BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia22_contig00024108
         (381 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containi...   208   6e-52
ref|XP_004308620.1| PREDICTED: pentatricopeptide repeat-containi...   194   8e-48
gb|EXB41187.1| hypothetical protein L484_005223 [Morus notabilis]     194   1e-47
ref|XP_006587960.1| PREDICTED: pentatricopeptide repeat-containi...   185   7e-45
ref|XP_007028547.1| Pentatricopeptide repeat (PPR) superfamily p...   183   2e-44
ref|XP_007161435.1| hypothetical protein PHAVU_001G068400g [Phas...   180   2e-43
ref|XP_007204422.1| hypothetical protein PRUPE_ppb002215mg [Prun...   180   2e-43
ref|XP_004498123.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   179   5e-43
ref|XP_003589755.1| Pentatricopeptide repeat-containing protein ...   178   8e-43
ref|XP_002322628.1| pentatricopeptide repeat-containing family p...   178   8e-43
ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containi...   174   1e-41
ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   172   6e-41
ref|NP_181048.1| pentatricopeptide repeat-containing protein [Ar...   171   1e-40
ref|XP_006410659.1| hypothetical protein EUTSA_v10016379mg [Eutr...   170   2e-40
ref|XP_006296159.1| hypothetical protein CARUB_v10025312mg [Caps...   169   4e-40
ref|XP_004237347.1| PREDICTED: pentatricopeptide repeat-containi...   166   4e-39
ref|XP_002881370.1| pentatricopeptide repeat-containing protein ...   166   4e-39
ref|XP_006340092.1| PREDICTED: pentatricopeptide repeat-containi...   164   9e-39
ref|XP_002529164.1| pentatricopeptide repeat-containing protein,...   160   1e-37
gb|EYU18647.1| hypothetical protein MIMGU_mgv1a022303mg, partial...   156   3e-36

>ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Vitis vinifera]
          Length = 635

 Score =  208 bits (530), Expect = 6e-52
 Identities = 98/126 (77%), Positives = 113/126 (89%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIA 181
           AQNGRIDSA+YLFEKMPERNV+SWN +++ L++C RIEEA R FD M ERDVISWTA+IA
Sbjct: 157 AQNGRIDSAMYLFEKMPERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIA 216

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTM 361
           GLS NG+I++AR++FDRMPERNVVSWNAMITGYA N RL EA DLF+RMPERDLPSWNTM
Sbjct: 217 GLSKNGRIDEARLLFDRMPERNVVSWNAMITGYAQNLRLDEALDLFERMPERDLPSWNTM 276

Query: 362 ITGFIK 379
           ITG I+
Sbjct: 277 ITGLIQ 282



 Score =  128 bits (322), Expect = 7e-28
 Identities = 64/126 (50%), Positives = 88/126 (69%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIA 181
           AQ GRI+ A  LF++MPER+VISW  +I  LSK  RI+EA   FD M ER+V+SW A+I 
Sbjct: 188 AQCGRIEEARRLFDRMPERDVISWTAMIAGLSKNGRIDEARLLFDRMPERNVVSWNAMIT 247

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTM 361
           G + N ++++A  +F+RMPER++ SWN MITG   N  L  A  LF  MP++++ SW TM
Sbjct: 248 GYAQNLRLDEALDLFERMPERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTM 307

Query: 362 ITGFIK 379
           ITG ++
Sbjct: 308 ITGCVQ 313



 Score =  117 bits (294), Expect = 1e-24
 Identities = 56/123 (45%), Positives = 85/123 (69%), Gaps = 1/123 (0%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLM-TERDVISWTAII 178
           +++GRI  A  LF++M E +VI+W  +I+   KC  IEEA R FD +  +++V++WTA++
Sbjct: 63  SKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVDAKKNVVTWTAMV 122

Query: 179 AGLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNT 358
            G   + KI  A  +F+ MP +NVVSWN MI GYA N R+  A  LF++MPER++ SWNT
Sbjct: 123 GGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNVVSWNT 182

Query: 359 MIT 367
           +++
Sbjct: 183 VMS 185



 Score =  112 bits (280), Expect = 5e-23
 Identities = 52/109 (47%), Positives = 73/109 (66%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIA 181
           ++NGRID A  LF++MPERNV+SWN +IT  ++  R++EA   F+ M ERD+ SW  +I 
Sbjct: 219 SKNGRIDEARLLFDRMPERNVVSWNAMITGYAQNLRLDEALDLFERMPERDLPSWNTMIT 278

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRM 328
           GL  NG + +AR +F+ MP++NV+SW  MITG        EA  +F RM
Sbjct: 279 GLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRM 327



 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 52/106 (49%), Positives = 71/106 (66%), Gaps = 1/106 (0%)
 Frame = +2

Query: 59  NVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIAGLSGNGKIEKARVVFDRM- 235
           NV   N +IT LSK  RI EA R FD M E DVI+WT +I+G    G IE+AR +FDR+ 
Sbjct: 51  NVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVD 110

Query: 236 PERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTMITGF 373
            ++NVV+W AM+ GY  + ++ +A  LF  MP +++ SWNTMI G+
Sbjct: 111 AKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGY 156



 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 37/82 (45%), Positives = 53/82 (64%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIA 181
           AQN R+D AL LFE+MPER++ SWN +IT L +   +  A + F+ M +++VISWT +I 
Sbjct: 250 AQNLRLDEALDLFERMPERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMIT 309

Query: 182 GLSGNGKIEKARVVFDRMPERN 247
           G    G+ E+A  +F RM   N
Sbjct: 310 GCVQEGESEEALKIFSRMLSTN 331


>ref|XP_004308620.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 714

 Score =  194 bits (494), Expect = 8e-48
 Identities = 89/126 (70%), Positives = 110/126 (87%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIA 181
           A++ R+D AL LFE+MPERNV+SWN ++TAL++C RIEEA R F LM ERDVISWTA++A
Sbjct: 155 ARSRRVDEALELFERMPERNVVSWNTVLTALAQCGRIEEARRLFGLMPERDVISWTAMVA 214

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTM 361
           GLS NG++++AR VFDRMP RNVVSWNAM+TGYA N RL EA +LF+RMPERD+PSWNTM
Sbjct: 215 GLSRNGRVDEAREVFDRMPRRNVVSWNAMVTGYAQNGRLEEALELFERMPERDMPSWNTM 274

Query: 362 ITGFIK 379
           +TGFI+
Sbjct: 275 VTGFIQ 280



 Score =  121 bits (304), Expect = 9e-26
 Identities = 58/123 (47%), Positives = 88/123 (71%), Gaps = 1/123 (0%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLM-TERDVISWTAII 178
           +++GRI  A  +F++MPER+V++W  +ITA  K   +EEA   FD     ++VI+WTA++
Sbjct: 61  SRDGRIREARQVFDEMPERDVVTWTTVITAYVKSGMLEEARSLFDRADAVKNVITWTALV 120

Query: 179 AGLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNT 358
            G     ++E+A ++F +MP RNVVSWN MI GYA + R+ EA +LF+RMPER++ SWNT
Sbjct: 121 GGYIRLRRLEEAEMLFYQMPVRNVVSWNTMIDGYARSRRVDEALELFERMPERNVVSWNT 180

Query: 359 MIT 367
           ++T
Sbjct: 181 VLT 183



 Score =  109 bits (273), Expect = 4e-22
 Identities = 48/109 (44%), Positives = 74/109 (67%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIA 181
           ++NGR+D A  +F++MP RNV+SWN ++T  ++  R+EEA   F+ M ERD+ SW  ++ 
Sbjct: 217 SRNGRVDEAREVFDRMPRRNVVSWNAMVTGYAQNGRLEEALELFERMPERDMPSWNTMVT 276

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRM 328
           G   NG +E+A  +F +MP++NV+SW  MITGY  + R  EA  +F +M
Sbjct: 277 GFIQNGDLERAWELFVQMPQKNVISWTTMITGYVQDGRNEEALMIFSKM 325



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
 Frame = +2

Query: 134 DLMTERDVISWTAIIAGLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFD 313
           D     DV     +I  LS +G+I +AR VFD MPER+VV+W  +IT Y  +  L EA  
Sbjct: 43  DHSASSDVAKSNWLITKLSRDGRIREARQVFDEMPERDVVTWTTVITAYVKSGMLEEARS 102

Query: 314 LFQRMPE-RDLPSWNTMITGFIK 379
           LF R    +++ +W  ++ G+I+
Sbjct: 103 LFDRADAVKNVITWTALVGGYIR 125


>gb|EXB41187.1| hypothetical protein L484_005223 [Morus notabilis]
          Length = 622

 Score =  194 bits (492), Expect = 1e-47
 Identities = 91/125 (72%), Positives = 110/125 (88%)
 Frame = +2

Query: 5   QNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIAG 184
           QNGR++SAL LF++MPERNV+SWN IITAL++  R+EEA R FD+M ERDVISWT ++AG
Sbjct: 149 QNGRVNSALGLFDRMPERNVVSWNTIITALAQSGRMEEARRLFDMMPERDVISWTTMVAG 208

Query: 185 LSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTMI 364
            S NG+I++ARVVFDRMP +NVVSWNAMITGYA N RL EAF+LF+RMPER+L SWNTMI
Sbjct: 209 FSRNGRIDEARVVFDRMPVQNVVSWNAMITGYAQNMRLNEAFELFERMPERNLSSWNTMI 268

Query: 365 TGFIK 379
           TGFI+
Sbjct: 269 TGFIQ 273



 Score =  119 bits (297), Expect = 6e-25
 Identities = 57/123 (46%), Positives = 84/123 (68%), Gaps = 1/123 (0%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLM-TERDVISWTAII 178
           +++GRI  A  +F++MP+R+VI+W  +IT  ++C  IEEA + FD    ++DVI+WT ++
Sbjct: 54  SKSGRIGDARQVFDEMPDRDVITWTTVITGYARCGMIEEARKLFDRADAKKDVITWTVMV 113

Query: 179 AGLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNT 358
            G     +I++A  +F  MP +NVVSWN MI GY  N R+  A  LF RMPER++ SWNT
Sbjct: 114 NGYLRLRRIKEAERLFFEMPVKNVVSWNTMIEGYFQNGRVNSALGLFDRMPERNVVSWNT 173

Query: 359 MIT 367
           +IT
Sbjct: 174 IIT 176



 Score =  102 bits (255), Expect = 4e-20
 Identities = 45/109 (41%), Positives = 74/109 (67%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIA 181
           ++NGRID A  +F++MP +NV+SWN +IT  ++  R+ EA   F+ M ER++ SW  +I 
Sbjct: 210 SRNGRIDEARVVFDRMPVQNVVSWNAMITGYAQNMRLNEAFELFERMPERNLSSWNTMIT 269

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRM 328
           G   NG++++A  +F++MPE+N +SW  MI+GY  + +  EA  +F +M
Sbjct: 270 GFIQNGELKRASNLFNKMPEKNSISWTTMISGYIQDGQNEEALKMFTKM 318


>ref|XP_006587960.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like isoform X2 [Glycine max]
           gi|571479769|ref|XP_006587961.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like isoform X3 [Glycine max]
           gi|571479771|ref|XP_003533693.2| PREDICTED:
           pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like isoform X1 [Glycine max]
          Length = 618

 Score =  185 bits (469), Expect = 7e-45
 Identities = 87/126 (69%), Positives = 103/126 (81%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIA 181
           A+NG    AL LF +MPERNV+SWN IITAL +C RIE+A R FD M +RDV+SWT ++A
Sbjct: 143 ARNGLTQQALDLFRRMPERNVVSWNTIITALVQCGRIEDAQRLFDQMKDRDVVSWTTMVA 202

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTM 361
           GL+ NG++E AR +FD+MP RNVVSWNAMITGYA N RL EA  LFQRMPERD+PSWNTM
Sbjct: 203 GLAKNGRVEDARALFDQMPVRNVVSWNAMITGYAQNRRLDEALQLFQRMPERDMPSWNTM 262

Query: 362 ITGFIK 379
           ITGFI+
Sbjct: 263 ITGFIQ 268



 Score =  115 bits (289), Expect = 5e-24
 Identities = 56/126 (44%), Positives = 83/126 (65%), Gaps = 1/126 (0%)
 Frame = +2

Query: 5   QNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLM-TERDVISWTAIIA 181
           + G ID A  +FE+MPER++  W  +IT   KC  I EA + FD    +++V++WTA++ 
Sbjct: 50  REGEIDYARKVFEEMPERDIGLWTTMITGYLKCGMIREARKLFDRWDAKKNVVTWTAMVN 109

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTM 361
           G     ++++A  +F  MP RNVVSWN M+ GYA N    +A DLF+RMPER++ SWNT+
Sbjct: 110 GYIKFNQVKEAERLFYEMPLRNVVSWNTMVDGYARNGLTQQALDLFRRMPERNVVSWNTI 169

Query: 362 ITGFIK 379
           IT  ++
Sbjct: 170 ITALVQ 175



 Score =  102 bits (254), Expect = 6e-20
 Identities = 47/109 (43%), Positives = 72/109 (66%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIA 181
           A+NGR++ A  LF++MP RNV+SWN +IT  ++  R++EA + F  M ERD+ SW  +I 
Sbjct: 205 AKNGRVEDARALFDQMPVRNVVSWNAMITGYAQNRRLDEALQLFQRMPERDMPSWNTMIT 264

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRM 328
           G   NG++ +A  +F  M E+NV++W AM+TGY  +    EA  +F +M
Sbjct: 265 GFIQNGELNRAEKLFGEMQEKNVITWTAMMTGYVQHGLSEEALRVFIKM 313



 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 36/87 (41%), Positives = 54/87 (62%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIA 181
           AQN R+D AL LF++MPER++ SWN +IT   +   +  A + F  M E++VI+WTA++ 
Sbjct: 236 AQNRRLDEALQLFQRMPERDMPSWNTMITGFIQNGELNRAEKLFGEMQEKNVITWTAMMT 295

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWN 262
           G   +G  E+A  VF +M   N +  N
Sbjct: 296 GYVQHGLSEEALRVFIKMLATNELKPN 322



 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
 Frame = +2

Query: 176 IAGLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRM-PERDLPSW 352
           I+ L   G+I+ AR VF+ MPER++  W  MITGY     + EA  LF R   ++++ +W
Sbjct: 45  ISRLCREGEIDYARKVFEEMPERDIGLWTTMITGYLKCGMIREARKLFDRWDAKKNVVTW 104

Query: 353 NTMITGFIK 379
             M+ G+IK
Sbjct: 105 TAMVNGYIK 113


>ref|XP_007028547.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           isoform 1 [Theobroma cacao]
           gi|590635100|ref|XP_007028548.1| Pentatricopeptide
           repeat (PPR) superfamily protein, putative isoform 1
           [Theobroma cacao] gi|508717152|gb|EOY09049.1|
           Pentatricopeptide repeat (PPR) superfamily protein,
           putative isoform 1 [Theobroma cacao]
           gi|508717153|gb|EOY09050.1| Pentatricopeptide repeat
           (PPR) superfamily protein, putative isoform 1 [Theobroma
           cacao]
          Length = 631

 Score =  183 bits (465), Expect = 2e-44
 Identities = 84/125 (67%), Positives = 106/125 (84%)
 Frame = +2

Query: 5   QNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIAG 184
           QNG +  A  LF++MPERNV+SWN ++TAL++C R+E+A   FD M +RDVISWTA++AG
Sbjct: 154 QNGMVGKAFELFQEMPERNVVSWNTMLTALAQCGRVEDARGLFDRMPKRDVISWTAMVAG 213

Query: 185 LSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTMI 364
           L+ NGKI++AR VFDRMPERNVVSWNAMITGY+ N +L EAF+LF+RMPER+L SWN MI
Sbjct: 214 LAKNGKIDEARRVFDRMPERNVVSWNAMITGYSQNMKLDEAFELFERMPERNLSSWNAMI 273

Query: 365 TGFIK 379
           TGFI+
Sbjct: 274 TGFIQ 278



 Score =  117 bits (294), Expect = 1e-24
 Identities = 56/122 (45%), Positives = 87/122 (71%), Gaps = 3/122 (2%)
 Frame = +2

Query: 11  GRIDSALYLFEKMPERN--VISWNKIITALSKCWRIEEACRFFDLM-TERDVISWTAIIA 181
           G+I     LF++MP+R+  VI+W  +I+   K   IEEA R FD + ++++V++WTA+++
Sbjct: 60  GKISQVRKLFDQMPDRDKDVITWTALISGYIKLGLIEEARRLFDRVDSKKNVVTWTAMLS 119

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTM 361
           G   + +I +A+ +FD MP +NVVSWN M+ GY  N  +G+AF+LFQ MPER++ SWNTM
Sbjct: 120 GYMRSNRILEAKRLFDEMPVKNVVSWNTMVDGYVQNGMVGKAFELFQEMPERNVVSWNTM 179

Query: 362 IT 367
           +T
Sbjct: 180 LT 181



 Score =  114 bits (286), Expect = 1e-23
 Identities = 51/113 (45%), Positives = 78/113 (69%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIA 181
           A+NG+ID A  +F++MPERNV+SWN +IT  S+  +++EA   F+ M ER++ SW A+I 
Sbjct: 215 AKNGKIDEARRVFDRMPERNVVSWNAMITGYSQNMKLDEAFELFERMPERNLSSWNAMIT 274

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERD 340
           G   NG++++A  +FD++P +NVVSW  MITGY  + +  EA  +F +M   D
Sbjct: 275 GFIQNGELKRAEKLFDKVPRKNVVSWTTMITGYVQDEQSEEALKIFSKMMAED 327



 Score =  104 bits (259), Expect = 1e-20
 Identities = 52/124 (41%), Positives = 77/124 (62%), Gaps = 1/124 (0%)
 Frame = +2

Query: 11  GRIDSALYLFEKMP-ERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIAGL 187
           G I+ A  LF+++  ++NV++W  +++   +  RI EA R FD M  ++V+SW  ++ G 
Sbjct: 93  GLIEEARRLFDRVDSKKNVVTWTAMLSGYMRSNRILEAKRLFDEMPVKNVVSWNTMVDGY 152

Query: 188 SGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTMIT 367
             NG + KA  +F  MPERNVVSWN M+T  A   R+ +A  LF RMP+RD+ SW  M+ 
Sbjct: 153 VQNGMVGKAFELFQEMPERNVVSWNTMLTALAQCGRVEDARGLFDRMPKRDVISWTAMVA 212

Query: 368 GFIK 379
           G  K
Sbjct: 213 GLAK 216



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 32/87 (36%), Positives = 53/87 (60%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIA 181
           +QN ++D A  LFE+MPERN+ SWN +IT   +   ++ A + FD +  ++V+SWT +I 
Sbjct: 246 SQNMKLDEAFELFERMPERNLSSWNAMITGFIQNGELKRAEKLFDKVPRKNVVSWTTMIT 305

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWN 262
           G   + + E+A  +F +M   + V  N
Sbjct: 306 GYVQDEQSEEALKIFSKMMAEDGVKPN 332


>ref|XP_007161435.1| hypothetical protein PHAVU_001G068400g [Phaseolus vulgaris]
           gi|561034899|gb|ESW33429.1| hypothetical protein
           PHAVU_001G068400g [Phaseolus vulgaris]
          Length = 616

 Score =  180 bits (457), Expect = 2e-43
 Identities = 82/126 (65%), Positives = 102/126 (80%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIA 181
           A+NG    AL LF +MPERNV+SWN IIT L +C ++++A R FD M ERDV+SWT ++A
Sbjct: 140 ARNGLTQQALDLFRRMPERNVVSWNTIITTLVQCGKVDDAQRLFDQMKERDVVSWTTMVA 199

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTM 361
           GLS NG++E AR +FD+MP RNVVSWN M+TGYA N RL EA +LFQRMPER++PSWNTM
Sbjct: 200 GLSKNGRVEDARALFDQMPVRNVVSWNVMVTGYAQNGRLNEALELFQRMPERNMPSWNTM 259

Query: 362 ITGFIK 379
           ITGFI+
Sbjct: 260 ITGFIQ 265



 Score =  113 bits (282), Expect = 3e-23
 Identities = 55/126 (43%), Positives = 84/126 (66%), Gaps = 1/126 (0%)
 Frame = +2

Query: 5   QNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFD-LMTERDVISWTAIIA 181
           ++G+ID A  +F+KM +R++  W  +I    KC  I EA + FD L  +++V++WTA+I 
Sbjct: 47  EDGKIDDARKVFDKMLDRDIGLWTTMINGYLKCGMIREARKLFDRLDAKKNVVTWTAMIK 106

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTM 361
           G     ++++A  +F  MP RNVVSWN M+ GYA N    +A DLF+RMPER++ SWNT+
Sbjct: 107 GYIRLNQVKEAERLFYEMPLRNVVSWNTMVDGYARNGLTQQALDLFRRMPERNVVSWNTI 166

Query: 362 ITGFIK 379
           IT  ++
Sbjct: 167 ITTLVQ 172



 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 47/124 (37%), Positives = 74/124 (59%), Gaps = 2/124 (1%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIA 181
           ++NGR++ A  LF++MP RNV+SWN ++T  ++  R+ EA   F  M ER++ SW  +I 
Sbjct: 202 SKNGRVEDARALFDQMPVRNVVSWNVMVTGYAQNGRLNEALELFQRMPERNMPSWNTMIT 261

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERD--LPSWN 355
           G   NG++  A  +F  M  +NV++W AM+TGY  +    EA  +F +M   D   P+  
Sbjct: 262 GFIQNGELNHAEKLFREMRVKNVITWTAMMTGYVQHGLSEEAVKVFNKMLAADGLKPNTG 321

Query: 356 TMIT 367
           T +T
Sbjct: 322 TFVT 325



 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 49/124 (39%), Positives = 76/124 (61%), Gaps = 1/124 (0%)
 Frame = +2

Query: 11  GRIDSALYLFEKMP-ERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIAGL 187
           G I  A  LF+++  ++NV++W  +I    +  +++EA R F  M  R+V+SW  ++ G 
Sbjct: 80  GMIREARKLFDRLDAKKNVVTWTAMIKGYIRLNQVKEAERLFYEMPLRNVVSWNTMVDGY 139

Query: 188 SGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTMIT 367
           + NG  ++A  +F RMPERNVVSWN +IT      ++ +A  LF +M ERD+ SW TM+ 
Sbjct: 140 ARNGLTQQALDLFRRMPERNVVSWNTIITTLVQCGKVDDAQRLFDQMKERDVVSWTTMVA 199

Query: 368 GFIK 379
           G  K
Sbjct: 200 GLSK 203


>ref|XP_007204422.1| hypothetical protein PRUPE_ppb002215mg [Prunus persica]
           gi|462399953|gb|EMJ05621.1| hypothetical protein
           PRUPE_ppb002215mg [Prunus persica]
          Length = 634

 Score =  180 bits (456), Expect = 2e-43
 Identities = 85/126 (67%), Positives = 104/126 (82%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIA 181
           A+N ++D AL LFE+MPE+NV+SWN ++TAL+   RIEEA   F+LM ERDVISWTA++A
Sbjct: 158 ARNCQVDMALELFERMPEKNVVSWNTVLTALAHSGRIEEARTRFNLMPERDVISWTAMVA 217

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTM 361
           G S NG I++AR  FDRMP+RNVVSWNAMITGY  N RL EA +LF+RMP RD+PSWNTM
Sbjct: 218 GFSRNGMIDEAREFFDRMPKRNVVSWNAMITGYTQNMRLDEALELFERMPGRDMPSWNTM 277

Query: 362 ITGFIK 379
           ITGFI+
Sbjct: 278 ITGFIQ 283



 Score =  112 bits (280), Expect = 5e-23
 Identities = 50/123 (40%), Positives = 87/123 (70%), Gaps = 1/123 (0%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLM-TERDVISWTAII 178
           +++G+   A  +F+ MP+++V++W  +IT   +C  +EEA   FD +  ++DVI+WTA++
Sbjct: 64  SKDGKFREARQVFDGMPDKDVVTWTTVITGYIRCGMMEEARSLFDRVDAKKDVITWTALV 123

Query: 179 AGLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNT 358
           +G     ++++A  +F +MP +NVVSWN MI GYA N ++  A +LF+RMPE+++ SWNT
Sbjct: 124 SGYIRLKQMKEAERLFYQMPVKNVVSWNTMIDGYARNCQVDMALELFERMPEKNVVSWNT 183

Query: 359 MIT 367
           ++T
Sbjct: 184 VLT 186



 Score =  102 bits (255), Expect = 4e-20
 Identities = 46/109 (42%), Positives = 72/109 (66%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIA 181
           ++NG ID A   F++MP+RNV+SWN +IT  ++  R++EA   F+ M  RD+ SW  +I 
Sbjct: 220 SRNGMIDEAREFFDRMPKRNVVSWNAMITGYTQNMRLDEALELFERMPGRDMPSWNTMIT 279

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRM 328
           G   NG +++A+ +F RMP++NV+SW  MITGY  + +  +A   F +M
Sbjct: 280 GFIQNGDLKRAQELFIRMPQKNVISWTTMITGYVQDGQNEKALMFFSKM 328



 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 36/86 (41%), Positives = 52/86 (60%)
 Frame = +2

Query: 5   QNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIAG 184
           QN R+D AL LFE+MP R++ SWN +IT   +   ++ A   F  M +++VISWT +I G
Sbjct: 252 QNMRLDEALELFERMPGRDMPSWNTMITGFIQNGDLKRAQELFIRMPQKNVISWTTMITG 311

Query: 185 LSGNGKIEKARVVFDRMPERNVVSWN 262
              +G+ EKA + F +M   N V  N
Sbjct: 312 YVQDGQNEKALMFFSKMLVDNGVKPN 337


>ref|XP_004498123.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g35030, mitochondrial-like [Cicer arietinum]
          Length = 665

 Score =  179 bits (453), Expect = 5e-43
 Identities = 86/126 (68%), Positives = 101/126 (80%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIA 181
           A+NGR   AL LF +MPERNV+SWN IITAL+   RI++A   F  M ERDV+SWT ++A
Sbjct: 154 ARNGRTQEALDLFRRMPERNVVSWNTIITALAHSGRIDDAQGIFSKMQERDVVSWTTMVA 213

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTM 361
           GLS NG+I+ AR +FDRMP RNVVSWNAMITGYA N RL EA  LF+RMPERD+PSWNTM
Sbjct: 214 GLSKNGRIDDARELFDRMPVRNVVSWNAMITGYAQNGRLDEALKLFERMPERDMPSWNTM 273

Query: 362 ITGFIK 379
           ITGFI+
Sbjct: 274 ITGFIQ 279



 Score =  120 bits (301), Expect = 2e-25
 Identities = 60/122 (49%), Positives = 83/122 (68%), Gaps = 1/122 (0%)
 Frame = +2

Query: 5   QNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLM-TERDVISWTAIIA 181
           + G+ID A  +F++M ER++  W  +I+   KC  I+EA + FD    E++VI WTA+++
Sbjct: 61  KQGKIDEARKVFDEMSERDICLWTTMISGYIKCGMIKEARKLFDRSDAEKNVIVWTAMVS 120

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTM 361
           G     +IE+A  +F  MP RNVVSWN MI GYA N R  EA DLF+RMPER++ SWNT+
Sbjct: 121 GYVKLNRIEEAERLFYEMPVRNVVSWNTMIDGYARNGRTQEALDLFRRMPERNVVSWNTI 180

Query: 362 IT 367
           IT
Sbjct: 181 IT 182



 Score =  112 bits (281), Expect = 4e-23
 Identities = 52/124 (41%), Positives = 80/124 (64%), Gaps = 2/124 (1%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIA 181
           ++NGRID A  LF++MP RNV+SWN +IT  ++  R++EA + F+ M ERD+ SW  +I 
Sbjct: 216 SKNGRIDDARELFDRMPVRNVVSWNAMITGYAQNGRLDEALKLFERMPERDMPSWNTMIT 275

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERD--LPSWN 355
           G   NG + +A  +FD MP++NV++W +M+TGY  +    EA  +F +M   D   P+  
Sbjct: 276 GFIQNGDLNRAEKLFDEMPQKNVITWTSMMTGYVQHGLSEEALKIFNKMQANDGLKPTTG 335

Query: 356 TMIT 367
           T +T
Sbjct: 336 TFVT 339



 Score =  107 bits (268), Expect = 1e-21
 Identities = 56/124 (45%), Positives = 79/124 (63%), Gaps = 1/124 (0%)
 Frame = +2

Query: 11  GRIDSALYLFEKMP-ERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIAGL 187
           G I  A  LF++   E+NVI W  +++   K  RIEEA R F  M  R+V+SW  +I G 
Sbjct: 94  GMIKEARKLFDRSDAEKNVIVWTAMVSGYVKLNRIEEAERLFYEMPVRNVVSWNTMIDGY 153

Query: 188 SGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTMIT 367
           + NG+ ++A  +F RMPERNVVSWN +IT  A++ R+ +A  +F +M ERD+ SW TM+ 
Sbjct: 154 ARNGRTQEALDLFRRMPERNVVSWNTIITALAHSGRIDDAQGIFSKMQERDVVSWTTMVA 213

Query: 368 GFIK 379
           G  K
Sbjct: 214 GLSK 217


>ref|XP_003589755.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355478803|gb|AES60006.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 891

 Score =  178 bits (451), Expect = 8e-43
 Identities = 82/126 (65%), Positives = 102/126 (80%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIA 181
           A+NGR   AL LF +MPERNV+SWN ++TAL+ C RI++A R F+ M ERDV+SWT ++A
Sbjct: 150 ARNGRTQEALDLFGRMPERNVVSWNTVMTALAHCGRIDDAERLFNEMRERDVVSWTTMVA 209

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTM 361
           GLS NG+++ AR VFD+MP RNVVSWNAMI GYA N R  EA  LF+RMPERD+PSWNTM
Sbjct: 210 GLSKNGRVDAAREVFDKMPIRNVVSWNAMIAGYAQNGRFDEALKLFERMPERDMPSWNTM 269

Query: 362 ITGFIK 379
           +TGFI+
Sbjct: 270 VTGFIQ 275



 Score =  111 bits (278), Expect = 9e-23
 Identities = 55/122 (45%), Positives = 80/122 (65%), Gaps = 1/122 (0%)
 Frame = +2

Query: 5   QNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLM-TERDVISWTAIIA 181
           + G+++ A  +F++M +R+   W  +I+   KC  I EA + FD    ++ VI WTA+++
Sbjct: 57  REGKVNEARKVFDEMSKRDSCLWTTMISGYIKCGLINEARKLFDRPDAQKSVIVWTAMVS 116

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTM 361
           G     +IE+A  +F+ MP RNVVSWN MI GYA N R  EA DLF RMPER++ SWNT+
Sbjct: 117 GYIKMNRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEALDLFGRMPERNVVSWNTV 176

Query: 362 IT 367
           +T
Sbjct: 177 MT 178



 Score =  108 bits (269), Expect = 1e-21
 Identities = 50/124 (40%), Positives = 78/124 (62%), Gaps = 2/124 (1%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIA 181
           ++NGR+D+A  +F+KMP RNV+SWN +I   ++  R +EA + F+ M ERD+ SW  ++ 
Sbjct: 212 SKNGRVDAAREVFDKMPIRNVVSWNAMIAGYAQNGRFDEALKLFERMPERDMPSWNTMVT 271

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERD--LPSWN 355
           G   NG + +A  +F  MP++NV++W AM+TGY  +    EA  LF +M   D   P+  
Sbjct: 272 GFIQNGDLNRAEQLFHAMPQKNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTG 331

Query: 356 TMIT 367
           T +T
Sbjct: 332 TFVT 335



 Score =  103 bits (256), Expect = 3e-20
 Identities = 54/124 (43%), Positives = 79/124 (63%), Gaps = 1/124 (0%)
 Frame = +2

Query: 11  GRIDSALYLFEKMP-ERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIAGL 187
           G I+ A  LF++   +++VI W  +++   K  RIEEA R F+ M  R+V+SW  +I G 
Sbjct: 90  GLINEARKLFDRPDAQKSVIVWTAMVSGYIKMNRIEEAERLFNEMPVRNVVSWNTMIDGY 149

Query: 188 SGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTMIT 367
           + NG+ ++A  +F RMPERNVVSWN ++T  A+  R+ +A  LF  M ERD+ SW TM+ 
Sbjct: 150 ARNGRTQEALDLFGRMPERNVVSWNTVMTALAHCGRIDDAERLFNEMRERDVVSWTTMVA 209

Query: 368 GFIK 379
           G  K
Sbjct: 210 GLSK 213


>ref|XP_002322628.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222867258|gb|EEF04389.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 559

 Score =  178 bits (451), Expect = 8e-43
 Identities = 81/125 (64%), Positives = 104/125 (83%)
 Frame = +2

Query: 5   QNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIAG 184
           +N  +D A+ +FE+M ERN++SWN +I AL +C R+EEA R FD M +RDVISWT ++ G
Sbjct: 81  KNREVDKAIEVFERMHERNMVSWNAVIAALVQCGRVEEARRRFDEMPKRDVISWTTMVMG 140

Query: 185 LSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTMI 364
           L+ +G++++AR VFDRMPERNVVSWNAM+TGYA N RL EAFDLF+RMPER+L SWNTMI
Sbjct: 141 LARSGRVDEARKVFDRMPERNVVSWNAMVTGYAKNMRLDEAFDLFERMPERNLSSWNTMI 200

Query: 365 TGFIK 379
           TGFI+
Sbjct: 201 TGFIQ 205



 Score =  122 bits (307), Expect = 4e-26
 Identities = 57/122 (46%), Positives = 83/122 (68%)
 Frame = +2

Query: 14  RIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIAGLSG 193
           RI+ A  LFE MP +NV+SWN +I    K   +++A   F+ M ER+++SW A+IA L  
Sbjct: 53  RIEEAERLFEVMPVKNVVSWNTMIDGYGKNREVDKAIEVFERMHERNMVSWNAVIAALVQ 112

Query: 194 NGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTMITGF 373
            G++E+AR  FD MP+R+V+SW  M+ G A + R+ EA  +F RMPER++ SWN M+TG+
Sbjct: 113 CGRVEEARRRFDEMPKRDVISWTTMVMGLARSGRVDEARKVFDRMPERNVVSWNAMVTGY 172

Query: 374 IK 379
            K
Sbjct: 173 AK 174



 Score =  107 bits (268), Expect = 1e-21
 Identities = 50/109 (45%), Positives = 71/109 (65%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIA 181
           A++GR+D A  +F++MPERNV+SWN ++T  +K  R++EA   F+ M ER++ SW  +I 
Sbjct: 142 ARSGRVDEARKVFDRMPERNVVSWNAMVTGYAKNMRLDEAFDLFERMPERNLSSWNTMIT 201

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRM 328
           G   NG++  AR VF+ MPE+NVVSW  MITGY        A  +F  M
Sbjct: 202 GFIQNGELAWARKVFNEMPEKNVVSWTTMITGYVQEGESESALKVFVEM 250



 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 46/112 (41%), Positives = 74/112 (66%), Gaps = 1/112 (0%)
 Frame = +2

Query: 47  MPERNVISWNKIITALSKCWRIEEACRFFDLMTE-RDVISWTAIIAGLSGNGKIEKARVV 223
           M ER+V++W  +I+   KC  I +A R FD +   +DV++WTA+++G     +IE+A  +
Sbjct: 1   MHERDVVTWTAVISGYIKCGLIVDARRLFDRVDAIKDVVTWTAMLSGYVRLKRIEEAERL 60

Query: 224 FDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTMITGFIK 379
           F+ MP +NVVSWN MI GY  N  + +A ++F+RM ER++ SWN +I   ++
Sbjct: 61  FEVMPVKNVVSWNTMIDGYGKNREVDKAIEVFERMHERNMVSWNAVIAALVQ 112



 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 49/124 (39%), Positives = 77/124 (62%), Gaps = 1/124 (0%)
 Frame = +2

Query: 11  GRIDSALYLFEKMPE-RNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIAGL 187
           G I  A  LF+++   ++V++W  +++   +  RIEEA R F++M  ++V+SW  +I G 
Sbjct: 20  GLIVDARRLFDRVDAIKDVVTWTAMLSGYVRLKRIEEAERLFEVMPVKNVVSWNTMIDGY 79

Query: 188 SGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTMIT 367
             N +++KA  VF+RM ERN+VSWNA+I       R+ EA   F  MP+RD+ SW TM+ 
Sbjct: 80  GKNREVDKAIEVFERMHERNMVSWNAVIAALVQCGRVEEARRRFDEMPKRDVISWTTMVM 139

Query: 368 GFIK 379
           G  +
Sbjct: 140 GLAR 143


>ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Cucumis sativus]
          Length = 649

 Score =  174 bits (441), Expect = 1e-41
 Identities = 83/126 (65%), Positives = 101/126 (80%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIA 181
           A+ G ID AL LFEKMPERNV+SWN +ITA  +  R++EA   F+ M ERDVISWT ++A
Sbjct: 171 ARKGWIDQALDLFEKMPERNVVSWNTVITAFMQRRRVDEAQELFNRMPERDVISWTTMVA 230

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTM 361
           GLS NG+I+ AR++FD+MP RNVVSWN MI GYA N RL EAF LF++MPER+L SWNTM
Sbjct: 231 GLSKNGRIDDARLLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTM 290

Query: 362 ITGFIK 379
           ITGFI+
Sbjct: 291 ITGFIQ 296



 Score =  126 bits (317), Expect = 3e-27
 Identities = 59/126 (46%), Positives = 88/126 (69%), Gaps = 1/126 (0%)
 Frame = +2

Query: 5   QNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTE-RDVISWTAIIA 181
           + G+I  A  +FE+MP+R+V+SW  +IT   KC  IEEA   FD     ++V++WTA+++
Sbjct: 78  KEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVS 137

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTM 361
           G     +IE+AR +FD MP +NV+SWN MI GYA    + +A DLF++MPER++ SWNT+
Sbjct: 138 GYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEKMPERNVVSWNTV 197

Query: 362 ITGFIK 379
           IT F++
Sbjct: 198 ITAFMQ 203



 Score =  114 bits (285), Expect = 1e-23
 Identities = 52/125 (41%), Positives = 82/125 (65%)
 Frame = +2

Query: 5   QNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIAG 184
           Q  R+D A  LF +MPER+VISW  ++  LSK  RI++A   FD M  R+V+SW  +I G
Sbjct: 203 QRRRVDEAQELFNRMPERDVISWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSWNTMIIG 262

Query: 185 LSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTMI 364
            + N ++++A  +F++MPER + SWN MITG+  N +L  A D F +M  +++ +W  +I
Sbjct: 263 YAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVI 322

Query: 365 TGFIK 379
           +G ++
Sbjct: 323 SGHVQ 327



 Score =  102 bits (255), Expect = 4e-20
 Identities = 48/109 (44%), Positives = 72/109 (66%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIA 181
           ++NGRID A  LF+KMP RNV+SWN +I   ++  R++EA + F+ M ER++ SW  +I 
Sbjct: 233 SKNGRIDDARLLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMIT 292

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRM 328
           G   NGK+E+A   F +M  +NVV+W A+I+G+  + R  EA  +F  M
Sbjct: 293 GFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIFSEM 341



 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 37/87 (42%), Positives = 55/87 (63%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIA 181
           AQN R+D A  LFE+MPER + SWN +IT   +  ++E A  FF  M+ ++V++WTA+I+
Sbjct: 264 AQNMRLDEAFKLFEQMPERELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVIS 323

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWN 262
           G   +G+ E+A  +F  M   N V  N
Sbjct: 324 GHVQDGRSEEALKIFSEMQAANNVKPN 350



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
 Frame = +2

Query: 134 DLMTERDVISWTAIIAGLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFD 313
           D     +V     +I  L   GKI +AR VF+ MP+R+VVSW A+ITGY     + EA  
Sbjct: 59  DFSANSNVARSNWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAKT 118

Query: 314 LFQRMPE-RDLPSWNTMITGFIK 379
           LF R    +++ +W  +++G+++
Sbjct: 119 LFDRNDAIKNVVTWTALVSGYVR 141


>ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g35030, mitochondrial-like [Cucumis sativus]
          Length = 649

 Score =  172 bits (435), Expect = 6e-41
 Identities = 82/126 (65%), Positives = 100/126 (79%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIA 181
           A+ G ID AL LFE MPERNV+SWN +ITA  +  R++EA   F+ M ERDVISWT ++A
Sbjct: 171 ARKGWIDQALDLFEXMPERNVVSWNTVITAFMQRRRVDEAQELFNRMPERDVISWTTMVA 230

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTM 361
           GLS NG+I+ AR++FD+MP RNVVSWN MI GYA N RL EAF LF++MPER+L SWNTM
Sbjct: 231 GLSKNGRIDDARLLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTM 290

Query: 362 ITGFIK 379
           ITGFI+
Sbjct: 291 ITGFIQ 296



 Score =  125 bits (314), Expect = 6e-27
 Identities = 59/126 (46%), Positives = 87/126 (69%), Gaps = 1/126 (0%)
 Frame = +2

Query: 5   QNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTE-RDVISWTAIIA 181
           + G+I  A  +FE+MP+R+V+SW  +IT   KC  IEEA   FD     ++V++WTA+++
Sbjct: 78  KEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVS 137

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTM 361
           G     +IE+AR +FD MP +NV+SWN MI GYA    + +A DLF+ MPER++ SWNT+
Sbjct: 138 GYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEXMPERNVVSWNTV 197

Query: 362 ITGFIK 379
           IT F++
Sbjct: 198 ITAFMQ 203



 Score =  114 bits (285), Expect = 1e-23
 Identities = 52/125 (41%), Positives = 82/125 (65%)
 Frame = +2

Query: 5   QNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIAG 184
           Q  R+D A  LF +MPER+VISW  ++  LSK  RI++A   FD M  R+V+SW  +I G
Sbjct: 203 QRRRVDEAQELFNRMPERDVISWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSWNTMIIG 262

Query: 185 LSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTMI 364
            + N ++++A  +F++MPER + SWN MITG+  N +L  A D F +M  +++ +W  +I
Sbjct: 263 YAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVI 322

Query: 365 TGFIK 379
           +G ++
Sbjct: 323 SGHVQ 327



 Score =  102 bits (255), Expect = 4e-20
 Identities = 48/109 (44%), Positives = 72/109 (66%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIA 181
           ++NGRID A  LF+KMP RNV+SWN +I   ++  R++EA + F+ M ER++ SW  +I 
Sbjct: 233 SKNGRIDDARLLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMIT 292

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRM 328
           G   NGK+E+A   F +M  +NVV+W A+I+G+  + R  EA  +F  M
Sbjct: 293 GFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIFSEM 341



 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 37/87 (42%), Positives = 55/87 (63%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIA 181
           AQN R+D A  LFE+MPER + SWN +IT   +  ++E A  FF  M+ ++V++WTA+I+
Sbjct: 264 AQNMRLDEAFKLFEQMPERELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVIS 323

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWN 262
           G   +G+ E+A  +F  M   N V  N
Sbjct: 324 GHVQDGRSEEALKIFSEMQAANNVKPN 350



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
 Frame = +2

Query: 134 DLMTERDVISWTAIIAGLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFD 313
           D     +V     +I  L   GKI +AR VF+ MP+R+VVSW A+ITGY     + EA  
Sbjct: 59  DFSANSNVARSNWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAKT 118

Query: 314 LFQRMPE-RDLPSWNTMITGFIK 379
           LF R    +++ +W  +++G+++
Sbjct: 119 LFDRNDAIKNVVTWTALVSGYVR 141


>ref|NP_181048.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75099187|sp|O64766.1|PP185_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g35030, mitochondrial; Flags: Precursor
           gi|3033399|gb|AAC12843.1| hypothetical protein
           [Arabidopsis thaliana] gi|209414526|gb|ACI46503.1|
           At2g35030 [Arabidopsis thaliana]
           gi|330253957|gb|AEC09051.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 627

 Score =  171 bits (433), Expect = 1e-40
 Identities = 79/126 (62%), Positives = 101/126 (80%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIA 181
           AQ+GRID AL LF++MPERN++SWN ++ AL +  RI+EA   F+ M  RDV+SWTA++ 
Sbjct: 151 AQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVD 210

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTM 361
           GL+ NGK+++AR +FD MPERN++SWNAMITGYA N R+ EA  LFQ MPERD  SWNTM
Sbjct: 211 GLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTM 270

Query: 362 ITGFIK 379
           ITGFI+
Sbjct: 271 ITGFIR 276



 Score =  137 bits (344), Expect = 2e-30
 Identities = 61/125 (48%), Positives = 89/125 (71%)
 Frame = +2

Query: 5   QNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIAG 184
           Q GRID A+ LFE+MP R+V+SW  ++  L+K  +++EA R FD M ER++ISW A+I G
Sbjct: 183 QRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITG 242

Query: 185 LSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTMI 364
            + N +I++A  +F  MPER+  SWN MITG+  N  + +A  LF RMPE+++ SW TMI
Sbjct: 243 YAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMI 302

Query: 365 TGFIK 379
           TG+++
Sbjct: 303 TGYVE 307



 Score =  114 bits (284), Expect = 2e-23
 Identities = 54/109 (49%), Positives = 74/109 (67%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIA 181
           A+NG++D A  LF+ MPERN+ISWN +IT  ++  RI+EA + F +M ERD  SW  +I 
Sbjct: 213 AKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMIT 272

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRM 328
           G   N ++ KA  +FDRMPE+NV+SW  MITGY  N    EA ++F +M
Sbjct: 273 GFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKM 321



 Score =  113 bits (282), Expect = 3e-23
 Identities = 52/124 (41%), Positives = 82/124 (66%), Gaps = 1/124 (0%)
 Frame = +2

Query: 11  GRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTER-DVISWTAIIAGL 187
           G+I  A  LF+ +PER+V++W  +IT   K   + EA   FD +  R +V++WTA+++G 
Sbjct: 60  GKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGY 119

Query: 188 SGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTMIT 367
             + ++  A ++F  MPERNVVSWN MI GYA + R+ +A +LF  MPER++ SWN+M+ 
Sbjct: 120 LRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVK 179

Query: 368 GFIK 379
             ++
Sbjct: 180 ALVQ 183



 Score = 92.0 bits (227), Expect = 8e-17
 Identities = 47/99 (47%), Positives = 66/99 (66%), Gaps = 1/99 (1%)
 Frame = +2

Query: 80  IITALSKCWRIEEACRFFDLMTERDVISWTAIIAGLSGNGKIEKARVVFDRMPER-NVVS 256
           +I  L K  +I EA + FD + ERDV++WT +I G    G + +AR +FDR+  R NVV+
Sbjct: 52  LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVT 111

Query: 257 WNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTMITGF 373
           W AM++GY  + +L  A  LFQ MPER++ SWNTMI G+
Sbjct: 112 WTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGY 150


>ref|XP_006410659.1| hypothetical protein EUTSA_v10016379mg [Eutrema salsugineum]
           gi|557111828|gb|ESQ52112.1| hypothetical protein
           EUTSA_v10016379mg [Eutrema salsugineum]
          Length = 626

 Score =  170 bits (430), Expect = 2e-40
 Identities = 81/126 (64%), Positives = 100/126 (79%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIA 181
           AQ+GRID AL LF++MPERN +SWN +I AL++  RI+EA   F+ M  RDVISWTA++ 
Sbjct: 150 AQSGRIDKALELFDEMPERNTVSWNTLIKALAQLGRIQEAMNLFERMPTRDVISWTAMVD 209

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTM 361
           GL  NGK+++AR VFD MPERN +SWNAMITGYA+N R+ EA  LFQ MPER+  SWNTM
Sbjct: 210 GLGKNGKVDEARRVFDCMPERNTISWNAMITGYAHNNRIEEADQLFQVMPERNFASWNTM 269

Query: 362 ITGFIK 379
           ITGFI+
Sbjct: 270 ITGFIR 275



 Score =  107 bits (268), Expect = 1e-21
 Identities = 51/108 (47%), Positives = 70/108 (64%)
 Frame = +2

Query: 5   QNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIAG 184
           +NG++D A  +F+ MPERN ISWN +IT  +   RIEEA + F +M ER+  SW  +I G
Sbjct: 213 KNGKVDEARRVFDCMPERNTISWNAMITGYAHNNRIEEADQLFQVMPERNFASWNTMITG 272

Query: 185 LSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRM 328
              NG+I +A  +FDRMP++NV+SW  MITGY  N    +A  +F  M
Sbjct: 273 FIRNGEINRACGLFDRMPQKNVISWTTMITGYVQNKENEDALKVFSNM 320



 Score =  104 bits (260), Expect = 1e-20
 Identities = 50/121 (41%), Positives = 75/121 (61%), Gaps = 1/121 (0%)
 Frame = +2

Query: 5   QNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTER-DVISWTAIIA 181
           + GRI  A  +F+++P+R+  +W  +IT   K   + EA   FD    R +V++WTA+++
Sbjct: 57  KEGRIAEARKVFDRLPQRDEYTWTDVITGYIKLGNMREARELFDRADARKNVVTWTAMVS 116

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTM 361
           G     +   A ++F  MPERN VSWN MI GYA + R+ +A +LF  MPER+  SWNT+
Sbjct: 117 GYLRAKQFSAAEMLFQEMPERNEVSWNTMIDGYAQSGRIDKALELFDEMPERNTVSWNTL 176

Query: 362 I 364
           I
Sbjct: 177 I 177



 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 49/124 (39%), Positives = 73/124 (58%), Gaps = 1/124 (0%)
 Frame = +2

Query: 11  GRIDSALYLFEKMPER-NVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIAGL 187
           G +  A  LF++   R NV++W  +++   +  +   A   F  M ER+ +SW  +I G 
Sbjct: 90  GNMREARELFDRADARKNVVTWTAMVSGYLRAKQFSAAEMLFQEMPERNEVSWNTMIDGY 149

Query: 188 SGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTMIT 367
           + +G+I+KA  +FD MPERN VSWN +I   A   R+ EA +LF+RMP RD+ SW  M+ 
Sbjct: 150 AQSGRIDKALELFDEMPERNTVSWNTLIKALAQLGRIQEAMNLFERMPTRDVISWTAMVD 209

Query: 368 GFIK 379
           G  K
Sbjct: 210 GLGK 213



 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 45/99 (45%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
 Frame = +2

Query: 80  IITALSKCWRIEEACRFFDLMTERDVISWTAIIAGLSGNGKIEKARVVFDRMPER-NVVS 256
           +I  L K  RI EA + FD + +RD  +WT +I G    G + +AR +FDR   R NVV+
Sbjct: 51  LIKKLCKEGRIAEARKVFDRLPQRDEYTWTDVITGYIKLGNMREARELFDRADARKNVVT 110

Query: 257 WNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTMITGF 373
           W AM++GY    +   A  LFQ MPER+  SWNTMI G+
Sbjct: 111 WTAMVSGYLRAKQFSAAEMLFQEMPERNEVSWNTMIDGY 149



 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 52/163 (31%), Positives = 70/163 (42%), Gaps = 42/163 (25%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIA 181
           A N RI+ A  LF+ MPERN  SWN +IT   +   I  AC  FD M +++VISWT +I 
Sbjct: 243 AHNNRIEEADQLFQVMPERNFASWNTMITGFIRNGEINRACGLFDRMPQKNVISWTTMIT 302

Query: 182 GLSGNGKIEKARVVFDRM----------------------------------------PE 241
           G   N + E A  VF  M                                         +
Sbjct: 303 GYVQNKENEDALKVFSNMLRDGCVKPNEGTYVSILSACSDMAGLVEGQQIHQLISKSVHQ 362

Query: 242 RNVVSWNAMITGYANNFRLGEAFDLFQR--MPERDLPSWNTMI 364
           RN +  +A+I  Y+    L  A  +F    + +RDL SWN+MI
Sbjct: 363 RNELVTSAIINMYSKCGELIAARKIFDAGLVSQRDLISWNSMI 405


>ref|XP_006296159.1| hypothetical protein CARUB_v10025312mg [Capsella rubella]
           gi|482564867|gb|EOA29057.1| hypothetical protein
           CARUB_v10025312mg [Capsella rubella]
          Length = 636

 Score =  169 bits (428), Expect = 4e-40
 Identities = 79/126 (62%), Positives = 100/126 (79%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIA 181
           AQ+GRID AL LF++MPE+N++SWN ++ AL +  RI+EA   F  M  RDVISWTA++ 
Sbjct: 160 AQSGRIDKALELFDEMPEKNIVSWNTMMKALVQRGRIDEAMNLFQRMPRRDVISWTAMVD 219

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTM 361
           GL+ NGK++ AR +FD MPERN++SWNAMITGYA+N R+ EA  LFQ MPERD  SWNTM
Sbjct: 220 GLAKNGKVDDARQLFDSMPERNIISWNAMITGYAHNNRIDEADQLFQVMPERDFASWNTM 279

Query: 362 ITGFIK 379
           ITGFI+
Sbjct: 280 ITGFIR 285



 Score =  115 bits (288), Expect = 6e-24
 Identities = 54/109 (49%), Positives = 71/109 (65%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIA 181
           A+NG++D A  LF+ MPERN+ISWN +IT  +   RI+EA + F +M ERD  SW  +I 
Sbjct: 222 AKNGKVDDARQLFDSMPERNIISWNAMITGYAHNNRIDEADQLFQVMPERDFASWNTMIT 281

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRM 328
           G   N  I +A V+FDRMPE+NV+SW  MITGY  N    +A   F +M
Sbjct: 282 GFIRNKNINRASVLFDRMPEKNVISWTTMITGYVENKENEDALKFFSKM 330



 Score =  113 bits (283), Expect = 2e-23
 Identities = 51/126 (40%), Positives = 83/126 (65%), Gaps = 1/126 (0%)
 Frame = +2

Query: 5   QNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTER-DVISWTAIIA 181
           + GRI  A  LF+ +PER+V++W  +IT   K   + EA   FD +  R +V++WTA+++
Sbjct: 67  REGRIVEARKLFDGLPERDVVTWTDVITGYIKLGNMREARELFDRVDSRKNVVTWTAMVS 126

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTM 361
           G   + ++  A ++F  MPERN+VSWN M+ GYA + R+ +A +LF  MPE+++ SWNTM
Sbjct: 127 GYLRSKQLSVAEMLFQDMPERNIVSWNTMVDGYAQSGRIDKALELFDEMPEKNIVSWNTM 186

Query: 362 ITGFIK 379
           +   ++
Sbjct: 187 MKALVQ 192



 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 46/99 (46%), Positives = 66/99 (66%), Gaps = 1/99 (1%)
 Frame = +2

Query: 80  IITALSKCWRIEEACRFFDLMTERDVISWTAIIAGLSGNGKIEKARVVFDRMPER-NVVS 256
           +I  L +  RI EA + FD + ERDV++WT +I G    G + +AR +FDR+  R NVV+
Sbjct: 61  LIGELCREGRIVEARKLFDGLPERDVVTWTDVITGYIKLGNMREARELFDRVDSRKNVVT 120

Query: 257 WNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTMITGF 373
           W AM++GY  + +L  A  LFQ MPER++ SWNTM+ G+
Sbjct: 121 WTAMVSGYLRSKQLSVAEMLFQDMPERNIVSWNTMVDGY 159



 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 51/163 (31%), Positives = 70/163 (42%), Gaps = 42/163 (25%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIA 181
           A N RID A  LF+ MPER+  SWN +IT   +   I  A   FD M E++VISWT +I 
Sbjct: 253 AHNNRIDEADQLFQVMPERDFASWNTMITGFIRNKNINRASVLFDRMPEKNVISWTTMIT 312

Query: 182 GLSGNGKIEKARVVFDRM----------------------------------------PE 241
           G   N + E A   F +M                                         +
Sbjct: 313 GYVENKENEDALKFFSKMLRDGYVKPNVGTYVSILSACSDSAGLVEGQQIHQLISKSVHQ 372

Query: 242 RNVVSWNAMITGYANNFRLGEAFDLFQR--MPERDLPSWNTMI 364
           +N V  +A+I  Y+ +  L  A  +F    + +RDL SWN+MI
Sbjct: 373 KNEVVISALINMYSKSGELIAARKMFDNGLVCQRDLISWNSMI 415


>ref|XP_004237347.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Solanum lycopersicum]
          Length = 624

 Score =  166 bits (419), Expect = 4e-39
 Identities = 80/126 (63%), Positives = 98/126 (77%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIA 181
           A+NGRID  L LF KM ERNV+SWN +I  L++  RI EA   FD M E++V+SWT +IA
Sbjct: 157 ARNGRIDKGLELFWKMGERNVVSWNMVIAGLAQNGRINEARVLFDQMPEKNVVSWTTMIA 216

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTM 361
           GLS NG++E+AR +FDR PERNVVSWNAMITGY  N RL EAF+LF+ MPE+ + SWNTM
Sbjct: 217 GLSRNGRVEEARTLFDRTPERNVVSWNAMITGYTQNSRLDEAFELFEIMPEKIVSSWNTM 276

Query: 362 ITGFIK 379
           I GFI+
Sbjct: 277 IMGFIQ 282



 Score =  134 bits (336), Expect = 2e-29
 Identities = 64/124 (51%), Positives = 87/124 (70%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIA 181
           A+  RI  A  LF +MPE+NV+SWN +I   ++  RI++    F  M ER+V+SW  +IA
Sbjct: 126 ARMNRILEAEMLFNEMPEKNVVSWNSLIDGYARNGRIDKGLELFWKMGERNVVSWNMVIA 185

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTM 361
           GL+ NG+I +ARV+FD+MPE+NVVSW  MI G + N R+ EA  LF R PER++ SWN M
Sbjct: 186 GLAQNGRINEARVLFDQMPEKNVVSWTTMIAGLSRNGRVEEARTLFDRTPERNVVSWNAM 245

Query: 362 ITGF 373
           ITG+
Sbjct: 246 ITGY 249



 Score =  129 bits (324), Expect = 4e-28
 Identities = 61/125 (48%), Positives = 87/125 (69%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIA 181
           AQNGRI+ A  LF++MPE+NV+SW  +I  LS+  R+EEA   FD   ER+V+SW A+I 
Sbjct: 188 AQNGRINEARVLFDQMPEKNVVSWTTMIAGLSRNGRVEEARTLFDRTPERNVVSWNAMIT 247

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTM 361
           G + N ++++A  +F+ MPE+ V SWN MI G+  N  LG A  LF +M +RD+ SW+TM
Sbjct: 248 GYTQNSRLDEAFELFEIMPEKIVSSWNTMIMGFIQNGELGRARILFDKMRQRDVVSWSTM 307

Query: 362 ITGFI 376
           I G++
Sbjct: 308 INGYM 312



 Score =  115 bits (287), Expect = 8e-24
 Identities = 52/124 (41%), Positives = 86/124 (69%), Gaps = 1/124 (0%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLM-TERDVISWTAII 178
           ++ G++D A  LF+KM E +V+SW  +I+   +C +I++A   FD    +RDV++WTA++
Sbjct: 63  SKEGQVDEARKLFDKMSEPDVVSWTAMISGYIRCGKIDKARELFDRTDAKRDVVTWTAMV 122

Query: 179 AGLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNT 358
           A  +   +I +A ++F+ MPE+NVVSWN++I GYA N R+ +  +LF +M ER++ SWN 
Sbjct: 123 AAYARMNRILEAEMLFNEMPEKNVVSWNSLIDGYARNGRIDKGLELFWKMGERNVVSWNM 182

Query: 359 MITG 370
           +I G
Sbjct: 183 VIAG 186



 Score =  108 bits (270), Expect = 8e-22
 Identities = 54/121 (44%), Positives = 82/121 (67%), Gaps = 1/121 (0%)
 Frame = +2

Query: 11  GRIDSALYLFEKMP-ERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIAGL 187
           G+ID A  LF++   +R+V++W  ++ A ++  RI EA   F+ M E++V+SW ++I G 
Sbjct: 97  GKIDKARELFDRTDAKRDVVTWTAMVAAYARMNRILEAEMLFNEMPEKNVVSWNSLIDGY 156

Query: 188 SGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTMIT 367
           + NG+I+K   +F +M ERNVVSWN +I G A N R+ EA  LF +MPE+++ SW TMI 
Sbjct: 157 ARNGRIDKGLELFWKMGERNVVSWNMVIAGLAQNGRINEARVLFDQMPEKNVVSWTTMIA 216

Query: 368 G 370
           G
Sbjct: 217 G 217



 Score =  102 bits (254), Expect = 6e-20
 Identities = 48/109 (44%), Positives = 73/109 (66%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIA 181
           ++NGR++ A  LF++ PERNV+SWN +IT  ++  R++EA   F++M E+ V SW  +I 
Sbjct: 219 SRNGRVEEARTLFDRTPERNVVSWNAMITGYTQNSRLDEAFELFEIMPEKIVSSWNTMIM 278

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRM 328
           G   NG++ +AR++FD+M +R+VVSW+ MI GY    R  EA   F  M
Sbjct: 279 GFIQNGELGRARILFDKMRQRDVVSWSTMINGYMLKGRSEEALRNFCEM 327



 Score = 99.8 bits (247), Expect = 4e-19
 Identities = 50/103 (48%), Positives = 74/103 (71%), Gaps = 1/103 (0%)
 Frame = +2

Query: 74  NKIITALSKCWRIEEACRFFDLMTERDVISWTAIIAGLSGNGKIEKARVVFDRM-PERNV 250
           N+II+ LSK  +++EA + FD M+E DV+SWTA+I+G    GKI+KAR +FDR   +R+V
Sbjct: 56  NRIISKLSKEGQVDEARKLFDKMSEPDVVSWTAMISGYIRCGKIDKARELFDRTDAKRDV 115

Query: 251 VSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTMITGFIK 379
           V+W AM+  YA   R+ EA  LF  MPE+++ SWN++I G+ +
Sbjct: 116 VTWTAMVAAYARMNRILEAEMLFNEMPEKNVVSWNSLIDGYAR 158



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 34/109 (31%), Positives = 62/109 (56%), Gaps = 7/109 (6%)
 Frame = +2

Query: 74  NKIITALSKCWRIEEACRFFDLMTE------RDVISWTAIIAGLSGNGKIEKARVVFDRM 235
           N ++   +K   I ++ + + L+        +DV     II+ LS  G++++AR +FD+M
Sbjct: 19  NSVLKLQTKLQFINQSIKHYSLLPRVDYTCNQDVSRSNRIISKLSKEGQVDEARKLFDKM 78

Query: 236 PERNVVSWNAMITGYANNFRLGEAFDLFQRM-PERDLPSWNTMITGFIK 379
            E +VVSW AMI+GY    ++ +A +LF R   +RD+ +W  M+  + +
Sbjct: 79  SEPDVVSWTAMISGYIRCGKIDKARELFDRTDAKRDVVTWTAMVAAYAR 127


>ref|XP_002881370.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297327209|gb|EFH57629.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 627

 Score =  166 bits (419), Expect = 4e-39
 Identities = 79/126 (62%), Positives = 99/126 (78%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIA 181
           AQ+GRID AL LF++MPERN +SWN +I AL +  RI+EA   F+ M  +DVISWTA++ 
Sbjct: 151 AQSGRIDKALELFDEMPERNTVSWNTMIKALVQRGRIDEAMNLFERMPIKDVISWTAMVD 210

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTM 361
           GL+ NGK+++AR +FD MPERN++SWNAMITGY  N R+ EA  LFQ MPERD  SWNTM
Sbjct: 211 GLAKNGKVDEARRLFDCMPERNIISWNAMITGYTYNNRIDEADQLFQVMPERDFASWNTM 270

Query: 362 ITGFIK 379
           ITGFI+
Sbjct: 271 ITGFIR 276



 Score =  113 bits (283), Expect = 2e-23
 Identities = 52/124 (41%), Positives = 80/124 (64%), Gaps = 1/124 (0%)
 Frame = +2

Query: 11  GRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTER-DVISWTAIIAGL 187
           G++  A  LF+ +PER+V++W  +IT   K   + EA   FD +  R +V++WTA+++G 
Sbjct: 60  GKLAEARKLFDGLPERDVVTWTDVITGYIKLGNMREARELFDRVDSRKNVVTWTAMVSGY 119

Query: 188 SGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTMIT 367
             + ++  A  +F  MPERN+VSWN MI GYA + R+ +A +LF  MPER+  SWNTMI 
Sbjct: 120 LRSKQLSVAETLFQEMPERNIVSWNTMIDGYAQSGRIDKALELFDEMPERNTVSWNTMIK 179

Query: 368 GFIK 379
             ++
Sbjct: 180 ALVQ 183



 Score =  112 bits (280), Expect = 5e-23
 Identities = 54/109 (49%), Positives = 73/109 (66%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIA 181
           A+NG++D A  LF+ MPERN+ISWN +IT  +   RI+EA + F +M ERD  SW  +I 
Sbjct: 213 AKNGKVDEARRLFDCMPERNIISWNAMITGYTYNNRIDEADQLFQVMPERDFASWNTMIT 272

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRM 328
           G   N +I +A  +FDRMP++NV+SW AMITGY  N    EA  +F +M
Sbjct: 273 GFIRNREINRACGLFDRMPQKNVISWTAMITGYVENKENEEALKVFSKM 321



 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 46/99 (46%), Positives = 66/99 (66%), Gaps = 1/99 (1%)
 Frame = +2

Query: 80  IITALSKCWRIEEACRFFDLMTERDVISWTAIIAGLSGNGKIEKARVVFDRMPER-NVVS 256
           +I  L K  ++ EA + FD + ERDV++WT +I G    G + +AR +FDR+  R NVV+
Sbjct: 52  LIGKLCKVGKLAEARKLFDGLPERDVVTWTDVITGYIKLGNMREARELFDRVDSRKNVVT 111

Query: 257 WNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTMITGF 373
           W AM++GY  + +L  A  LFQ MPER++ SWNTMI G+
Sbjct: 112 WTAMVSGYLRSKQLSVAETLFQEMPERNIVSWNTMIDGY 150


>ref|XP_006340092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Solanum tuberosum]
          Length = 641

 Score =  164 bits (416), Expect = 9e-39
 Identities = 78/126 (61%), Positives = 98/126 (77%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIA 181
           A+NGRID  L LF KM ERNV+SWN +I  L++  RI EA   FD M E++V+SWT +IA
Sbjct: 157 ARNGRIDKGLELFWKMRERNVVSWNMVIAGLARNGRINEARVLFDQMPEKNVVSWTTMIA 216

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTM 361
           GLS NG++++AR +FDR PERNVVSWNAMITGY  N +L EAF+LF+ MPE+ + SWNTM
Sbjct: 217 GLSRNGRVDEARTLFDRTPERNVVSWNAMITGYTQNSKLDEAFELFEMMPEKIVSSWNTM 276

Query: 362 ITGFIK 379
           I GFI+
Sbjct: 277 IMGFIQ 282



 Score =  135 bits (340), Expect = 6e-30
 Identities = 64/124 (51%), Positives = 87/124 (70%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIA 181
           A+  RI  A  LF +MPE+NV+SWN +I   ++  RI++    F  M ER+V+SW  +IA
Sbjct: 126 ARTNRILEAEMLFNEMPEKNVVSWNSLIDGYARNGRIDKGLELFWKMRERNVVSWNMVIA 185

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTM 361
           GL+ NG+I +ARV+FD+MPE+NVVSW  MI G + N R+ EA  LF R PER++ SWN M
Sbjct: 186 GLARNGRINEARVLFDQMPEKNVVSWTTMIAGLSRNGRVDEARTLFDRTPERNVVSWNAM 245

Query: 362 ITGF 373
           ITG+
Sbjct: 246 ITGY 249



 Score =  129 bits (323), Expect = 6e-28
 Identities = 60/126 (47%), Positives = 88/126 (69%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIA 181
           A+NGRI+ A  LF++MPE+NV+SW  +I  LS+  R++EA   FD   ER+V+SW A+I 
Sbjct: 188 ARNGRINEARVLFDQMPEKNVVSWTTMIAGLSRNGRVDEARTLFDRTPERNVVSWNAMIT 247

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTM 361
           G + N K+++A  +F+ MPE+ V SWN MI G+  N  LG A  LF +M +RD+ SW+TM
Sbjct: 248 GYTQNSKLDEAFELFEMMPEKIVSSWNTMIMGFIQNGELGRARILFDKMRQRDVVSWSTM 307

Query: 362 ITGFIK 379
           I G+++
Sbjct: 308 INGYMQ 313



 Score =  115 bits (289), Expect = 5e-24
 Identities = 52/127 (40%), Positives = 87/127 (68%), Gaps = 1/127 (0%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLM-TERDVISWTAII 178
           ++ G++D A  LF+KM E +V+SW  +I+   +C +I++A   FD    +RDV++WTA++
Sbjct: 63  SKEGQVDEARKLFDKMSEPDVVSWTAMISGYIRCGKIDKARELFDRTDAKRDVVTWTAML 122

Query: 179 AGLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNT 358
           A  +   +I +A ++F+ MPE+NVVSWN++I GYA N R+ +  +LF +M ER++ SWN 
Sbjct: 123 AAYARTNRILEAEMLFNEMPEKNVVSWNSLIDGYARNGRIDKGLELFWKMRERNVVSWNM 182

Query: 359 MITGFIK 379
           +I G  +
Sbjct: 183 VIAGLAR 189



 Score =  108 bits (269), Expect = 1e-21
 Identities = 54/121 (44%), Positives = 82/121 (67%), Gaps = 1/121 (0%)
 Frame = +2

Query: 11  GRIDSALYLFEKMP-ERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIAGL 187
           G+ID A  LF++   +R+V++W  ++ A ++  RI EA   F+ M E++V+SW ++I G 
Sbjct: 97  GKIDKARELFDRTDAKRDVVTWTAMLAAYARTNRILEAEMLFNEMPEKNVVSWNSLIDGY 156

Query: 188 SGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTMIT 367
           + NG+I+K   +F +M ERNVVSWN +I G A N R+ EA  LF +MPE+++ SW TMI 
Sbjct: 157 ARNGRIDKGLELFWKMRERNVVSWNMVIAGLARNGRINEARVLFDQMPEKNVVSWTTMIA 216

Query: 368 G 370
           G
Sbjct: 217 G 217



 Score =  103 bits (256), Expect = 3e-20
 Identities = 47/106 (44%), Positives = 72/106 (67%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIA 181
           ++NGR+D A  LF++ PERNV+SWN +IT  ++  +++EA   F++M E+ V SW  +I 
Sbjct: 219 SRNGRVDEARTLFDRTPERNVVSWNAMITGYTQNSKLDEAFELFEMMPEKIVSSWNTMIM 278

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLF 319
           G   NG++ +AR++FD+M +R+VVSW+ MI GY    R  EA   F
Sbjct: 279 GFIQNGELGRARILFDKMRQRDVVSWSTMINGYMQEGRSEEALRNF 324



 Score =  100 bits (248), Expect = 3e-19
 Identities = 50/103 (48%), Positives = 74/103 (71%), Gaps = 1/103 (0%)
 Frame = +2

Query: 74  NKIITALSKCWRIEEACRFFDLMTERDVISWTAIIAGLSGNGKIEKARVVFDRM-PERNV 250
           N+II+ LSK  +++EA + FD M+E DV+SWTA+I+G    GKI+KAR +FDR   +R+V
Sbjct: 56  NRIISKLSKEGQVDEARKLFDKMSEPDVVSWTAMISGYIRCGKIDKARELFDRTDAKRDV 115

Query: 251 VSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTMITGFIK 379
           V+W AM+  YA   R+ EA  LF  MPE+++ SWN++I G+ +
Sbjct: 116 VTWTAMLAAYARTNRILEAEMLFNEMPEKNVVSWNSLIDGYAR 158



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 31/83 (37%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
 Frame = +2

Query: 134 DLMTERDVISWTAIIAGLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFD 313
           D    +DV     II+ LS  G++++AR +FD+M E +VVSW AMI+GY    ++ +A +
Sbjct: 45  DYTCNQDVSRSNRIISKLSKEGQVDEARKLFDKMSEPDVVSWTAMISGYIRCGKIDKARE 104

Query: 314 LFQRM-PERDLPSWNTMITGFIK 379
           LF R   +RD+ +W  M+  + +
Sbjct: 105 LFDRTDAKRDVVTWTAMLAAYAR 127


>ref|XP_002529164.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531388|gb|EEF33223.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 453

 Score =  160 bits (406), Expect = 1e-37
 Identities = 83/163 (50%), Positives = 106/163 (65%), Gaps = 38/163 (23%)
 Frame = +2

Query: 5   QNGRIDSALYLFEKMPERNVISWNKIITALSKC---------------------W----- 106
           + G+I+ A  +F++M ER+VI+W  +IT   KC                     W     
Sbjct: 67  REGKINEARQVFDRMLERDVITWTTVITGYIKCRLIVEARRLFDRADAMKNVVTWTAMVS 126

Query: 107 ------------RIEEACRFFDLMTERDVISWTAIIAGLSGNGKIEKARVVFDRMPERNV 250
                       R++EA R FD M +RDVISWTA++AGL+ NG+I++AR +FD+MPERNV
Sbjct: 127 GYMRLNQVLEAERVDEARRLFDEMPKRDVISWTAMVAGLARNGRIDEARKIFDKMPERNV 186

Query: 251 VSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTMITGFIK 379
           VSWNAMITGYA N RL EAF+LF+RMPERDLPSWNTMITGFI+
Sbjct: 187 VSWNAMITGYAKNMRLVEAFELFERMPERDLPSWNTMITGFIQ 229



 Score =  123 bits (309), Expect = 2e-26
 Identities = 57/122 (46%), Positives = 86/122 (70%)
 Frame = +2

Query: 14  RIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIAGLSG 193
           R+D A  LF++MP+R+VISW  ++  L++  RI+EA + FD M ER+V+SW A+I G + 
Sbjct: 139 RVDEARRLFDEMPKRDVISWTAMVAGLARNGRIDEARKIFDKMPERNVVSWNAMITGYAK 198

Query: 194 NGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTMITGF 373
           N ++ +A  +F+RMPER++ SWN MITG+  N  L  A  L   MPE+++ SW TMITG+
Sbjct: 199 NMRLVEAFELFERMPERDLPSWNTMITGFIQNKELKLARKLLDEMPEKNVVSWTTMITGY 258

Query: 374 IK 379
           ++
Sbjct: 259 VQ 260



 Score =  110 bits (276), Expect = 2e-22
 Identities = 53/109 (48%), Positives = 70/109 (64%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIA 181
           A+NGRID A  +F+KMPERNV+SWN +IT  +K  R+ EA   F+ M ERD+ SW  +I 
Sbjct: 166 ARNGRIDEARKIFDKMPERNVVSWNAMITGYAKNMRLVEAFELFERMPERDLPSWNTMIT 225

Query: 182 GLSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRM 328
           G   N +++ AR + D MPE+NVVSW  MITGY        A ++F  M
Sbjct: 226 GFIQNKELKLARKLLDEMPEKNVVSWTTMITGYVQEGESEAALNIFMEM 274


>gb|EYU18647.1| hypothetical protein MIMGU_mgv1a022303mg, partial [Mimulus
           guttatus]
          Length = 539

 Score =  156 bits (394), Expect = 3e-36
 Identities = 71/125 (56%), Positives = 99/125 (79%)
 Frame = +2

Query: 5   QNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIAG 184
           ++GRI+ AL +F++M ERNV+SWN +I+ L  C RI+EA  FF     ++VISWT +I+G
Sbjct: 81  RSGRIEHALTVFDEMGERNVVSWNTVISGLVNCGRIDEAMGFFSRTPLKNVISWTIMISG 140

Query: 185 LSGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTMI 364
           L+ N ++++AR++FD +PERNVVSWNAMITGYA N RL EA++LF++MPE+D  SWN MI
Sbjct: 141 LARNKRVDEARLLFDTVPERNVVSWNAMITGYAQNTRLSEAYNLFKKMPEKDAQSWNAMI 200

Query: 365 TGFIK 379
           T FI+
Sbjct: 201 TAFIQ 205



 Score =  101 bits (252), Expect = 1e-19
 Identities = 46/111 (41%), Positives = 74/111 (66%), Gaps = 1/111 (0%)
 Frame = +2

Query: 47  MPERNVISWNKIITALSKCWRIEEACRFFDLM-TERDVISWTAIIAGLSGNGKIEKARVV 223
           MP+R+VISW  +I+   KC  ++EA   FD    ++DV++WT++I+G   + +I +A  +
Sbjct: 1   MPDRDVISWTALISGYVKCGLVKEARELFDRADAKKDVVTWTSMISGYLKSKRISEAERL 60

Query: 224 FDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTMITGFI 376
           F  MP++NVV+WN MI GY  + R+  A  +F  M ER++ SWNT+I+G +
Sbjct: 61  FHAMPDKNVVTWNTMIDGYVRSGRIEHALTVFDEMGERNVVSWNTVISGLV 111



 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 51/110 (46%), Positives = 69/110 (62%), Gaps = 1/110 (0%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIA 181
           A+N R+D A  LF+ +PERNV+SWN +IT  ++  R+ EA   F  M E+D  SW A+I 
Sbjct: 142 ARNKRVDEARLLFDTVPERNVVSWNAMITGYAQNTRLSEAYNLFKKMPEKDAQSWNAMIT 201

Query: 182 GLSGNGKIEKARVVFDRMPE-RNVVSWNAMITGYANNFRLGEAFDLFQRM 328
               NG++EKAR +FD MP  +NVVSW A+I+G   +    EA  LF  M
Sbjct: 202 AFIQNGELEKARKLFDEMPAGKNVVSWTAIISGLMQSGESEEALRLFYVM 251



 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 49/124 (39%), Positives = 75/124 (60%), Gaps = 1/124 (0%)
 Frame = +2

Query: 11  GRIDSALYLFEKMP-ERNVISWNKIITALSKCWRIEEACRFFDLMTERDVISWTAIIAGL 187
           G +  A  LF++   +++V++W  +I+   K  RI EA R F  M +++V++W  +I G 
Sbjct: 20  GLVKEARELFDRADAKKDVVTWTSMISGYLKSKRISEAERLFHAMPDKNVVTWNTMIDGY 79

Query: 188 SGNGKIEKARVVFDRMPERNVVSWNAMITGYANNFRLGEAFDLFQRMPERDLPSWNTMIT 367
             +G+IE A  VFD M ERNVVSWN +I+G  N  R+ EA   F R P +++ SW  MI+
Sbjct: 80  VRSGRIEHALTVFDEMGERNVVSWNTVISGLVNCGRIDEAMGFFSRTPLKNVISWTIMIS 139

Query: 368 GFIK 379
           G  +
Sbjct: 140 GLAR 143



 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 37/81 (45%), Positives = 60/81 (74%), Gaps = 1/81 (1%)
 Frame = +2

Query: 140 MTERDVISWTAIIAGLSGNGKIEKARVVFDRM-PERNVVSWNAMITGYANNFRLGEAFDL 316
           M +RDVISWTA+I+G    G +++AR +FDR   +++VV+W +MI+GY  + R+ EA  L
Sbjct: 1   MPDRDVISWTALISGYVKCGLVKEARELFDRADAKKDVVTWTSMISGYLKSKRISEAERL 60

Query: 317 FQRMPERDLPSWNTMITGFIK 379
           F  MP++++ +WNTMI G+++
Sbjct: 61  FHAMPDKNVVTWNTMIDGYVR 81



 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 44/113 (38%), Positives = 67/113 (59%), Gaps = 6/113 (5%)
 Frame = +2

Query: 2   AQNGRIDSALYLFEKMPERNVISWNKIITALSKCWRIEEACRFFDLMTE-RDVISWTAII 178
           AQN R+  A  LF+KMPE++  SWN +ITA  +   +E+A + FD M   ++V+SWTAII
Sbjct: 173 AQNTRLSEAYNLFKKMPEKDAQSWNAMITAFIQNGELEKARKLFDEMPAGKNVVSWTAII 232

Query: 179 AGLSGNGKIEKARVVFDRMPERNVVSWN----AMITGYANNFR-LGEAFDLFQ 322
           +GL  +G+ E+A  +F  M + + V  N    A + G  ++   LGE   + Q
Sbjct: 233 SGLMQSGESEEALRLFYVMNKSSKVKPNEATFASVLGACSDLAGLGEGMQVHQ 285