWNTMVSGFVNAGMLDLASRFFSEAPSRDLISWNALLAGYARYKSF 337
Query: 543 ITVRSLFSDMIRDDINPDSVTMVNLVSAAAEIGALDEGRWVHGWLVRKKMEVGPFLGSAL 722
V LF DM+ +N D VT V L+SAA G+L+ + VHGW+V++ FL SAL
Sbjct: 338 NEVMKLFHDMVASCVNLDKVTAVTLISAATGKGSLNHAKSVHGWVVKEFDHQDAFLASAL 397
Query: 723 VDMYCKCGSVEKAFTVFQGVIKKDVTLWTTMISGLAYHGYGGHALELFSKMQKDVM-PNA 899
VDMYCKCG+V+ A+ VF+ + KDVTLWT MISGLA++G+G ALELF KMQ +V+ PN
Sbjct: 398 VDMYCKCGNVKTAYYVFEKALDKDVTLWTAMISGLAFNGHGTEALELFCKMQTEVVAPNG 457
Query: 900 VTFVAVLTACSHSGLVDQ 953
VT +AVL+ACSHSGL+D+
Sbjct: 458 VTLLAVLSACSHSGLLDE 475
Score = 87.8 bits (216), Expect = 6e-15
Identities = 79/279 (28%), Positives = 119/279 (42%), Gaps = 6/279 (2%)
Frame = +3
Query: 54 AHKLFEQM-PTLDAVSFNIMIAGYAKM--GCSLEVSKLFHKMVGIGFEPDEFTMLGLLMC 224
A LF+ P + +N+M++ A S + + L+ M+ PD+ T L LL
Sbjct: 74 AELLFQHFTPRPNLYIYNLMLSAAAARDSSSSTQAAALYRSMLASSVLPDQQTFLALLRS 133
Query: 225 CGRIEDARLGKSVHAWMERRALINDSNLILGNALLDMYVKCKELEITHRVFNKFMKKDVI 404
R+ G+ VHA + L S + L N+L+ MY+ ++E +F + D +
Sbjct: 134 VERLS---AGRQVHAHVVVSGL--HSRVYLRNSLIKMYIDAGDVETAELMFRSALVLDTV 188
Query: 405 TWNTMIAGYAKVGELELACSLFFQMPNRDLVSWNSLIAGYAQRDDYITVRSLFSDMIRDD 584
+ N M++GY G C+L W F DM
Sbjct: 189 SCNIMLSGYVNEG-----CTL--------KALW------------------FFRDMASRG 217
Query: 585 INPDSVTMVNLVSAAAEIGALDEGRWVHGWLVRKKMEVGP---FLGSALVDMYCKCGSVE 755
I D T V L++ + GR VHG +VR +M+ G L +AL+DMY KCG +
Sbjct: 218 IVVDQYTAVALLTCCGRLKNELIGRSVHGVIVR-RMDAGDHGLILVNALLDMYAKCGRMN 276
Query: 756 KAFTVFQGVIKKDVTLWTTMISGLAYHGYGGHALELFSK 872
A T+F +KD W TM+SG G A FS+
Sbjct: 277 AAKTIFGETGEKDAISWNTMVSGFVNAGMLDLASRFFSE 315