BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia22_contig00024252
         (789 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28730.1| Ribonuclease H [Medicago truncatula]                    75   4e-11
ref|XP_004296004.1| PREDICTED: putative ribonuclease H protein A...    74   5e-11
ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medica...    63   1e-07
ref|XP_004292254.1| PREDICTED: putative ribonuclease H protein A...    59   2e-06

>gb|ABD28730.1| Ribonuclease H [Medicago truncatula]
          Length = 409

 Score = 74.7 bits (182), Expect = 4e-11
 Identities = 62/263 (23%), Positives = 105/263 (39%), Gaps = 33/263 (12%)
 Frame = +2

Query: 98  SFLVWRLLYRRIVVDEELLKRGI-LVSICYGYCNREMETLEHLFLKCDPAAILWTWLKVS 274
           +F+ WR L+ ++  D+ L KRG  +VSIC  +C ++ ET  H+FL+C     LW WL  +
Sbjct: 85  AFITWRFLHNKLPTDDNLRKRGCYIVSICCCFCRKQAETSSHIFLQCPVTLQLWDWLLKA 144

Query: 275 FKIHLDLDNSIEY*SSMKTRNSLKFYNVKMDAEIVLKQIQQWTN*YGKLGSRI------- 433
              HLD  + +    S   ++ +    V +   I L+   ++ +   K  S +       
Sbjct: 145 TDQHLDFSSILNI--SRMVQHVMNSAIVHIMWSIWLECNNKYFDGVQKPMSTLFNTILAE 202

Query: 434 --------------SSKKDKDILICLNVTHKVSKSSSLIPVKWFLQDDR*IELICDKASQ 571
                         SS +D  +    ++  K ++ +    + W       +++ CD +  
Sbjct: 203 VLRLSFMLDIVKGASSMQDFKLARLFSIPFKTNRVNPCREIIWVPPHGGCMKINCDGSVV 262

Query: 572 GNPGIASAGRVLRDSK-----------GAVLGFXXXXXXXXXXXXXXXXNGWNNLWIELD 718
           G+P   S G + R S+           G                         N+WIE D
Sbjct: 263 GSPSCGSIGVIFRASQTMFCGAFAQNIGYATALEAEYSACMFAIEKAKELHLTNIWIETD 322

Query: 719 SMITVIIVLSFSNHVPWKTYNRW 787
           S + VI    F+  VPWK + RW
Sbjct: 323 S-VNVIRAFHFNTGVPWKMHIRW 344


>ref|XP_004296004.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 751

 Score = 74.3 bits (181), Expect = 5e-11
 Identities = 65/263 (24%), Positives = 103/263 (39%), Gaps = 39/263 (14%)
 Frame = +2

Query: 98   SFLVWRLLYRRIVVDEELLKRGI-LVSICYGYCNREMETLEHLFLKCDPAAILWTWLKVS 274
            S L WR+ + ++  D++L +RGI  VS+C        E + HLF+ C  A  +W WL   
Sbjct: 484  SVLAWRIFHLKLPTDDQLQRRGIPFVSVCQLCSFSHTEDIPHLFVNCSFAQHIWQWLAYY 543

Query: 275  FKIHLDLDNSI-EY*SSM-------------------------KTRNSLKFYNVKMDAEI 376
            F   L    S+ +  SS+                         K+ N L+F N +     
Sbjct: 544  FGTSLPSSGSLNDLWSSVTGKAFSPQLKNIWFASCLFALMAIWKSHNKLRFDNKQPSLMR 603

Query: 377  VLKQIQQWTN*YGKLGSR-ISSKKDKDILICLNVTHKVSKSSSLIPVKWFLQDDR*IELI 553
            V + ++ W           +    D  +L  + V   +   S+L  V W       ++L 
Sbjct: 604  VFRSVKAWVRYIAPYTPGCVRGVLDSKVLSSMGVILVLKCQSALRIVLWHPPLIPWLKLN 663

Query: 554  CDKASQGNPGIASAGRVLRDSKGAVLG-----------FXXXXXXXXXXXXXXXXNGWNN 700
             +  S+GNPG+A  G V RDS G ++G           F                 GW++
Sbjct: 664  TNGFSKGNPGLAGCGGVFRDSFGRLIGGYCQGLGTQTTFFVELMTVILGVEFAFHFGWHH 723

Query: 701  LWIELDSMITVIIVLSFSNHVPW 769
            +W+E DS   +  + S S   PW
Sbjct: 724  IWLESDSTTILQCISSSSFAPPW 746


>ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula]
           gi|355496705|gb|AES77908.1| Cytochrome c biogenesis
           protein ccsA [Medicago truncatula]
          Length = 666

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 53/208 (25%), Positives = 94/208 (45%), Gaps = 29/208 (13%)
 Frame = +2

Query: 98  SFLVWRLLYRRIVVDEELLKRG-ILVSICYGYCNREMETLEHLFLKCDPAAILWTWLKVS 274
           SF+ WRLL+ ++  DE L KRG ++VSIC  +C +  E+ +H+F +C   + LW WL   
Sbjct: 50  SFITWRLLHNKLPTDENLRKRGCLIVSICC-FCMKSAESSQHIFFECHVTSRLWDWLGKG 108

Query: 275 FKIHLDLDNSIE-----Y*SSMKTRNSL------------------KFYNVKMDA----- 370
               LD  + ++     + S  K  N++                  + ++ K  A     
Sbjct: 109 TDKLLDCSSCLQLLIRNWGSGSKLVNNILNSAIIHTIWSIWIERNQRCFHNKHQAMTTLF 168

Query: 371 EIVLKQIQQWTN*YGKLGSRISSKKDKDILICLNVTHKVSKSSSLIPVKWFLQDDR*IEL 550
            I+L +++   +     G+  S+ +D  +    N+  KV + +  + + W       +++
Sbjct: 169 NIILAEVKMSFSLCMIKGN--SAMQDYKVAKLFNIPFKVKRVTPHLDIIWKPPIGDIVKI 226

Query: 551 ICDKASQGNPGIASAGRVLRDSKGAVLG 634
            CD +S G     S G V+RDS    LG
Sbjct: 227 NCDGSSVGRHPCGSIGIVIRDSNHHFLG 254


>ref|XP_004292254.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 197

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 11/122 (9%)
 Frame = +2

Query: 455 ILICLNVTHKVSKSSSLIPVKWFLQDDR*IELICDKASQGNPGIASAGRVLRDSKGAVLG 634
           IL  + +  + SK+  ++ V W +     ++L  D A++G+PG+A  G + RD  G VLG
Sbjct: 10  ILHRIGIKGRPSKAPKIVEVMWHVPSIYQVKLNTDGAARGSPGLAGFGGIFRDHLGHVLG 69

Query: 635 -----------FXXXXXXXXXXXXXXXXNGWNNLWIELDSMITVIIVLSFSNHVPWKTYN 781
                                        GW++LWIE DS + +  + SF   VPW+   
Sbjct: 70  CFSGNLGIANALEAELQTVIHAIQMASQRGWHSLWIESDSTLVIHFLSSFQVDVPWRFTT 129

Query: 782 RW 787
            W
Sbjct: 130 EW 131