BLASTX nr result
ID: Paeonia22_contig00026402
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia22_contig00026402
(842 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. ... 413 e-113
gb|ABW74585.1| pol polyprotein [Boechera divaricarpa] 382 e-103
gb|AAC95173.1| putative retroelement pol polyprotein [Arabidopsi... 341 2e-91
pir||E84492 probable retroelement pol polyprotein [imported] - A... 338 2e-90
gb|AAM15219.1| putative retroelement pol polyprotein [Arabidopsi... 338 2e-90
dbj|BAB02990.1| retroelement pol polyprotein-like [Arabidopsis t... 317 3e-84
gb|AAD32898.1| putative retroelement pol polyprotein [Arabidopsi... 286 9e-75
emb|CAE04422.2| OSJNBb0040D15.12 [Oryza sativa Japonica Group] 278 2e-72
ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group] g... 278 2e-72
gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indi... 278 2e-72
gb|ABF96448.1| retrotransposon protein, putative, Ty1-copia subc... 275 2e-71
gb|AAP12935.1| retrotransposon protein, putative, unclassified [... 275 2e-71
gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]... 273 8e-71
gb|AAF67366.1| Hypothetical protein T32B20.i [Arabidopsis thaliana] 268 2e-69
gb|ABB47537.2| retrotransposon protein, putative, unclassified [... 267 4e-69
gb|AAK50412.1|AC021891_13 Putative retroelement [Oryza sativa Ja... 267 4e-69
gb|AAF63110.1|AC006423_11 putative retroelement pol polyprotein ... 260 4e-67
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi... 259 7e-67
emb|CAD41367.2| OSJNBa0088A01.6 [Oryza sativa Japonica Group] 259 1e-66
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi... 258 3e-66
>gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. botrytis]
Length = 1239
Score = 413 bits (1062), Expect = e-113
Identities = 193/280 (68%), Positives = 234/280 (83%)
Frame = -3
Query: 840 MHEVVLLNEEKIIPRNYEIKEGEGKVWYLDNGASNHMTGNRAFFSELNEKIKGKVKFGDG 661
MHEVV LNEE ++P+ E + + WYLDNGASNHMTG+++FFSELNE IKG+VKFGDG
Sbjct: 175 MHEVVFLNEESVMPKKLEQNKTDDGNWYLDNGASNHMTGDKSFFSELNESIKGRVKFGDG 234
Query: 660 SCIDIGGKGSILFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCDVRMKQDYLTVHD 481
SC+ I GKGSI+F++KT EQKL+ +IYYIPEL+SNILSLGQATE GCDVRMK +YLT+ D
Sbjct: 235 SCVKINGKGSIIFEAKTGEQKLLTNIYYIPELRSNILSLGQATEQGCDVRMKDNYLTLRD 294
Query: 480 PSGRLLVKVTRSPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVSFKTMRSMSQQEM 301
PSGRLLVKV RSPNRLYKVSL++GKP CL + +E WRWHARLGH++FKT++ M++ EM
Sbjct: 295 PSGRLLVKVLRSPNRLYKVSLKVGKPSCLLTKINEEPWRWHARLGHINFKTIKDMAKLEM 354
Query: 300 VQGLPKIKGENRICESCLVGKQVRGSFPKAATFRATKSLELLHADLCGPISPPTIANNRY 121
V+GLP+I E ++CESCLVGKQ R SFP A R+++ LELLHADLCGPISP T+A NRY
Sbjct: 355 VRGLPEINEEKKLCESCLVGKQTRNSFPSATPHRSSQVLELLHADLCGPISPSTLAQNRY 414
Query: 120 VFVIIDDFSRYMWTILMKEKGEAFGKFKTFRQLVEKEFEK 1
+FVIIDD +RYMW+IL+KEK E F KFKTF+ LVEKE K
Sbjct: 415 IFVIIDDNTRYMWSILLKEKSEVFEKFKTFKALVEKEVNK 454
>gb|ABW74585.1| pol polyprotein [Boechera divaricarpa]
Length = 551
Score = 382 bits (980), Expect = e-103
Identities = 175/242 (72%), Positives = 210/242 (86%)
Frame = -3
Query: 840 MHEVVLLNEEKIIPRNYEIKEGEGKVWYLDNGASNHMTGNRAFFSELNEKIKGKVKFGDG 661
+HE+V LNEEKIIP+ YE K E WYLDNGASNHMTG R++F+ELNE IKGKVKFGDG
Sbjct: 306 LHEIVFLNEEKIIPKAYETKNEEEGTWYLDNGASNHMTGVRSYFAELNENIKGKVKFGDG 365
Query: 660 SCIDIGGKGSILFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCDVRMKQDYLTVHD 481
SC+DIGGKGSILFQ KT EQ+LV DIYYIP+LKSNILSLGQATE GCDVR++ DYLT+HD
Sbjct: 366 SCVDIGGKGSILFQGKTGEQQLVIDIYYIPDLKSNILSLGQATEFGCDVRIRHDYLTLHD 425
Query: 480 PSGRLLVKVTRSPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVSFKTMRSMSQQEM 301
P GRLLVKV RSPNRLYK++L+IGKP+CLH +E +TWRWHARLGH++FKT++ MS+QEM
Sbjct: 426 PHGRLLVKVIRSPNRLYKINLKIGKPICLHTKIEGDTWRWHARLGHINFKTIKDMSKQEM 485
Query: 300 VQGLPKIKGENRICESCLVGKQVRGSFPKAATFRATKSLELLHADLCGPISPPTIANNRY 121
V GLP+I+ E ++CE CLVGKQ R +FPK +RA++ LELL+ADLCGPISPP++A NRY
Sbjct: 486 VYGLPEIEEEKQVCEPCLVGKQTRQAFPKTTLYRASRVLELLYADLCGPISPPSLAQNRY 545
Query: 120 VF 115
+F
Sbjct: 546 IF 547
>gb|AAC95173.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1200
Score = 341 bits (874), Expect = 2e-91
Identities = 166/278 (59%), Positives = 207/278 (74%), Gaps = 1/278 (0%)
Frame = -3
Query: 840 MHEVVLLNEEKIIPRNYEIKEG-EGKVWYLDNGASNHMTGNRAFFSELNEKIKGKVKFGD 664
MHEVV LNE + N EI E K WYLDNGASNHMTGNR +F +L+E + GKVKFGD
Sbjct: 233 MHEVVYLNEGNM---NLEIYEACSDKAWYLDNGASNHMTGNRDWFCKLDEMVTGKVKFGD 289
Query: 663 GSCIDIGGKGSILFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCDVRMKQDYLTVH 484
S IDI GKGSILF +K E K + ++YYIP+LKSNI+SLGQATEAGCDVR+K +YLT+H
Sbjct: 290 DSRIDIRGKGSILFLTKNGEPKTLANVYYIPDLKSNIISLGQATEAGCDVRLKDNYLTLH 349
Query: 483 DPSGRLLVKVTRSPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVSFKTMRSMSQQE 304
D G LLVK TRS NRLY+V L++ CL ++ +WHARLGH++ +T+++M +E
Sbjct: 350 DRDGNLLVKATRSRNRLYRVELKVKNTKCLQLAALNDLTKWHARLGHINLETIKAMVTKE 409
Query: 303 MVQGLPKIKGENRICESCLVGKQVRGSFPKAATFRATKSLELLHADLCGPISPPTIANNR 124
V G+P E IC SC++GKQ R FPKA T+RA++ LEL+H DLCGPISPPT A R
Sbjct: 410 FVIGIPSAPKEKEICASCMLGKQARQVFPKATTYRASQILELIHGDLCGPISPPTAAKRR 469
Query: 123 YVFVIIDDFSRYMWTILMKEKGEAFGKFKTFRQLVEKE 10
Y+ V+IDD SR+MW+ L+KEK EAFGKFKTF+ VE+E
Sbjct: 470 YILVLIDDHSRFMWSFLLKEKSEAFGKFKTFKATVEQE 507
>pir||E84492 probable retroelement pol polyprotein [imported] - Arabidopsis
thaliana
Length = 531
Score = 338 bits (866), Expect = 2e-90
Identities = 156/277 (56%), Positives = 206/277 (74%)
Frame = -3
Query: 840 MHEVVLLNEEKIIPRNYEIKEGEGKVWYLDNGASNHMTGNRAFFSELNEKIKGKVKFGDG 661
MHEVV LNE+ +P ++E VWYLDNGASNHMTG+R +F +++ I GK++FGD
Sbjct: 146 MHEVVYLNEQSCMPSSFETNVDGENVWYLDNGASNHMTGDRRYFDKMDHSITGKIRFGDD 205
Query: 660 SCIDIGGKGSILFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCDVRMKQDYLTVHD 481
S IDI GKG+I F + +++ D+Y+IPELKSNI+SLGQATE+GC++++K YLT+HD
Sbjct: 206 SRIDIKGKGTIAFIDLNGKPRVMLDVYFIPELKSNIISLGQATESGCEIKLKDGYLTMHD 265
Query: 480 PSGRLLVKVTRSPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVSFKTMRSMSQQEM 301
G+LLVK RS N LYKV + + K CL+ + WHAR+GHVS T++SM +E+
Sbjct: 266 QEGKLLVKAERSRNSLYKVKMGLRKEACLYLTSTSMSSLWHARMGHVSLITLKSMIDKEL 325
Query: 300 VQGLPKIKGENRICESCLVGKQVRGSFPKAATFRATKSLELLHADLCGPISPPTIANNRY 121
+QG P + E+ +C SCL+GKQ R SFP+A FRATK LEL+H DLCGPI+P T NRY
Sbjct: 326 IQGAPSLVIESEVCGSCLLGKQTRQSFPQATVFRATKKLELIHGDLCGPITPKTSVGNRY 385
Query: 120 VFVIIDDFSRYMWTILMKEKGEAFGKFKTFRQLVEKE 10
+FV+IDD+SRYMWT+L+KEKG+AF KFK F+ LVEKE
Sbjct: 386 IFVLIDDYSRYMWTVLLKEKGDAFFKFKNFKALVEKE 422
>gb|AAM15219.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 767
Score = 338 bits (866), Expect = 2e-90
Identities = 156/277 (56%), Positives = 206/277 (74%)
Frame = -3
Query: 840 MHEVVLLNEEKIIPRNYEIKEGEGKVWYLDNGASNHMTGNRAFFSELNEKIKGKVKFGDG 661
MHEVV LNE+ +P ++E VWYLDNGASNHMTG+R +F +++ I GK++FGD
Sbjct: 43 MHEVVYLNEQSCMPSSFETNVDGENVWYLDNGASNHMTGDRRYFDKMDHSITGKIRFGDD 102
Query: 660 SCIDIGGKGSILFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCDVRMKQDYLTVHD 481
S IDI GKG+I F + +++ D+Y+IPELKSNI+SLGQATE+GC++++K YLT+HD
Sbjct: 103 SRIDIKGKGTIAFIDLNGKPRVMLDVYFIPELKSNIISLGQATESGCEIKLKDGYLTMHD 162
Query: 480 PSGRLLVKVTRSPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVSFKTMRSMSQQEM 301
G+LLVK RS N LYKV + + K CL+ + WHAR+GHVS T++SM +E+
Sbjct: 163 QEGKLLVKAERSRNSLYKVKMGLRKEACLYLTSTSMSSLWHARMGHVSLITLKSMIDKEL 222
Query: 300 VQGLPKIKGENRICESCLVGKQVRGSFPKAATFRATKSLELLHADLCGPISPPTIANNRY 121
+QG P + E+ +C SCL+GKQ R SFP+A FRATK LEL+H DLCGPI+P T NRY
Sbjct: 223 IQGAPSLVIESEVCGSCLLGKQTRQSFPQATVFRATKKLELIHGDLCGPITPKTSVGNRY 282
Query: 120 VFVIIDDFSRYMWTILMKEKGEAFGKFKTFRQLVEKE 10
+FV+IDD+SRYMWT+L+KEKG+AF KFK F+ LVEKE
Sbjct: 283 IFVLIDDYSRYMWTVLLKEKGDAFFKFKNFKALVEKE 319
>dbj|BAB02990.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1250
Score = 317 bits (813), Expect = 3e-84
Identities = 150/277 (54%), Positives = 203/277 (73%)
Frame = -3
Query: 840 MHEVVLLNEEKIIPRNYEIKEGEGKVWYLDNGASNHMTGNRAFFSELNEKIKGKVKFGDG 661
+HEVV LNE+ + P +E VWYLDNGASNHM KV+FGD
Sbjct: 228 VHEVVYLNEKNVKPSEFETSSDASNVWYLDNGASNHM----------------KVRFGDD 271
Query: 660 SCIDIGGKGSILFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCDVRMKQDYLTVHD 481
S IDI GKGS+LF SK +E+K++ D+Y+IP+LKSNI+SLGQATE+GC+VRMK D L +HD
Sbjct: 272 SRIDIKGKGSVLFISKNKEKKILADVYFIPDLKSNIISLGQATESGCEVRMKDDLLIMHD 331
Query: 480 PSGRLLVKVTRSPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVSFKTMRSMSQQEM 301
G+LLVK RS NRLYKV + I P CL A++ + +WH+RLGH+ +T+++M ++++
Sbjct: 332 KDGKLLVKANRSKNRLYKVLMEIEPPKCLQAMVLSNSAKWHSRLGHIGVETLKTMVKKDL 391
Query: 300 VQGLPKIKGENRICESCLVGKQVRGSFPKAATFRATKSLELLHADLCGPISPPTIANNRY 121
V G+P+++ + C SCL+GKQV SFP+A+++RAT++LEL+H DLCGPI+PPT A NRY
Sbjct: 392 VIGMPQMEVDKETCASCLLGKQVSKSFPQASSYRATQNLELIHGDLCGPITPPTSARNRY 451
Query: 120 VFVIIDDFSRYMWTILMKEKGEAFGKFKTFRQLVEKE 10
+FV+IDD SRYMW+IL+KEK E F K K F+ VE+E
Sbjct: 452 IFVLIDDHSRYMWSILLKEKNEPFEKSKRFKTRVEQE 488
>gb|AAD32898.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1307
Score = 286 bits (731), Expect = 9e-75
Identities = 150/277 (54%), Positives = 187/277 (67%)
Frame = -3
Query: 840 MHEVVLLNEEKIIPRNYEIKEGEGKVWYLDNGASNHMTGNRAFFSELNEKIKGKVKFGDG 661
MHEVV LNE + P+ +E WYLDNGASNHMTGN +FS+LNE I GKV+FGD
Sbjct: 256 MHEVVYLNERSVKPKEFEACSDNS--WYLDNGASNHMTGNLQWFSKLNEMITGKVRFGDD 313
Query: 660 SCIDIGGKGSILFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCDVRMKQDYLTVHD 481
S IDI GKGSI+ +K +K + D+Y+IP+LKSNI+SLGQATEAGCDVRMK D LT+HD
Sbjct: 314 SRIDIKGKGSIVLITKGGIRKTLTDVYFIPDLKSNIISLGQATEAGCDVRMKDDQLTLHD 373
Query: 480 PSGRLLVKVTRSPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVSFKTMRSMSQQEM 301
G LL++ TRS NRLYKV L + CL LE T M ++E+
Sbjct: 374 REGCLLLRATRSRNRLYKVDLNVENVKCLQ--LEAAT-----------------MVRKEL 414
Query: 300 VQGLPKIKGENRICESCLVGKQVRGSFPKAATFRATKSLELLHADLCGPISPPTIANNRY 121
V G+ I E C SCL+GKQ R FPKA T+RA++ LEL+H DLCGPI+ T A RY
Sbjct: 415 VIGISNIPKEKETCGSCLLGKQARQPFPKATTYRASQVLELVHGDLCGPITQSTTAKKRY 474
Query: 120 VFVIIDDFSRYMWTILMKEKGEAFGKFKTFRQLVEKE 10
+ V+IDD +RYMW++L+KEK EAF KF+ F+ VE+E
Sbjct: 475 ILVLIDDHTRYMWSMLLKEKSEAFEKFRDFKTKVEQE 511
>emb|CAE04422.2| OSJNBb0040D15.12 [Oryza sativa Japonica Group]
Length = 893
Score = 278 bits (711), Expect = 2e-72
Identities = 136/274 (49%), Positives = 189/274 (68%), Gaps = 3/274 (1%)
Frame = -3
Query: 828 VLLNEEKIIPRNYEIKEGE--GKVWYLDNGASNHMTGNRAFFSELNEKIKGKVKFGDGSC 655
++++EE++ PR ++G G +WYLDNGASNHM+G+R F EL+E + G+V+FGD S
Sbjct: 150 LVVHEERVWPRLMLAEKGAAAGDLWYLDNGASNHMSGDRRKFRELDETVTGQVRFGDASS 209
Query: 654 IDIGGKGSILFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCDVRMKQDYLTVHDPS 475
+ I G+GSILF K +Q L+ D+YYIP L N++SLGQ TE G V M D L V D +
Sbjct: 210 VQIMGQGSILFSCKNGDQWLLDDVYYIPSLCCNMVSLGQLTETGHRVVMDGDDLEVFDKN 269
Query: 474 G-RLLVKVTRSPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVSFKTMRSMSQQEMV 298
RL++KV R+ NRLY++ L++ P+CL A L+D W WHARLGHV+F ++ + +EMV
Sbjct: 270 PWRLVMKVRRTSNRLYRIELQLASPVCLLASLDDPAWLWHARLGHVNFHALKLLVDKEMV 329
Query: 297 QGLPKIKGENRICESCLVGKQVRGSFPKAATFRATKSLELLHADLCGPISPPTIANNRYV 118
G+P + N++C++CLV KQVR SFP A +RA LELLH DLCGPI+P T A NRY
Sbjct: 330 AGVPAVHHPNQLCQACLVAKQVRQSFPGMANYRAEAPLELLHMDLCGPITPSTFAGNRYF 389
Query: 117 FVIIDDFSRYMWTILMKEKGEAFGKFKTFRQLVE 16
+I+DDFSR+MW ++K K +A + F+ L E
Sbjct: 390 MLIVDDFSRWMWVFVIKSKDQALAASEKFKPLAE 423
>ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group]
gi|113622864|dbj|BAF22809.1| Os08g0125300 [Oryza sativa
Japonica Group] gi|215701150|dbj|BAG92574.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 1427
Score = 278 bits (710), Expect = 2e-72
Identities = 134/274 (48%), Positives = 188/274 (68%), Gaps = 3/274 (1%)
Frame = -3
Query: 828 VLLNEEKIIPRNYEIKEGE--GKVWYLDNGASNHMTGNRAFFSELNEKIKGKVKFGDGSC 655
++++EE++ P+ G G +W+LDNGASNHMTG+RA F +L+ I G VKFGD S
Sbjct: 337 LVVHEERVWPQLLLADSGAATGDIWFLDNGASNHMTGDRAKFRDLDVSITGSVKFGDAST 396
Query: 654 IDIGGKGSILFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCDVRMKQDYLTVHDPS 475
+ I GKGSILF K +Q L+ D++YIP L N++SLGQ TE G V M +D L V D S
Sbjct: 397 VKIQGKGSILFSCKNGDQWLLQDVFYIPSLCCNMVSLGQLTETGHRVVMDEDVLEVFDKS 456
Query: 474 G-RLLVKVTRSPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVSFKTMRSMSQQEMV 298
RL+++V R+PNRLY++ L++ P+CL +++ W WHARLGHV+F+ M+ ++ + M
Sbjct: 457 PLRLVMRVRRTPNRLYRIELKLATPVCLLTRMDEPAWLWHARLGHVNFQAMKLLADKGMA 516
Query: 297 QGLPKIKGENRICESCLVGKQVRGSFPKAATFRATKSLELLHADLCGPISPPTIANNRYV 118
G+P I N++C++CLV KQ+R FP A FRA + LELLH DLCGPI+P T+A NRY
Sbjct: 517 GGIPAITHPNQLCQACLVAKQIRQPFPATANFRAEEPLELLHIDLCGPITPTTMAGNRYF 576
Query: 117 FVIIDDFSRYMWTILMKEKGEAFGKFKTFRQLVE 16
+I+DDFSR+MW ++K K +A F F+ L E
Sbjct: 577 MLIVDDFSRWMWMFVIKTKDQALEAFTKFKPLAE 610
>gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indica Group]
Length = 1427
Score = 278 bits (710), Expect = 2e-72
Identities = 134/274 (48%), Positives = 188/274 (68%), Gaps = 3/274 (1%)
Frame = -3
Query: 828 VLLNEEKIIPRNYEIKEGE--GKVWYLDNGASNHMTGNRAFFSELNEKIKGKVKFGDGSC 655
++++EE++ P+ G G +W+LDNGASNHMTG+RA F +L+ I G VKFGD S
Sbjct: 337 LVVHEERVWPQLLLADSGAATGDIWFLDNGASNHMTGDRAKFRDLDVSITGSVKFGDAST 396
Query: 654 IDIGGKGSILFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCDVRMKQDYLTVHDPS 475
+ I GKGSILF K +Q L+ D++YIP L N++SLGQ TE G V M +D L V D S
Sbjct: 397 VKIQGKGSILFSCKNGDQWLLQDVFYIPSLCCNMVSLGQLTETGHRVVMDEDVLEVFDKS 456
Query: 474 G-RLLVKVTRSPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVSFKTMRSMSQQEMV 298
RL+++V R+PNRLY++ L++ P+CL +++ W WHARLGHV+F+ M+ ++ + M
Sbjct: 457 PLRLVMRVRRTPNRLYRIELKLATPVCLLTRMDEPAWLWHARLGHVNFQAMKLLADKGMA 516
Query: 297 QGLPKIKGENRICESCLVGKQVRGSFPKAATFRATKSLELLHADLCGPISPPTIANNRYV 118
G+P I N++C++CLV KQ+R FP A FRA + LELLH DLCGPI+P T+A NRY
Sbjct: 517 GGIPAITHPNQLCQACLVAKQIRQPFPATANFRAEEPLELLHIDLCGPITPTTMAGNRYF 576
Query: 117 FVIIDDFSRYMWTILMKEKGEAFGKFKTFRQLVE 16
+I+DDFSR+MW ++K K +A F F+ L E
Sbjct: 577 MLIVDDFSRWMWMFVIKTKDQALEAFTKFKPLAE 610
>gb|ABF96448.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1303
Score = 275 bits (702), Expect = 2e-71
Identities = 134/274 (48%), Positives = 186/274 (67%), Gaps = 3/274 (1%)
Frame = -3
Query: 828 VLLNEEKIIPRNYEIKEGE--GKVWYLDNGASNHMTGNRAFFSELNEKIKGKVKFGDGSC 655
++++EE++ PR ++G G +WYLDNGASNHMTG+R F EL+E + G V+FGD S
Sbjct: 330 LVVHEERVWPRLMLAEKGAAAGDLWYLDNGASNHMTGDRRKFRELDETVTGVVRFGDASS 389
Query: 654 IDIGGKGSILFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCDVRMKQDYLTVHDPS 475
+ I GKG ILF K +Q L+ D+YYIP L N++SLGQ TE G V M D L V D +
Sbjct: 390 VQIMGKGLILFACKNGDQWLLDDVYYIPSLCCNMVSLGQLTETGHRVVMDNDDLEVFDKN 449
Query: 474 G-RLLVKVTRSPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVSFKTMRSMSQQEMV 298
RL++KV R+ NRLY++ L++ P+CL L D W WHARLGHV+F+T++ + +EM
Sbjct: 450 PWRLVIKVRRTSNRLYRIELQLASPVCLLTSLGDPAWLWHARLGHVNFQTLKLLVDKEMA 509
Query: 297 QGLPKIKGENRICESCLVGKQVRGSFPKAATFRATKSLELLHADLCGPISPPTIANNRYV 118
G+P++ N++C++CL+ KQ+R FP A +RA LELLH DLCGPI+P T A NRY
Sbjct: 510 AGVPQVHHPNQLCQACLMAKQIRQPFPAMANYRAEAPLELLHMDLCGPITPSTFAVNRYF 569
Query: 117 FVIIDDFSRYMWTILMKEKGEAFGKFKTFRQLVE 16
+I+DDFSR+MW ++K K +A F F+ L E
Sbjct: 570 LLIVDDFSRWMWVFVIKTKDQALEMFAKFKPLAE 603
>gb|AAP12935.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1283
Score = 275 bits (702), Expect = 2e-71
Identities = 134/274 (48%), Positives = 186/274 (67%), Gaps = 3/274 (1%)
Frame = -3
Query: 828 VLLNEEKIIPRNYEIKEGE--GKVWYLDNGASNHMTGNRAFFSELNEKIKGKVKFGDGSC 655
++++EE++ PR ++G G +WYLDNGASNHMTG+R F EL+E + G V+FGD S
Sbjct: 330 LVVHEERVWPRLMLAEKGAAAGDLWYLDNGASNHMTGDRRKFRELDETVTGVVRFGDASS 389
Query: 654 IDIGGKGSILFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCDVRMKQDYLTVHDPS 475
+ I GKG ILF K +Q L+ D+YYIP L N++SLGQ TE G V M D L V D +
Sbjct: 390 VQIMGKGLILFACKNGDQWLLDDVYYIPSLCCNMVSLGQLTETGHRVVMDNDDLEVFDKN 449
Query: 474 G-RLLVKVTRSPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVSFKTMRSMSQQEMV 298
RL++KV R+ NRLY++ L++ P+CL L D W WHARLGHV+F+T++ + +EM
Sbjct: 450 PWRLVIKVRRTSNRLYRIELQLASPVCLLTSLGDPAWLWHARLGHVNFQTLKLLVDKEMA 509
Query: 297 QGLPKIKGENRICESCLVGKQVRGSFPKAATFRATKSLELLHADLCGPISPPTIANNRYV 118
G+P++ N++C++CL+ KQ+R FP A +RA LELLH DLCGPI+P T A NRY
Sbjct: 510 AGVPQVHHPNQLCQACLMAKQIRQPFPAMANYRAEAPLELLHMDLCGPITPSTFAVNRYF 569
Query: 117 FVIIDDFSRYMWTILMKEKGEAFGKFKTFRQLVE 16
+I+DDFSR+MW ++K K +A F F+ L E
Sbjct: 570 LLIVDDFSRWMWVFVIKTKDQALEMFAKFKPLAE 603
>gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]
gi|108710383|gb|ABF98178.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 1339
Score = 273 bits (697), Expect = 8e-71
Identities = 133/274 (48%), Positives = 184/274 (67%), Gaps = 3/274 (1%)
Frame = -3
Query: 828 VLLNEEKIIPRNYEIKEGE--GKVWYLDNGASNHMTGNRAFFSELNEKIKGKVKFGDGSC 655
++++EE++ PR ++G G +WYLDNGASNHM+G+ F EL+E + G+V+FGD S
Sbjct: 290 LVVHEERVWPRLMLAEKGAAAGDLWYLDNGASNHMSGDHRKFRELDETVTGQVRFGDASS 349
Query: 654 IDIGGKGSILFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCDVRMKQDYLTVHDPS 475
+ I GKGSILF K +Q L+ D+YYIP L N++SLGQ TE G V M D L V D +
Sbjct: 350 VQIMGKGSILFSCKNGDQWLLDDVYYIPSLYCNMVSLGQLTETGHRVVMDGDDLEVFDKN 409
Query: 474 G-RLLVKVTRSPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVSFKTMRSMSQQEMV 298
RL++KV RS NRLY++ L++ P+CL A L+D W WHARLGHV+F ++ + +EM
Sbjct: 410 PWRLVMKVRRSSNRLYRIELQLASPVCLLASLDDPAWLWHARLGHVNFHALKLLVDKEMA 469
Query: 297 QGLPKIKGENRICESCLVGKQVRGSFPKAATFRATKSLELLHADLCGPISPPTIANNRYV 118
G+P + N++C++CLV KQVR FP A + A LELLH DLCGPI+P T NRY
Sbjct: 470 AGVPAVHHPNQLCQACLVAKQVRQPFPGMANYLAEAPLELLHMDLCGPITPSTFTGNRYF 529
Query: 117 FVIIDDFSRYMWTILMKEKGEAFGKFKTFRQLVE 16
+I+DDFS +MW ++K K +A F+ F+ L E
Sbjct: 530 MLIVDDFSHWMWVFVIKSKDQALAAFEKFKPLAE 563
>gb|AAF67366.1| Hypothetical protein T32B20.i [Arabidopsis thaliana]
Length = 724
Score = 268 bits (684), Expect = 2e-69
Identities = 124/240 (51%), Positives = 173/240 (72%)
Frame = -3
Query: 840 MHEVVLLNEEKIIPRNYEIKEGEGKVWYLDNGASNHMTGNRAFFSELNEKIKGKVKFGDG 661
MHE+V +NE+ + + E +WYLDNGASNHMTGN +FS++++ + GKV+FGD
Sbjct: 149 MHELVYINEKNVQRKALEENSDFKDMWYLDNGASNHMTGNLEYFSKIDKTVTGKVRFGDD 208
Query: 660 SCIDIGGKGSILFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCDVRMKQDYLTVHD 481
S IDI GKGSI F SK + KL+ D+YYIP+L+SNI+SLGQATEAGCDVRM++ YLT+ D
Sbjct: 209 SRIDIKGKGSIPFVSKNGDSKLLEDVYYIPDLRSNIISLGQATEAGCDVRMRKGYLTLFD 268
Query: 480 PSGRLLVKVTRSPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVSFKTMRSMSQQEM 301
G LL+ R+ NRLYKV+L + + CL + ++ WH R+GH+ F M+++ +E+
Sbjct: 269 REGELLIWANRARNRLYKVTLEVKQNKCLQLSMSSDSMNWHDRMGHIGFDNMKTVINKEL 328
Query: 300 VQGLPKIKGENRICESCLVGKQVRGSFPKAATFRATKSLELLHADLCGPISPPTIANNRY 121
V +PK+ E + C SCL+GKQVR SFP++ ++RA+ LEL+H DLCGPI+PPT AN +
Sbjct: 329 VIRIPKLIVEKQTCTSCLLGKQVRQSFPQSTSYRASNPLELVHGDLCGPITPPTTANKSF 388
>gb|ABB47537.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1172
Score = 267 bits (682), Expect = 4e-69
Identities = 131/277 (47%), Positives = 186/277 (67%), Gaps = 3/277 (1%)
Frame = -3
Query: 837 HEVVLLNEEKIIPRNYEIKEGE--GKVWYLDNGASNHMTGNRAFFSELNEKIKGKVKFGD 664
H ++++EE++ PR ++G G +WYLDNGASNHM+G+R F EL+E + G+V+FGD
Sbjct: 181 HCGLVVHEERVWPRLMLAEKGAAAGDLWYLDNGASNHMSGDRRKFRELDETMTGQVRFGD 240
Query: 663 GSCIDIGGKGSILFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCDVRMKQDYLTVH 484
S + I G GSILF K +Q L+ D+YYIP L N++SLGQ TE G V M D L V
Sbjct: 241 ASSVQIMGMGSILFSCKNGDQWLLDDVYYIPSLCCNMVSLGQLTETGHRVMMDGDDLKVF 300
Query: 483 DPSG-RLLVKVTRSPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVSFKTMRSMSQQ 307
D + RL++KV R+ NRLY++ L++ +CL A L++ W WHAR+GHV+F ++ + +
Sbjct: 301 DKNPWRLVMKVRRTSNRLYRIELQLASQVCLLASLDNPAWLWHARIGHVNFHALKLLVDK 360
Query: 306 EMVQGLPKIKGENRICESCLVGKQVRGSFPKAATFRATKSLELLHADLCGPISPPTIANN 127
EM G+P + N++C++CLV KQVR FP A +RA LELLH DLCGPI+P T A N
Sbjct: 361 EMASGVPTVHHPNQLCQACLVAKQVRQPFPGMANYRAEAPLELLHMDLCGPITPSTFAGN 420
Query: 126 RYVFVIIDDFSRYMWTILMKEKGEAFGKFKTFRQLVE 16
RY +I+DDFS +MW ++K K +A F+ F+ L +
Sbjct: 421 RYFMLIVDDFSNWMWVFVIKLKDQALAVFEKFKPLAK 457
>gb|AAK50412.1|AC021891_13 Putative retroelement [Oryza sativa Japonica Group]
Length = 1217
Score = 267 bits (682), Expect = 4e-69
Identities = 131/277 (47%), Positives = 186/277 (67%), Gaps = 3/277 (1%)
Frame = -3
Query: 837 HEVVLLNEEKIIPRNYEIKEGE--GKVWYLDNGASNHMTGNRAFFSELNEKIKGKVKFGD 664
H ++++EE++ PR ++G G +WYLDNGASNHM+G+R F EL+E + G+V+FGD
Sbjct: 325 HCGLVVHEERVWPRLMLAEKGAAAGDLWYLDNGASNHMSGDRRKFRELDETMTGQVRFGD 384
Query: 663 GSCIDIGGKGSILFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCDVRMKQDYLTVH 484
S + I G GSILF K +Q L+ D+YYIP L N++SLGQ TE G V M D L V
Sbjct: 385 ASSVQIMGMGSILFSCKNGDQWLLDDVYYIPSLCCNMVSLGQLTETGHRVMMDGDDLKVF 444
Query: 483 DPSG-RLLVKVTRSPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVSFKTMRSMSQQ 307
D + RL++KV R+ NRLY++ L++ +CL A L++ W WHAR+GHV+F ++ + +
Sbjct: 445 DKNPWRLVMKVRRTSNRLYRIELQLASQVCLLASLDNPAWLWHARIGHVNFHALKLLVDK 504
Query: 306 EMVQGLPKIKGENRICESCLVGKQVRGSFPKAATFRATKSLELLHADLCGPISPPTIANN 127
EM G+P + N++C++CLV KQVR FP A +RA LELLH DLCGPI+P T A N
Sbjct: 505 EMASGVPTVHHPNQLCQACLVAKQVRQPFPGMANYRAEAPLELLHMDLCGPITPSTFAGN 564
Query: 126 RYVFVIIDDFSRYMWTILMKEKGEAFGKFKTFRQLVE 16
RY +I+DDFS +MW ++K K +A F+ F+ L +
Sbjct: 565 RYFMLIVDDFSNWMWVFVIKLKDQALAVFEKFKPLAK 601
>gb|AAF63110.1|AC006423_11 putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1150
Score = 260 bits (665), Expect = 4e-67
Identities = 132/234 (56%), Positives = 165/234 (70%)
Frame = -3
Query: 711 FSELNEKIKGKVKFGDGSCIDIGGKGSILFQSKTEEQKLVPDIYYIPELKSNILSLGQAT 532
FS L++ + GKV F D S IDI G G +Q+ V ++Y+I +LKSNI+SLGQAT
Sbjct: 202 FSTLDDSVSGKVHFRDDSRIDIKGNG---------DQQKVSNVYFILDLKSNIISLGQAT 252
Query: 531 EAGCDVRMKQDYLTVHDPSGRLLVKVTRSPNRLYKVSLRIGKPMCLHAILEDETWRWHAR 352
E+GC++ MK D LT+HD G+LLVK RS N LYKV + I LH E+ RWHAR
Sbjct: 253 ESGCNITMKGDQLTMHDRDGKLLVKACRSKNHLYKVRMGIKGATRLHLTTISESSRWHAR 312
Query: 351 LGHVSFKTMRSMSQQEMVQGLPKIKGENRICESCLVGKQVRGSFPKAATFRATKSLELLH 172
LGHV+F T++SM Q+E+VQG + +C SCL+GKQ R +FPKA FRA K LEL+H
Sbjct: 313 LGHVNFDTIKSMMQKELVQGFSLGSIKKELCSSCLLGKQTRLAFPKATLFRAAKILELVH 372
Query: 171 ADLCGPISPPTIANNRYVFVIIDDFSRYMWTILMKEKGEAFGKFKTFRQLVEKE 10
DLCGPI+P T A NRYVFV+IDD SRYMWTIL+KEK EAF KF+ F+ LVE+E
Sbjct: 373 GDLCGPITPSTAAGNRYVFVLIDDHSRYMWTILLKEKSEAFNKFRKFKSLVEQE 426
>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1352
Score = 259 bits (663), Expect = 7e-67
Identities = 121/276 (43%), Positives = 181/276 (65%), Gaps = 1/276 (0%)
Frame = -3
Query: 834 EVVLLNEEKIIPRNYEIKEGE-GKVWYLDNGASNHMTGNRAFFSELNEKIKGKVKFGDGS 658
E + E+ ++ +Y+ E E WYLD+GASNHM G ++ F+EL+E ++G V GD S
Sbjct: 310 EEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDES 369
Query: 657 CIDIGGKGSILFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCDVRMKQDYLTVHDP 478
+++ GKG+IL + K + + + ++YYIP +K+NILSLGQ E G D+R+K + L++ D
Sbjct: 370 KMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQ 429
Query: 477 SGRLLVKVTRSPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVSFKTMRSMSQQEMV 298
L+ KV S NR++ +++R CL ++E+W WH R GH++F + +S++EMV
Sbjct: 430 ESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMV 489
Query: 297 QGLPKIKGENRICESCLVGKQVRGSFPKAATFRATKSLELLHADLCGPISPPTIANNRYV 118
+GLP I N++CE CL+GKQ + SFPK ++ RA KSLEL+H D+CGPI P ++ + Y
Sbjct: 490 RGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKSLELIHTDVCGPIKPKSLGKSNYF 549
Query: 117 FVIIDDFSRYMWTILMKEKGEAFGKFKTFRQLVEKE 10
+ IDDFSR W +KEK E F FK F+ VEKE
Sbjct: 550 LLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKE 585
>emb|CAD41367.2| OSJNBa0088A01.6 [Oryza sativa Japonica Group]
Length = 1403
Score = 259 bits (661), Expect = 1e-66
Identities = 121/275 (44%), Positives = 179/275 (65%)
Frame = -3
Query: 834 EVVLLNEEKIIPRNYEIKEGEGKVWYLDNGASNHMTGNRAFFSELNEKIKGKVKFGDGSC 655
+ + L E K+ K+ +G VW+LD GA+NHMTG R F+EL+ ++G V+FGDGS
Sbjct: 369 KTIELVEPKVFAHLLTEKQTDGGVWHLDTGATNHMTGIREVFAELDLSVRGSVRFGDGSV 428
Query: 654 IDIGGKGSILFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCDVRMKQDYLTVHDPS 475
+ I G+G I+F+ + +E + + +YYIP+L +N++SLGQ E GCDVR+ T+ DP+
Sbjct: 429 VGIEGRGKIIFECRNQEHRALTGVYYIPKLNANLISLGQLDENGCDVRIYHGVCTIRDPA 488
Query: 474 GRLLVKVTRSPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVSFKTMRSMSQQEMVQ 295
+LL +V R+ NRLY + L IG+P+CL A ++ W WHAR GH+ F +R ++ ++MV+
Sbjct: 489 AQLLARVQRTRNRLYLIKLTIGQPVCLAAKAQECAWLWHARYGHLHFDALRRLASRDMVR 548
Query: 294 GLPKIKGENRICESCLVGKQVRGSFPKAATFRATKSLELLHADLCGPISPPTIANNRYVF 115
G+P I ++C+SC++ KQ R FP+ + FRA LEL+H DLCGPISP T + F
Sbjct: 549 GMPDIDHVEQLCDSCVISKQRRTPFPRRSMFRAEDRLELVHGDLCGPISPATPGGKTH-F 607
Query: 114 VIIDDFSRYMWTILMKEKGEAFGKFKTFRQLVEKE 10
+++DD SRYMW L+ K EA K F+ E E
Sbjct: 608 LLLDDASRYMWITLLGCKSEAADAIKRFQARAEAE 642
>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
polyprotein, putative [Arabidopsis thaliana]
Length = 1320
Score = 258 bits (658), Expect = 3e-66
Identities = 120/276 (43%), Positives = 180/276 (65%), Gaps = 1/276 (0%)
Frame = -3
Query: 834 EVVLLNEEKIIPRNYEIKEGE-GKVWYLDNGASNHMTGNRAFFSELNEKIKGKVKFGDGS 658
E + E+ ++ +Y+ E E WYLD+GASNHM G ++ F+EL+E ++G V GD S
Sbjct: 310 EEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDES 369
Query: 657 CIDIGGKGSILFQSKTEEQKLVPDIYYIPELKSNILSLGQATEAGCDVRMKQDYLTVHDP 478
+++ GKG+IL + K + + + ++YYIP +K+NILSLGQ E G D+R+K + L++ D
Sbjct: 370 KMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQ 429
Query: 477 SGRLLVKVTRSPNRLYKVSLRIGKPMCLHAILEDETWRWHARLGHVSFKTMRSMSQQEMV 298
L+ KV S NR++ +++R CL ++E+W WH R GH++F + +S++EMV
Sbjct: 430 ESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMV 489
Query: 297 QGLPKIKGENRICESCLVGKQVRGSFPKAATFRATKSLELLHADLCGPISPPTIANNRYV 118
+GLP I N++CE CL+GKQ + SFPK ++ RA K LEL+H D+CGPI P ++ + Y
Sbjct: 490 RGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYF 549
Query: 117 FVIIDDFSRYMWTILMKEKGEAFGKFKTFRQLVEKE 10
+ IDDFSR W +KEK E F FK F+ VEKE
Sbjct: 550 LLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKE 585