BLASTX nr result
ID: Paeonia22_contig00023999
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia22_contig00023999
(298 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004295870.1| PREDICTED: pentatricopeptide repeat-containi... 114 2e-23
ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containi... 113 2e-23
gb|EXB60277.1| hypothetical protein L484_005875 [Morus notabilis] 110 3e-22
ref|XP_006475804.1| PREDICTED: pentatricopeptide repeat-containi... 103 3e-20
ref|XP_006450982.1| hypothetical protein CICLE_v10010823mg [Citr... 103 3e-20
ref|XP_006425654.1| hypothetical protein CICLE_v10025166mg [Citr... 101 1e-19
gb|EMT15321.1| hypothetical protein F775_05476 [Aegilops tauschii] 101 1e-19
gb|EXB86239.1| hypothetical protein L484_005950 [Morus notabilis] 100 2e-19
gb|AEP33769.1| organelle transcript processing 82, partial [Olim... 100 2e-19
ref|XP_002866756.1| pentatricopeptide repeat-containing protein ... 100 2e-19
gb|ADE77588.1| unknown [Picea sitchensis] 100 2e-19
ref|XP_002310592.2| pentatricopeptide repeat-containing family p... 100 3e-19
ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containi... 100 3e-19
gb|ADE76509.1| unknown [Picea sitchensis] 100 3e-19
ref|XP_007030476.1| Tetratricopeptide repeat-like superfamily pr... 100 4e-19
ref|XP_006306854.1| hypothetical protein CARUB_v10008399mg [Caps... 100 4e-19
ref|NP_172286.1| chloroplast RNA editing factor [Arabidopsis tha... 100 4e-19
gb|AEP33773.1| organelle transcript processing 82, partial [Lobu... 100 4e-19
gb|AEP33761.1| organelle transcript processing 82, partial [Cruc... 100 4e-19
gb|AEP33758.1| organelle transcript processing 82, partial [Barb... 100 4e-19
>ref|XP_004295870.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Fragaria vesca subsp. vesca]
Length = 729
Score = 114 bits (284), Expect = 2e-23
Identities = 49/59 (83%), Positives = 55/59 (93%)
Frame = -2
Query: 297 LISTREGITIRVVKNLRVCNDCHDATKIISKIVEREIILRDRTRFHHFTDGRCSCNDYW 121
LIST G TIR+VKNLR+CNDCHDATK+ISKIVEREII+RDR+RFHHF DG+CSCNDYW
Sbjct: 671 LISTSPGTTIRIVKNLRICNDCHDATKLISKIVEREIIVRDRSRFHHFKDGKCSCNDYW 729
>ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 632
Score = 113 bits (283), Expect = 2e-23
Identities = 49/59 (83%), Positives = 55/59 (93%)
Frame = -2
Query: 297 LISTREGITIRVVKNLRVCNDCHDATKIISKIVEREIILRDRTRFHHFTDGRCSCNDYW 121
LI+T EG TIR+VKNLRVCNDCHDA KIISKIVEREI++RDR+RFHHF DG+CSCNDYW
Sbjct: 574 LINTSEGTTIRIVKNLRVCNDCHDAIKIISKIVEREIVVRDRSRFHHFKDGKCSCNDYW 632
>gb|EXB60277.1| hypothetical protein L484_005875 [Morus notabilis]
Length = 720
Score = 110 bits (274), Expect = 3e-22
Identities = 50/59 (84%), Positives = 53/59 (89%)
Frame = -2
Query: 297 LISTREGITIRVVKNLRVCNDCHDATKIISKIVEREIILRDRTRFHHFTDGRCSCNDYW 121
LIST EG TIRVVKNLRVC DCHDATKIISKIV REI++RDR+RFHHF GRCSCNDYW
Sbjct: 662 LISTIEGTTIRVVKNLRVCKDCHDATKIISKIVNREIVVRDRSRFHHFKYGRCSCNDYW 720
>ref|XP_006475804.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Citrus sinensis]
Length = 736
Score = 103 bits (256), Expect = 3e-20
Identities = 45/59 (76%), Positives = 49/59 (83%)
Frame = -2
Query: 297 LISTREGITIRVVKNLRVCNDCHDATKIISKIVEREIILRDRTRFHHFTDGRCSCNDYW 121
LIST+ G TIR+VKNLRVC +CH ATK+ISKI REII RDR RFHHF DG CSCNDYW
Sbjct: 678 LISTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGNCSCNDYW 736
>ref|XP_006450982.1| hypothetical protein CICLE_v10010823mg [Citrus clementina]
gi|557554208|gb|ESR64222.1| hypothetical protein
CICLE_v10010823mg [Citrus clementina]
Length = 736
Score = 103 bits (256), Expect = 3e-20
Identities = 45/59 (76%), Positives = 49/59 (83%)
Frame = -2
Query: 297 LISTREGITIRVVKNLRVCNDCHDATKIISKIVEREIILRDRTRFHHFTDGRCSCNDYW 121
LIST+ G TIR+VKNLRVC +CH ATK+ISKI REII RDR RFHHF DG CSCNDYW
Sbjct: 678 LISTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGNCSCNDYW 736
>ref|XP_006425654.1| hypothetical protein CICLE_v10025166mg [Citrus clementina]
gi|568824869|ref|XP_006466814.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g66520-like [Citrus sinensis]
gi|557527644|gb|ESR38894.1| hypothetical protein
CICLE_v10025166mg [Citrus clementina]
Length = 622
Score = 101 bits (252), Expect = 1e-19
Identities = 41/59 (69%), Positives = 49/59 (83%)
Frame = -2
Query: 297 LISTREGITIRVVKNLRVCNDCHDATKIISKIVEREIILRDRTRFHHFTDGRCSCNDYW 121
LI T G+TIR++KNLRVC DCH K+ISKI +REI++RDRTRFHHF DGRC+C DYW
Sbjct: 564 LIKTEPGVTIRIIKNLRVCEDCHTVMKLISKIYDREIVMRDRTRFHHFKDGRCTCGDYW 622
>gb|EMT15321.1| hypothetical protein F775_05476 [Aegilops tauschii]
Length = 542
Score = 101 bits (252), Expect = 1e-19
Identities = 42/59 (71%), Positives = 50/59 (84%)
Frame = -2
Query: 297 LISTREGITIRVVKNLRVCNDCHDATKIISKIVEREIILRDRTRFHHFTDGRCSCNDYW 121
L+ TR G T+RV KNLRVC DCH+ATK+IS++ EREI++RDR RFHHF DG CSCNDYW
Sbjct: 375 LLRTRPGDTMRVTKNLRVCRDCHEATKLISRVFEREIVVRDRNRFHHFRDGACSCNDYW 433
>gb|EXB86239.1| hypothetical protein L484_005950 [Morus notabilis]
Length = 737
Score = 100 bits (250), Expect = 2e-19
Identities = 44/59 (74%), Positives = 49/59 (83%)
Frame = -2
Query: 297 LISTREGITIRVVKNLRVCNDCHDATKIISKIVEREIILRDRTRFHHFTDGRCSCNDYW 121
LIST+ G TIR+VKNLRVC +CH ATK+ISKI REII RDR RFHHF +G CSCNDYW
Sbjct: 679 LISTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKNGSCSCNDYW 737
>gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 100 bits (250), Expect = 2e-19
Identities = 43/59 (72%), Positives = 50/59 (84%)
Frame = -2
Query: 297 LISTREGITIRVVKNLRVCNDCHDATKIISKIVEREIILRDRTRFHHFTDGRCSCNDYW 121
LIST+ G + +VKNLRVC +CH+ATK+ISKI +REII RDRTRFHHF DG CSCNDYW
Sbjct: 652 LISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGECSCNDYW 710
>ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297312591|gb|EFH43015.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 649
Score = 100 bits (250), Expect = 2e-19
Identities = 41/59 (69%), Positives = 50/59 (84%)
Frame = -2
Query: 297 LISTREGITIRVVKNLRVCNDCHDATKIISKIVEREIILRDRTRFHHFTDGRCSCNDYW 121
LI T+ G TIR++KNLRVC DCH TK+ISKI +R+I++RDRTRFHHF DG+CSC DYW
Sbjct: 591 LIKTKPGTTIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 649
>gb|ADE77588.1| unknown [Picea sitchensis]
Length = 312
Score = 100 bits (249), Expect = 2e-19
Identities = 44/59 (74%), Positives = 48/59 (81%)
Frame = -2
Query: 297 LISTREGITIRVVKNLRVCNDCHDATKIISKIVEREIILRDRTRFHHFTDGRCSCNDYW 121
LISTR G +IR+ KNLRVC DCH ATK ISKIV+REII+RD RFHHF DG CSC DYW
Sbjct: 254 LISTRSGTSIRITKNLRVCGDCHSATKFISKIVKREIIMRDLNRFHHFKDGLCSCGDYW 312
>ref|XP_002310592.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550334248|gb|EEE91042.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 785
Score = 100 bits (248), Expect = 3e-19
Identities = 42/59 (71%), Positives = 50/59 (84%)
Frame = -2
Query: 297 LISTREGITIRVVKNLRVCNDCHDATKIISKIVEREIILRDRTRFHHFTDGRCSCNDYW 121
+IST E T+R++KNLRVCNDCH+A K ISK+V+REII+RD TRFHHF DG CSC DYW
Sbjct: 727 IISTPENTTLRIMKNLRVCNDCHNAIKFISKLVDREIIVRDATRFHHFKDGSCSCKDYW 785
>ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 100 bits (248), Expect = 3e-19
Identities = 43/59 (72%), Positives = 48/59 (81%)
Frame = -2
Query: 297 LISTREGITIRVVKNLRVCNDCHDATKIISKIVEREIILRDRTRFHHFTDGRCSCNDYW 121
LIST+ G IR++KNLRVC +CH ATK+ISKI REII RDR RFHHF DG CSCNDYW
Sbjct: 676 LISTKPGTPIRIIKNLRVCRNCHSATKLISKIFNREIIARDRNRFHHFKDGSCSCNDYW 734
>gb|ADE76509.1| unknown [Picea sitchensis]
Length = 246
Score = 100 bits (248), Expect = 3e-19
Identities = 43/59 (72%), Positives = 48/59 (81%)
Frame = -2
Query: 297 LISTREGITIRVVKNLRVCNDCHDATKIISKIVEREIILRDRTRFHHFTDGRCSCNDYW 121
LIST G+ +R++KNLRVC DCH ATK ISKIVEREII+RD RFHHF DG CSC DYW
Sbjct: 188 LISTLPGLPVRIIKNLRVCGDCHTATKFISKIVEREIIIRDANRFHHFKDGLCSCGDYW 246
>ref|XP_007030476.1| Tetratricopeptide repeat-like superfamily protein, putative
[Theobroma cacao] gi|508719081|gb|EOY10978.1|
Tetratricopeptide repeat-like superfamily protein,
putative [Theobroma cacao]
Length = 783
Score = 99.8 bits (247), Expect = 4e-19
Identities = 45/59 (76%), Positives = 48/59 (81%)
Frame = -2
Query: 297 LISTREGITIRVVKNLRVCNDCHDATKIISKIVEREIILRDRTRFHHFTDGRCSCNDYW 121
LIST G IRVVKNLRVCNDCH ATK++SKI ER II+RDR RFHHF DG CSC DYW
Sbjct: 725 LISTAPGTPIRVVKNLRVCNDCHAATKLLSKIYERVIIVRDRKRFHHFRDGTCSCGDYW 783
>ref|XP_006306854.1| hypothetical protein CARUB_v10008399mg [Capsella rubella]
gi|482575565|gb|EOA39752.1| hypothetical protein
CARUB_v10008399mg [Capsella rubella]
Length = 740
Score = 99.8 bits (247), Expect = 4e-19
Identities = 43/59 (72%), Positives = 50/59 (84%)
Frame = -2
Query: 297 LISTREGITIRVVKNLRVCNDCHDATKIISKIVEREIILRDRTRFHHFTDGRCSCNDYW 121
LIST+ G + +VKNLRVC +CH+ATK+ISKI +REII RDRTRFHHF DG CSCNDYW
Sbjct: 682 LISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 740
>ref|NP_172286.1| chloroplast RNA editing factor [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g08070 gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15
[Arabidopsis thaliana] gi|332190118|gb|AEE28239.1|
chloroplast RNA editing factor [Arabidopsis thaliana]
Length = 741
Score = 99.8 bits (247), Expect = 4e-19
Identities = 43/59 (72%), Positives = 50/59 (84%)
Frame = -2
Query: 297 LISTREGITIRVVKNLRVCNDCHDATKIISKIVEREIILRDRTRFHHFTDGRCSCNDYW 121
LIST+ G + +VKNLRVC +CH+ATK+ISKI +REII RDRTRFHHF DG CSCNDYW
Sbjct: 683 LISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
>gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 99.8 bits (247), Expect = 4e-19
Identities = 43/59 (72%), Positives = 50/59 (84%)
Frame = -2
Query: 297 LISTREGITIRVVKNLRVCNDCHDATKIISKIVEREIILRDRTRFHHFTDGRCSCNDYW 121
LIST+ G + +VKNLRVC +CH+ATK+ISKI +REII RDRTRFHHF DG CSCNDYW
Sbjct: 637 LISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 695
>gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 99.8 bits (247), Expect = 4e-19
Identities = 43/59 (72%), Positives = 50/59 (84%)
Frame = -2
Query: 297 LISTREGITIRVVKNLRVCNDCHDATKIISKIVEREIILRDRTRFHHFTDGRCSCNDYW 121
LIST+ G + +VKNLRVC +CH+ATK+ISKI +REII RDRTRFHHF DG CSCNDYW
Sbjct: 652 LISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710
>gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 99.8 bits (247), Expect = 4e-19
Identities = 43/59 (72%), Positives = 50/59 (84%)
Frame = -2
Query: 297 LISTREGITIRVVKNLRVCNDCHDATKIISKIVEREIILRDRTRFHHFTDGRCSCNDYW 121
LIST+ G + +VKNLRVC +CH+ATK+ISKI +REII RDRTRFHHF DG CSCNDYW
Sbjct: 652 LISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710