BLASTX nr result
ID: Paeonia22_contig00029253
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia22_contig00029253
(769 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P82412.1|RRP3_SPIOL RecName: Full=30S ribosomal protein 3, ch... 206 6e-51
ref|XP_004145640.1| PREDICTED: 30S ribosomal protein 3, chloropl... 204 2e-50
ref|XP_002283616.1| PREDICTED: 30S ribosomal protein 3, chloropl... 197 3e-48
emb|CBI33662.3| unnamed protein product [Vitis vinifera] 197 3e-48
gb|EXB97159.1| 30S ribosomal protein 3 [Morus notabilis] 197 4e-48
ref|XP_004304135.1| PREDICTED: 30S ribosomal protein 3, chloropl... 188 2e-45
ref|XP_007215996.1| hypothetical protein PRUPE_ppa011873mg [Prun... 188 2e-45
ref|XP_004234566.1| PREDICTED: 30S ribosomal protein 3, chloropl... 187 5e-45
ref|XP_006358052.1| PREDICTED: 30S ribosomal protein 3, chloropl... 186 8e-45
ref|XP_002315948.2| hypothetical protein POPTR_0010s13740g [Popu... 185 1e-44
ref|NP_001236243.1| uncharacterized protein LOC100306266 [Glycin... 182 1e-43
ref|XP_003620792.1| 30S ribosomal protein [Medicago truncatula] ... 181 2e-43
gb|AFK41643.1| unknown [Lotus japonicus] 181 3e-43
ref|XP_002311451.2| hypothetical protein POPTR_0008s11750g [Popu... 180 4e-43
ref|XP_007139145.1| hypothetical protein PHAVU_008G005100g [Phas... 180 6e-43
ref|XP_002530983.1| Plastid-specific 30S ribosomal protein 3, ch... 180 6e-43
gb|AFK46934.1| unknown [Lotus japonicus] 179 7e-43
ref|XP_007046269.1| Ribosomal protein PSRP-3/Ycf65 [Theobroma ca... 178 2e-42
ref|XP_004513065.1| PREDICTED: 30S ribosomal protein 3, chloropl... 178 2e-42
ref|XP_002529130.1| Plastid-specific 30S ribosomal protein 3, ch... 176 8e-42
>sp|P82412.1|RRP3_SPIOL RecName: Full=30S ribosomal protein 3, chloroplastic; AltName:
Full=Plastid-specific 30S ribosomal protein 3;
Short=PSRP-3; Flags: Precursor
gi|7578871|gb|AAF64163.1|AF239218_1 plastid-specific
ribosomal protein 3 precursor [Spinacia oleracea]
Length = 179
Score = 206 bits (525), Expect = 6e-51
Identities = 110/179 (61%), Positives = 123/179 (68%), Gaps = 2/179 (1%)
Frame = +3
Query: 105 MLSMSIQPNINASFNPSTFLSQKLVFKPFTAPVSFNSR--ISLAHSATLSESNFRKVKFX 278
MLSM++QPNINA PS + S KL KPF P N + S + L + N + F
Sbjct: 1 MLSMAVQPNINAIAKPSIYQSPKLSLKPFKTPAFANPKPFFSSPSFSQLKKKNNWSL-FV 59
Query: 279 XXXXXXXXXXXXXXSPVDSITQQDKEKLGVVVKTMQKPRIVLKFIWMEKNIGLGLDQMIT 458
+D +KEKL V+VK M KPR+VLKFIWMEKNIGL LDQ I
Sbjct: 60 APETISDVAIMGNEVDIDDDLLVNKEKLKVLVKPMDKPRLVLKFIWMEKNIGLALDQTIP 119
Query: 459 GHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQSGGNLA 635
GHGT+PLSPYYFWPRKDAWEELKVLLE+KPWISQKQMIILLNQATDIINLWQQSGGNLA
Sbjct: 120 GHGTVPLSPYYFWPRKDAWEELKVLLENKPWISQKQMIILLNQATDIINLWQQSGGNLA 178
>ref|XP_004145640.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Cucumis
sativus] gi|449484535|ref|XP_004156909.1| PREDICTED: 30S
ribosomal protein 3, chloroplastic-like [Cucumis
sativus]
Length = 192
Score = 204 bits (520), Expect = 2e-50
Identities = 113/192 (58%), Positives = 126/192 (65%), Gaps = 15/192 (7%)
Frame = +3
Query: 105 MLSMSIQ--PNINASFNPSTFLSQKLVFKPFTAPVSFNSRISLAH---------SATLSE 251
MLSM++Q PN+N FN S F +Q KPF P + R + + L
Sbjct: 2 MLSMAVQLQPNVNFCFNTSNFTAQT-ASKPFKLPFAVRQRTTASSCIPNFHTVFGLQLRR 60
Query: 252 SNFRKVKFXXXXXXXXXXXXXXXSPV----DSITQQDKEKLGVVVKTMQKPRIVLKFIWM 419
NFR + V DS++ KEKLGVVVK M+KPR+VLKFIWM
Sbjct: 61 QNFRTQEISASAAPIEAVEAASELLVADDSDSVSSPVKEKLGVVVKPMEKPRLVLKFIWM 120
Query: 420 EKNIGLGLDQMITGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDI 599
EKNIG+ LDQMI GHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDI
Sbjct: 121 EKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDI 180
Query: 600 INLWQQSGGNLA 635
INLWQQ GGNLA
Sbjct: 181 INLWQQGGGNLA 192
>ref|XP_002283616.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like isoform 1
[Vitis vinifera] gi|359488272|ref|XP_003633730.1|
PREDICTED: 30S ribosomal protein 3, chloroplastic-like
isoform 2 [Vitis vinifera]
Length = 176
Score = 197 bits (502), Expect = 3e-48
Identities = 108/184 (58%), Positives = 127/184 (69%), Gaps = 7/184 (3%)
Frame = +3
Query: 105 MLSMSIQPNINASFNPSTF-----LSQKLVFKPFTAPVSFNSRISLAHSATLSESNFRKV 269
MLSM++QPN NA+ TF + +L+FK A L+ +T S S ++
Sbjct: 2 MLSMAVQPNPNAALKSYTFPMSSNRNHRLMFKSSNA---------LSLYSTRSASTNLRL 52
Query: 270 KFXXXXXXXXXXXXXXXSPVDSITQQ--DKEKLGVVVKTMQKPRIVLKFIWMEKNIGLGL 443
+ +P +S++ D EKLGVVVK M+KPR+VLKFIWMEKNIG+ L
Sbjct: 53 RASPAPVVAVAVSEQSSAPQESLSASPLDVEKLGVVVKPMEKPRLVLKFIWMEKNIGVAL 112
Query: 444 DQMITGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQSG 623
DQ I GHGTIPLSPYYFWPRKDAWEE+KVLLESKPWISQKQMIILLNQATDIINLWQQSG
Sbjct: 113 DQAIPGHGTIPLSPYYFWPRKDAWEEIKVLLESKPWISQKQMIILLNQATDIINLWQQSG 172
Query: 624 GNLA 635
GNLA
Sbjct: 173 GNLA 176
>emb|CBI33662.3| unnamed protein product [Vitis vinifera]
Length = 175
Score = 197 bits (502), Expect = 3e-48
Identities = 108/184 (58%), Positives = 127/184 (69%), Gaps = 7/184 (3%)
Frame = +3
Query: 105 MLSMSIQPNINASFNPSTF-----LSQKLVFKPFTAPVSFNSRISLAHSATLSESNFRKV 269
MLSM++QPN NA+ TF + +L+FK A L+ +T S S ++
Sbjct: 1 MLSMAVQPNPNAALKSYTFPMSSNRNHRLMFKSSNA---------LSLYSTRSASTNLRL 51
Query: 270 KFXXXXXXXXXXXXXXXSPVDSITQQ--DKEKLGVVVKTMQKPRIVLKFIWMEKNIGLGL 443
+ +P +S++ D EKLGVVVK M+KPR+VLKFIWMEKNIG+ L
Sbjct: 52 RASPAPVVAVAVSEQSSAPQESLSASPLDVEKLGVVVKPMEKPRLVLKFIWMEKNIGVAL 111
Query: 444 DQMITGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQSG 623
DQ I GHGTIPLSPYYFWPRKDAWEE+KVLLESKPWISQKQMIILLNQATDIINLWQQSG
Sbjct: 112 DQAIPGHGTIPLSPYYFWPRKDAWEEIKVLLESKPWISQKQMIILLNQATDIINLWQQSG 171
Query: 624 GNLA 635
GNLA
Sbjct: 172 GNLA 175
>gb|EXB97159.1| 30S ribosomal protein 3 [Morus notabilis]
Length = 181
Score = 197 bits (500), Expect = 4e-48
Identities = 109/190 (57%), Positives = 126/190 (66%), Gaps = 14/190 (7%)
Frame = +3
Query: 108 LSMSIQPNINASFNPSTFLSQKLVFKP-------FTAPVSFNSRISLAHS-------ATL 245
+++ Q N NASF PST+ S+ P F P +F++ S + S AT
Sbjct: 1 MALQFQANWNASFKPSTWPSKTHFHIPKPIQTSLFAKPRTFSNMNSRSFSEFKPTPTATH 60
Query: 246 SESNFRKVKFXXXXXXXXXXXXXXXSPVDSITQQDKEKLGVVVKTMQKPRIVLKFIWMEK 425
S F + VD T +D EKLGVVVK + KPR++LKFIWMEK
Sbjct: 61 SSRKFA---------LSASAVAAEDTTVDDSTVEDTEKLGVVVKPVAKPRLILKFIWMEK 111
Query: 426 NIGLGLDQMITGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIIN 605
NIG+GLDQ+I GHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIIN
Sbjct: 112 NIGIGLDQVIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIIN 171
Query: 606 LWQQSGGNLA 635
LWQQSGGNL+
Sbjct: 172 LWQQSGGNLS 181
>ref|XP_004304135.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 182
Score = 188 bits (478), Expect = 2e-45
Identities = 109/187 (58%), Positives = 121/187 (64%), Gaps = 10/187 (5%)
Frame = +3
Query: 105 MLSMSIQPNINASFNPSTFLSQKL---------VFKPFTAPVSFNSRISLAHSAT-LSES 254
MLSM + A+ + ST + KL FKP S +S ++HS L
Sbjct: 1 MLSMGVGIECQATLSASTVVRPKLPHLLNNNTSTFKP-RRTTSPSSSFFISHSLPHLKLR 59
Query: 255 NFRKVKFXXXXXXXXXXXXXXXSPVDSITQQDKEKLGVVVKTMQKPRIVLKFIWMEKNIG 434
K+ SP D T EKLGVVVK M+KPR+VLKFIWMEKNIG
Sbjct: 60 TDFKLSAAAEALVAQETAADDVSPADDGT----EKLGVVVKPMEKPRLVLKFIWMEKNIG 115
Query: 435 LGLDQMITGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQ 614
+ LDQMI GHG+IPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQ
Sbjct: 116 IALDQMIPGHGSIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQ 175
Query: 615 QSGGNLA 635
QSGGNLA
Sbjct: 176 QSGGNLA 182
>ref|XP_007215996.1| hypothetical protein PRUPE_ppa011873mg [Prunus persica]
gi|462412146|gb|EMJ17195.1| hypothetical protein
PRUPE_ppa011873mg [Prunus persica]
Length = 192
Score = 188 bits (477), Expect = 2e-45
Identities = 111/196 (56%), Positives = 126/196 (64%), Gaps = 19/196 (9%)
Frame = +3
Query: 105 MLSMSI----QPNINASFNPSTFLSQK------------LVFKPFTAPVSFNSRISLAHS 236
MLSM + Q N+NAS QK L FKP T+ +F+ SL+
Sbjct: 1 MLSMGLGIECQANLNASVLRQKLPQQKHKLLLVNNNQRALNFKPRTS--NFSVSHSLSEL 58
Query: 237 ATLSESNFRKVKFXXXXXXXXXXXXXXXSPVDSITQQ---DKEKLGVVVKTMQKPRIVLK 407
R VK D++T + +KEKLGVVVK ++KPR+VLK
Sbjct: 59 KLRLTQTTRNVKLSAAAESLVAEETAAAD--DNLTTETPLEKEKLGVVVKPIEKPRLVLK 116
Query: 408 FIWMEKNIGLGLDQMITGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQ 587
FIWMEKNIG+ LDQMI GHG+IPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQ
Sbjct: 117 FIWMEKNIGIALDQMIPGHGSIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQ 176
Query: 588 ATDIINLWQQSGGNLA 635
ATDIINLWQQSGGNLA
Sbjct: 177 ATDIINLWQQSGGNLA 192
>ref|XP_004234566.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Solanum
lycopersicum]
Length = 176
Score = 187 bits (474), Expect = 5e-45
Identities = 105/180 (58%), Positives = 123/180 (68%), Gaps = 3/180 (1%)
Frame = +3
Query: 105 MLSMSIQPNIN---ASFNPSTFLSQKLVFKPFTAPVSFNSRISLAHSATLSESNFRKVKF 275
MLSM+ Q +N A + + F S K VF FT SF+ R ++ SA + N
Sbjct: 2 MLSMATQLTVNWVPAFSSQNQFFSPKFVF--FTKGQSFSRRSNV--SAIVPRRNLGGFAT 57
Query: 276 XXXXXXXXXXXXXXXSPVDSITQQDKEKLGVVVKTMQKPRIVLKFIWMEKNIGLGLDQMI 455
+ S + Q KEKLGV+VK ++KPR+VLKFIWMEKNIG+ LDQ+I
Sbjct: 58 SAAAALSFAEETSTRDSISSDSLQ-KEKLGVLVKPLEKPRLVLKFIWMEKNIGISLDQVI 116
Query: 456 TGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQSGGNLA 635
GHGTIPLSPYYFWPRKDAWEELKV+LESKPWISQKQ IILLNQATDIINLWQQSGG+LA
Sbjct: 117 PGHGTIPLSPYYFWPRKDAWEELKVMLESKPWISQKQAIILLNQATDIINLWQQSGGDLA 176
>ref|XP_006358052.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Solanum
tuberosum]
Length = 176
Score = 186 bits (472), Expect = 8e-45
Identities = 103/180 (57%), Positives = 123/180 (68%), Gaps = 3/180 (1%)
Frame = +3
Query: 105 MLSMSIQPNIN---ASFNPSTFLSQKLVFKPFTAPVSFNSRISLAHSATLSESNFRKVKF 275
M SM+ QP +N A + + F S K+V FT S++ R ++ SA + N
Sbjct: 2 MSSMATQPTVNWVPAFSSQNQFFSPKIV--SFTKGQSYSRRSNV--SAIVPRRNLGVFAT 57
Query: 276 XXXXXXXXXXXXXXXSPVDSITQQDKEKLGVVVKTMQKPRIVLKFIWMEKNIGLGLDQMI 455
+ S + Q KEKLGVVVK ++KPR+VLKFIWMEKNIG+ LDQ+I
Sbjct: 58 SAAAAVSFAEETSTHDSISSDSHQ-KEKLGVVVKPLEKPRLVLKFIWMEKNIGISLDQVI 116
Query: 456 TGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQSGGNLA 635
GHGTIPLSPYYFWPRKDAWEELKV+LESKPWIS+KQ IILLNQATDIINLWQQSGG+LA
Sbjct: 117 PGHGTIPLSPYYFWPRKDAWEELKVMLESKPWISEKQTIILLNQATDIINLWQQSGGDLA 176
>ref|XP_002315948.2| hypothetical protein POPTR_0010s13740g [Populus trichocarpa]
gi|550329750|gb|EEF02119.2| hypothetical protein
POPTR_0010s13740g [Populus trichocarpa]
Length = 189
Score = 185 bits (470), Expect = 1e-44
Identities = 100/186 (53%), Positives = 122/186 (65%), Gaps = 10/186 (5%)
Frame = +3
Query: 105 MLSMSIQPNINASFNPSTFLSQKLVFKPFTAPVSFNSRISLAHSATLSESNFRKV-KFXX 281
MLS++ Q + F S+ Q K F A S N + +L HS+T + ++V +
Sbjct: 1 MLSVAFQCGFSNVFTNSSLPCQTPSCKTFKATFSTNPKPNLIHSSTFLDRKRKRVSRNQR 60
Query: 282 XXXXXXXXXXXXXSPVD---------SITQQDKEKLGVVVKTMQKPRIVLKFIWMEKNIG 434
+P+D SI Q+ EK V+VK ++KPR+VLKFIWMEKNIG
Sbjct: 61 YTTFAAPEALTVETPIDTPPSTETEESIPTQETEKAEVLVKQVEKPRLVLKFIWMEKNIG 120
Query: 435 LGLDQMITGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQ 614
L LDQ+I GHGT+PLSPY+FWPRKDAWEELK LESKPWISQK+MIILLNQATDIINLWQ
Sbjct: 121 LALDQVIPGHGTVPLSPYFFWPRKDAWEELKATLESKPWISQKKMIILLNQATDIINLWQ 180
Query: 615 QSGGNL 632
QSGGNL
Sbjct: 181 QSGGNL 186
>ref|NP_001236243.1| uncharacterized protein LOC100306266 [Glycine max]
gi|255628049|gb|ACU14369.1| unknown [Glycine max]
Length = 158
Score = 182 bits (461), Expect = 1e-43
Identities = 100/185 (54%), Positives = 114/185 (61%), Gaps = 7/185 (3%)
Frame = +3
Query: 102 NMLSMSI-QPNINASFN------PSTFLSQKLVFKPFTAPVSFNSRISLAHSATLSESNF 260
N LSM++ PN+ +FN PS L L P P F+ +S A + +
Sbjct: 2 NSLSMALLHPNLLPTFNSNTLTFPSIKLKPSLSHVPSPTPTRFSLSVSAAETTAFAAP-- 59
Query: 261 RKVKFXXXXXXXXXXXXXXXSPVDSITQQDKEKLGVVVKTMQKPRIVLKFIWMEKNIGLG 440
EKLGVVVK +KPR+VLKFIWMEKNIG+
Sbjct: 60 --------------------------PTPQPEKLGVVVKPTEKPRLVLKFIWMEKNIGIA 93
Query: 441 LDQMITGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQS 620
LDQM+ GHGTIPLSPYYFWPRKDAWEELK LLE+KPWISQKQMIILLNQATDIINLWQQS
Sbjct: 94 LDQMVPGHGTIPLSPYYFWPRKDAWEELKELLENKPWISQKQMIILLNQATDIINLWQQS 153
Query: 621 GGNLA 635
GGNL+
Sbjct: 154 GGNLS 158
>ref|XP_003620792.1| 30S ribosomal protein [Medicago truncatula]
gi|217075300|gb|ACJ86010.1| unknown [Medicago
truncatula] gi|355495807|gb|AES77010.1| 30S ribosomal
protein [Medicago truncatula]
gi|388491518|gb|AFK33825.1| unknown [Medicago
truncatula]
Length = 161
Score = 181 bits (460), Expect = 2e-43
Identities = 85/94 (90%), Positives = 89/94 (94%)
Frame = +3
Query: 354 EKLGVVVKTMQKPRIVLKFIWMEKNIGLGLDQMITGHGTIPLSPYYFWPRKDAWEELKVL 533
+KLGVVVK KPR+VLKFIWMEKNIG+GLDQMI GHGTIPLSPYYFWPRKDAWEELK L
Sbjct: 67 QKLGVVVKPTDKPRLVLKFIWMEKNIGIGLDQMIPGHGTIPLSPYYFWPRKDAWEELKEL 126
Query: 534 LESKPWISQKQMIILLNQATDIINLWQQSGGNLA 635
LESKPWISQKQMIILLNQATDIINLWQQSGGNL+
Sbjct: 127 LESKPWISQKQMIILLNQATDIINLWQQSGGNLS 160
>gb|AFK41643.1| unknown [Lotus japonicus]
Length = 175
Score = 181 bits (458), Expect = 3e-43
Identities = 96/160 (60%), Positives = 110/160 (68%), Gaps = 9/160 (5%)
Frame = +3
Query: 183 KPFT-APVSFNSRISLA-HSATLSESNFRKVKFXXXXXXXXXXXXXXXSPVDSITQQDK- 353
KP T +P+ FN+ S + HS + S S+ S ++ +QD
Sbjct: 16 KPLTLSPIKFNTSSSFSSHSHSHSHSHSHLCPSNPSRFRLAVSAAETPSAAVAVAEQDDT 75
Query: 354 ------EKLGVVVKTMQKPRIVLKFIWMEKNIGLGLDQMITGHGTIPLSPYYFWPRKDAW 515
+KLGVVVK KPR+VLKFIWMEKNIG+ LDQ + GHGTIPLSPYYFWPRKDAW
Sbjct: 76 SLSPPPQKLGVVVKPTDKPRLVLKFIWMEKNIGIALDQAVPGHGTIPLSPYYFWPRKDAW 135
Query: 516 EELKVLLESKPWISQKQMIILLNQATDIINLWQQSGGNLA 635
EELK LLESKPWISQKQMIILLNQATDIINLWQQSGGNL+
Sbjct: 136 EELKELLESKPWISQKQMIILLNQATDIINLWQQSGGNLS 175
>ref|XP_002311451.2| hypothetical protein POPTR_0008s11750g [Populus trichocarpa]
gi|550332879|gb|EEE88818.2| hypothetical protein
POPTR_0008s11750g [Populus trichocarpa]
Length = 189
Score = 180 bits (457), Expect = 4e-43
Identities = 98/186 (52%), Positives = 119/186 (63%), Gaps = 10/186 (5%)
Frame = +3
Query: 105 MLSMSIQPNINASFNPSTFLSQKLVFKPFTAPVSFNSRISLAHSATLSESNFRKV-KFXX 281
MLSM+ Q +N F + + K F A +S N + + S+T + R V +
Sbjct: 1 MLSMAFQSGVNNVFTYYSLPCRTPSCKTFKATISVNPKPNPIRSSTFFDRERRHVSRNQR 60
Query: 282 XXXXXXXXXXXXXSPVD---------SITQQDKEKLGVVVKTMQKPRIVLKFIWMEKNIG 434
+P D SI Q+ EK +VVK ++KPR+VLKF+WMEKNIG
Sbjct: 61 YTTFAVPEALAAETPADAPPSNAAGESIPIQETEKAELVVKRVEKPRLVLKFVWMEKNIG 120
Query: 435 LGLDQMITGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQ 614
L LDQ+I GHGT+PLSPY+FWPRKDAWEELK LESKPWISQK+MIILLNQATDIINLWQ
Sbjct: 121 LALDQVIPGHGTVPLSPYFFWPRKDAWEELKATLESKPWISQKKMIILLNQATDIINLWQ 180
Query: 615 QSGGNL 632
QSGGNL
Sbjct: 181 QSGGNL 186
>ref|XP_007139145.1| hypothetical protein PHAVU_008G005100g [Phaseolus vulgaris]
gi|561012278|gb|ESW11139.1| hypothetical protein
PHAVU_008G005100g [Phaseolus vulgaris]
Length = 164
Score = 180 bits (456), Expect = 6e-43
Identities = 85/94 (90%), Positives = 88/94 (93%)
Frame = +3
Query: 354 EKLGVVVKTMQKPRIVLKFIWMEKNIGLGLDQMITGHGTIPLSPYYFWPRKDAWEELKVL 533
EKLGVVVK +KPRIVLKFIWMEKNIG+ LDQ I GHGTIPLSPYYFWPRKDAWEELK L
Sbjct: 71 EKLGVVVKATEKPRIVLKFIWMEKNIGIALDQTIPGHGTIPLSPYYFWPRKDAWEELKEL 130
Query: 534 LESKPWISQKQMIILLNQATDIINLWQQSGGNLA 635
LESKPWISQKQMIILLNQATDIINLWQQSGGNL+
Sbjct: 131 LESKPWISQKQMIILLNQATDIINLWQQSGGNLS 164
>ref|XP_002530983.1| Plastid-specific 30S ribosomal protein 3, chloroplast precursor,
putative [Ricinus communis] gi|223529435|gb|EEF31395.1|
Plastid-specific 30S ribosomal protein 3, chloroplast
precursor, putative [Ricinus communis]
Length = 174
Score = 180 bits (456), Expect = 6e-43
Identities = 103/185 (55%), Positives = 119/185 (64%), Gaps = 13/185 (7%)
Frame = +3
Query: 114 MSIQPNINASFNPSTFLSQKLVFKPFTAPVSF------NSRISLAHSATLSES--NFRKV 269
M+IQP I +S P SQ L KP F +S +S+ AT ++ + K+
Sbjct: 1 MAIQPKIKSSLKPVNLTSQTLFLKPLKISTPFISFQPKSSYLSIHSPATTLKTIQDLPKL 60
Query: 270 KFXXXXXXXXXXXXXXXSPVDSITQQD-----KEKLGVVVKTMQKPRIVLKFIWMEKNIG 434
K S DSI Q+ KEKLGVVVK M+KPRIVLK IWMEK IG
Sbjct: 61 KLSA-------------SAADSILSQEVSPTHKEKLGVVVKPMEKPRIVLKLIWMEKAIG 107
Query: 435 LGLDQMITGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQ 614
+GLDQ+I G GTIPLSPYYFWP++DAWE+LKVLLESKPWISQKQM ILLNQATDIINLWQ
Sbjct: 108 VGLDQVIPGFGTIPLSPYYFWPKEDAWEQLKVLLESKPWISQKQMHILLNQATDIINLWQ 167
Query: 615 QSGGN 629
SG N
Sbjct: 168 DSGCN 172
>gb|AFK46934.1| unknown [Lotus japonicus]
Length = 175
Score = 179 bits (455), Expect = 7e-43
Identities = 95/160 (59%), Positives = 110/160 (68%), Gaps = 9/160 (5%)
Frame = +3
Query: 183 KPFT-APVSFNSRISLA-HSATLSESNFRKVKFXXXXXXXXXXXXXXXSPVDSITQQDK- 353
+P T +P+ FN+ S + HS + S S+ S ++ +QD
Sbjct: 16 RPLTLSPIKFNTSSSFSSHSHSHSHSHSHLCPSNPSRFRLAVSAAETPSAAVAVAEQDDT 75
Query: 354 ------EKLGVVVKTMQKPRIVLKFIWMEKNIGLGLDQMITGHGTIPLSPYYFWPRKDAW 515
+KLGVVVK KPR+VLKFIWMEKNIG+ LDQ + GHGTIPLSPYYFWPRKDAW
Sbjct: 76 SLSPPPQKLGVVVKPTDKPRLVLKFIWMEKNIGIALDQAVPGHGTIPLSPYYFWPRKDAW 135
Query: 516 EELKVLLESKPWISQKQMIILLNQATDIINLWQQSGGNLA 635
EELK LLESKPWISQKQMIILLNQATDIINLWQQSGGNL+
Sbjct: 136 EELKELLESKPWISQKQMIILLNQATDIINLWQQSGGNLS 175
>ref|XP_007046269.1| Ribosomal protein PSRP-3/Ycf65 [Theobroma cacao]
gi|508710204|gb|EOY02101.1| Ribosomal protein
PSRP-3/Ycf65 [Theobroma cacao]
Length = 181
Score = 178 bits (451), Expect = 2e-42
Identities = 95/183 (51%), Positives = 116/183 (63%), Gaps = 6/183 (3%)
Frame = +3
Query: 105 MLSMSIQPNINASFNPSTFLSQKLVFKPFTAPVSFNSRISLAHSAT------LSESNFRK 266
MLSM+ Q ++N++ + QK K F + F ++ L S+T S +
Sbjct: 1 MLSMATQSSVNSTLTWHSLPYQKPALKSFNTAIFFKTKAGLRQSSTGLAKRITPTSRIER 60
Query: 267 VKFXXXXXXXXXXXXXXXSPVDSITQQDKEKLGVVVKTMQKPRIVLKFIWMEKNIGLGLD 446
+ T + EK VVVK ++K R+VLKFIWMEKNIGLGLD
Sbjct: 61 LTASAAPETLTAETSTETEIPSVTTSPETEK--VVVKQVEKSRLVLKFIWMEKNIGLGLD 118
Query: 447 QMITGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQSGG 626
Q+I GHGT+PLSPY+FWPRKDAWEELK LESKPWISQK+MIILLNQATDIINLWQQSGG
Sbjct: 119 QVIPGHGTVPLSPYFFWPRKDAWEELKATLESKPWISQKKMIILLNQATDIINLWQQSGG 178
Query: 627 NLA 635
NL+
Sbjct: 179 NLS 181
>ref|XP_004513065.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Cicer
arietinum]
Length = 164
Score = 178 bits (451), Expect = 2e-42
Identities = 81/94 (86%), Positives = 88/94 (93%)
Frame = +3
Query: 354 EKLGVVVKTMQKPRIVLKFIWMEKNIGLGLDQMITGHGTIPLSPYYFWPRKDAWEELKVL 533
+KLGVVVK KPR+VLKF+WMEKNIG+ LDQM+ GHGT+PLSPYYFWPRKDAWEELK L
Sbjct: 71 QKLGVVVKPTDKPRLVLKFVWMEKNIGIALDQMVPGHGTVPLSPYYFWPRKDAWEELKEL 130
Query: 534 LESKPWISQKQMIILLNQATDIINLWQQSGGNLA 635
LESKPWISQKQMIILLNQATDIINLWQQSGGNL+
Sbjct: 131 LESKPWISQKQMIILLNQATDIINLWQQSGGNLS 164
>ref|XP_002529130.1| Plastid-specific 30S ribosomal protein 3, chloroplast precursor,
putative [Ricinus communis] gi|223531409|gb|EEF33243.1|
Plastid-specific 30S ribosomal protein 3, chloroplast
precursor, putative [Ricinus communis]
Length = 180
Score = 176 bits (446), Expect = 8e-42
Identities = 96/186 (51%), Positives = 119/186 (63%), Gaps = 13/186 (6%)
Frame = +3
Query: 114 MSIQPNINASFNPSTFLSQKLVFKPFTAPVSFNSRISLAHSATLSESNFRKVKFXXXXXX 293
M+IQ +++ S + K + N +ISL +S+T+ + R +
Sbjct: 1 MAIQSGVSSILTYSPVPHRTPFCKSIKTSIFANPKISLLYSSTILDPKMRPIS------- 53
Query: 294 XXXXXXXXXSPVDSITQQDK-------------EKLGVVVKTMQKPRIVLKFIWMEKNIG 434
SP +++T +DK EK+ V VK ++KPR+VLKFIWMEKNIG
Sbjct: 54 RNERLTTFASP-EALTVEDKTSETEEPISDDIIEKVEVAVKQVEKPRLVLKFIWMEKNIG 112
Query: 435 LGLDQMITGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQ 614
L LDQ+I GHGTIPLSPY+FWPRKDAWEELK LESKPWISQK+MIILLNQATDIINLWQ
Sbjct: 113 LALDQVIPGHGTIPLSPYFFWPRKDAWEELKTTLESKPWISQKKMIILLNQATDIINLWQ 172
Query: 615 QSGGNL 632
QSGGNL
Sbjct: 173 QSGGNL 178