BLASTX nr result
ID: Paeonia22_contig00028465
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia22_contig00028465
(290 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa] 100 2e-19
gb|ACY72569.1| unknown [Oryza sativa Japonica Group] 94 2e-17
gb|AAB82754.1| retrofit [Oryza longistaminata] 92 7e-17
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|... 90 3e-16
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group... 90 3e-16
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group... 89 8e-16
emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera] 86 4e-15
emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera] 86 4e-15
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni... 86 5e-15
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p... 86 7e-15
gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group] 86 7e-15
gb|AAP94600.1| putative copia-like retrotransposon Hopscotch pol... 86 7e-15
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop... 86 7e-15
gb|ABA95367.1| retrotransposon protein, putative, Ty1-copia subc... 85 9e-15
gb|AAU90262.1| integrase core domain containing protein [Oryza s... 84 2e-14
gb|ABF99203.1| retrotransposon protein, putative, Ty1-copia subc... 84 2e-14
gb|AAK09230.1|AC084320_17 putative copia-like retrotransposon Ho... 84 2e-14
gb|ABA98728.2| retrotransposon protein, putative, Ty1-copia subc... 84 3e-14
gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group] 83 3e-14
gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subc... 83 4e-14
>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
Length = 1384
Score = 100 bits (250), Expect = 2e-19
Identities = 53/94 (56%), Positives = 66/94 (70%)
Frame = -2
Query: 289 LRSYNTNKLQLRSKLCVFLGYSLHHQGYRCLDPSTGRVYLSKHVVFDEKQFPFKTLHRTE 110
LR YN++KLQLRSK CVFLGYSL+HQGYRC DPS+GRVYLS+HV+FDE FPF TE
Sbjct: 634 LRPYNSSKLQLRSKRCVFLGYSLNHQGYRCFDPSSGRVYLSRHVLFDESSFPF-----TE 688
Query: 109 ISLPSLSNFLIDTQSPRNSSQSSPVFHPHDHISP 8
+L SN ID+ + ++ P+ P +SP
Sbjct: 689 PAL--TSNSSIDSSTDQSILIFGPLSGPSPSLSP 720
>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
Length = 1436
Score = 94.0 bits (232), Expect = 2e-17
Identities = 54/104 (51%), Positives = 70/104 (67%), Gaps = 12/104 (11%)
Frame = -2
Query: 289 LRSYNTNKLQLRSKLCVFLGYSLHHQGYRCLDPSTGRVYLSKHVVFDEKQFPFKTLH--- 119
LR YNT+KLQ RSK CVFLG+S HH+G++CLD S+GRVY+S+ VVFDE FPF TLH
Sbjct: 690 LRPYNTHKLQFRSKQCVFLGFSTHHKGFKCLDVSSGRVYISRDVVFDENIFPFSTLHSNA 749
Query: 118 ----RTEISL--PSLSNFLIDTQSPRNSSQSSPVFH---PHDHI 14
R+EI L SL+N+ +T S + +PV + P D+I
Sbjct: 750 GARLRSEILLLPSSLTNY--ETTSTGGTHVVAPVANTPIPSDNI 791
>gb|AAB82754.1| retrofit [Oryza longistaminata]
Length = 1445
Score = 92.0 bits (227), Expect = 7e-17
Identities = 52/94 (55%), Positives = 66/94 (70%), Gaps = 9/94 (9%)
Frame = -2
Query: 289 LRSYNTNKLQLRSKLCVFLGYSLHHQGYRCLDPSTGRVYLSKHVVFDEKQFPFKTLH--- 119
LR YNT+KLQ RSK CVFLG+S HH+G++CLD S+GRVY+S+ VVFDE FPF TLH
Sbjct: 690 LRPYNTHKLQFRSKQCVFLGFSTHHKGFKCLDVSSGRVYISRDVVFDENVFPFSTLHSNA 749
Query: 118 ----RTEI-SLPS-LSNFLIDTQSPRNSSQSSPV 35
R+EI LPS L+N+ +T S + +PV
Sbjct: 750 GARLRSEILLLPSPLTNY--NTASAGGTHVVAPV 781
>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1447
Score = 90.1 bits (222), Expect = 3e-16
Identities = 47/83 (56%), Positives = 57/83 (68%), Gaps = 7/83 (8%)
Frame = -2
Query: 289 LRSYNTNKLQLRSKLCVFLGYSLHHQGYRCLDPSTGRVYLSKHVVFDEKQFPFKTLH--- 119
LR YNT+KLQ RSK C FLGYS H+G++CLDPSTGRVY+S+ V+FDE FPF LH
Sbjct: 690 LRPYNTHKLQFRSKQCTFLGYSTLHKGFKCLDPSTGRVYISRDVIFDETNFPFAKLHTNA 749
Query: 118 ----RTEISLPSLSNFLIDTQSP 62
R+EI L S+ L T +P
Sbjct: 750 GARLRSEILLLP-SHLLNPTSNP 771
>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108708884|gb|ABF96679.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1437
Score = 90.1 bits (222), Expect = 3e-16
Identities = 51/95 (53%), Positives = 60/95 (63%), Gaps = 8/95 (8%)
Frame = -2
Query: 289 LRSYNTNKLQLRSKLCVFLGYSLHHQGYRCLDPSTGRVYLSKHVVFDEKQFPFKTLH--- 119
LR YN +KLQ RS C FLGYS H+G++CLDPSTGRVY+S+ VVFDE QFPF LH
Sbjct: 688 LRPYNKHKLQFRSTTCTFLGYSTLHKGFKCLDPSTGRVYISRDVVFDETQFPFTKLHPNV 747
Query: 118 ----RTEISL-PSLSNFLIDTQSPRNSSQSSPVFH 29
R EI+L P L+ L PR Q S V +
Sbjct: 748 GAKLRAEIALVPELAASL-----PRGLQQISSVIN 777
>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1431
Score = 88.6 bits (218), Expect = 8e-16
Identities = 53/105 (50%), Positives = 64/105 (60%), Gaps = 9/105 (8%)
Frame = -2
Query: 289 LRSYNTNKLQLRSKLCVFLGYSLHHQGYRCLDPSTGRVYLSKHVVFDEKQFPFKTLH--- 119
LR YNT+KLQ RSK CVFLG+S H+G++CLD STGRVY+S+ V FDE+ FPF LH
Sbjct: 677 LRPYNTHKLQFRSKQCVFLGFSNIHKGFKCLDVSTGRVYVSRDVTFDEQVFPFANLHPNA 736
Query: 118 ----RTEISL--PSLSNFLIDTQSPRNSSQSSPVFHPHDHISPIS 2
R EISL P+L N + S Q HDH+ IS
Sbjct: 737 GARLRAEISLLPPTLIN-------EKTSDQGGE--EHHDHLFNIS 772
>emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]
Length = 1402
Score = 86.3 bits (212), Expect = 4e-15
Identities = 39/53 (73%), Positives = 43/53 (81%)
Frame = -2
Query: 289 LRSYNTNKLQLRSKLCVFLGYSLHHQGYRCLDPSTGRVYLSKHVVFDEKQFPF 131
+R YN +KLQ RS CVFLGYSLHH+GY CLD TGRVY+S HVVFDE QFPF
Sbjct: 717 IRPYNNHKLQYRSLKCVFLGYSLHHKGYLCLDNLTGRVYVSPHVVFDETQFPF 769
>emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]
Length = 1365
Score = 86.3 bits (212), Expect = 4e-15
Identities = 39/53 (73%), Positives = 43/53 (81%)
Frame = -2
Query: 289 LRSYNTNKLQLRSKLCVFLGYSLHHQGYRCLDPSTGRVYLSKHVVFDEKQFPF 131
+R YN +KLQ RS CVFLGYSLHH+GY CLD TGRVY+S HVVFDE QFPF
Sbjct: 667 IRPYNNHKLQYRSLKCVFLGYSLHHKGYLCLDNLTGRVYVSPHVVFDETQFPF 719
>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|108706314|gb|ABF94109.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1247
Score = 85.9 bits (211), Expect = 5e-15
Identities = 38/57 (66%), Positives = 44/57 (77%)
Frame = -2
Query: 289 LRSYNTNKLQLRSKLCVFLGYSLHHQGYRCLDPSTGRVYLSKHVVFDEKQFPFKTLH 119
LR YN KLQ RSK C FLGYS H+G++CLDPSTGRVY+S V+FDE FPF +LH
Sbjct: 488 LRPYNARKLQFRSKQCTFLGYSPLHKGFKCLDPSTGRVYISHDVIFDENVFPFASLH 544
>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
sativa Japonica Group]
Length = 1448
Score = 85.5 bits (210), Expect = 7e-15
Identities = 38/57 (66%), Positives = 46/57 (80%)
Frame = -2
Query: 289 LRSYNTNKLQLRSKLCVFLGYSLHHQGYRCLDPSTGRVYLSKHVVFDEKQFPFKTLH 119
L YNT+KLQ RSK CVFLG+S HH+G++ LD S+GRVY+S+ VVFDE FPF TLH
Sbjct: 693 LHPYNTHKLQFRSKQCVFLGFSTHHKGFKFLDVSSGRVYISRDVVFDENVFPFSTLH 749
>gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]
Length = 1448
Score = 85.5 bits (210), Expect = 7e-15
Identities = 38/57 (66%), Positives = 46/57 (80%)
Frame = -2
Query: 289 LRSYNTNKLQLRSKLCVFLGYSLHHQGYRCLDPSTGRVYLSKHVVFDEKQFPFKTLH 119
L YNT+KLQ RSK CVFLG+S HH+G++ LD S+GRVY+S+ VVFDE FPF TLH
Sbjct: 693 LHPYNTHKLQFRSKQCVFLGFSTHHKGFKFLDVSSGRVYISRDVVFDENVFPFSTLH 749
>gb|AAP94600.1| putative copia-like retrotransposon Hopscotch polyprotein [Zea
mays]
Length = 969
Score = 85.5 bits (210), Expect = 7e-15
Identities = 45/77 (58%), Positives = 54/77 (70%), Gaps = 9/77 (11%)
Frame = -2
Query: 289 LRSYNTNKLQLRSKLCVFLGYSLHHQGYRCLDPSTGRVYLSKHVVFDEKQFPFKTLH--- 119
LR YN++KLQ RSK CVFLGYS H+G++CLD STGRVY+S+ V FDE FPF +LH
Sbjct: 537 LRPYNSHKLQFRSKQCVFLGYSSLHKGFKCLDVSTGRVYVSRDVTFDENFFPFASLHSNA 596
Query: 118 ----RTEISL--PSLSN 86
R+EI L P L N
Sbjct: 597 GARLRSEIQLLSPDLLN 613
>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea
mays]
Length = 1313
Score = 85.5 bits (210), Expect = 7e-15
Identities = 45/77 (58%), Positives = 54/77 (70%), Gaps = 9/77 (11%)
Frame = -2
Query: 289 LRSYNTNKLQLRSKLCVFLGYSLHHQGYRCLDPSTGRVYLSKHVVFDEKQFPFKTLH--- 119
LR YN++KLQ RSK CVFLGYS H+G++CLD STGRVY+S+ V FDE FPF +LH
Sbjct: 537 LRPYNSHKLQFRSKQCVFLGYSSLHKGFKCLDVSTGRVYVSRDVTFDENFFPFASLHSNA 596
Query: 118 ----RTEISL--PSLSN 86
R+EI L P L N
Sbjct: 597 GARLRSEIQLLSPDLLN 613
>gb|ABA95367.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 807
Score = 85.1 bits (209), Expect = 9e-15
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 7/101 (6%)
Frame = -2
Query: 289 LRSYNTNKLQLRSKLCVFLGYSLHHQGYRCLDPSTGRVYLSKHVVFDEKQFPFKTLH--- 119
LR YN +KLQ RSK CVFL YS H+G++CLD STGRVY+S+ V+FDE F F TLH
Sbjct: 653 LRPYNNHKLQFRSKQCVFLDYSHLHKGFKCLDVSTGRVYISRDVIFDENVFSFSTLHENS 712
Query: 118 ----RTEISLPSLSNFLIDTQSPRNSSQSSPVFHPHDHISP 8
R+EISL L + L+ + + H H + P
Sbjct: 713 GARLRSEISL--LPSSLLPLSHSGGEQSTDHMSHLHTNTVP 751
>gb|AAU90262.1| integrase core domain containing protein [Oryza sativa Japonica
Group] gi|108710062|gb|ABF97857.1| retrotransposon
protein, putative, Ty1-copia subclass, expressed [Oryza
sativa Japonica Group]
Length = 1021
Score = 84.3 bits (207), Expect = 2e-14
Identities = 45/93 (48%), Positives = 57/93 (61%)
Frame = -2
Query: 289 LRSYNTNKLQLRSKLCVFLGYSLHHQGYRCLDPSTGRVYLSKHVVFDEKQFPFKTLHRTE 110
LR YN KLQ RSK CVFLGYS H+G++CLD +TGRVY+S+ VVFDE FPF LH +
Sbjct: 605 LRPYNNRKLQFRSKQCVFLGYSNIHKGFKCLDVATGRVYISRDVVFDENIFPFSQLH-SN 663
Query: 109 ISLPSLSNFLIDTQSPRNSSQSSPVFHPHDHIS 11
S L+ + N +S +DH+S
Sbjct: 664 AGARLRSEILLLPSTLLNPEIASRGMQVNDHMS 696
>gb|ABF99203.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1177
Score = 84.0 bits (206), Expect = 2e-14
Identities = 41/95 (43%), Positives = 59/95 (62%)
Frame = -2
Query: 289 LRSYNTNKLQLRSKLCVFLGYSLHHQGYRCLDPSTGRVYLSKHVVFDEKQFPFKTLHRTE 110
LR YNT+KLQ RSK CVFLG+S H+G++CL+ +TG+VY+S+ V FDE++FPF L
Sbjct: 567 LRPYNTHKLQFRSKQCVFLGFSNLHKGFKCLEVATGQVYISRDVTFDEQEFPFSKLQPNA 626
Query: 109 ISLPSLSNFLIDTQSPRNSSQSSPVFHPHDHISPI 5
+ L+ ++S V H +DH+ I
Sbjct: 627 GARLRAEISLLPADLTSHASDQGGVAHSNDHMHNI 661
>gb|AAK09230.1|AC084320_17 putative copia-like retrotransposon Hopscotch polyprotein [Oryza
sativa Japonica Group]
gi|14718304|gb|AAK72882.1|AC091123_1 putative gag-pol
protein [Oryza sativa Japonica Group]
Length = 1219
Score = 84.0 bits (206), Expect = 2e-14
Identities = 41/95 (43%), Positives = 59/95 (62%)
Frame = -2
Query: 289 LRSYNTNKLQLRSKLCVFLGYSLHHQGYRCLDPSTGRVYLSKHVVFDEKQFPFKTLHRTE 110
LR YNT+KLQ RSK CVFLG+S H+G++CL+ +TG+VY+S+ V FDE++FPF L
Sbjct: 678 LRPYNTHKLQFRSKQCVFLGFSNLHKGFKCLEVATGQVYISRDVTFDEQEFPFSKLQPNA 737
Query: 109 ISLPSLSNFLIDTQSPRNSSQSSPVFHPHDHISPI 5
+ L+ ++S V H +DH+ I
Sbjct: 738 GARLRAEISLLPADLTSHASDQGGVAHSNDHMHNI 772
>gb|ABA98728.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1016
Score = 83.6 bits (205), Expect = 3e-14
Identities = 38/57 (66%), Positives = 44/57 (77%)
Frame = -2
Query: 289 LRSYNTNKLQLRSKLCVFLGYSLHHQGYRCLDPSTGRVYLSKHVVFDEKQFPFKTLH 119
LR YN KL+ RSK CVFLGYS H+G++CLD STGRVY+S+ VVFDE FPF LH
Sbjct: 301 LRPYNKRKLEFRSKQCVFLGYSNIHKGFKCLDVSTGRVYISRDVVFDENVFPFSKLH 357
>gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1210
Score = 83.2 bits (204), Expect = 3e-14
Identities = 44/77 (57%), Positives = 53/77 (68%), Gaps = 9/77 (11%)
Frame = -2
Query: 289 LRSYNTNKLQLRSKLCVFLGYSLHHQGYRCLDPSTGRVYLSKHVVFDEKQFPFKTLH--- 119
LR YN KLQ RSK CVFLGYS H+G++CLD + GRVY+S+ VVFDE FPF +LH
Sbjct: 681 LRPYNARKLQFRSKQCVFLGYSNLHKGFKCLDVAAGRVYISRDVVFDENVFPFASLHSNA 740
Query: 118 ----RTEISL--PSLSN 86
R+EI L P+L N
Sbjct: 741 GARLRSEILLLPPTLLN 757
>gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1478
Score = 82.8 bits (203), Expect = 4e-14
Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 7/95 (7%)
Frame = -2
Query: 289 LRSYNTNKLQLRSKLCVFLGYSLHHQGYRCLDPSTGRVYLSKHVVFDEKQFPFKTLH--- 119
LR YN +KLQ RSK CVFLG+S H+G++CL+ STGR+Y+S+ VVFDE FPF LH
Sbjct: 717 LRPYNNHKLQFRSKRCVFLGFSTMHKGFKCLEVSTGRIYISRDVVFDENIFPFTELHANA 776
Query: 118 ----RTEISLPSLSNFLIDTQSPRNSSQSSPVFHP 26
R+EI + + L +S N PV +P
Sbjct: 777 GARLRSEIDILT-PELLGPIRSVGNEQCMHPVTNP 810