BLASTX nr result
ID: Paeonia22_contig00028970
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia22_contig00028970
(393 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007203318.1| hypothetical protein PRUPE_ppa019964mg, part... 207 9e-52
ref|XP_007219137.1| hypothetical protein PRUPE_ppa015965mg [Prun... 207 1e-51
ref|XP_007224256.1| hypothetical protein PRUPE_ppa018408mg, part... 205 5e-51
ref|XP_007226950.1| hypothetical protein PRUPE_ppa025194mg, part... 135 5e-30
gb|ABD63115.1| hypothetical protein 18.t00011 [Asparagus officin... 135 6e-30
ref|XP_007225525.1| hypothetical protein PRUPE_ppa026504mg, part... 120 3e-25
gb|ABD63147.1| Integrase core domain containing protein [Asparag... 120 3e-25
gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat... 85 1e-14
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum... 82 1e-13
ref|XP_006606762.1| PREDICTED: uncharacterized protein LOC102662... 81 1e-13
emb|CAN60440.1| hypothetical protein VITISV_032287 [Vitis vinifera] 81 1e-13
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] 81 1e-13
gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group] gi|... 81 1e-13
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 80 2e-13
gb|AAM94350.1| gag-pol polyprotein [Zea mays] 80 3e-13
ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group] g... 80 3e-13
gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare] 76 6e-12
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa... 75 7e-12
gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare] 75 7e-12
dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group] 75 9e-12
>ref|XP_007203318.1| hypothetical protein PRUPE_ppa019964mg, partial [Prunus persica]
gi|462398849|gb|EMJ04517.1| hypothetical protein
PRUPE_ppa019964mg, partial [Prunus persica]
Length = 1488
Score = 207 bits (528), Expect = 9e-52
Identities = 97/130 (74%), Positives = 111/130 (85%)
Frame = +3
Query: 3 KVVIRTKVHLLRGYNSKQPKTWDDSLPYLQFAFNRAAHGFTLKPPFEVCLGFLPQSPFDL 182
+VV RT VHLLRGYNSK PKTWD+SLPYLQFAFNRA HG TLK PFEVCLG+LPQSPFDL
Sbjct: 1239 EVVNRTMVHLLRGYNSKHPKTWDESLPYLQFAFNRAIHGSTLKSPFEVCLGYLPQSPFDL 1298
Query: 183 AFTVDSEMGSGKAEEEQGKAQRFLERINKIHAEVEAQLKKSQEKYKARHDKHRIPCTLEE 362
AFT+ + SGK EEE +A++FLERI KIH EVEAQLK+SQ++YKARHDKHR+PC +E
Sbjct: 1299 AFTMSDQPLSGKEEEEHIRAKKFLERIRKIHIEVEAQLKRSQQRYKARHDKHRVPCNFKE 1358
Query: 363 GDMVWPKLGK 392
GD+VW LGK
Sbjct: 1359 GDLVWLHLGK 1368
>ref|XP_007219137.1| hypothetical protein PRUPE_ppa015965mg [Prunus persica]
gi|462415599|gb|EMJ20336.1| hypothetical protein
PRUPE_ppa015965mg [Prunus persica]
Length = 1484
Score = 207 bits (527), Expect = 1e-51
Identities = 96/130 (73%), Positives = 111/130 (85%)
Frame = +3
Query: 3 KVVIRTKVHLLRGYNSKQPKTWDDSLPYLQFAFNRAAHGFTLKPPFEVCLGFLPQSPFDL 182
+VV RT VHLLRGYNSK PKTWD+SLPYLQFAFNRA HG TLK PFEVCLG+LPQSPFDL
Sbjct: 1237 EVVNRTMVHLLRGYNSKHPKTWDESLPYLQFAFNRAIHGSTLKSPFEVCLGYLPQSPFDL 1296
Query: 183 AFTVDSEMGSGKAEEEQGKAQRFLERINKIHAEVEAQLKKSQEKYKARHDKHRIPCTLEE 362
AFT+ + SGK EEE +A++FLER+ KIH EVEAQLK+SQ++YKARHDKHR+PC +E
Sbjct: 1297 AFTMSDQPLSGKEEEEHIRAKKFLERVRKIHIEVEAQLKRSQQRYKARHDKHRVPCNFKE 1356
Query: 363 GDMVWPKLGK 392
GD+VW LGK
Sbjct: 1357 GDLVWLHLGK 1366
>ref|XP_007224256.1| hypothetical protein PRUPE_ppa018408mg, partial [Prunus persica]
gi|462421192|gb|EMJ25455.1| hypothetical protein
PRUPE_ppa018408mg, partial [Prunus persica]
Length = 1440
Score = 205 bits (522), Expect = 5e-51
Identities = 95/130 (73%), Positives = 110/130 (84%)
Frame = +3
Query: 3 KVVIRTKVHLLRGYNSKQPKTWDDSLPYLQFAFNRAAHGFTLKPPFEVCLGFLPQSPFDL 182
+VV RT VHLLRGYNSK PKTWD+SLPYLQFAFNRA HG TLK PFEVCLG+LPQSPFDL
Sbjct: 1203 EVVNRTMVHLLRGYNSKHPKTWDESLPYLQFAFNRAIHGSTLKSPFEVCLGYLPQSPFDL 1262
Query: 183 AFTVDSEMGSGKAEEEQGKAQRFLERINKIHAEVEAQLKKSQEKYKARHDKHRIPCTLEE 362
AFT+ + SGK EEE +A++FLER+ KIH EVEAQLK+SQ++YKARHDKH +PC +E
Sbjct: 1263 AFTMSDQPLSGKEEEEHIRAKKFLERVRKIHIEVEAQLKRSQQRYKARHDKHHVPCNFKE 1322
Query: 363 GDMVWPKLGK 392
GD+VW LGK
Sbjct: 1323 GDLVWLHLGK 1332
>ref|XP_007226950.1| hypothetical protein PRUPE_ppa025194mg, partial [Prunus persica]
gi|462423886|gb|EMJ28149.1| hypothetical protein
PRUPE_ppa025194mg, partial [Prunus persica]
Length = 1347
Score = 135 bits (341), Expect = 5e-30
Identities = 63/86 (73%), Positives = 74/86 (86%)
Frame = +3
Query: 57 PKTWDDSLPYLQFAFNRAAHGFTLKPPFEVCLGFLPQSPFDLAFTVDSEMGSGKAEEEQG 236
PKTWD+SLPYLQFAFNRA HG TLK PFEVCLG+LPQSPFDLAFT+ + SGK EEE
Sbjct: 1149 PKTWDESLPYLQFAFNRAIHGSTLKSPFEVCLGYLPQSPFDLAFTMSDQPLSGKEEEEHI 1208
Query: 237 KAQRFLERINKIHAEVEAQLKKSQEK 314
+A++FLER+ KIH EVEAQLK+SQ++
Sbjct: 1209 RAKKFLERVRKIHIEVEAQLKRSQQR 1234
>gb|ABD63115.1| hypothetical protein 18.t00011 [Asparagus officinalis]
Length = 887
Score = 135 bits (340), Expect = 6e-30
Identities = 67/108 (62%), Positives = 79/108 (73%)
Frame = +3
Query: 3 KVVIRTKVHLLRGYNSKQPKTWDDSLPYLQFAFNRAAHGFTLKPPFEVCLGFLPQSPFDL 182
+VV RT +++LRGYN K PK WD+SLPYLQF FNRA HG + K PFE C GFLP SPFD+
Sbjct: 653 EVVNRTIIYMLRGYNFKHPKIWDESLPYLQFVFNRAIHGSSGKSPFETCYGFLPSSPFDI 712
Query: 183 AFTVDSEMGSGKAEEEQGKAQRFLERINKIHAEVEAQLKKSQEKYKAR 326
F+ ++ GK E+ AQRFLE+I IHA VEAQLKKSQ KYK R
Sbjct: 713 VFSSEA-TADGKEGSERQHAQRFLEKIAHIHATVEAQLKKSQSKYKER 759
>ref|XP_007225525.1| hypothetical protein PRUPE_ppa026504mg, partial [Prunus persica]
gi|462422461|gb|EMJ26724.1| hypothetical protein
PRUPE_ppa026504mg, partial [Prunus persica]
Length = 750
Score = 120 bits (300), Expect = 3e-25
Identities = 62/120 (51%), Positives = 70/120 (58%)
Frame = +3
Query: 3 KVVIRTKVHLLRGYNSKQPKTWDDSLPYLQFAFNRAAHGFTLKPPFEVCLGFLPQSPFDL 182
+VV RT VHLL GYNSK P+TWD+SLPYLQFAFNRA HG TLK PFEVCLG+LPQSPFDL
Sbjct: 609 EVVNRTMVHLLWGYNSKHPRTWDESLPYLQFAFNRAIHGSTLKSPFEVCLGYLPQSPFDL 668
Query: 183 AFTVDSEMGSGKAEEEQGKAQRFLERINKIHAEVEAQLKKSQEKYKARHDKHRIPCTLEE 362
AFT+ + ARHDKHR+PC +E
Sbjct: 669 AFTMSDQ--------------------------------------PARHDKHRVPCNFKE 690
>gb|ABD63147.1| Integrase core domain containing protein [Asparagus officinalis]
Length = 870
Score = 120 bits (300), Expect = 3e-25
Identities = 57/101 (56%), Positives = 73/101 (72%)
Frame = +3
Query: 90 QFAFNRAAHGFTLKPPFEVCLGFLPQSPFDLAFTVDSEMGSGKAEEEQGKAQRFLERINK 269
+F FNRA +G + K PFE C GFLP + FD+ F+ ++ GK E+ +AQ+FLE+I
Sbjct: 599 EFTFNRAIYGSSGKSPFETCYGFLPLNLFDIVFSGEAT-ADGKEGNERQRAQQFLEKIAH 657
Query: 270 IHAEVEAQLKKSQEKYKARHDKHRIPCTLEEGDMVWPKLGK 392
IHA VEAQLKKSQ KYK +HD+HR+PC +GDMVW KLGK
Sbjct: 658 IHASVEAQLKKSQAKYKVKHDQHRVPCNFGKGDMVWLKLGK 698
>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
Length = 1358
Score = 84.7 bits (208), Expect = 1e-14
Identities = 48/125 (38%), Positives = 69/125 (55%)
Frame = +3
Query: 3 KVVIRTKVHLLRGYNSKQPKTWDDSLPYLQFAFNRAAHGFTLKPPFEVCLGFLPQSPFDL 182
+VV RT LLR K K+W++SLPY++FA+NRA H T PFEV GF P +P DL
Sbjct: 1090 EVVNRTLTQLLRVVIRKNLKSWEESLPYVEFAYNRAIHSTTNMSPFEVAYGFNPLTPLDL 1149
Query: 183 AFTVDSEMGSGKAEEEQGKAQRFLERINKIHAEVEAQLKKSQEKYKARHDKHRIPCTLEE 362
+ + + + KAQ I + H++V AQ++K E+Y + +K R +
Sbjct: 1150 ---IPLHVNDKECVDAAKKAQ----GIREFHSKVRAQIEKKNEQYAQKANKGRKAIIFKP 1202
Query: 363 GDMVW 377
GD VW
Sbjct: 1203 GDWVW 1207
>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
aegilopoides]
Length = 1704
Score = 81.6 bits (200), Expect = 1e-13
Identities = 47/130 (36%), Positives = 66/130 (50%)
Frame = +3
Query: 3 KVVIRTKVHLLRGYNSKQPKTWDDSLPYLQFAFNRAAHGFTLKPPFEVCLGFLPQSPFDL 182
+VV RT +LR K W++ LP+++FA+NR+ H T PFE+ GFLP++P DL
Sbjct: 1411 EVVNRTLSTMLRAVLKNNKKMWEECLPHIEFAYNRSLHSTTKMCPFEIVYGFLPRAPIDL 1470
Query: 183 AFTVDSEMGSGKAEEEQGKAQRFLERINKIHAEVEAQLKKSQEKYKARHDKHRIPCTLEE 362
SE + A+E E I KIH + +++ KYK DK R
Sbjct: 1471 LPLPSSEKVNFDAKERS-------ELILKIHELTKENIERMNAKYKLARDKGRKHVVFAP 1523
Query: 363 GDMVWPKLGK 392
GD+VW L K
Sbjct: 1524 GDLVWLHLRK 1533
>ref|XP_006606762.1| PREDICTED: uncharacterized protein LOC102662828 [Glycine max]
Length = 612
Score = 81.3 bits (199), Expect = 1e-13
Identities = 49/130 (37%), Positives = 70/130 (53%)
Frame = +3
Query: 3 KVVIRTKVHLLRGYNSKQPKTWDDSLPYLQFAFNRAAHGFTLKPPFEVCLGFLPQSPFDL 182
+VV +T LLR K K+W+ LP+++FA+NR H T PFE+ GF P +P DL
Sbjct: 423 EVVNKTLGTLLRTVLKKNLKSWEACLPHVEFAYNRTVHSTTNCSPFEIVYGFNPLTPLDL 482
Query: 183 AFTVDSEMGSGKAEEEQGKAQRFLERINKIHAEVEAQLKKSQEKYKARHDKHRIPCTLEE 362
+ M K ++ Q KA E + K+H +V+AQ++K Y + +K R LE
Sbjct: 483 LPMPNITM--FKHKDAQAKA----EYVKKLHEQVKAQIEKKNASYARQANKSRKKVVLEP 536
Query: 363 GDMVWPKLGK 392
GD VW L K
Sbjct: 537 GDWVWVHLKK 546
>emb|CAN60440.1| hypothetical protein VITISV_032287 [Vitis vinifera]
Length = 893
Score = 81.3 bits (199), Expect = 1e-13
Identities = 46/130 (35%), Positives = 67/130 (51%)
Frame = +3
Query: 3 KVVIRTKVHLLRGYNSKQPKTWDDSLPYLQFAFNRAAHGFTLKPPFEVCLGFLPQSPFDL 182
+VV RT LLR K K W+D LP+++FA+NR+ H T PF++ GF P +P DL
Sbjct: 109 EVVNRTLSILLRTIIQKNLKNWEDCLPFIEFAYNRSVHSTTNFSPFKIVYGFNPLTPLDL 168
Query: 183 AFTVDSEMGSGKAEEEQGKAQRFLERINKIHAEVEAQLKKSQEKYKARHDKHRIPCTLEE 362
+EM S E++ E + K+H V ++K E+Y + +K R E
Sbjct: 169 LPLPVNEMTSLDGEKK-------AEMVKKLHESVRKHIEKKNEQYATKANKGRRQVLFEP 221
Query: 363 GDMVWPKLGK 392
GD VW + K
Sbjct: 222 GDWVWVHIRK 231
>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1713
Score = 81.3 bits (199), Expect = 1e-13
Identities = 48/130 (36%), Positives = 67/130 (51%)
Frame = +3
Query: 3 KVVIRTKVHLLRGYNSKQPKTWDDSLPYLQFAFNRAAHGFTLKPPFEVCLGFLPQSPFDL 182
+VV RT LLR K K W++ LP+++FA+NRA H T PFEV GF P SP DL
Sbjct: 1370 EVVNRTLSMLLRALIKKNLKEWEECLPHVEFAYNRAVHSTTNMCPFEVVYGFKPLSPIDL 1429
Query: 183 AFTVDSEMGSGKAEEEQGKAQRFLERINKIHAEVEAQLKKSQEKYKARHDKHRIPCTLEE 362
+ E +A + + KIH + + ++K + Y A +K+R T E
Sbjct: 1430 -------LPLPLQERSDMEASKRATYVKKIHEKTKEAIEKRSKYYAAWANKNRKKVTFEP 1482
Query: 363 GDMVWPKLGK 392
GD+VW L K
Sbjct: 1483 GDLVWVHLRK 1492
>gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group]
gi|52353557|gb|AAU44123.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 681
Score = 81.3 bits (199), Expect = 1e-13
Identities = 48/130 (36%), Positives = 67/130 (51%)
Frame = +3
Query: 3 KVVIRTKVHLLRGYNSKQPKTWDDSLPYLQFAFNRAAHGFTLKPPFEVCLGFLPQSPFDL 182
+VV RT LLR K K W++ LP+++FA+NRA H T PFEV GF P SP DL
Sbjct: 338 EVVNRTLSMLLRALIKKNLKEWEECLPHVEFAYNRAVHSTTNMCPFEVVYGFKPLSPIDL 397
Query: 183 AFTVDSEMGSGKAEEEQGKAQRFLERINKIHAEVEAQLKKSQEKYKARHDKHRIPCTLEE 362
+ E +A + + KIH + + ++K + Y A +K+R T E
Sbjct: 398 -------LPLPLQERSDMEASKRATYVKKIHEKTKEAIEKRSKYYAAWANKNRKKVTFEP 450
Query: 363 GDMVWPKLGK 392
GD+VW L K
Sbjct: 451 GDLVWVHLRK 460
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 80.5 bits (197), Expect = 2e-13
Identities = 45/130 (34%), Positives = 69/130 (53%)
Frame = +3
Query: 3 KVVIRTKVHLLRGYNSKQPKTWDDSLPYLQFAFNRAAHGFTLKPPFEVCLGFLPQSPFDL 182
+VV RT +LR K K W++ LP+++FA+NR+ H T PF++ G LP++P DL
Sbjct: 1367 EVVNRTLSTMLRAVLKKNIKMWEECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDL 1426
Query: 183 AFTVDSEMGSGKAEEEQGKAQRFLERINKIHAEVEAQLKKSQEKYKARHDKHRIPCTLEE 362
M +E+ A++ E + K+H + +++ KYK DK R T E
Sbjct: 1427 -------MPLPSSEKLNFDAKQRAELMLKLHETTKENIERMNAKYKFAGDKGRRELTFEP 1479
Query: 363 GDMVWPKLGK 392
GD+VW L K
Sbjct: 1480 GDLVWLHLRK 1489
>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
Length = 1618
Score = 80.1 bits (196), Expect = 3e-13
Identities = 45/130 (34%), Positives = 67/130 (51%)
Frame = +3
Query: 3 KVVIRTKVHLLRGYNSKQPKTWDDSLPYLQFAFNRAAHGFTLKPPFEVCLGFLPQSPFDL 182
+VV RT +LR K K W+D LP+++FA+NR+ H T PF++ G LP++P DL
Sbjct: 1370 EVVNRTLSTMLRAVLKKNIKMWEDCLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDL 1429
Query: 183 AFTVDSEMGSGKAEEEQGKAQRFLERINKIHAEVEAQLKKSQEKYKARHDKHRIPCTLEE 362
M +E+ A R E + K+H + +++ +YK DK R E
Sbjct: 1430 -------MPLPSSEKLNFDATRRAELMLKLHETTKENIERMNARYKFASDKGRKEINFEP 1482
Query: 363 GDMVWPKLGK 392
GD+VW L K
Sbjct: 1483 GDLVWLHLRK 1492
>ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group]
gi|113631773|dbj|BAF25454.1| Os09g0491900 [Oryza sativa
Japonica Group]
Length = 681
Score = 80.1 bits (196), Expect = 3e-13
Identities = 47/130 (36%), Positives = 66/130 (50%)
Frame = +3
Query: 3 KVVIRTKVHLLRGYNSKQPKTWDDSLPYLQFAFNRAAHGFTLKPPFEVCLGFLPQSPFDL 182
+VV RT LLR K K W++ LP+++FA+NRA H T PFEV GF P +P DL
Sbjct: 338 EVVNRTLSMLLRALIKKNLKEWEECLPHVEFAYNRAVHSTTNMCPFEVVYGFKPLAPIDL 397
Query: 183 AFTVDSEMGSGKAEEEQGKAQRFLERINKIHAEVEAQLKKSQEKYKARHDKHRIPCTLEE 362
+ E +A + + KIH + + ++K + Y A +K R T E
Sbjct: 398 -------LPLPLQERSDMEASKHATYVKKIHEKTKEAIEKRSKYYAAWANKDRKKVTFEP 450
Query: 363 GDMVWPKLGK 392
GD+VW L K
Sbjct: 451 GDLVWVHLRK 460
>gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]
Length = 1720
Score = 75.9 bits (185), Expect = 6e-12
Identities = 44/130 (33%), Positives = 66/130 (50%)
Frame = +3
Query: 3 KVVIRTKVHLLRGYNSKQPKTWDDSLPYLQFAFNRAAHGFTLKPPFEVCLGFLPQSPFDL 182
+VV R+ +LR K W++ LP+++FA+NR+ H T PFE+ GFLP++P DL
Sbjct: 1426 EVVNRSLSTMLRAVLKNNIKLWEECLPHIEFAYNRSLHSTTKMCPFEIVYGFLPRAPIDL 1485
Query: 183 AFTVDSEMGSGKAEEEQGKAQRFLERINKIHAEVEAQLKKSQEKYKARHDKHRIPCTLEE 362
SE + A+E E I K+H + +++ +YK DK R
Sbjct: 1486 LPIPSSEKVNFDAKER-------AELILKMHELTKENIERMNARYKLAGDKGRKHVVFAP 1538
Query: 363 GDMVWPKLGK 392
GD+VW L K
Sbjct: 1539 GDLVWLHLRK 1548
>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|15217296|gb|AAK92640.1|AC079634_1 Putative
retroelement [Oryza sativa Japonica Group]
gi|31431373|gb|AAP53161.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1708
Score = 75.5 bits (184), Expect = 7e-12
Identities = 43/130 (33%), Positives = 66/130 (50%)
Frame = +3
Query: 3 KVVIRTKVHLLRGYNSKQPKTWDDSLPYLQFAFNRAAHGFTLKPPFEVCLGFLPQSPFDL 182
+VV RT +LR K K W++ LP+++FA+NR+ H T K PFE+ G LP++P DL
Sbjct: 1395 EVVNRTLSTMLRAVLKKNIKMWEECLPHVEFAYNRSQHSTTKKCPFEIVYGLLPRAPIDL 1454
Query: 183 AFTVDSEMGSGKAEEEQGKAQRFLERINKIHAEVEAQLKKSQEKYKARHDKHRIPCTLEE 362
+ +E A+ E + K+H + +++ KYK K + E
Sbjct: 1455 -------LPLPTSERVNFDAKYHAELMLKLHETTKENIERMNIKYKLAGSKGKKHVAFEP 1507
Query: 363 GDMVWPKLGK 392
GD+VW L K
Sbjct: 1508 GDLVWLHLRK 1517
>gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]
Length = 1717
Score = 75.5 bits (184), Expect = 7e-12
Identities = 44/130 (33%), Positives = 66/130 (50%)
Frame = +3
Query: 3 KVVIRTKVHLLRGYNSKQPKTWDDSLPYLQFAFNRAAHGFTLKPPFEVCLGFLPQSPFDL 182
+VV R+ +LR K W++ LP+++FA+NR+ H T PFE+ GFLP++P DL
Sbjct: 1423 EVVNRSLSTMLRAVLKTNLKLWEECLPHIEFAYNRSLHSTTKMCPFEIVYGFLPRAPIDL 1482
Query: 183 AFTVDSEMGSGKAEEEQGKAQRFLERINKIHAEVEAQLKKSQEKYKARHDKHRIPCTLEE 362
SE + A+E E I K+H + +++ +YK DK R
Sbjct: 1483 LPIPSSEKVNFDAKER-------AELILKMHELTKENIERMNARYKLAGDKGRKHVVFAP 1535
Query: 363 GDMVWPKLGK 392
GD+VW L K
Sbjct: 1536 GDLVWLHLRK 1545
>dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]
Length = 1587
Score = 75.1 bits (183), Expect = 9e-12
Identities = 44/130 (33%), Positives = 66/130 (50%)
Frame = +3
Query: 3 KVVIRTKVHLLRGYNSKQPKTWDDSLPYLQFAFNRAAHGFTLKPPFEVCLGFLPQSPFDL 182
+VV RT +LR K K W++ LP+++FA+NR+ H T K PFE+ G LP++P DL
Sbjct: 1395 EVVNRTLSTMLRAVLKKNIKMWEECLPHVEFAYNRSQHSTTKKCPFEIVYGLLPRAPIDL 1454
Query: 183 AFTVDSEMGSGKAEEEQGKAQRFLERINKIHAEVEAQLKKSQEKYKARHDKHRIPCTLEE 362
SE + A+ E + K+H + +++ KYK K + E
Sbjct: 1455 LPLPTSERVNFDAKYR-------AELMLKLHETTKENIERMNIKYKLAGSKGKKHVAFEP 1507
Query: 363 GDMVWPKLGK 392
GD+VW L K
Sbjct: 1508 GDLVWLHLRK 1517